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Conserved domains on  [gi|224115146|ref|XP_002316954|]
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indole-3-acetic acid-amido synthetase GH3.6 [Populus trichocarpa]

Protein Classification

GH3 auxin-responsive promoter family protein( domain architecture ID 10010842)

GH3 auxin-responsive promoter family protein such as Arabidopsis thaliana jasmonic acid-amido synthetase JAR1 and indole-3-acetic acid-amido synthetase GH3.10, which catalyze the synthesis of jasmonates-amino acid conjugates and indole-3-acetic acid (IAA)-amino acid conjugates, respectively

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 1-611 0e+00

indole-3-acetic acid-amido synthetase


:

Pssm-ID: 166261  Cd Length: 612  Bit Score: 1325.72  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146   1 MPEAPKNTLKPS-DYNLAEKNKKSLQFIEDVTSNADEAQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKVMPVINYE 79
Cdd:PLN02620   1 MPEAPKNSLLEVgDYNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  80 DIQPDINRIANGDASPILCSKPISEFLTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVPDLEKGKGMYFLFIK 159
Cdd:PLN02620  81 DIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 160 SEAKTPGGLVARPVLTSYYKSTHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 239
Cdd:PLN02620 161 SEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 240 RFLEKYWKFLANDIRTGIIDPQITDPSIREAVMKILKPDAKLADFIEAECSKESWQGIITRLWPNTKYVDVIVTGTMSQY 319
Cdd:PLN02620 241 RFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQY 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 320 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPICKPSEVSYTLIPTMAYFEFLPVNRNNGGINSVSRPKSLKEKEQQELVD 399
Cdd:PLN02620 321 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVD 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 400 LVDVKLDQEYELVVTTYAGLYRYRVGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLIPFDAT 479
Cdd:PLN02620 401 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAS 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 480 LAEYTSYADTTTIPGHYVLFWELSLSGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 559
Cdd:PLN02620 481 LTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560

                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 224115146 560 AISLGASINQYKTPRCVKFAPIVELLNSRAVSRYFSPKCPKWVPGHKQWNKN 611
Cdd:PLN02620 561 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHKQWCSN 612
 
Name Accession Description Interval E-value
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 1-611 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 1325.72  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146   1 MPEAPKNTLKPS-DYNLAEKNKKSLQFIEDVTSNADEAQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKVMPVINYE 79
Cdd:PLN02620   1 MPEAPKNSLLEVgDYNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  80 DIQPDINRIANGDASPILCSKPISEFLTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVPDLEKGKGMYFLFIK 159
Cdd:PLN02620  81 DIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 160 SEAKTPGGLVARPVLTSYYKSTHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 239
Cdd:PLN02620 161 SEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 240 RFLEKYWKFLANDIRTGIIDPQITDPSIREAVMKILKPDAKLADFIEAECSKESWQGIITRLWPNTKYVDVIVTGTMSQY 319
Cdd:PLN02620 241 RFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQY 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 320 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPICKPSEVSYTLIPTMAYFEFLPVNRNNGGINSVSRPKSLKEKEQQELVD 399
Cdd:PLN02620 321 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVD 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 400 LVDVKLDQEYELVVTTYAGLYRYRVGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLIPFDAT 479
Cdd:PLN02620 401 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAS 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 480 LAEYTSYADTTTIPGHYVLFWELSLSGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 559
Cdd:PLN02620 481 LTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560

                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 224115146 560 AISLGASINQYKTPRCVKFAPIVELLNSRAVSRYFSPKCPKWVPGHKQWNKN 611
Cdd:PLN02620 561 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHKQWCSN 612
GH3 pfam03321
GH3 auxin-responsive promoter;
26-578 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 751.35  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146   26 FIEDVTSNADEAQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKVMPVINYEDIQPDINRIANGDaSPILCSKPISEF 105
Cdd:pfam03321   1 EFEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEIKSAEDFKKRVPIVTYEDLEPYIERIANGE-PNILTSDPITWF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  106 LTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVpdlEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSTHFKD 185
Cdd:pfam03321  80 ALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPFLL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  186 RPydpytNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKYWKFLANDIRTGIIDPQI-TD 264
Cdd:pfam03321 157 KR-----LYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVInTD 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  265 PSIREAVMK-ILKPDAKLADFIEAECSKeSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECY 343
Cdd:pfam03321 232 PSLRLALSKrLLGPNPELADELEEECEK-GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGGLPLVSEGYAASEGF 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  344 FGVNLNPICKPsEVSYTLIPTMAYFEFLPVNRNNgginsvsrpkslKEKEQQELVDLVDVKLDQEYELVVTTYAGLYRYR 423
Cdd:pfam03321 311 FGINLDPLCPP-DVSYTLLPNSAYFEFIPVEEDE------------DEEENPETLDLVEVEVGKEYELVVTTYAGLYRYR 377

