|
Name |
Accession |
Description |
Interval |
E-value |
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
350-559 |
2.39e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.70 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 350 ALVLLCVGSFFFSGSVFDLADDDFDGTELSDQELLDKLAQENKQINILEAQIESQKEELDQAlkmASQVHSTEKG--ALE 427
Cdd:COG4942 6 LLALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAAL---ARRIRALEQElaALE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 428 NENTKLKEQLSELPG-LKEELQMLRARVAELTKLTAEDLTQTIPDSDPPSTA-----------DSVPEEAEKHRDKKEEL 495
Cdd:COG4942 83 AELAELEKEIAELRAeLEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAvrrlqylkylaPARREQAEELRADLAEL 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 528509305 496 KRQKALLEESRKRLEGMKKpswNKQGLRESLVEMQKRLSKQVEQLGKREDWKRKHKKEWGRKKE 559
Cdd:COG4942 163 AALRAELEAERAELEALLA---ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE 223
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
382-590 |
1.31e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.53 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 382 ELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTEKGALENENTKLKEQLSELPGLKEELQMLRARVAELTKlt 461
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK-- 1458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 462 AEDLTQTipdSDPPSTADSVPEEAEKHRdKKEELKRQKallEESRKRLEGMKKPSWNKQGLRESLVEMQKRlskQVEQLG 541
Cdd:PTZ00121 1459 AEEAKKK---AEEAKKADEAKKKAEEAK-KADEAKKKA---EEAKKKADEAKKAAEAKKKADEAKKAEEAK---KADEAK 1528
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 528509305 542 KREDwkrKHKKEWGRKKEHDWKKDEAEKGKEWKHGKDKRKEHLMKYKEE 590
Cdd:PTZ00121 1529 KAEE---AKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEE 1574
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
386-590 |
2.36e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 2.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 386 KLAQENKQINILEAQIESQK-EELDQA--LKMASQVHSTEKGALENENTKLKEQLSElpglkEELQMLRARVAELTKLTA 462
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKaDELKKAeeLKKAEEKKKAEEAKKAEEDKNMALRKAE-----EAKKAEEARIEEVMKLYE 1602
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 463 EDLTQTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQVEQLGK 542
Cdd:PTZ00121 1603 EEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK 1682
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 528509305 543 REDWKRKHKKEWGRKKEHDWKKDEAEKGKEwkhgKDKRKEHLMKYKEE 590
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEA----EEKKKAEELKKAEE 1726
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
382-603 |
5.72e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 5.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 382 ELLDKLAQENKQINILEAQIESQKEELDQALKMASQvhstEKGALENENTKLKEQLSELPGLKEELQMLRARVAELTKLT 461
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEE----EKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 462 AEDLTQtipdsdppstADSVPEEAEKHRDKKEELKRQkallEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQVEQLg 541
Cdd:PTZ00121 1671 EEDKKK----------AEEAKKAEEDEKKAAEALKKE----AEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEA- 1735
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 528509305 542 KREDWKRKHKKEWGRKKEHDWKKDEAEKGKEWKHGKDKRKEHLMKYKEEWDLNKDERRQERE 603
Cdd:PTZ00121 1736 KKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVD 1797
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
356-553 |
1.59e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.98 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 356 VGSFFFSGSVFDLADDDFDGTELSDQELLDKLAQENKQINILEAQIESQKEELDQALKmasqvhstEKGALENENTKLKE 435
Cdd:COG3883 1 ALALALAAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQA--------ELEALQAEIDKLQA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 436 QLSElpgLKEELQMLRARVAELTK---------------LTAEDLT---------QTIPDSDpPSTADSVPEEAEKHRDK 491
Cdd:COG3883 73 EIAE---AEAEIEERREELGERARalyrsggsvsyldvlLGSESFSdfldrlsalSKIADAD-ADLLEELKADKAELEAK 148
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 528509305 492 KEELKRQKALLEESRKRLEGMKKpswNKQGLRESLVEMQKRLSKQVEQLGKREDWKRKHKKE 553
Cdd:COG3883 149 KAELEAKLAELEALKAELEAAKA---ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
369-590 |
2.44e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.30 E-value: 2.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 369 ADDDFDGTELSDQELLDKLAQENKQINILEAQIESQKEELDQALKMASQvhstEKGALENENTKLKEQLSELPGLKEELQ 448
Cdd:PTZ00121 1292 ADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEE----AKKAAEAAKAEAEAAADEAEAAEEKAE 1367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 449 MLRARVAELTKlTAEDLTQTipdSDPPSTADSVPEEAEKHRDKKEELKR---QKALLEESRKRLEGMKKPSWNKQGLRES 525
Cdd:PTZ00121 1368 AAEKKKEEAKK-KADAAKKK---AEEKKKADEAKKKAEEDKKKADELKKaaaAKKKADEAKKKAEEKKKADEAKKKAEEA 1443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 526 --LVEMQKR---------LSKQVEQLGKREDWKRK----HKKEWGRKKEHDWKK--DEAEKGKEWKHGKDKRKEHLMKYK 588
Cdd:PTZ00121 1444 kkADEAKKKaeeakkaeeAKKKAEEAKKADEAKKKaeeaKKADEAKKKAEEAKKkaDEAKKAAEAKKKADEAKKAEEAKK 1523
|
..
