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Conserved domains on  [gi|109032770|ref|XP_001094038|]
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adhesion G-protein coupled receptor G7 isoform X1 [Macaca mulatta]

Protein Classification

adhesion G protein-coupled receptor( domain architecture ID 12027396)

adhesion G protein-coupled receptor (GPCR) is involved in cell adhesion and cell-cell interactions; GPCRs transmit physiological signals from the outside of the cell to the inside via G proteins by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
431-736 2.08e-149

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


:

Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 439.31  E-value: 2.08e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 431 PESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGIENSNKN-KTSDGDIHDIdfkN 509
Cdd:cd15257    1 AKTLDIISTIGCVLSIAGLVITIIFHLHTRKLRKSSVTWVLLNLCSSLLLFNIIFTSGVENTNNDyEISTVPDRET---N 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 510 NDVPQTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIY 589
Cdd:cd15257   78 TVLLSEEYVEPDTDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKPLPEMFILQASAIGWGIPAVVVAITLGATY 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 590 SQNGKNPQWELDYRQETICWLAIPEPDGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTsTKKVSSMRKI 669
Cdd:cd15257  158 RFPTSLPVFTRTYRQEEFCWLAALDKNFDIKKPLLWGFLLPVGLILITNVILFIMTSQKVLKKNNKKLT-TKKRSYMKKI 236
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 109032770 670 VSTLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLTL 736
Cdd:cd15257  237 YITVSVAVVFGITWILGYLMLVNNDLSKLVFSYIFCITNTTQGVQIFILYTWRTPEFRKLVSKLSLK 303
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
381-421 5.70e-15

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


:

Pssm-ID: 460350  Cd Length: 44  Bit Score: 69.26  E-value: 5.70e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 109032770  381 YACVYWNLS---TRDWDTYGCQKHKGTDGFLRCHCNHTTNFAVL 421
Cdd:pfam01825   1 PQCVFWDFTnstTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
 
Name Accession Description Interval E-value
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
431-736 2.08e-149

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 439.31  E-value: 2.08e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 431 PESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGIENSNKN-KTSDGDIHDIdfkN 509
Cdd:cd15257    1 AKTLDIISTIGCVLSIAGLVITIIFHLHTRKLRKSSVTWVLLNLCSSLLLFNIIFTSGVENTNNDyEISTVPDRET---N 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 510 NDVPQTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIY 589
Cdd:cd15257   78 TVLLSEEYVEPDTDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKPLPEMFILQASAIGWGIPAVVVAITLGATY 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 590 SQNGKNPQWELDYRQETICWLAIPEPDGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTsTKKVSSMRKI 669
Cdd:cd15257  158 RFPTSLPVFTRTYRQEEFCWLAALDKNFDIKKPLLWGFLLPVGLILITNVILFIMTSQKVLKKNNKKLT-TKKRSYMKKI 236
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 109032770 670 VSTLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLTL 736
Cdd:cd15257  237 YITVSVAVVFGITWILGYLMLVNNDLSKLVFSYIFCITNTTQGVQIFILYTWRTPEFRKLVSKLSLK 303
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
432-713 5.15e-38

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 142.03  E-value: 5.15e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770  432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTsVTWVLVNLCISMLIFNLLFVFGIENSnknktsdgdihdidFKNND 511
Cdd:pfam00002   2 LSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCT-RNYIHLNLFASFILRALLFLVGDAVL--------------FNKQD 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770  512 VPQTDTInipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGVIYSQ 591
Cdd:pfam00002  67 LDHCSWV-----GCKVVAVFLHYFFLANFFWMLVEGLYLYTLLVEVFFSERKYFWWYL-LIGWGVPALVVGIWAGVDPKG 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770  592 NGKNpqweldyrqeTICWLAIpepdgviKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIV- 670
Cdd:pfam00002 141 YGED----------DGCWLSN-------ENGLWWIIRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDLKQYRRLAk 203
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 109032770  671 STLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:pfam00002 204 STLLLLPLLGITWVFGLFAFNPENTLRVVFLYLFLILNSFQGF 246
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
381-421 5.70e-15

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 69.26  E-value: 5.70e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 109032770  381 YACVYWNLS---TRDWDTYGCQKHKGTDGFLRCHCNHTTNFAVL 421
Cdd:pfam01825   1 PQCVFWDFTnstTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
383-422 2.52e-10

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 56.24  E-value: 2.52e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 109032770   383 CVYWNLSTRDWDTYGCQKHKGTDGFLRCHCNHTTNFAVLM 422
Cdd:smart00303   5 CVFWDESSGEWSTRGCELLETNGTHTTCSCNHLTTFAVLM 44
 
Name Accession Description Interval E-value
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
431-736 2.08e-149

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 439.31  E-value: 2.08e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 431 PESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGIENSNKN-KTSDGDIHDIdfkN 509
Cdd:cd15257    1 AKTLDIISTIGCVLSIAGLVITIIFHLHTRKLRKSSVTWVLLNLCSSLLLFNIIFTSGVENTNNDyEISTVPDRET---N 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 510 NDVPQTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIY 589
Cdd:cd15257   78 TVLLSEEYVEPDTDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKPLPEMFILQASAIGWGIPAVVVAITLGATY 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 590 SQNGKNPQWELDYRQETICWLAIPEPDGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTsTKKVSSMRKI 669
Cdd:cd15257  158 RFPTSLPVFTRTYRQEEFCWLAALDKNFDIKKPLLWGFLLPVGLILITNVILFIMTSQKVLKKNNKKLT-TKKRSYMKKI 236
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 109032770 670 VSTLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLTL 736
Cdd:cd15257  237 YITVSVAVVFGITWILGYLMLVNNDLSKLVFSYIFCITNTTQGVQIFILYTWRTPEFRKLVSKLSLK 303
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
432-727 7.39e-77