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  424 VGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLipFDATLAEYTSYADTT-TIPGHYVLFWEL 502
Cdd:pfam03321 378 IGDVVRVTGFYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKEL--TGAELVDFTSYADTSeSIPGHYVLFWEL 455

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 224115146  503 slsgSTPIPPSVFEDCCLTIEESL---NSVYRQGRvSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKF 578
Cdd:pfam03321 456 ----KDEPDLEVLEEFCKVLDESLqedNSDYRAKR-KDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNS 529
 
Name Accession Description Interval E-value
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 1-611 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 1325.72  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146   1 MPEAPKNTLKPS-DYNLAEKNKKSLQFIEDVTSNADEAQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKVMPVINYE 79
Cdd:PLN02620   1 MPEAPKNSLLEVgDYNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  80 DIQPDINRIANGDASPILCSKPISEFLTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVPDLEKGKGMYFLFIK 159
Cdd:PLN02620  81 DIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 160 SEAKTPGGLVARPVLTSYYKSTHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 239
Cdd:PLN02620 161 SEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 240 RFLEKYWKFLANDIRTGIIDPQITDPSIREAVMKILKPDAKLADFIEAECSKESWQGIITRLWPNTKYVDVIVTGTMSQY 319
Cdd:PLN02620 241 RFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQY 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 320 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPICKPSEVSYTLIPTMAYFEFLPVNRNNGGINSVSRPKSLKEKEQQELVD 399
Cdd:PLN02620 321 IPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVD 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 400 LVDVKLDQEYELVVTTYAGLYRYRVGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLIPFDAT 479
Cdd:PLN02620 401 LVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDAS 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 480 LAEYTSYADTTTIPGHYVLFWELSLSGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 559
Cdd:PLN02620 481 LTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDY 560

                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 224115146 560 AISLGASINQYKTPRCVKFAPIVELLNSRAVSRYFSPKCPKWVPGHKQWNKN 611
Cdd:PLN02620 561 AISLGASINQYKTPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHKQWCSN 612
PLN02249 PLN02249
indole-3-acetic acid-amido synthetase
 17-607 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 177891  Cd Length: 597  Bit Score: 844.33  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  17 AEKNKKSLQFIEDVTSNADEAQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKVMPVINYEDIQPDINRIANGDASPI 96
Cdd:PLN02249  17 SEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDRSPI 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  97 LCSKPISEFLTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVPDLEKGKGMYFLFIKSEAKTPGGLVARPVLTS 176
Cdd:PLN02249  97 LSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPALTS 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 177 YYKSTHFKDRPYDpyTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKYWKFLANDIRTG 256
Cdd:PLN02249 177 YYKSDHFRTSDYD--NVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTG 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 257 IIDPQITDPSIREAVMKIL-KPDAKLADFIEAECSKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCT 335
Cdd:PLN02249 255 TLSSKIFDPAIKNRMSKILnKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMAST 334

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 336 MYASSECYFGVNLNPICKPSEVSYTLIPTMAYFEFLPVNRN-NGGINSVSrpkslkekeqqeLVDLVDVKLDQEYELVVT 414
Cdd:PLN02249 335 IYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDgDGALDETS------------LVELADVEVGKEYELVIT 402

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 415 TYAGLYRYRVGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLIPFDATLAEYTSYADTTTIPG 494
Cdd:PLN02249 403 TYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPG 482