gi 528509305 589 EE 590
Cdd:PTZ00121 1524 AD 1525
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
381-589 |
2.93e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 381 QELLDKLAQENKQINILEAQIESQKEELDQA-----------------LKMASQVHSTEKGALENENTKLKEQLSELPGL 443
Cdd:TIGR02169 677 QRLRERLEGLKRELSSLQSELRRIENRLDELsqelsdasrkigeiekeIEQLEQEEEKLKERLEELEEDLSSLEQEIENV 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 444 KEELQMLRARVAELT------KLTAEDLTQTIPDSdppstadSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSW 517
Cdd:TIGR02169 757 KSELKELEARIEELEedlhklEEALNDLEARLSHS-------RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528509305 518 NKQGLRESLVEMQKRLSKQVEQLGKREDWKRKHKKEWGRK-KEHdwKKDEAEKGKEWKHGKDKRKEHLMKYKE 589
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEElEEL--EAALRDLESRLGDLKKERDELEAQLRE 900
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
381-510 |
8.33e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 8.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 381 QELLDKLAQENKQINILEAQIESQKEELDQaLKMASQVHstekgALENENTKLKEQLSELPG----LKEELQMLRARVAE 456
Cdd:COG4717 91 AELQEELEELEEELEELEAELEELREELEK-LEKLLQLL-----PLYQELEALEAELAELPErleeLEERLEELRELEEE 164
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 528509305 457 LTKLTAE-----DLTQTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLE 510
Cdd:COG4717 165 LEELEAElaelqEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELE 223
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
377-510 |
1.04e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.82 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 377 ELSDQELLDKLAQENKQINILEAQIESQKEELDQalkMASQVHSTEK--GALENENTKLKEQLSE----LPGLKEELQML 450
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEE---LSEELRELESkrSELRRELEELREKLAQlelrLEGLEVRIDNL 941
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528509305 451 RARVAELTKLTAEDLTQTIP--DSDPPSTADSV-----------------PEEAEKHRDKKEELKRQKALLEESRKRLE 510
Cdd:TIGR02168 942 QERLSEEYSLTLEEAEALENkiEDDEEEARRRLkrlenkikelgpvnlaaIEEYEELKERYDFLTAQKEDLTEAKETLE 1020
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
385-569 |
1.47e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.42 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 385 DKLAQENKQINILEAQIESQKEELDQAlkmasqvhSTEKGALENENTKLKEQLSELPG----LKEELQMLRARVAELTKL 460
Cdd:PRK02224 377 EAVEDRREEIEELEEEIEELRERFGDA--------PVDLGNAEDFLEELREERDELREreaeLEATLRTARERVEEAEAL 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 461 TAE----DLTQTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQ 536
Cdd:PRK02224 449 LEAgkcpECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAER 528
|
170 180 190
....*....|....*....|....*....|...