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 249.03  E-value: 7.39e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGIENSNKNktsdgdihdidfknnd 511
Cdd:cd15040    2 KALSIITYIGCGLSLLGLLLTIITYILFRKLRKRKPTKILLNLCLALLLANLLFLFGINSTDNP---------------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 512 vpqtdtinipnPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIYSQ 591
Cdd:cd15040   66 -----------VLCTAVAALLHYFLLASFMWMLVEALLLYLRLVKVFGTYPRHFILKYALIGWGLPLIIVIITLAVDPDS 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 592 NGKNPQweldyrqetICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITIsIKVLWKNNQNLTSTKKVSSMRKIVS 671
Cdd:cd15040  135 YGNSSG---------YCWLS-------NGNGLYYAFLGPVLLIILVNLVIFVLV-LRKLLRLSAKRNKKKRKKTKAQLRA 197
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 109032770 672 TLSVAVVFGITWILAYLMLVNDdsiRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQ 727
Cdd:cd15040  198 AVSLFFLLGLTWIFGILAIFGA---RVVFQYLFAIFNSLQGFFIFIFHCLRNKEVR 250
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
432-724 1.45e-59

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 202.83  E-value: 1.45e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSvTWVLVNLCISMLIFNLLFVFGIENSNKNKTsdgdihdidfknnd 511
Cdd:cd13952    2 LALSIITYIGCSLSLVGLLLTIITYLLFPKLRNLR-GKILINLCLSLLLAQLLFLIGQLLTSSDRP-------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 512 vpqtdtinipnPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIYSQ 591
Cdd:cd13952   67 -----------VLCKALAILLHYFLLASFFWMLVEAFDLYRTFVKVFGSSERRRFLKYSLYGWGLPLLIVIITAIVDFSL 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 592 NGKNPqweldYRQETICWLAIPepdgvikSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIVS 671
Cdd:cd13952  136 YGPSP-----GYGGEYCWLSNG-------NALLWAFYGPVLLILLVNLVFFILTVRILLRKLRETPKQSERKSDRKQLRA 203
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 109032770 672 TLSVAVVFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTK 724
Cdd:cd13952  204 YLKLFPLMGLTWIFGILAPFVGGS--LVFWYLFDILNSLQGFFIFLIFCLKNK 254
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
434-723 1.95e-41

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 152.10  E-value: 1.95e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGiENSNKNKTSdgdihdidfknndvp 513
Cdd:cd15933    4 LSIISYIGCGISIACLALTLIIFLVLRVLSSDRFQ-IHKNLCVALLLAQILLLAG-EWAEGNKVA--------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIslIGWGVPAIVVAITVGVIYSqng 593
Cdd:cd15933   67 -----------CKVVAILLHFFFMAAFSWMLVEGLHLYLMIVKVFNYKSKMRYYYF--IGWGLPAIIVAISLAILFD--- 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 knpqwelDYRQETICWLAIpePDGVIkspllWSFIVPVTIILISNVVIFI-TISIKVLWKNNQNLTSTKKVSSMRKIVST 672
Cdd:cd15933  131 -------DYGSPNVCWLSL--DDGLI-----WAFVGPVIFIITVNTVILIlVVKITVSLSTNDAKKSQGTLAQIKSTAKA 196
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 109032770 673 LSVAV-VFGITWILAYLMLVnddSIRIIFSYIFCLFNTTQGLQIFFLHTVRT 723
Cdd:cd15933  197 SVVLLpILGLTWLFGVLVVN---SQTIVFQYIFVILNSLQGLMIFLFHCVLN 245
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
434-734 1.07e-40

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 150.11  E-value: 1.07e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALT-IVFQIVtRKVRKTSVTwVLVNLCISMLIFNLLFVFGIeNSNKNKTsdgdihdidfknndv 512
Cdd:cd15440    4 LTFITYIGCIISIVCLLLAfITFTCF-RNLQCDRNT-IHKNLCLCLLIAEIVFLLGI-DQTENRT--------------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 513 pqtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHfILFISLIGWGVPAIVVAITVGVIYSqn 592
Cdd:cd15440   66 -----------LCGVIAGLLHYFFLAAFSWMLLEGFQLYVMLVEVFEPEKSR-IKWYYLFGYGLPALIVAVSAGVDPT-- 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 593 gknpqwelDYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVViFITISIKVLWKNNQNLTSTKKVSSMRKIVST 672
Cdd:cd15440  132 --------GYGTEDHCWLS-------TENGFIWSFVGPVIVVLLANLV-FLGMAIYVMCRHSSRSASKKDASKLKNIRGW 195
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 109032770 673 L--SVAVVF--GITWILAYLMlVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVL 734
Cdd:cd15440  196 LkgSIVLVVllGLTWTFGLLF-INQES--IVMAYIFTILNSLQGLFIFIFHCVLNEKVRKELRRWL 258
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
432-713 5.15e-38

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 142.03  E-value: 5.15e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770  432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTsVTWVLVNLCISMLIFNLLFVFGIENSnknktsdgdihdidFKNND 511
Cdd:pfam00002   2 LSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCT-RNYIHLNLFASFILRALLFLVGDAVL--------------FNKQD 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770  512 VPQTDTInipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGVIYSQ 591
Cdd:pfam00002  67 LDHCSWV-----GCKVVAVFLHYFFLANFFWMLVEGLYLYTLLVEVFFSERKYFWWYL-LIGWGVPALVVGIWAGVDPKG 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770  592 NGKNpqweldyrqeTICWLAIpepdgviKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIV- 670
Cdd:pfam00002 141 YGED----------DGCWLSN-------ENGLWWIIRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDLKQYRRLAk 203
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 109032770  671 STLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:pfam00002 204 STLLLLPLLGITWVFGLFAFNPENTLRVVFLYLFLILNSFQGF 246
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
434-719 9.94e-38