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 495 HYVLFWE-LSLSGSTPIPP-SVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKT 572
Cdd:PLN02249 483 HYVIYWElLGRDQSNALPSdEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKV 562

                        570       580       590
                 ....*....|....*....|....*....|....*
gi 224115146 573 PRCVKFAPIVELLNSRAVSRYFSPKCPKWVPGHKQ 607
Cdd:PLN02249 563 PRCVSLTPIMELLDSRVVSAHFSPSLPHWSPERRH 597
PLN02247 PLN02247
indole-3-acetic acid-amido synthetase
 20-603 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 165890  Cd Length: 606  Bit Score: 841.91  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  20 NKKSLQFIEDVTSNADEAQKKVLEEILSRNAHVEYLqRHGLNGQTNRETFKKVMPVINYEDIQPDINRIANGDASPILCS 99
Cdd:PLN02247  10 NEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYL-RSFLDGESDKQSFKNKVPVVNYEDIKPCIERIANGESSSIISA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 100 KPISEFLTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVPDLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYK 179
Cdd:PLN02247  89 QPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYK 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 180 STHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKYWKFLANDIRTGIID 259
Cdd:PLN02247 169 SSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVS 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 260 PQITDPSIREAVMKIL-KPDAKLADFIEAECSKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYA 338
Cdd:PLN02247 249 DWITDPSCRNAVSSILsKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYA 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 339 SSECYFGVNLNPICKPSEVSYTLIPTMAYFEFLPVNRNNGGI-----NSVSRPKSLKEKEQQELVDLVDVKLDQEYELVV 413
Cdd:PLN02247 329 SSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVihfvqCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVV 408

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 414 TTYAGLYRYRVGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLIPFDATLAEYTSYADTTTIP 493
Cdd:PLN02247 409 TTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSSIP 488

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146 494 GHYVLFWELSLSGSTPIP---PSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQY 570
Cdd:PLN02247 489 GHYVLFWELKTRGSNDPPeldPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQY 568

                        570       580       590
                 ....*....|....*....|....*....|...
gi 224115146 571 KTPRCVKFAPIVELLNSRAVSRYFSPKCPKWVP 603
Cdd:PLN02247 569 KTPRCIKSEEALKILDSRVIGRFFSKRVPFWEP 601
GH3 pfam03321
GH3 auxin-responsive promoter;
26-578 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 751.35  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146   26 FIEDVTSNADEAQKKVLEEILSRNAHVEYLQRHGLNGQTNRETFKKVMPVINYEDIQPDINRIANGDaSPILCSKPISEF 105
Cdd:pfam03321   1 EFEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEIKSAEDFKKRVPIVTYEDLEPYIERIANGE-PNILTSDPITWF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  106 LTSSGTSGGERKLMPTIVEELGRRSLLYSLLMPVMSQFVpdlEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSTHFKD 185
Cdd:pfam03321  80 ALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPFLL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  186 RPydpytNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKYWKFLANDIRTGIIDPQI-TD 264
Cdd:pfam03321 157 KR-----LYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVInTD 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  265 PSIREAVMK-ILKPDAKLADFIEAECSKeSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECY 343
Cdd:pfam03321 232 PSLRLALSKrLLGPNPELADELEEECEK-GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGGLPLVSEGYAASEGF 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  344 FGVNLNPICKPsEVSYTLIPTMAYFEFLPVNRNNgginsvsrpkslKEKEQQELVDLVDVKLDQEYELVVTTYAGLYRYR 423
Cdd:pfam03321 311 FGINLDPLCPP-DVSYTLLPNSAYFEFIPVEEDE------------DEEENPETLDLVEVEVGKEYELVVTTYAGLYRYR 377

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224115146  424 VGDVLRVVGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQSAVKNAVNHLipFDATLAEYTSYADTT-TIPGHYVLFWEL 502
Cdd:pfam03321 378 IGDVVRVTGFYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKEL--TGAELVDFTSYADTSeSIPGHYVLFWEL 455

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 224115146  503 slsgSTPIPPSVFEDCCLTIEESL---NSVYRQGRvSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKF 578
Cdd:pfam03321 456 ----KDEPDLEVLEEFCKVLDESLqedNSDYRAKR-KDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNS 529
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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