gi 528509305 537 VEQLGKREDwKRKHKKEwgRKKEHDWKKDEAEK 569
Cdd:PRK02224 529 RETIEEKRE-RAEELRE--RAAELEAEAEEKRE 558
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
381-572 |
1.95e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.01 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 381 QELLDKLAQENKQINILEAQIESQKE---ELDQALKMASQvhstEKGALENENTKLKEQL----SELPGLKEELQMLRAR 453
Cdd:TIGR04523 380 QSYKQEIKNLESQINDLESKIQNQEKlnqQKDEQIKKLQQ----EKELLEKEIERLKETIiknnSEIKDLTNQDSVKELI 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 454 VAELTKLTAEDLTQTIPDSDPPSTADSVPEEAEKHRDKKE----ELKRQKALLEESRKRLEGMKKPSWNKQglrESLVEM 529
Cdd:TIGR04523 456 IKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEkelkKLNEEKKELEEKVKDLTKKISSLKEKI---EKLESE 532
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 528509305 530 QKRLSKQVEQLGKREDWKRKHKKEWGRKKEHDWKKDEAEKGKE 572
Cdd:TIGR04523 533 KKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQ 575
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
381-569 |
2.28e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.66 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 381 QELLDKLAQENKQINILEAQIESQKEELDQA------LKMASQVHSTEKGALENENTKLKEQLSELPGLKEELQmlrARV 454
Cdd:TIGR02168 263 QELEEKLEELRLEVSELEEEIEELQKELYALaneisrLEQQKQILRERLANLERQLEELEAQLEELESKLDELA---EEL 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 455 AELTKLTAEDLTQtipdsdppstADSVPEEAEKHRDKKEELKRQKALLEESRKRLegmkkpswnkQGLRESLVEMQKRLS 534
Cdd:TIGR02168 340 AELEEKLEELKEE----------LESLEAELEELEAELEELESRLEELEEQLETL----------RSKVAQLELQIASLN 399
|
170 180 190
....*....|....*....|....*....|....*.
gi 528509305 535 KQVEQLGKR-EDWKRKHKKEWGRKKEHDWKKDEAEK 569
Cdd:TIGR02168 400 NEIERLEARlERLEDRRERLQQEIEELLKKLEEAEL 435
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
381-545 |
4.98e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 4.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 381 QELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTEKGALENENTKLKEQLSElpgLKEELQMLRARVAEL--- 457
Cdd:COG4913 298 EELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEE---RERRRARLEALLAALglp 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 458 TKLTAEDLTQTIpdSDPPSTADSVPEEAE-------KHRDKKEELKRQKALLEESRKRLEGMKKPswnkqgLRESLVEMQ 530
Cdd:COG4913 375 LPASAEEFAALR--AEAAALLEALEEELEaleealaEAEAALRDLRRELRELEAEIASLERRKSN------IPARLLALR 446
|
170
....*....|....*
gi 528509305 531 KRLSkqvEQLGKRED 545
Cdd:COG4913 447 DALA---EALGLDEA 458
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
384-551 |
1.02e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.58 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 384 LDKLAQENKQINILEAQIESQKEEL-------DQALKMASQVHSTEKGALENENTKLKEQLSELPGLkeELQMLRARVAE 456
Cdd:PRK01156 514 INKSINEYNKIESARADLEDIKIKInelkdkhDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISLI--DIETNRSRSNE 591
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 457 LTKLT--AEDLTQTI----PD--SDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVE 528
Cdd:PRK01156 592 IKKQLndLESRLQEIeigfPDdkSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKE 671
|
170 180 190
....*....|....*....|....*....|....
gi 528509305 529 MQKRLS------KQVEQ-----LGKREDWKRKHK 551
Cdd:PRK01156 672 ITSRINdiednlKKSRKalddaKANRARLESTIE 705
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
377-553 |
1.47e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.23 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 377 ELSDQELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTEKGALENENTKLKEQLSElpgLKEELQMLRARVAE 456
Cdd:COG1196 322 EEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL---AEELLEALRAAAEL 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 457 LTKLTAEDLTQtipdsdppstaDSVPEEAEKHRDKKEELKRQKALLEESRKRLEgmkkpswnkQGLRESLVEMQKRLSKQ 536
Cdd:COG1196 399 AAQLEELEEAE-----------EALLERLERLEEELEELEEALAELEEEEEEEE---------EALEEAAEEEAELEEEE 458
|
170
....*....|....*..
gi 528509305 537 VEQLGKREDWKRKHKKE 553
Cdd:COG1196 459 EALLELLAELLEEAALL 475
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
382-590 |
1.54e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.97 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 382 ELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTeKGALENENTKLKEQLSELPGLKEELQMLRARVAELtKLT 461
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREELEKLEKEVKELEEL-KEEIEELEKELESLEGSKRKLEEKIRELEERIEEL-KKE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 462 AEDLTQTIpdsdppstadsvpEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQVEQLG 541
Cdd:PRK03918 275 IEELEEKV-------------KELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE 341
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528509305 542 KREDWKRKHKKEWGRKKEHDW-------KKDEAEKGKEWKHGKDKRK-----EHLMKYKEE 590
Cdd:PRK03918 342 ELKKKLKELEKRLEELEERHElyeeakaKKEELERLKKRLTGLTPEKlekelEELEKAKEE 402
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
381-549 |
1.58e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 381 QELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTEKGAL------ENENTKLKEQLSEL-PGLKEELQMLRAR 453
Cdd:COG4942 79 AALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALllspedFLDAVRRLQYLKYLaPARREQAEELRAD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 454 VAELTKLTAEdltqtipdsdppstadsVPEEAEKHRDKKEELKRQKALLEESRK-RLEGMKKPSWNKQGLRESLVEMQK- 531
Cdd:COG4942 159 LAELAALRAE-----------------LEAERAELEALLAELEEERAALEALKAeRQKLLARLEKELAELAAELAELQQe 221
|
170 180
....*....|....*....|
gi 528509305 532 --RLSKQVEQLGKREDWKRK 549
Cdd:COG4942 222 aeELEALIARLEAEAAAAAE 241
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
444-590 |
2.15e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 444 KEELQMLRARVAELTKLTAEDLTQTIPDSDPPSTADSVPEEAEKHrdKKEELKR--QKALLEESRKRLEGMKKPSWNKQG 521
Cdd:PTZ00121 1246 EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKK--KADEAKKaeEKKKADEAKKKAEEAKKADEAKKK 1323
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528509305 522 LRESlvemqkrlSKQVEQLGKREDWKRkhKKEWGRKKEHDWKKDEAEKGKEWKHGKDKRKEHLMKYKEE 590
Cdd:PTZ00121 1324 AEEA--------KKKADAAKKKAEEAK--KAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADA 1382
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
387-572 |
3.01e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.10 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 387 LAQENKQINILEAQIESQKEELDQALKMASQVhstEKGALENENTKLKEQLSELPGLKEELQMLRARVAELTKLTAEdLT 466
Cdd:COG5185 372 LSKSSEELDSFKDTIESTKESLDEIPQNQRGY---AQEILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNE-LI 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 467 QTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGmkkpswNKQGLRESLVEMQKRLSKQVEQLGKREDW 546
Cdd:COG5185 448 SELNKVMREADEESQSRLEEAYDEINRSVRSKKEDLNEELTQIES------RVSTLKATLEKLRAKLERQLEGVRSKLDQ 521
|
170 180
....*....|....*....|....*.
gi 528509305 547 KRKHKKEWGRKKEHDWKKDEAEKGKE 572
Cdd:COG5185 522 VAESLKDFMRARGYAHILALENLIPA 547
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
367-540 |
3.13e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.08 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 367 DLADDDFDGTELSDQELLDKLAQENKQINILEAQIESQKEELDQAlkmasQVHSTEKGALENENTKLKEQLSElpGLKEE 446
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEEL-----ELELEEAQAEEYELLAELARLEQ--DIARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 447 LQMLRARVAELTKLTAEDLtqtipdsdppstadsvpEEAEKHRDKKEELKRQKALLEESRKRLEGMKKpswNKQGLRESL 526
Cdd:COG1196 308 EERRRELEERLEELEEELA-----------------ELEEELEELEEELEELEEELEEAEEELEEAEA---ELAEAEEAL 367
|
170
....*....|....