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 142.11  E-value: 9.94e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGIENSNKNKTSdgdihdidfknndvp 513
Cdd:cd15997    4 LTLITYLGCGISSIFLGITLVTYLAFEKLRRDYPSKILINLCTALLMLNLVFLLNSWLSSFNNYG--------------- 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIYSQNG 593
Cdd:cd15997   69 ----------LCITVAAFLHYFLLASFTWMGLEAVHMYFALVKVFNIYIPNYILKFCIAGWGIPAVVVALVLAINKDFYG 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 KNPQWELDYRQETICWLAipepDGVIkspLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIVSTL 673
Cdd:cd15997  139 NELSSDSLHPSTPFCWIQ----DDVV---FYISVVAYFCLIFLCNISMFITVLIQIRSMKAKKPSRNWKQGFLHDLKSVA 211
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 109032770 674 SVAVVFGITWILAYLMLvndDSIRIIFSYIFCLFNTTQGLQIFFLH 719
Cdd:cd15997  212 SLTFLLGLTWGFAFFAW---GPVRIFFLYLFSICNTLQGFFIFVFH 254
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
434-721 4.29e-37

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 140.24  E-value: 4.29e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGIENSNKNKTSdgdihdidfknndvp 513
Cdd:cd15258    4 LTFISYVGCGISAIFLAITILTYIAFRKLRRDYPSKIHMNLCAALLLLNLAFLLSSWIASFGSDG--------------- 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGViySQNG 593
Cdd:cd15258   69 ----------LCIAVAVALHYFLLACLTWMGLEAFHLYLLLVKVFNTYIRRYILKLCLVGWGLPALLVTLVLSV--RSDN 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 KNPQWELDYRQET---ICWlaipepdgvIKSPLLWSFIVP--VTIILISNVVIFITISIKVLWKNNQNlTSTKKVSSMRK 668
Cdd:cd15258  137 YGPITIPNGEGFQndsFCW---------IRDPVVFYITVVgyFGLTFLFNMVMLATVLVQICRLREKA-QATPRKRALHD 206
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 109032770 669 IVSTLSVAVVFGITWILAYLMLVnddSIRIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15258  207 LLTLLGLTFLLGLTWGLAFFAWG---PFNLPFLYLFAIFNSLQGFFIFIWYCS 256
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
434-739 1.66e-33

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 129.88  E-value: 1.66e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGIENSNkNKTSdgdihdidfknndvp 513
Cdd:cd15438    4 LTLITKVGLSVSLFCLFLCILTFLFCRSIRGTRNT-IHLHLCLSLFLAHLIFLLGINNTN-NQVA--------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPL---PRHFIlfisLIGWGVPAIVVAITvGVIYS 590
Cdd:cd15438   67 -----------CAVVAGLLHYFFLAAFCWMSLEGVELYLMVVQVFNTQslkKRYLL----LIGYGVPLVIVAIS-AAVNS 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 QNgknpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITisikVLWKNNQNLTS-TKKVSSMRKI 669
Cdd:cd15438  131 KG---------YGTQRHCWLS-------LERGFLWSFLGPVCLIILVNAIIFVI----TVWKLAEKFSSiNPDMEKLRKI 190
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 109032770 670 VSTLSVAV----VFGITWILAYLMLvndDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLTLLSS 739
Cdd:cd15438  191 RALTITAIaqlcILGCTWIFGFFQF---SDSTLVMSYLFTILNSLQGLFIFLLHCLLSKQVREEYSRWLCAIAR 261
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
431-724 2.96e-31

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 123.13  E-value: 2.96e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 431 PESLDVFSNVGCALSITGLALTIVFQIVTRKVRkTSVTWVLVNLCISMLIFNLLFVFGIEnsnknktsdgdihdidfknn 510
Cdd:cd15441    1 VLLLKIVTYIGIGISLVLLVIAFLVLSCLRGLQ-SNSNSIHKNLVACLLLAELLFLLGIN-------------------- 59
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 511 dvpQTDTINIpnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRtMKPLPRHFILFISLIGWGVPAIVVAITVGVIYS 590
Cdd:cd15441   60 ---QTENLFP----CKLIAILLHYFYLSAFSWLLVESLHLYRMLTE-PRDINHGHMRFYYLLGYGIPAIIVGLSVGLRPD 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 QNGkNPQWeldyrqetiCWLAIPEpdgviksPLLWSFIVPVTIILISNVVIFITISIKVLWKNNqnlTSTKKVSSMRKIV 670
Cdd:cd15441  132 GYG-NPDF---------CWLSVNE-------TLIWSFAGPIAFVIVITLIIFILALRASCTLKR---HVLEKASVRTDLR 191
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 109032770 671 STLSVAVVFGITWILAYLMlVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTK 724
Cdd:cd15441  192 SSFLLLPLLGATWVFGLLA-VNEDS--ELLHYLFAGLNFLQGLFIFLFYCIFNK 242
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
434-719 1.29e-30

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 121.53  E-value: 1.29e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFgiensnknktsDGDIHDIDFKNndvp 513
Cdd:cd15996    4 LTFITYIGCGISAIFSAATLLTYIAFEKLRRDYPSKILMNLSTALLFLNLVFLL-----------DGWIASFEIDE---- 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIYSQNG 593
Cdd:cd15996   69 ----------LCITVAVLLHFFLLATFTWMGLEAIHMYIALVKVFNTYIRRYILKFCIIGWGLPALIVSIVLASTNDNYG 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 KNpQWELDYRQE---TICWlaipepdgvIKSPLLW--SFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRK 668
Cdd:cd15996  139 YG-YYGKDKDGQggdEFCW---------IKNPVVFyvTCAAYFGIMFLMNVAMFIVVMVQICGRNGKRSNRTLREEILRN 208
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 109032770 669 IVSTLSVAVVFGITWILAYLMLvndDSIRIIFSYIFCLFNTTQGLQIFFLH 719
Cdd:cd15996  209 LRSVVSLTFLLGMTWGFAFFAW---GPVNLAFMYLFTIFNSLQGLFIFVFH 256
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
433-735 3.29e-30

