NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|528474888|ref|XP_005164259|]
View 

AN1-type zinc finger protein 2A isoform X2 [Danio rerio]

Protein Classification

AN1-type zinc finger protein( domain architecture ID 10477484)

AN1-type zinc finger protein similar to plant zinc finger AN1 domain-containing stress-associated proteins that may be involved in environmental stress response

CATH:  4.10.1110.10
Gene Ontology:  GO:0008270
PubMed:  12665246|11179890|17210253
SCOP:  4003945

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
zf-AN1 pfam01428
AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in ...
 100-135 4.21e-11

AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues.


:

Pssm-ID: 460208  Cd Length: 37  Bit Score: 56.54  E-value: 4.21e-11
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 528474888  100 CSKGGCKQKEMIRVTCDQCHLNYCLKHRHPLDHDCK 135
Cdd:pfam01428   1 CSFKGCKKKDFLPFKCRFCGKNFCLKHRLPEDHDCS 36
zf-AN1 pfam01428
AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in ...
 10-46 2.62e-10

AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues.


:

Pssm-ID: 460208  Cd Length: 37  Bit Score: 54.62  E-value: 2.62e-10
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 528474888   10 CSEKSCKRLDFLPMKCDACEEIFCKDHITYANHKCTS 46
Cdd:pfam01428   1 CSFKGCKKKDFLPFKCRFCGKNFCLKHRLPEDHDCSG 37
 
Name Accession Description Interval E-value
zf-AN1 pfam01428
AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in ...
 100-135 4.21e-11

AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues.


Pssm-ID: 460208  Cd Length: 37  Bit Score: 56.54  E-value: 4.21e-11
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 528474888  100 CSKGGCKQKEMIRVTCDQCHLNYCLKHRHPLDHDCK 135
Cdd:pfam01428   1 CSFKGCKKKDFLPFKCRFCGKNFCLKHRLPEDHDCS 36
zf-AN1 pfam01428
AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in ...
 10-46 2.62e-10

AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues.


Pssm-ID: 460208  Cd Length: 37  Bit Score: 54.62  E-value: 2.62e-10
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 528474888   10 CSEKSCKRLDFLPMKCDACEEIFCKDHITYANHKCTS 46
Cdd:pfam01428   1 CSFKGCKKKDFLPFKCRFCGKNFCLKHRLPEDHDCSG 37
 
Name Accession Description Interval E-value
zf-AN1 pfam01428
AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in ...
 100-135 4.21e-11

AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues.


Pssm-ID: 460208  Cd Length: 37  Bit Score: 56.54  E-value: 4.21e-11
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 528474888  100 CSKGGCKQKEMIRVTCDQCHLNYCLKHRHPLDHDCK 135
Cdd:pfam01428   1 CSFKGCKKKDFLPFKCRFCGKNFCLKHRLPEDHDCS 36
zf-AN1 pfam01428
AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in ...
 10-46 2.62e-10

AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues.


Pssm-ID: 460208  Cd Length: 37  Bit Score: 54.62  E-value: 2.62e-10
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 528474888   10 CSEKSCKRLDFLPMKCDACEEIFCKDHITYANHKCTS 46
Cdd:pfam01428   1 CSFKGCKKKDFLPFKCRFCGKNFCLKHRLPEDHDCSG 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH