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Conserved domains on  [gi|1622905469|ref|XP_002808376|]
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TPR and ankyrin repeat-containing protein 1 isoform X1 [Macaca mulatta]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
HelD super family cl28314
DNA helicase IV [Replication, recombination and repair];
1437-1633 3.67e-11

DNA helicase IV [Replication, recombination and repair];


The actual alignment was detected with superfamily member COG3973:

Pssm-ID: 443173 [Multi-domain]  Cd Length: 699  Bit Score: 69.12  E-value: 3.67e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469 1437 DEIQDFTQAELALLMKCIndPNSMF-LTGDTAQSImkgvaFRFSDLRSLfhyasrNTVDKQCaVRKPKKIHQLYQNYRSH 1515
Cdd:COG3973    476 DEAQDLSPMQWRVLKRRF--PSASFtIVGDLAQAI-----HPYRGAESW------EEVLEPL-GGDRARLVELTKSYRST 541
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469 1516 SGILNLASGVVDLLQF--YFPESFDRlprdsglfDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVI-------- 1585
Cdd:COG3973    542 AEIMEFANRVLRAAGPdlPPPESVRR--------HGEPPRVVRVPSEAELAAAVVEAVRELLAEGEGTIAVIcktareae 613
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622905469 1586 -----LVANETAKEKIPEELGLA---LVLTIYEAKGLEFDDVLLYNFftDSEAYKE 1633
Cdd:COG3973    614 alyaaLKAGLPVTLIDDESEELEagvVVLPAYLAKGLEFDAVVVVDP--DEIVYES 667
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
493-644 2.99e-10

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 64.20  E-value: 2.99e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  493 RLIDSGALPDGLQESQERPLVMCLKYEDFELAFLLLTKGADPRAISlTEGDTPLH-AALHIFLEIkadigfsfLNHLLDL 571
Cdd:COG0666    105 LLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQD-NDGNTPLHlAAANGNLEI--------VKLLLEA 175
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622905469  572 fwsnptefdYLNPNVQDSNGNTLMHILFQKGMLkrmkKLLDLLVKFDINFNLKNKEGKDARHRIKKNDSLLLA 644
Cdd:COG0666    176 ---------GADVNARDNDGETPLHLAAENGHL----EIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIV 235
ANKYR super family cl34000
Ankyrin repeat [Signal transduction mechanisms];
227-397 1.71e-08

Ankyrin repeat [Signal transduction mechanisms];


The actual alignment was detected with superfamily member COG0666:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 58.81  E-value: 1.71e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  227 PKLVQWLISIGASVETIGPYPLHALMRLciqARENHL--FRWLMDHKPEwkgrINQKDGDGCTVLHVVAAHspgylvkRQ 304
Cdd:COG0666    133 LEIVKLLLEAGADVNAQDNDGNTPLHLA---AANGNLeiVKLLLEAGAD----VNARDNDGETPLHLAAEN-------GH 198
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  305 TEDVQMLLRFGADPTLLDRQSRSVVDVLKRNKNFKAIEKINSHLEKLATcsKDLSGFSNGDGPTSENDIFRKVLEQLVKY 384
Cdd:COG0666    199 LEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNA--KDKDGLTALLLAAAAGAALIVKLLLLALL 276
                          170
                   ....*....|...
gi 1622905469  385 MNSGNRLLHKNFL 397
Cdd:COG0666    277 LLAAALLDLLTLL 289
NlpI super family cl34822
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
2-114 4.30e-06

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


The actual alignment was detected with superfamily member COG4785:

Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 50.30  E-value: 4.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469    2 WDPRAARMDLtayAELLKESGNQVLKNGNFSLAIRKYDEAIQIllqlyqwgVPprDLAVLLCNKSNAFFSLGKWNEAFVA 81
Cdd:COG4785     63 IDRALALPDL---AQLYYERGVAYDSLGDYDLAIADFDQALEL--------DP--DLAEAYNNRGLAYLLLGDYDAALED 129
                           90       100       110
                   ....*....|....*....|....*....|...
gi 1622905469   82 AKECLQWDPTYVKGYYRAGYSLLRLHQsYEAAR 114
Cdd:COG4785    130 FDRALELDPDYAYAYLNRGIALYYLGR-YELAI 161
 
Name Accession Description Interval E-value
HelD COG3973
DNA helicase IV [Replication, recombination and repair];
1437-1633 3.67e-11

DNA helicase IV [Replication, recombination and repair];


Pssm-ID: 443173 [Multi-domain]  Cd Length: 699  Bit Score: 69.12  E-value: 3.67e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469 1437 DEIQDFTQAELALLMKCIndPNSMF-LTGDTAQSImkgvaFRFSDLRSLfhyasrNTVDKQCaVRKPKKIHQLYQNYRSH 1515
Cdd:COG3973    476 DEAQDLSPMQWRVLKRRF--PSASFtIVGDLAQAI-----HPYRGAESW------EEVLEPL-GGDRARLVELTKSYRST 541
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469 1516 SGILNLASGVVDLLQF--YFPESFDRlprdsglfDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVI-------- 1585
Cdd:COG3973    542 AEIMEFANRVLRAAGPdlPPPESVRR--------HGEPPRVVRVPSEAELAAAVVEAVRELLAEGEGTIAVIcktareae 613
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622905469 1586 -----LVANETAKEKIPEELGLA---LVLTIYEAKGLEFDDVLLYNFftDSEAYKE 1633
Cdd:COG3973    614 alyaaLKAGLPVTLIDDESEELEagvVVLPAYLAKGLEFDAVVVVDP--DEIVYES 667
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
493-644 2.99e-10

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 64.20  E-value: 2.99e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  493 RLIDSGALPDGLQESQERPLVMCLKYEDFELAFLLLTKGADPRAISlTEGDTPLH-AALHIFLEIkadigfsfLNHLLDL 571
Cdd:COG0666    105 LLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQD-NDGNTPLHlAAANGNLEI--------VKLLLEA 175
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622905469  572 fwsnptefdYLNPNVQDSNGNTLMHILFQKGMLkrmkKLLDLLVKFDINFNLKNKEGKDARHRIKKNDSLLLA 644
Cdd:COG0666    176 ---------GADVNARDNDGETPLHLAAENGHL----EIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIV 235
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
227-397 1.71e-08

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 58.81  E-value: 1.71e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  227 PKLVQWLISIGASVETIGPYPLHALMRLciqARENHL--FRWLMDHKPEwkgrINQKDGDGCTVLHVVAAHspgylvkRQ 304
Cdd:COG0666    133 LEIVKLLLEAGADVNAQDNDGNTPLHLA---AANGNLeiVKLLLEAGAD----VNARDNDGETPLHLAAEN-------GH 198
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  305 TEDVQMLLRFGADPTLLDRQSRSVVDVLKRNKNFKAIEKINSHLEKLATcsKDLSGFSNGDGPTSENDIFRKVLEQLVKY 384
Cdd:COG0666    199 LEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNA--KDKDGLTALLLAAAAGAALIVKLLLLALL 276
                          170
                   ....*....|...
gi 1622905469  385 MNSGNRLLHKNFL 397
Cdd:COG0666    277 LLAAALLDLLTLL 289
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
2-114 4.30e-06

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 50.30  E-value: 4.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469    2 WDPRAARMDLtayAELLKESGNQVLKNGNFSLAIRKYDEAIQIllqlyqwgVPprDLAVLLCNKSNAFFSLGKWNEAFVA 81
Cdd:COG4785     63 IDRALALPDL---AQLYYERGVAYDSLGDYDLAIADFDQALEL--------DP--DLAEAYNNRGLAYLLLGDYDAALED 129
                           90       100       110
                   ....*....|....*....|....*....|...
gi 1622905469   82 AKECLQWDPTYVKGYYRAGYSLLRLHQsYEAAR 114
Cdd:COG4785    130 FDRALELDPDYAYAYLNRGIALYYLGR-YELAI 161
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
13-120 2.61e-05

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 49.98  E-value: 2.61e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   13 AYAELLKESGNQVLKNgnfslaiRKYDEAIQillqLYQWGVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTY 92
Cdd:TIGR00990  125 KYAAKLKEKGNKAYRN-------KDFNKAIK----LYSKAIECKPDPVYYSNRAACHNALGDWEKVVEDTTAALELDPDY 193
                           90       100
                   ....*....|....*....|....*...
gi 1622905469   93 VKgyyragySLLRLHQSYEAARMFFEGL 120
Cdd:TIGR00990  194 SK-------ALNRRANAYDGLGKYADAL 214
PHA03095 PHA03095
ankyrin-like protein; Provisional
224-395 2.24e-04