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 120.14  E-value: 3.29e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 433 SLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGIensnknktsdgdihdidfknndv 512
Cdd:cd15439    3 ALTVITYVGLIISLLCLFLAILTFLLCRSIRNTSTS-LHLQLSLCLFLADLLFLVGI----------------------- 58
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 513 PQTDtiniPNPTCTAIAALLHYFLLVTFTWSALNAAQLyFLLIRTMKPL-----PRHFILFISLIGWGVPAIVVAITVGV 587
Cdd:cd15439   59 DRTD----NKVLCSIIAGFLHYLFLACFAWMFLEAVHL-FLTVRNLKVVnyfssHRFKKRFMYPVGYGLPAVIVAISAAV 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 588 iysqngkNPQwelDYRQETICWLAiPEPDgvikspLLWSFIVPVTIILISNVVIFITIsikvLWKNNQNLTS-TKKVSSM 666
Cdd:cd15439  134 -------NPQ---GYGTPKHCWLS-MEKG------FIWSFLGPVCVIIVINLVLFCLT----LWILREKLSSlNAEVSTL 192
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 109032770 667 RK----IVSTLSVAVVFGITWILAYLMLvndDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLT 735
Cdd:cd15439  193 KNtrllTFKAIAQLFILGCTWILGLFQV---GPVATVMAYLFTITNSLQGVFIFLVHCLLNRQVREEYRRWIT 262
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
440-721 9.08e-28

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 113.38  E-value: 9.08e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 440 VGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGiensnknktsdgdihdidfknndvPQTDTIN 519
Cdd:cd15444   10 IGCGLSAIFLSVTLVTYIAFEKIRRDYPSKILIQLCVALLLLNLVFLLD------------------------SWIALYK 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 520 IPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVI-----YSQNGK 594
Cdd:cd15444   66 DIVGLCISVAVFLHYFLLVSFTWMGLEAFHMYLALVKVFNTYIRKYILKFCIVGWGVPAVVVAIVLAVSkdnygLGSYGK 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 595 NPQWELDyrqeTICWLAipePDGVIKSPLLWSFivpvTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIVSTLS 674
Cdd:cd15444  146 SPNGSTD----DFCWIN---NNIVFYITVVGYF----CVIFLLNISMFIVVLVQLCRIKKQKQLGAQRKTSLQDLRSVAG 214
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 109032770 675 VAVVFGITWILAYLMLvndDSIRIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15444  215 ITFLLGITWGFAFFAW---GPVNLAFMYLFAIFNTLQGFFIFIFYCV 258
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
434-734 1.83e-27

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 112.21  E-value: 1.83e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGIeNSNKNKTSdgdihdidfknndvp 513
Cdd:cd15252    4 LTRITQVGIIISLVCLAICIFTFWFFRGLQSDRTT-IHKNLCISLFLAELVFLIGI-NTTTNKIF--------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTM---KPLPRHFILFisliGWGVPAIVVAITVGVIYS 590
Cdd:cd15252   67 -----------CSVIAGLLHYFFLAAFAWMFIEGIQLYLMLVEVFeneGSRHKNFYIF----GYGSPAVIVGVSAALGYR 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 QngknpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRK-I 669
Cdd:cd15252  132 Y----------YGTTKVCWLS-------TENYFIWSFIGPATLIILLNLIFLGVAIYKMFRHTAGLKPEVSCLENIRSwA 194
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 109032770 670 VSTLSVAVVFGITWILAyLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVL 734
Cdd:cd15252  195 RGAIALLFLLGLTWIFG-VLHINHAS--VVMAYLFTVSNSLQGMFIFLFHCVLSRKVRKEYYKLF 256
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
434-727 1.07e-26

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 110.39  E-value: 1.07e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGIENSNKNKTsdgdihdidfknndvp 513
Cdd:cd15039    4 LGILTLIGLIISLVFLLLTLAVYALLPELRNLHGK-CLMCLVLSLFVAYLLLLIGQLLSSGDST---------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWsaLN--AAQLYFLLIRTMKPLP-----RHFILFiSLIGWGVPAIVVAITVG 586
Cdd:cd15039   67 ----------LCVALGILLHFFFLAAFFW--LNvmSFDIWRTFRGKRSSSSrskerKRFLRY-SLYAWGVPLLLVAVTII 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 587 VIYSQNGKNpqWELDYRqETICWlaipepdgvIKSP--LLWSFIVPVTIILISNVVIFI--TISIKVLWKNNQNLTSTKK 662
Cdd:cd15039  134 VDFSPNTDS--LRPGYG-EGSCW---------ISNPwaLLLYFYGPVALLLLFNIILFIltAIRIRKVKKETAKVQSRLR 201
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 109032770 663 vSSMRKIVSTLSVAVVFGITWILAYL-MLVNDDSiriIFSYIFCLFNTTQGLQIFFLHTVRTKIFQ 727
Cdd:cd15039  202 -SDKQRFRLYLKLFVIMGVTWILEIIsWFVGGSS---VLWYIFDILNGLQGVFIFLIFVCKRRVLR 263
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
432-721 1.62e-26

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 109.89  E-value: 1.62e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKT----SVTWVLVNLCISMLIFNLLFVFGIENSNKNKTSdgdihdidf 507
Cdd:cd15442    2 QTLVTISSAGCGVSMVFLIFTIILYFFLRFTYQKfkseDAPKIHVNLSSSLLLLNLAFLLNSGVSSRAHPG--------- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 508 knndvpqtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITvGV 587
Cdd:cd15442   73 ----------------LCKALGGVTHYFLLCCFTWMAIEAFHLYLLAIKVFNTYIHHYFAKLCLVGWGFPALVVTIT-GS 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 588 IYSQnGKNPQWELDYRQE-TICWlaipepdgvIKSPLLWSFIVPV----TIILISNVVIFITisikVLWKNNQNLTST-- 660
Cdd:cd15442  136 INSY-GAYTIMDMANRTTlHLCW---------INSKHLTVHYITVcgyfGLTFLFNTVVLGL----VAWKIFHLQSATag 201
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 109032770 661 -KKVSSMRKIVSTLSVAVVFGITWILAYLMLVnddSIRIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15442  202 kEKCQAWKGGLTVLGLSCLLGVTWGLAFFTYG---SMSVPTVYIFALLNSLQGLFIFIWFVI 260
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
434-734 1.51e-24

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 103.87  E-value: 1.51e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGIENSNKNKTsdgdihdidfknndvp 513
Cdd:cd16005    4 LDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNT-IHKNLCISLFVAELLFLIGINRTDQPIA---------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGVIYSQng 593
Cdd:cd16005   67 -----------CAVFAALLHFFFLAAFTWMFLEGVQLYIMLVEVFESEHSRRKYFY-LVGYGMPALIVAVSAAVDYRS-- 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 knpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNvVIFITISIKVLWKNNQNLTSTKKVSSMRK--IVS 671
Cdd:cd16005  133 --------YGTDKVCWLR-------LDTYFIWSFIGPATLIIMLN-VIFLGIALYKMFHHTAILKPESGCLDNIKswVIG 196
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 109032770 672 TLSVAVVFGITWILAyLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVL 734
Cdd:cd16005  197 AIALLCLLGLTWAFG-LMYINEST--VIMAYLFTIFNSLQGMFIFIFHCVLQKKVRKEYGKCL 256
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
434-732 3.20e-24

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 102.69  E-value: 3.20e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGIensnkNKTSdgdihdidfknndvp 513
Cdd:cd16006    4 LTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNT-IHKNLCINLFIAEFIFLIGI-----DKTE--------------- 62
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtiniPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKP-LPRHFILFISliGWGVPAIVVAITVGVIYSQn 592
Cdd:cd16006   63 -------YKIACPIFAGLLHFFFLAAFAWMCLEGVQLYLMLVEVFESeYSRKKYYYVA--GYLFPATVVGVSAAIDYKS- 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 593 gknpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIVS- 671
Cdd:cd16006  133 ---------YGTEKACWLR-------VDNYFIWSFIGPVTFIILLNLIFLVITLCKMVKHSNTLKPDSSRLENIKSWVLg 196
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 109032770 672 TLSVAVVFGITWILAyLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASK 732
Cdd:cd16006  197 AFALLCLLGLTWSFG-LLFINEET--IVMAYLFTIFNAFQGMFIFIFHCALQKKVRKEYSK 254
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
434-734 5.80e-24

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 101.92  E-value: 5.80e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVrKTSVTWVLVNLCISMLIFNLLFVFGIENSNknktsdgdihdidfknNDVp 513
Cdd:cd16007    4 LSVITWVGIVISLVCLAICISTFCFLRGL-QTDRNTIHKNLCINLFLAELLFLIGIDKTQ----------------YQI- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPlPRHFILFISLIGWGVPAIVVAITVGVIYSQng 593
Cdd:cd16007   66 ----------ACPIFAGLLHFFFLAAFSWLCLEGVQLYLMLVEVFES-EYSRKKYYYLCGYCFPALVVGISAAIDYRS-- 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 knpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVViFITISIKVLWKNNQNLTSTKKVSSMRKIVSTL 673
Cdd:cd16007  133 --------YGTEKACWLR-------VDNYFIWSFIGPVSFVIVVNLV-FLMVTLHKMIRSSSVLKPDSSRLDNIKSWALG 196
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 109032770 674 SVAVVF--GITWILAyLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVL 734
Cdd:cd16007  197 AITLLFllGLTWAFG-LLFINKES--VVMAYLFTTFNAFQGMFIFIFHCALQKKVHKEYSKCL 256
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
434-735 1.17e-23

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 101.08  E-value: 1.17e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRkTSVTWVLVNLCISMLIFNLLFVFGIEnsnknktsdgdihdidfknndvp 513
Cdd:cd15991    4 LKIITYTTVSLSLVALLITFILLVLIRTLR-SNLHSIHKNLVAALFFSELIFLIGIN----------------------- 59
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 QTDtinipNP-TCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRtMKPLPRHFILFISLIGWGVPAIVVAITVGViysqn 592
Cdd:cd15991   60 QTE-----NPfVCTVVAILLHYFYMSTFAWMFVEGLHIYRMLTE-VRNINTGHMRFYYVVGWGIPAIITGLAVGL----- 128
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 593 gkNPQwelDYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFItISIKVLWKNNQNLTSTKKVSSMRKIVST 672
Cdd:cd15991  129 --DPQ---GYGNPDFCWLS-------VQDTLIWSFAGPIGIVVIINTVIFV-LAAKASCGRRQRYFEKSGVISMLRTAFL 195
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 109032770 673 LSVAVvfGITWILAyLMLVNDDSIRiiFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLT 735
Cdd:cd15991  196 LLLLI--SATWLLG-LMAVNSDTLS--FHYLFAIFSCLQGIFIFFFHCIFNKEVRKHLKNVLT 253
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
434-716 1.28e-23

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 101.24  E-value: 1.28e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQ-IVTRKVRKTSVTWV----LVNLCISMLIFNLLFVFGiensnknktsdgdihdidfk 508
Cdd:cd15932    4 LDYITYVGLGISILSLVLCLIIEaLVWKSVTKNKTSYMrhvcLVNIALSLLIADIWFIIG-------------------- 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 509 nndvPQTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISL-IGWGVPAIVVAITVGV 587
Cdd:cd15932   64 ----AAISTPPNPSPACTAATFFIHFFYLALFFWMLTLGLLLFYRLVLVFHDMSKSTMMAIAFsLGYGCPLIIAIITVAA 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 588 IYSQNGknpqweldYRQETICWLaipepdGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMR 667
Cdd:cd15932  140 TAPQGG--------YTRKGVCWL------NWDKTKALLAFVIPALAIVVVNFIILIVVIFKLLRPSVGERPSKDEKNALV 205
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 109032770 668 KIVSTLSVAV-VFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIF 716
Cdd:cd15932  206 QIGKSVAILTpLLGLTWGFGLGTMIDPKS--LAFHIIFAILNSFQGFFIL 253
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
433-735 6.37e-23

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 99.13  E-value: 6.37e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 433 SLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSvTWVLVNLCISMLIFNLLFVFGIENSNkNKTSdgdihdidfknndv 512
Cdd:cd15931    3 FLEWINRVGVIVSLFCLGLAIFTFLLCRWIPKIN-TTAHLHLCLCLSMSHTLFLAGIEYVE-NELA-------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 513 pqtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKP-------LPRhfiLFISLIGWGVPAIVVAITv 585
Cdd:cd15931   67 ------------CTVMAGLLHYLFLASFVWMLLEALQLHLLVRRLTKVqviqrdgLPR---PLLCLIGYGVPFLIVGVS- 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 586 GVIYSQNgknpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITisikVLWKNNQNLTSTKKVSS 665
Cdd:cd15931  131 ALVYSDG---------YGEAKMCWLS-------QERGFNWSFLGPVIAIIGINWILFCA----TLWCLRQTLSNMNSDIS 190
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 109032770 666 MRKIVSTLSVA-----VVFGITWILAylmLVNDDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLT 735
Cdd:cd15931  191 QLKDTRLLTFKavaqlFILGCTWVLG---LFQTNPVALVFQYLFTILNSLQGAFLFLVHCLLNKEVREEYIKWLT 262
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
432-716 4.53e-22

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 96.75  E-value: 4.53e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFgiensnknktsdgdihdidfknnd 511
Cdd:cd15443    2 EPLTYISIVGCSISAAASLLTILLHFFSRKQPKDSTTRIHMNLLGSLFLLNGSFLL------------------------ 57
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 512 vpqTDTINIPNPT--CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIY 589
Cdd:cd15443   58 ---SPPLATSQSTwlCRAAAALLHYSLLCCLTWMAIEGFHLYLLLVKVYNIYIRRYVLKLCVLGWGLPALIVLLVLIFKR 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 590 SQNGK-NPQWELDYRQETICWlaipepdgvIKSPLLWSFIVP--VTIILISNVVIFITIsIKVLwknnQNLTSTKK---V 663
Cdd:cd15443  135 EAYGPhTIPTGTGYQNASMCW---------ITSSKVHYVLVLgyAGLTSLFNLVVLAWV-VRML----RRLRSRKQelgE 200
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 109032770 664 SSMRKIVSTLSVAVVFGITWILAYLMLvnddSIRIIFS-YIFCLFNTTQGLQIF 716
Cdd:cd15443  201 RARRDWVTVLGLTCLLGTTWALAFFSF----GVFLIPQlFLFTIINSLYGFFIC 250
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
434-736 5.03e-22

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 96.40  E-value: 5.03e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIvFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGIensnkNKTSdgdiHDIdfknndvp 513
Cdd:cd15436    4 LFVITWVGIVISLVCLLICI-FTFCFFRGLQTDRNTIHKNLCINLFIAELLFLIGI-----NRTQ----YTI-------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGVIYSqng 593
Cdd:cd15436   66 ----------ACPIFAGLLHFFFLAAFCWLCLEGVQLYLLLVEVFESEYSRRKYFY-LCGYSFPALVVAVSAAIDYR--- 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 knpqwelDYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRK-IVST 672
Cdd:cd15436  132 -------SYGTEKACWLR-------VDNYFIWSFIGPVTFVITLNLVFLVITLHKMVSHSDLLKPDSSRLDNIKSwALGA 197
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 109032770 673 LSVAVVFGITWILAyLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLTL 736
Cdd:cd15436  198 IALLFLLGLTWSFG-LMFINEES--VVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYSKCLRH 258
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
440-721 2.85e-21

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 93.86  E-value: 2.85e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 440 VGCALS-ITGLALTIVFQIVTRKVRkTSVTWVLVNLCISMLIFNLLFVFGiensnknktsdgdihdidfknndvpQTDTI 518
Cdd:cd15251   10 VGCGVScLALLTLLAIYAAFWRYIR-SERSIILINFCLSIISSNILILVG-------------------------QTQTL 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 519 NipNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKP-LPRHFILfisLIGWGVPAIVVAITVGVIYSQNgknpq 597
Cdd:cd15251   64 N--KGVCTMTAAFLHFFFLSSFCWVLTEAWQSYMAVTGRMRTrLIRKRFL---CLGWGLPALVVAVSVGFTRTKG----- 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 598 weldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNnqNLTStkkvSSMRKIVSTLSVAV 677
Cdd:cd15251  134 ----YGTSSYCWLS-------LEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRD--GISD----NAMASLWSSCVVLP 196
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 109032770 678 VFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15251  197 LLALTWMSAVLAMTDRRS--VLFQILFAVFDSLQGFVIVMVHCI 238
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
431-724 4.65e-21

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 93.35  E-value: 4.65e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 431 PESLDVFSNVGCALSItgLALTIVFQIVTRKVRkTSVTWVLVNLCISMLIFNLLFVFGIENSNknktsdgdihdidfknn 510
Cdd:cd15992    3 PLKTLTWSSVGVTLGF--LLLTFLFLLCLRALR-SNKTSIRKNGATALFLSELVFILGINQAD----------------- 62
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 511 dvpqtdtinipNP-TCTAIAALLHYFLLVTFTWSALNAAQLYFLL--IRTMKPLPRHFILfisLIGWGVPAIVVAITVGV 587
Cdd:cd15992   63 -----------NPfACTVIAILLHFFYLCTFSWLFLEGLHIYRMLseVRDINYGPMRFYY---LIGWGVPAFITGLAVGL 128
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 588 iysqngkNPQwelDYRQETICWLAIPEpdgviksPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTK-KVSSM 666
Cdd:cd15992  129 -------DPE---GYGNPDFCWLSIYD-------TLIWSFAGPVAFAVSMNVFLYILSSRASCSAQQQSFEKKKgPVSGL 191
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 109032770 667 RkivSTLSVAVVFGITWILAyLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTK 724
Cdd:cd15992  192 R---TAFTVLLLVSVTCLLA-LLSVNSDV--ILFHYLFAGFNCLQGPFIFLSHVVLLK 243
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
440-724 6.53e-21

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 93.21  E-value: 6.53e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 440 VGCALSITGLALTIVFQIV-TRKVRKTSVTW-VLVNLCISMLIFNLLFVFGIeNSNKNKtsdgdihdidfknndvpqtdt 517
Cdd:cd15259   10 AGAALCLLCLLATIITYIVfHRLIRISRKGRhMLVNLCLHLLLTCVVFVGGI-NRTANQ--------------------- 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 518 inipnPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMK--------PLPRHFILFISLIGWGVPAIVVAITVGViy 589
Cdd:cd15259   68 -----LVCQAVGILLHYSTLCTLLWVGVTARNMYKQVTKTAKppqdedqpPRPPKPMLRFYLIGWGIPLIICGITAAV-- 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 590 sqNGKNpqweldYRQETICWLAipepdgviKSPLLWSFIVPVTIILISNVVIFITISIKVlwknNQNLTSTKkvSSMRKI 669
Cdd:cd15259  141 --NLDN------YSTYDYCWLA--------WDPSLGAFYGPAALIVLVNCIYFLRIYCQL----KGAPVSFQ--SQLRGA 198
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 109032770 670 VSTLsvaVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTK 724
Cdd:cd15259  199 VITL---FLYVAMWACGALAVSQRYFLDLVFSCLYGATCSSLGLFVLIHHCLSRE 250
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
440-719 1.85e-20

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 92.71  E-value: 1.85e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 440 VGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGiensnknktsdgdihdidfknndvpQTDTIN 519
Cdd:cd15988   10 IGCAVSCMALLILLAIYAAFWRFIRSERSIILLNFCLSILASNILILVG-------------------------QSQTLS 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 520 ipNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKP-LPRHFILfisLIGWGVPAIVVAITVGVIYSQNgknpqw 598
Cdd:cd15988   65 --KGVCTMTAAFLHFFFLSSFCWVLTEAWQSYLAVIGRMRTrLVRKRFL---CLGWGLPALVVAVSVGFTRTKG------ 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 599 eldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKN------------------------- 653
Cdd:cd15988  134 ---YGTASYCWLS-------LEGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMSRDgisdkskkqragseaepcsslllkc 203
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 109032770 654 -------NQNLTSTKKVSSMRKIVSTLSVAVVFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLH 719
Cdd:cd15988  204 skcgvvsSAAMSSATASSAMASLWSSCVVLPLLALTWMSAVLAMTDRRS--ILFQVLFAVFNSVQGFVIITVH 274
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
433-715 2.09e-20

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 91.75  E-value: 2.09e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 433 SLDVFSNVGCALSITGLALTI-VFQIVTRKVRKTSVTW----VLVNLCISMLIFNLLFVFGIENSNKNKtsdgdihdidf 507
Cdd:cd15253    3 WLDFLSQVGLGASILALLLCLgIYRLVWRSVVRNKISYfrhmTLVNIAFSLLLADTCFLGATFLSAGHE----------- 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 508 knndvpqtdtinipNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFIL-FISLIGWGVPAIVVAITVG 586
Cdd:cd15253   72 --------------SPLCLAAAFLCHFFYLATFFWMLVQALMLFHQLLFVFHQLAKRSVLpLMVTLGYLCPLLIAAATVA 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 587 VIYSQNGknpqweldYRQETICWLaipepDGviKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSM 666
Cdd:cd15253  138 YYYPKRQ--------YLHEGACWL-----NG--ESGAIYAFSIPVLAIVLVNLLVLFVVLMKLMRPSVSEGPPPEERKAL 202
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 109032770 667 RKIVSTLSVAV-VFGITWILAYLMLVNDdsIRIIFSYIFCLFNTTQGLQI 715
Cdd:cd15253  203 LSIFKALLVLTpVFGLTWGLGVATLTGE--SSQVSHYGFAILNAFQGVFI 250
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
432-721 2.11e-20

