NCBI Conserved Domain Search

Conserved domains on [gi|109019585|ref|XP_001104412|]

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28S ribosomal protein S14, mitochondrial [Macaca mulatta]

Protein Classification

uS14 family ribosomal protein( domain architecture ID 10446592)

uS14 family ribosomal protein similar to Homo sapiens mitochondrial 28S ribosomal protein S14 and Saccharomyces cerevisiae mitochondrial 37S ribosomal protein MRP2

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

Ribosomal_S14

pfam00253

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...

74-126

1.33e-22

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.

Pssm-ID: 459734 Cd Length: 54 Bit Score: 83.61 E-value: 1.33e-22

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 109019585   74 EIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGIQRA 126
Cdd:pfam00253   1 KLQKLPRNSSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKA 53

Name

Accession

Description

Interval

E-value

Ribosomal_S14

pfam00253

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...

74-126

1.33e-22

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.

Pssm-ID: 459734 Cd Length: 54 Bit Score: 83.61 E-value: 1.33e-22

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 109019585   74 EIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGIQRA 126
Cdd:pfam00253   1 KLQKLPRNSSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKA 53

rpsN

PRK08881

30S ribosomal protein S14; Reviewed

36-128

2.75e-22

30S ribosomal protein S14; Reviewed

Pssm-ID: 181574 Cd Length: 101 Bit Score: 84.05 E-value: 2.75e-22

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109019585  36 RDVKRRKMAYEYADERLRINSLRKNTILPKILQDVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLA 115
Cdd:PRK08881   9 REKKRKKLVAKYAAKRAELKAIISDPNLSDEERYEARLKLQKLPRNSSPTRLRNRCELTGRPRGYYRKFGLSRIKLRELA 88

                         90
                 ....*....|...
gi 109019585 116 DHGQLSGIQRAMW 128
Cdd:PRK08881  89 HRGEIPGVVKASW 101

RpsN

COG0199

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...

84-128

2.95e-12

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit

Pssm-ID: 439969 Cd Length: 60 Bit Score: 57.33 E-value: 2.95e-12

                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 109019585  84 PVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGIQRAMW 128
Cdd:COG0199   16 PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60

Name

Accession

Description

Interval

E-value

Ribosomal_S14

pfam00253

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...

74-126

1.33e-22

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.

Pssm-ID: 459734 Cd Length: 54 Bit Score: 83.61 E-value: 1.33e-22

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 109019585   74 EIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGIQRA 126
Cdd:pfam00253   1 KLQKLPRNSSPTRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKA 53

rpsN

PRK08881

30S ribosomal protein S14; Reviewed

36-128

2.75e-22

30S ribosomal protein S14; Reviewed

Pssm-ID: 181574 Cd Length: 101 Bit Score: 84.05 E-value: 2.75e-22

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109019585  36 RDVKRRKMAYEYADERLRINSLRKNTILPKILQDVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLA 115
Cdd:PRK08881   9 REKKRKKLVAKYAAKRAELKAIISDPNLSDEERYEARLKLQKLPRNSSPTRLRNRCELTGRPRGYYRKFGLSRIKLRELA 88

                         90
                 ....*....|...
gi 109019585 116 DHGQLSGIQRAMW 128
Cdd:PRK08881  89 HRGEIPGVVKASW 101

rps14

CHL00074

ribosomal protein S14

36-128

8.39e-13

ribosomal protein S14

Pssm-ID: 214354 Cd Length: 100 Bit Score: 59.82 E-value: 8.39e-13

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109019585  36 RDVKRRKMAYEYADERLRI-NSLRKNTILPKILQdvADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHL 114
Cdd:CHL00074   9 REKKRQKLVQKYHLKRRSLkKEIKKVSSLSEKWE--IHGKLQSLPRNSAPTRLHNRCFLTGRPRGNYRDFGLSRHVLREM 86

                         90
                 ....*....|....
gi 109019585 115 ADHGQLSGIQRAMW 128
Cdd:CHL00074  87 AHACLLPGVTKSSW 100

RpsN

COG0199

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...

84-128

2.95e-12

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit

Pssm-ID: 439969 Cd Length: 60 Bit Score: 57.33 E-value: 2.95e-12

                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 109019585  84 PVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGIQRAMW 128
Cdd:COG0199   16 PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01