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 46.56  E-value: 2.24e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  224 EQVPKLVQWLISIGASVETI---GPYPLHALMRLCIQARenhLFRWLMDHKpewkGRINQKDGDGCTVLHVvaahspgYL 300
Cdd:PHA03095    60 EKVKDIVRLLLEAGADVNAPercGFTPLHLYLYNATTLD---VIKLLIKAG----ADVNAKDKVGRTPLHV-------YL 125
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  301 -VKRQTEDV-QMLLRFGADPTLLDRQSRSVVDVLKRNKNfkaiekINSHLEKLAtcskdlsgFSNGDGPTSENDIFRKVL 378
Cdd:PHA03095   126 sGFNINPKViRLLLRKGADVNALDLYGMTPLAVLLKSRN------ANVELLRLL--------IDAGADVYAVDDRFRSLL 191
                          170
                   ....*....|....*..
gi 1622905469  379 EQLVKYMNSGNRLLHKN 395
Cdd:PHA03095   192 HHHLQSFKPRARIVREL 208
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
30-118 2.14e-03

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 43.24  E-value: 2.14e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   30 NFSLAIRKYDEAIQIllqlyqwgVPPRdlAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTYVKGYYRAGYSLLRLHQs 109
Cdd:PLN03088    17 DFALAVDLYTQAIDL--------DPNN--AELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLEE- 85

                   ....*....
gi 1622905469  110 YEAARMFFE 118
Cdd:PLN03088    86 YQTAKAALE 94
Ank_2 pfam12796
Ankyrin repeats (3 copies);
227-322 3.15e-03

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 39.33  E-value: 3.15e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  227 PKLVQWLISIGASVETIGPYPLHALMrLCIQARENHLFRWLMDHkpewkGRINQKDgDGCTVLHVVAAHspgylvkRQTE 306
Cdd:pfam12796   10 LELVKLLLENGADANLQDKNGRTALH-LAAKNGHLEIVKLLLEH-----ADVNLKD-NGRTALHYAARS-------GHLE 75
                           90
                   ....*....|....*.
gi 1622905469  307 DVQMLLRFGADPTLLD 322
Cdd:pfam12796   76 IVKLLLEKGADINVKD 91
 
Name Accession Description Interval E-value
HelD COG3973
DNA helicase IV [Replication, recombination and repair];
1437-1633 3.67e-11

DNA helicase IV [Replication, recombination and repair];


Pssm-ID: 443173 [Multi-domain]  Cd Length: 699  Bit Score: 69.12  E-value: 3.67e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469 1437 DEIQDFTQAELALLMKCIndPNSMF-LTGDTAQSImkgvaFRFSDLRSLfhyasrNTVDKQCaVRKPKKIHQLYQNYRSH 1515
Cdd:COG3973    476 DEAQDLSPMQWRVLKRRF--PSASFtIVGDLAQAI-----HPYRGAESW------EEVLEPL-GGDRARLVELTKSYRST 541
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469 1516 SGILNLASGVVDLLQF--YFPESFDRlprdsglfDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVI-------- 1585
Cdd:COG3973    542 AEIMEFANRVLRAAGPdlPPPESVRR--------HGEPPRVVRVPSEAELAAAVVEAVRELLAEGEGTIAVIcktareae 613
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622905469 1586 -----LVANETAKEKIPEELGLA---LVLTIYEAKGLEFDDVLLYNFftDSEAYKE 1633
Cdd:COG3973    614 alyaaLKAGLPVTLIDDESEELEagvVVLPAYLAKGLEFDAVVVVDP--DEIVYES 667
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
493-644 2.99e-10

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 64.20  E-value: 2.99e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  493 RLIDSGALPDGLQESQERPLVMCLKYEDFELAFLLLTKGADPRAISlTEGDTPLH-AALHIFLEIkadigfsfLNHLLDL 571
Cdd:COG0666    105 LLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQD-NDGNTPLHlAAANGNLEI--------VKLLLEA 175
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622905469  572 fwsnptefdYLNPNVQDSNGNTLMHILFQKGMLkrmkKLLDLLVKFDINFNLKNKEGKDARHRIKKNDSLLLA 644
Cdd:COG0666    176 ---------GADVNARDNDGETPLHLAAENGHL----EIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIV 235
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
227-397 1.71e-08

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 58.81  E-value: 1.71e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  227 PKLVQWLISIGASVETIGPYPLHALMRLciqARENHL--FRWLMDHKPEwkgrINQKDGDGCTVLHVVAAHspgylvkRQ 304
Cdd:COG0666    133 LEIVKLLLEAGADVNAQDNDGNTPLHLA---AANGNLeiVKLLLEAGAD----VNARDNDGETPLHLAAEN-------GH 198
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  305 TEDVQMLLRFGADPTLLDRQSRSVVDVLKRNKNFKAIEKINSHLEKLATcsKDLSGFSNGDGPTSENDIFRKVLEQLVKY 384
Cdd:COG0666    199 LEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNA--KDKDGLTALLLAAAAGAALIVKLLLLALL 276
                          170
                   ....*....|...
gi 1622905469  385 MNSGNRLLHKNFL 397
Cdd:COG0666    277 LLAAALLDLLTLL 289
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
462-664 3.78e-07

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 54.57  E-value: 3.78e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  462 LIKDCNFSDLDICTIIPHLSTWDQRKKQLLGRLIDSGALPDGLQESQERPLVMCLKYEDFELAFLLLTKGADPRAISlTE 541
Cdd:COG0666     41 LLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARD-KD 119
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  542 GDTPLH-AALHIFLEIkadigfsfLNHLLDLfwsnptefdYLNPNVQDSNGNTLMHILFQKGMLkrmkKLLDLLVKFDIN 620
Cdd:COG0666    120 GETPLHlAAYNGNLEI--------VKLLLEA---------GADVNAQDNDGNTPLHLAAANGNL----EIVKLLLEAGAD 178
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1622905469  621 FNLKNKEGKDARHRIKKNDSLLLAwnKALME-----NRRRSRQDSAAHL 664
Cdd:COG0666    179 VNARDNDGETPLHLAAENGHLEIV--KLLLEagadvNAKDNDGKTALDL 225
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
2-114 4.30e-06

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 50.30  E-value: 4.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469    2 WDPRAARMDLtayAELLKESGNQVLKNGNFSLAIRKYDEAIQIllqlyqwgVPprDLAVLLCNKSNAFFSLGKWNEAFVA 81
Cdd:COG4785     63 IDRALALPDL---AQLYYERGVAYDSLGDYDLAIADFDQALEL--------DP--DLAEAYNNRGLAYLLLGDYDAALED 129
                           90       100       110
                   ....*....|....*....|....*....|...
gi 1622905469   82 AKECLQWDPTYVKGYYRAGYSLLRLHQsYEAAR 114
Cdd:COG4785    130 FDRALELDPDYAYAYLNRGIALYYLGR-YELAI 161
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
14-122 4.55e-06

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 50.78  E-value: 4.55e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   14 YAELLKESGNQVLKNGNFSLAIRKYDEAIQIllqlyqwgvpPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTYV 93
Cdd:COG0457      7 DAEAYNNLGLAYRRLGRYEEAIEDYEKALEL----------DPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDA 76
                           90       100
                   ....*....|....*....|....*....
gi 1622905469   94 KGYYRAGYSLLRLHQSYEAARMFFEGLRL 122
Cdd:COG0457     77 EALNNLGLALQALGRYEEALEDYDKALEL 105
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
227-342 6.84e-06

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 50.72  E-value: 6.84e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  227 PKLVQWLISIGASVETIGPYPLHALMrlcIQARENHL--FRWLMDHKPEwkgrINQKDGDGCTVLHVVAAhspgylvKRQ 304
Cdd:COG0666    100 LEIVKLLLEAGADVNARDKDGETPLH---LAAYNGNLeiVKLLLEAGAD----VNAQDNDGNTPLHLAAA-------NGN 165
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1622905469  305 TEDVQMLLRFGADPTLLDRQSRSVVDVLKRNKNFKAIE 342
Cdd:COG0666    166 LEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVK 203
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
13-120 2.61e-05

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 49.98  E-value: 2.61e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   13 AYAELLKESGNQVLKNgnfslaiRKYDEAIQillqLYQWGVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTY 92
Cdd:TIGR00990  125 KYAAKLKEKGNKAYRN-------KDFNKAIK----LYSKAIECKPDPVYYSNRAACHNALGDWEKVVEDTTAALELDPDY 193
                           90       100
                   ....*....|....*....|....*...
gi 1622905469   93 VKgyyragySLLRLHQSYEAARMFFEGL 120
Cdd:TIGR00990  194 SK-------ALNRRANAYDGLGKYADAL 214
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
11-137 9.21e-05

