|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
35-577 |
7.91e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 7.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 35 ELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSAL 114
Cdd:COG1196 285 EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 115 NVQHQMLKSQHEELKKQHSDLEEEHRKQGEdfSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHT 194
Cdd:COG1196 365 EALLEAEAELAEAEEELEELAEELLEALRA--AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 195 QLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDTLNripslrkpdpAEQQNVTQVAHSPQGYNtarek 274
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA----------ARLLLLLEAEADYEGFL----- 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 275 ptQEVQEVSRNSDVWQNHEAIPGRAEDTKLYATTHKETEFQAPPEPVQQEVERREPEEHQVEEEHRKALEEEEMEQVGQA 354
Cdd:COG1196 508 --EGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRAR 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 355 EHLEEEHDPSPEEQDR----EWKEQHEQREAANLLEGHARAEVYPSAKPMIKFRSPYEEQLEQQRLAVQQAEEAQRLREH 430
Cdd:COG1196 586 AALAAALARGAIGAAVdlvaSDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGG 665
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 431 QEALHQQRLQGHLLRQQEQQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQLRQQAhydamdndivQGAEDQGIQ 510
Cdd:COG1196 666 SRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEAL----------EEQLEAERE 735
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 109064935 511 EEEGAYERDNQHQDEAEGDPGNRHEPREQGPREVDpESEADRAAVEDINPAddpnnqGEDEFEEAEQ 577
Cdd:COG1196 736 ELLEELLEEEELLEEEALEELPEPPDLEELERELE-RLEREIEALGPVNLL------AIEEYEELEE 795
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
344-597 |
2.20e-05 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 48.07 E-value: 2.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 344 EEEEMEQVGQAEHLEEEHDPSPEEQDREWKEQHEQ-------REAANLLEGHARAEVYPSAKPMIKFRSPYEEQLEQQRL 416
Cdd:TIGR00927 647 EEGERPTEAEGENGEESGGEAEQEGETETKGENESegeipaeRKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGT 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 417 AVQQAEEAQRLREHQEALHQQRLQGhllrqqeqQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQLRQQAHYDAM 496
Cdd:TIGR00927 727 EDEGEIETGEEGEEVEDEGEGEAEG--------KHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAE 798
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 497 DNDIVQGAEDQGIQEEEGAYERDNQHQDEAEGDPGNR------HEPREQGPREVDPESEADRAAVEDINPADDPNNQGED 570
Cdd:TIGR00927 799 GKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQelnaenQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEE 878
|
250 260
....*....|....*....|....*..
gi 109064935 571 EFEEAEQVREENLPDENEEQKQSNQKQ 597
Cdd:TIGR00927 879 EEEEEEEEEEENEEPLSLEWPETRQKQ 905
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
35-676 |
2.25e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 2.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 35 ELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEkslQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSAl 114
Cdd:PTZ00121 1358 EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE---AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKA- 1433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 115 nvqhQMLKSQHEELKKQhsdleEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHT 194
Cdd:PTZ00121 1434 ----DEAKKKAEEAKKA-----DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKK 1504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 195 QLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDTLNRIPSLRKPDPAEQQNVTQVAHSPQGYNTAREK 274
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAE 1584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 275 PTQEVQEVSRNSDVWQNHEAIPGRAEDTKlyatthKETEFQAPPEPVQQEVERREPEEHQveeehrKALEEEEMEQVGQA 354
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEEKKMKAEEAK------KAEEAKIKAEELKKAEEEKKKVEQL------KKKEAEEKKKAEEL 1652
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 355 EHLEEEHDPSPEEQDRewKEQHEQREAANLlegharaevypsakpmikfRSPYEEQLEQQRLAVQQAEEAQRLREHQEAL 434
Cdd:PTZ00121 1653 KKAEEENKIKAAEEAK--KAEEDKKKAEEA-------------------KKAEEDEKKAAEALKKEAEEAKKAEELKKKE 1711
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 435 HQQRLQGHLLRQQEQQQQQQQQQqqqqqqlAREMALQRQAKLEEGRPQHQEQLRQQAHYDAMDNDIVQGAEDQGIQEEEG 514
Cdd:PTZ00121 1712 AEEKKKAEELKKAEEENKIKAEE-------AKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE 1784
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 515 AYERDNQHQDEAE-------GDPGNRHEPREQGPREVDPESEADRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDEN 587
Cdd:PTZ00121 1785 LDEEDEKRRMEVDkkikdifDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDG 1864
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 588 EEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEqyqeeaeeevqedlteekkrELEHNAEETYGENDENADDKNDGEEQ 667
Cdd:PTZ00121 1865 NKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDI--------------------EREIPNNNMAGKNNDIIDDKLDKDEY 1924
|
....*....