gi 528509305 527 VEMQKRLSKQVEQL 540
Cdd:COG1196 368 LEAEAELAEAEEEL 381
|
|
| PRK15422 |
PRK15422 |
septal ring assembly protein ZapB; Provisional |
381-457 |
3.21e-03 |
|
septal ring assembly protein ZapB; Provisional
Pssm-ID: 185320 [Multi-domain] Cd Length: 79 Bit Score: 36.99 E-value: 3.21e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528509305 381 QELLDKLAQENKQINILEAQIESQKEELDQalkMASQVHSTEKG--ALENENTKLKEQLSelpGLKEELQMLRARVAEL 457
Cdd:PRK15422 7 EKLEAKVQQAIDTITLLQMEIEELKEKNNS---LSQEVQNAQHQreELERENNHLKEQQN---GWQERLQALLGRMEEV 79
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
374-560 |
3.67e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 374 DGTELSDQELLDKLAQENKQINILEAQIEsqkeELDQALKMASQVHSTEKGALENENTKLKEQLSELPGLKEELQMLRAR 453
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIA----ELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE 741
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 454 VAELTKLtAEDLTQTIPDSDPPSTadSVPEEAEKHRDKKEELKRQKALLEESRKRLEGmkkpswNKQGLRESLVEMQKRL 533
Cdd:TIGR02168 742 VEQLEER-IAQLSKELTELEAEIE--ELEERLEEAEEELAEAEAEIEELEAQIEQLKE------ELKALREALDELRAEL 812
|
170 180
....*....|....*....|....*..
gi 528509305 534 SKQVEQLGKREDWKRKHKKEWGRKKEH 560
Cdd:TIGR02168 813 TLLNEEAANLRERLESLERRIAATERR 839
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
380-540 |
4.87e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 380 DQELLDKLAQENKQINILEAQIESQKEELDQA------LKMASQVHST--EKGALENENTKLKEQLSElpgLKEELQMLR 451
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAeaaleeFRQKNGLVDLseEAKLLLQQLSELESQLAE---ARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 452 ARVAELTKLTAEDLTQTIPDSDPPSTADSVPEEA--------------EKH------RDKKEELKRQkaLLEESRKRLEG 511
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAeleaelaelsarytPNHpdvialRAQIAALRAQ--LQQEAQRILAS 317
|
170 180
....*....|....*....|....*....
gi 528509305 512 MKKpswNKQGLRESLVEMQKRLSKQVEQL 540
Cdd:COG3206 318 LEA---ELEALQAREASLQAQLAQLEARL 343
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
382-572 |
6.36e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.12 E-value: 6.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 382 ELLDKLAQENKQINILEAQIESQKEELDQALKM--ASQVHSTEKGALENENTKLKEQL--SELPGLKEELQMLRA----- 452
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAeeENKIKAAEEAKKAEEDKKKAEEAkkAEEDEKKAAEALKKEaeeak 1702
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 453 RVAELTKLTAEDLTQtipdsdppstADSVPEEAEKHRDKKEELKRQ----KALLEESRKRLEGMKKPSWNKQGLRESLVE 528
Cdd:PTZ00121 1703 KAEELKKKEAEEKKK----------AEELKKAEEENKIKAEEAKKEaeedKKKAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 528509305 529 MQKRLSKQVEQLGKREDWKRKHKKEWGRKKEHDWKKDEAEKGKE 572
Cdd:PTZ00121 1773 IRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKE 1816
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
392-524 |
7.86e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 39.66 E-value: 7.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509305 392 KQINILEAQIESQKEELDQALKMASQVhstekgalENENTKLKEQLSELPGL--KEELQMLRARVAELTKLTAEDLTQTi 469
Cdd:PRK03918 612 KELEREEKELKKLEEELDKAFEELAET--------EKRLEELRKELEELEKKysEEEYEELREEYLELSRELAGLRAEL- 682
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 528509305 470 pdsdppstadsvpEEAEKHRDKK----EELKRQKALLEESRKRLEGMKKPSWNKQGLRE 524
Cdd:PRK03918 683 -------------EELEKRREEIkktlEKLKEELEEREKAKKELEKLEKALERVEELRE 728
|
|
| |