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 48.07  E-value: 9.21e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   11 LTAYAELLKESGN--QVLKN-GNFSLAIRKYDEAIQILLQLYQwgVPPrDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQ 87
Cdd:COG3914     98 LALYRRALALNPDnaEALFNlGNLLLALGRLEEALAALRRALA--LNP-DFAEAYLNLGEALRRLGRLEEAIAALRRALE 174
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1622905469   88 WDPTYVKGYYRAGYSLLRLHQsYEAARMFFEglRLVQRSQDQAPVADFLV 137
Cdd:COG3914    175 LDPDNAEALNNLGNALQDLGR-LEEAIAAYR--RALELDPDNADAHSNLL 221
PHA03095 PHA03095
ankyrin-like protein; Provisional
224-395 2.24e-04

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 46.56  E-value: 2.24e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  224 EQVPKLVQWLISIGASVETI---GPYPLHALMRLCIQARenhLFRWLMDHKpewkGRINQKDGDGCTVLHVvaahspgYL 300
Cdd:PHA03095    60 EKVKDIVRLLLEAGADVNAPercGFTPLHLYLYNATTLD---VIKLLIKAG----ADVNAKDKVGRTPLHV-------YL 125
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  301 -VKRQTEDV-QMLLRFGADPTLLDRQSRSVVDVLKRNKNfkaiekINSHLEKLAtcskdlsgFSNGDGPTSENDIFRKVL 378
Cdd:PHA03095   126 sGFNINPKViRLLLRKGADVNALDLYGMTPLAVLLKSRN------ANVELLRLL--------IDAGADVYAVDDRFRSLL 191
                          170
                   ....*....|....*..
gi 1622905469  379 EQLVKYMNSGNRLLHKN 395
Cdd:PHA03095   192 HHHLQSFKPRARIVREL 208
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
5-121 2.59e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 45.38  E-value: 2.59e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469    5 RAARMDLTaYAELLKESGNQVLKNGNFSLAIRKYDEAIQIllqlyqwgvpPRDLAVLLCNKSNAFFSLGKWNEAFVAAKE 84
Cdd:COG0457     67 QALELDPD-DAEALNNLGLALQALGRYEEALEDYDKALEL----------DPDDAEALYNLGLALLELGRYDEAIEAYER 135
                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1622905469   85 CLQWDPTYVKGYYRAGYSLLRLHQSYEAARMFFEGLR 121
Cdd:COG0457    136 ALELDPDDADALYNLGIALEKLGRYEEALELLEKLEA 172
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
13-140 3.37e-04

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 45.11  E-value: 3.37e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   13 AYAELLKESGN--QVLKN-GNFSLAIRKYDEAIQILLQLYQWGvppRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWD 89
Cdd:COG2956     98 LLEKLLELDPDdaEALRLlAEIYEQEGDWEKAIEVLERLLKLG---PENAHAYCELAELYLEQGDYDEAIEALEKALKLD 174
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1622905469   90 PTYVKGYYRAGYSLLRLHQsYEAARMFFEglRLVQRSQDQAPVADFLVGVF 140
Cdd:COG2956    175 PDCARALLLLAELYLEQGD-YEEAIAALE--RALEQDPDYLPALPRLAELY 222
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
3-122 4.09e-04

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 42.87  E-value: 4.09e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469    3 DPRAArmdLTAYAELLKESGNQV---LKNGNFSLAIRKYDEAIQILLQLYQwgVPPRDLAVLLcNKSNAFFSLGKWNEAF 79
Cdd:COG4783     19 DYDEA---EALLEKALELDPDNPeafALLGEILLQLGDLDEAIVLLHEALE--LDPDEPEARL-NLGLALLKAGDYDEAL 92
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1622905469   80 VAAKECLQWDPTYVKGYYRAGYSLLRLHQSYEAARMFFEGLRL 122
Cdd:COG4783     93 ALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALEL 135
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
14-122 5.84e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 44.23  E-value: 5.84e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   14 YAELLKESGNQVLKNGNFSLAIRKYDEAIQILLqlyqwgvpprDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTYV 93
Cdd:COG0457     41 DAEALYNLGLAYLRLGRYEEALADYEQALELDP----------DDAEALNNLGLALQALGRYEEALEDYDKALELDPDDA 110
                           90       100
                   ....*....|....*....|....*....
gi 1622905469   94 KGYYRAGYSLLRLHQSYEAARMFFEGLRL 122
Cdd:COG0457    111 EALYNLGLALLELGRYDEAIEAYERALEL 139
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
494-626 9.64e-04