gi 109064935 668 EVRDDNRPK 676
Cdd:PTZ00121 1925 IKRDAEETR 1933
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
504-691 |
2.46e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.13 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 504 AEDQGIQEEEGAYERDNQHQDEAEGDPGNRHEPREQGPREVDPESEADRAAVEDINPADDpNNQGEDEFEEAEQVREENl 583
Cdd:TIGR00927 701 AKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGD-RKETEHEGETEAEGKEDE- 778
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 584 pDENEEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELE-----HNAEETYGENDENA 658
Cdd:TIGR00927 779 -DEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNaenqgEAKQDEKGVDGGGG 857
|
170 180 190
....*....|....*....|....*....|...
gi 109064935 659 DDKNDGEEQEVRDDNRPKGREEHYEEEEEEEED 691
Cdd:TIGR00927 858 SDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEEN 890
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
35-577 |
7.91e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 7.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 35 ELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSAL 114
Cdd:COG1196 285 EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 115 NVQHQMLKSQHEELKKQHSDLEEEHRKQGEdfSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHT 194
Cdd:COG1196 365 EALLEAEAELAEAEEELEELAEELLEALRA--AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 195 QLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDTLNripslrkpdpAEQQNVTQVAHSPQGYNtarek 274
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA----------ARLLLLLEAEADYEGFL----- 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 275 ptQEVQEVSRNSDVWQNHEAIPGRAEDTKLYATTHKETEFQAPPEPVQQEVERREPEEHQVEEEHRKALEEEEMEQVGQA 354
Cdd:COG1196 508 --EGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRAR 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 355 EHLEEEHDPSPEEQDR----EWKEQHEQREAANLLEGHARAEVYPSAKPMIKFRSPYEEQLEQQRLAVQQAEEAQRLREH 430
Cdd:COG1196 586 AALAAALARGAIGAAVdlvaSDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGG 665
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 431 QEALHQQRLQGHLLRQQEQQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQLRQQAhydamdndivQGAEDQGIQ 510
Cdd:COG1196 666 SRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEAL----------EEQLEAERE 735
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 109064935 511 EEEGAYERDNQHQDEAEGDPGNRHEPREQGPREVDpESEADRAAVEDINPAddpnnqGEDEFEEAEQ 577
Cdd:COG1196 736 ELLEELLEEEELLEEEALEELPEPPDLEELERELE-RLEREIEALGPVNLL------AIEEYEELEE 795
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
30-590 |
1.83e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.48 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 30 AMLYYELQTQL--RKAEAVALKYQQHQ----------ESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFL-----VY 92
Cdd:COG1196 212 AERYRELKEELkeLEAELLLLKLRELEaeleeleaelEELEAELEELEAELAELEAELEELRLELEELELELEeaqaeEY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 93 KLEAQ-ETLNKGRQDSNSRYSALNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKyLQLQQEKEQELSKL 171
Cdd:COG1196 292 ELLAElARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEA-EAELAEAEEALLEA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 172 KETVYNLREENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDtlnripslrkpd 251
Cdd:COG1196 371 EAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE------------ 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 252 pAEQQNVTQVAHSPQGYNTAREKPTQEVQEVSRNSDVWQNHEAIPGRAEDTK---LYATTHKETEFQAPPEPVQQEVERR 328
Cdd:COG1196 439 -EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAaarLLLLLEAEADYEGFLEGVKAALLLA 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 329 EPEEHQVEEEHRKALEEEEMEQVGQAEHLEEEHDPSPEEQDREWKEQHEQREAAnlleghARAEVYPSAKpmikfrspyE 408
Cdd:COG1196 518 GLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKA------GRATFLPLDK---------I 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 409 EQLEQQRLAVQQAEEAQRLREHQEALHQQRLQGHLLRQQEQQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQLR 488
Cdd:COG1196 583 RARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSL 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 489 QQAHYDAMDNDIVQGAEDQGIQEEEGAYERDNQHQDEAEGDPGNRHEPREQGPREVDPESEADRAAVEDINPADDPNNQG 568
Cdd:COG1196 663 TGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELL 742
|
570 580
....*....|....*....|..
gi 109064935 569 EDEFEEAEQVREENLPDENEEQ 590
Cdd:COG1196 743 EEEELLEEEALEELPEPPDLEE 764
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
344-597 |
2.20e-05 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 48.07 E-value: 2.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 344 EEEEMEQVGQAEHLEEEHDPSPEEQDREWKEQHEQ-------REAANLLEGHARAEVYPSAKPMIKFRSPYEEQLEQQRL 416
Cdd:TIGR00927 647 EEGERPTEAEGENGEESGGEAEQEGETETKGENESegeipaeRKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGT 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 417 AVQQAEEAQRLREHQEALHQQRLQGhllrqqeqQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQLRQQAHYDAM 496
Cdd:TIGR00927 727 EDEGEIETGEEGEEVEDEGEGEAEG--------KHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAE 798
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 497 DNDIVQGAEDQGIQEEEGAYERDNQHQDEAEGDPGNR------HEPREQGPREVDPESEADRAAVEDINPADDPNNQGED 570
Cdd:TIGR00927 799 GKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQelnaenQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEE 878
|
250 260
....*....|....*....|....*..
gi 109064935 571 EFEEAEQVREENLPDENEEQKQSNQKQ 597
Cdd:TIGR00927 879 EEEEEEEEEEENEEPLSLEWPETRQKQ 905
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
35-676 |
2.25e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 2.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 35 ELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEkslQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSAl 114
Cdd:PTZ00121 1358 EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE---AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKA- 1433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 115 nvqhQMLKSQHEELKKQhsdleEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHT 194
Cdd:PTZ00121 1434 ----DEAKKKAEEAKKA-----DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKK 1504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 195 QLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDTLNRIPSLRKPDPAEQQNVTQVAHSPQGYNTAREK 274
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAE 1584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 275 PTQEVQEVSRNSDVWQNHEAIPGRAEDTKlyatthKETEFQAPPEPVQQEVERREPEEHQveeehrKALEEEEMEQVGQA 354
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEEKKMKAEEAK------KAEEAKIKAEELKKAEEEKKKVEQL------KKKEAEEKKKAEEL 1652
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 355 EHLEEEHDPSPEEQDRewKEQHEQREAANLlegharaevypsakpmikfRSPYEEQLEQQRLAVQQAEEAQRLREHQEAL 434
Cdd:PTZ00121 1653 KKAEEENKIKAAEEAK--KAEEDKKKAEEA-------------------KKAEEDEKKAAEALKKEAEEAKKAEELKKKE 1711
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 435 HQQRLQGHLLRQQEQQQQQQQQQqqqqqqlAREMALQRQAKLEEGRPQHQEQLRQQAHYDAMDNDIVQGAEDQGIQEEEG 514
Cdd:PTZ00121 1712 AEEKKKAEELKKAEEENKIKAEE-------AKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE 1784
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 515 AYERDNQHQDEAE-------GDPGNRHEPREQGPREVDPESEADRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDEN 587
Cdd:PTZ00121 1785 LDEEDEKRRMEVDkkikdifDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDG 1864
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 588 EEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEqyqeeaeeevqedlteekkrELEHNAEETYGENDENADDKNDGEEQ 667
Cdd:PTZ00121 1865 NKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDI--------------------EREIPNNNMAGKNNDIIDDKLDKDEY 1924
|
....*....
gi 109064935 668 EVRDDNRPK 676
Cdd:PTZ00121 1925 IKRDAEETR 1933
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
34-236 |
2.35e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 47.74 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 34 YELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQK--ERLEHKKAKEDFLVYKLEAQETlnkgrqdsnsRY 111
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEEleAQLEELESKLDELAEELAELEE----------KL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 112 SALNVQHQMLKSQHEELKKQHSDLE---EEHRKQGEDFSRTFNDHKQKYLQLQ---QEKEQELSKLKETVYNLREENRQL 185
Cdd:TIGR02168 347 EELKEELESLEAELEELEAELEELEsrlEELEEQLETLRSKVAQLELQIASLNneiERLEARLERLEDRRERLQQEIEEL 426
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 109064935 186 RKAHQ-----DIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQ 236
Cdd:TIGR02168 427 LKKLEeaelkELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
32-238 |
1.74e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 32 LYYELQTQLRKAEAvalkyQQHQESLSAQLQVVyehRSRLEKSlqKERLEHKKAKEDFLVYKLEAQETLNKgRQDSNSRY 111