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 44.17  E-value: 9.64e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  494 LIDSGALPDGLQESQERPLVMCLKYEDFELAFLLLTKGADPRAISlTEGDTPLHAALHiflEIKADIGFSFLNHLLDlfw 573
Cdd:COG0666    172 LLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKD-NDGKTALDLAAE---NGNLEIVKLLLEAGAD--- 244
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1622905469  574 snptefdylnPNVQDSNGNTLMHILFQKGMLKRMKKLLDLLVKFDINFNLKNK 626
Cdd:COG0666    245 ----------LNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLT 287
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
15-122 9.67e-04

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 42.10  E-value: 9.67e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   15 AELLKESGNQVLKNGNFSLAIRKYDEAIQILlqlyqwgvpPRDLAVLlCNKSNAFFSLGKWNEAFVAAKECLQWDPTYVK 94
Cdd:COG4783      4 AEALYALAQALLLAGDYDEAEALLEKALELD---------PDNPEAF-ALLGEILLQLGDLDEAIVLLHEALELDPDEPE 73
                           90       100
                   ....*....|....*....|....*...
gi 1622905469   95 GYYRAGYSLLRLHQSYEAARMFFEGLRL 122
Cdd:COG4783     74 ARLNLGLALLKAGDYDEALALLEKALKL 101
NrfG COG4235
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ...
10-133 1.40e-03

Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443378 [Multi-domain]  Cd Length: 131  Bit Score: 41.14  E-value: 1.40e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   10 DLTAYAELlkesGNQVLKNGNFSLAIRKYDEAIQILlqlyqwgvpPRDLAVLLcNKSNAFFSLGKWNEAFVAAKECLQWD 89
Cdd:COG4235     16 DAEGWLLL----GRAYLRLGRYDEALAAYEKALRLD---------PDNADALL-DLAEALLAAGDTEEAEELLERALALD 81
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1622905469   90 PTYVKGYYRAGYSLLRLHQsYEAARMFFEglRLVQRSQDQAPVA 133
Cdd:COG4235     82 PDNPEALYLLGLAAFQQGD-YAEAIAAWQ--KLLALLPADAPAR 122
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
279-364 2.05e-03

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 43.73  E-value: 2.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  279 NQKDGDGCTVLHVVAAHspGYLvkrqtEDVQMLLRFGADPTLLDRQSRSVVDVLKRNKNFKAIEKINSHleklatCSKDL 358
Cdd:PTZ00322   109 NCRDYDGRTPLHIACAN--GHV-----QVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH------SQCHF 175

                   ....*.
gi 1622905469  359 SGFSNG 364
Cdd:PTZ00322   176 ELGANA 181
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
30-118 2.14e-03

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 43.24  E-value: 2.14e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469   30 NFSLAIRKYDEAIQIllqlyqwgVPPRdlAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTYVKGYYRAGYSLLRLHQs 109
Cdd:PLN03088    17 DFALAVDLYTQAIDL--------DPNN--AELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLEE- 85

                   ....*....
gi 1622905469  110 YEAARMFFE 118
Cdd:PLN03088    86 YQTAKAALE 94
Ank_2 pfam12796
Ankyrin repeats (3 copies);
227-322 3.15e-03

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 39.33  E-value: 3.15e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469  227 PKLVQWLISIGASVETIGPYPLHALMrLCIQARENHLFRWLMDHkpewkGRINQKDgDGCTVLHVVAAHspgylvkRQTE 306
Cdd:pfam12796   10 LELVKLLLENGADANLQDKNGRTALH-LAAKNGHLEIVKLLLEH-----ADVNLKD-NGRTALHYAARS-------GHLE 75
                           90
                   ....*....|....*.
gi 1622905469  307 DVQMLLRFGADPTLLD 322
Cdd:pfam12796   76 IVKLLLEKGADINVKD 91
UvrD COG0210
Superfamily I DNA or RNA helicase [Replication, recombination and repair];
1437-1527 4.85e-03

Superfamily I DNA or RNA helicase [Replication, recombination and repair];


Pssm-ID: 439980 [Multi-domain]  Cd Length: 721  Bit Score: 42.62  E-value: 4.85e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622905469 1437 DEIQDFTQAELALLMKCINDPNSMFLTGDTAQSIMkgvAFRFSDLRSLFHYASRntvdkqcavRKPKKIHQLYQNYRSHS 1516
Cdd:COG0210    219 DEYQDTNPAQYELLRLLAGDGRNLCVVGDDDQSIY---GFRGADPENILRFEKD---------FPDAKVIKLEQNYRSTQ 286
                           90
                   ....*....|.
gi 1622905469 1517 GILNLASGVVD 1527
Cdd:COG0210    287 NILDAANAVIA 297
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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