Cdd:COG3206 160 AYLEQNLELRREEA-----RKALEFLEEQLPEL---RKELEEA--EAALEEFRQKNGLVDLSEEAKLLLQQ-LSELESQL 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 112 SALNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDfsRTFNDHKQKYLQLQQEKEQELSKLKE---TVYNLREENRQLRKA 188
Cdd:COG3206 229 AEARAELAEAEARLAALRAQLGSGPDALPELLQS--PVIQQLRAQLAELEAELAELSARYTPnhpDVIALRAQIAALRAQ 306
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 109064935 189 -HQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLK 238
Cdd:COG3206 307 lQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLE 357
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
121-606 |
4.10e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.98 E-value: 4.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 121 LKSQHEELKKQHSDLEE--EHRKQGEDFSRTFNDHKQKYLQLQQEK----EQELSKLKETVYNLREENRQLRKAhqdiht 194
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKkaEEAKKAAEAAKAEAEAAADEAEAAEEKaeaaEKKKEEAKKKADAAKKKAEEKKKA------ 1393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 195 qlQDVKQQHKNLLSEHEQLVVTLEDHKSAlAAAQTQVAEYKQLKDTLNRIPSLRKPDPAEQQnVTQVAHSPQGYNTAREK 274
Cdd:PTZ00121 1394 --DEAKKKAEEDKKKADELKKAAAAKKKA-DEAKKKAEEKKKADEAKKKAEEAKKADEAKKK-AEEAKKAEEAKKKAEEA 1469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 275 ptQEVQEVSRNSDVWQNHEAIPGRAEDTKLYA-TTHKETEFQAPPEPVQQEVERREPEEHQVEEEHRKALEEEEMEQVGQ 353
Cdd:PTZ00121 1470 --KKADEAKKKAEEAKKADEAKKKAEEAKKKAdEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKK 1547
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 354 AEHLEEEHDPSPEEQDREWKEQHEQREAANLLEGHARAEVYPSAKPMIKFRSPYEEQLEQQRLAVQQAEEAQRLREHQEA 433
Cdd:PTZ00121 1548 ADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 434 LHQQRLQGHLLRQQEQQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQLRQQAHYdamdndivQGAEDQGIQEEE 513
Cdd:PTZ00121 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE--------KKAAEALKKEAE 1699
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 514 GAYERDNQHQDEAEGDPGNRHEPREQGPREVDPEsEADRAAVEDINPADdpnnqgEDEFEEAEQVREENLPDENEEQKQS 593
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAE-EAKKEAEEDKKKAE------EAKKDEEEKKKIAHLKKEEEKKAEE 1772
|
490
....*....|...
gi 109064935 594 NQKQENTEVEEHL 606
Cdd:PTZ00121 1773 IRKEKEAVIEEEL 1785
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
32-644 |
4.14e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 32 LYYELQTQLRKAE---AVALKYQQHQESLsaqlqvvyEHRSRLEKSLQKERLEHKKAKEDflvyklEAQETLNKGRQDSN 108
Cdd:COG1196 194 ILGELERQLEPLErqaEKAERYRELKEEL--------KELEAELLLLKLRELEAELEELE------AELEELEAELEELE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 109 SRYSALNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDhkqkyLQLQQEKEQELSKLKETvynLREENRQLRKA 188
Cdd:COG1196 260 AELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQD-----IARLEERRRELEERLEE---LEEELAELEEE 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 189 HQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDTLNRipslrkpdpAEQQNVTQVAHSPQGY 268
Cdd:COG1196 332 LEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE---------ELLEALRAAAELAAQL 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 269 NTAREKPTQEVQEVSRNSDVWQNHEAIpgRAEDTKLYATTHKEtefqappepvQQEVERREPEEHQVEEEHRKALEEEEM 348
Cdd:COG1196 403 EELEEAEEALLERLERLEEELEELEEA--LAELEEEEEEEEEA----------LEEAAEEEAELEEEEEALLELLAELLE 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 349 EQVGQAEHLEEEHDPSPEEQDREWKEQHEQREAANLLEGHARAEVYPSAKP-------MIKFRSPYEEQLEQ------QR 415
Cdd:COG1196 471 EAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGlagavavLIGVEAAYEAALEAalaaalQN 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 416 LAVQQAEEAQRLREHQEALHQQRLQGHLLRQQEQQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQLRQQAHYDA 495
Cdd:COG1196 551 IVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAA 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 496 MDNDIVQGAEDQGIQEEEGAYERDNQHQDEAEGDPGNRHEPREQGPREVDPESEADRAAVEDINPADDpNNQGEDEFEEA 575
Cdd:COG1196 631 RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEA-LLAEEEEEREL 709
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 109064935 576 EQVREENLPDENEEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEQYQEEAEEEVQEDLtEEKKRELE 644
Cdd:COG1196 710 AEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELEREL-ERLEREIE 777
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
408-697 |
2.09e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 408 EEQLEQQRLAVQQAEEAQRLREHQEALHQQRLQGHLLRQQEQQQQQQQQQQQQQQQLAREMALQRQAKLEEGRPQHQEQL 487
Cdd:COG1196 250 ELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 488 RQQAHYDAMDNDIVQGAEDQGIQEEEGAyERDNQHQDEAEGDPGNRHEPREQGPREVDPESEADRAAVEDINPADDPNNQ 567
Cdd:COG1196 330 EELEELEEELEELEEELEEAEEELEEAE-AELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEA 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 568 GEDEFEEAEQVREENLPDENEEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELEHNA 647
Cdd:COG1196 409 EEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAE 488
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 109064935 648 EETYGENDENADDKNDGEEQEVRDDNRPKGREEHYEEEEEEEEDGAAVAE 697
Cdd:COG1196 489 AAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEA 538
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
504-691 |
2.46e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.13 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 504 AEDQGIQEEEGAYERDNQHQDEAEGDPGNRHEPREQGPREVDPESEADRAAVEDINPADDpNNQGEDEFEEAEQVREENl 583
Cdd:TIGR00927 701 AKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGD-RKETEHEGETEAEGKEDE- 778
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 584 pDENEEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELE-----HNAEETYGENDENA 658
Cdd:TIGR00927 779 -DEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNaenqgEAKQDEKGVDGGGG 857
|
170 180 190
....*....|....*....|....*....|...
gi 109064935 659 DDKNDGEEQEVRDDNRPKGREEHYEEEEEEEED 691
Cdd:TIGR00927 858 SDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEEN 890
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
465-678 |
3.75e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 40.66 E-value: 3.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 465 AREMALQRQAKLEEGRPQHQEQLRQQAHYDAMDNDIVQGAEDQGIQEEEGAyERDNQHQDEAEGDPGNRHEPREQGPREV 544
Cdd:PRK12678 81 ARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERR-ERGEAARRGAARKAGEGGEQPATEARAD 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 545 DPESEADRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDENEEQKQSNQKQENTEVEEHlvmagnpDQQEDNVDEQYQ 624
Cdd:PRK12678 160 AAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGR-------RDGGDRRGRRRR 232
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 109064935 625 EEAEEEVQEDLTEEKKRElehnaeetyGENDENADDKNDGEEQEVRDDNRPKGR 678
Cdd:PRK12678 233 RDRRDARGDDNREDRGDR---------DGDDGEGRGGRRGRRFRDRDRRGRRGG 277
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
35-257 |
8.49e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 39.65 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 35 ELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQEtLNKGRQDSNSRYSAL 114
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTL-LNEEAANLRERLESL 829
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 115 NVQHQMLKSQHEELKKQHSDLEEE------HRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKa 188
Cdd:TIGR02168 830 ERRIAATERRLEDLEEQIEELSEDieslaaEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES- 908
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 189 hqdihtQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAE-YKQLKDTLNRIPSLRKPDPAEQQN 257
Cdd:TIGR02168 909 ------KRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEeYSLTLEEAEALENKIEDDEEEARR 972
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
45-243 |
9.28e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 38.98 E-value: 9.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 45 AVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDflVYKLEAQ-ETLNKGRQDSNSRYSALNVQHQMLKS 123
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQ--LAALERRiAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 124 QHEELKKQHSDLEEEHRKQ------------------GEDFSRT---------FNDHKQKYLQLQQEKEQELSKLKETVY 176
Cdd:COG4942 91 EIAELRAELEAQKEELAELlralyrlgrqpplalllsPEDFLDAvrrlqylkyLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 109064935 177 NLREENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQlvvTLEDHKSALAAAQTQVAEYKQLKDTLNR 243
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEK---ELAELAAELAELQQEAEELEALIARLEA 234
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
73-246 |
9.74e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 39.23 E-value: 9.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 73 KSLQKERLEHKKAKEDFLVYKLEAQETLNKgrqdSNSRYSALNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDFSR--TF 150
Cdd:TIGR04523 127 NKLEKQKKENKKNIDKFLTEIKKKEKELEK----LNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKleLL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109064935 151 NDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQ 230
Cdd:TIGR04523 203 LSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKK 282
|
170
....*....|....*.
gi 109064935 231 VaeyKQLKDTLNRIPS 246
Cdd:TIGR04523 283 I---KELEKQLNQLKS 295
|
|
| |