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 91.44  E-value: 2.11e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVrKTSVTWVLVNLCISMLIFNLLFVFGIensnkNKTSDGDIhdidfknnd 511
Cdd:cd15993    2 ETLAIVTYSSVSASLAALVLTFSVLTCLRGL-KSNTRGIHSNIAAALFLSELLFLLGI-----NRTENQFL--------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 512 vpqtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYfllirTMKPLPRHF----ILFISLIGWGVPAIVVAITVGV 587
Cdd:cd15993   67 -------------CTVVAILLHYFFLSTFAWLFVQGLHIY-----RMQTEARNVnfgaMRFYYAIGWGVPAIITGLAVGL 128
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 588 iysqngkNPQwelDYRQETICWLAIPEpdgviksPLLWSFIVPVTIILISNVVIFITISiKVLWKNNQNltSTKKVSSMR 667
Cdd:cd15993  129 -------DPE---GYGNPDFCWISIHD-------KLVWSFAGPIVVVIVMNGVMFLLVA-RMSCSPGQK--ETKKTSVLM 188
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 109032770 668 KIVSTLSVAVVFGITWILAyLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15993  189 TLRSSFLLLLLISATWLFG-LLAVNNSV--LAFHYLHAILCCLQGLAVLLLFCV 239
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
434-729 3.58e-20

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 91.09  E-value: 3.58e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISMLIFNLLFVFGIeNSNKNKTsdgdihdidfknndvp 513
Cdd:cd15437    4 LTRITQLGIIISLICLSMCIFTFWFFSEIQSTRTT-IHKNLCCSLFLAELIFLIGI-NMNANKL---------------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKP---LPRHFILFisliGWGVPAIVVAITVGVIYS 590
Cdd:cd15437   66 ----------FCSIIAGLLHYFFLAAFAWMCIEGIHLYLIVVGVIYNkgfLHKNFYIF----GYGSPAVVVGISAALGYK 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 QngknpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLwknnQNLTSTK-KVSSMRKI 669
Cdd:cd15437  132 Y----------YGTTKVCWLS-------TENNFIWSFIGPACLIILVNLLAFGVIIYKVF----RHTAMLKpEVSCYENI 190
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 109032770 670 VS----TLSVAVVFGITWILAYLMLVNDDsirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTE 729
Cdd:cd15437  191 RScargALALLFLLGATWIFGVLHVVYGS---VVTAYLFTISNAFQGMFIFIFLCVLSRKIQEE 251
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
432-713 3.81e-19

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 88.05  E-value: 3.81e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISmLIFNLLFVFgiensnknktsdgdIHDIDFKNND 511
Cdd:cd15041    2 LVVYYIYLVGYSLSLVALLPAIVIFLYFRSLRCTRIR-LHINLFLS-FILRAVFWI--------------IWDLLVVYDR 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 512 --VPQTDTINIPNP-TCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGVI 588
Cdd:cd15041   66 ltSSGVETVLMQNPvGCKLLSVLKRYFKSANYFWMLCEGLYLHRLIVVAFFSEPSSLKLYY-AIGWGLPLVIVVIWAIVR 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 589 YSQNGKNpqweldyrqetiCWLAIPEpdgvikSPLLWSFIVPVTIILISNVVIFITIsIKVLWKNNQNlTSTKKVSSMRK 668
Cdd:cd15041  145 ALLSNES------------CWISYNN------GHYEWILYGPNLLALLVNLFFLINI-LRILLTKLRS-HPNAEPSNYRK 204
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 109032770 669 IV-STLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:cd15041  205 AVkATLILIPLFGIQYLLTIYRPPDGSEGELVYEYFNAILNSSQGF 250
7tmB2_GPR116_Ig-Hepta cd15254
The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family ...
431-727 1.14e-17

The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR116 (also known as Ig-hepta) is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR113, and GPR115. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR116 has four I-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. GPR116 is highly expressed in fetal and adult lung, and it has been shown to regulate lung surfactant levels as well as to stimulate breast cancer metastasis through a G(q)-p63-RhoGEF-Rho GTPase signaling pathway. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320382 [Multi-domain]  Cd Length: 275  Bit Score: 84.09  E-value: 1.14e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 431 PESLDVFSNVGCALSITGLALTIVFQ-IVTRKVRKTSVTWV----LVNLCISMLIFNLLFVFGIENSNKNKTSDGDIhdi 505
Cdd:cd15254    1 LDELDYITYIGLSISILSLAICIVIEsLVWKSVTKNRTSYMrhvcILNIAVSLLIADIWFIVVAAIQDQNYAVNGNV--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 506 dfknndvpqtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISL-IGWGVPAIVVAIT 584
Cdd:cd15254   78 -------------------CVAATFFIHFFYLCVFFWMLALGLMLFYRLVFILHDTSKTIQKAVAFcLGYGCPLIISVIT 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 585 VGVIYSQNGknpqweldYRQETICWLAIPEpdgvikSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVS 664
Cdd:cd15254  139 IAVTLPRDS--------YTRKKVCWLNWED------SKALLAFVIPALIIVAVNSIITVVVIVKILRPSIGEKPSKQERS 204
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 109032770 665 SMRKIVSTLSVAV-VFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQ 727
Cdd:cd15254  205 SLFQIIKSIGVLTpLLGLTWGFGLATVIKGSS--IVFHILFTLLNAFQGLFILVFGTLWDKKVQ 266
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
433-719 1.26e-16

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 80.74  E-value: 1.26e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 433 SLDVFSNVGCALSITGLALTIVFQIVTRKVR--KTSVTWVLVNLCISMLIFNLLFVFGIEnsnknktsdgdihdidFKNN 510
Cdd:cd15256    3 ALSSITYVGCSLSIFCLAITLVTFAVLSSVStiRNQRYHIHANLSFAVLVAQILLLISFR----------------FEPG 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 511 DVPqtdtinipnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTM-KPLPRHFILFisLIGWGVPAIVVAITVGVIY 589
Cdd:cd15256   67 TLP-----------CKIMAILLHFFFLSAFAWMLVEGLHLYSMVIKVFgSEESKHFYYY--GIGWGSPLLICIISLTSAL 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 590 SQNGKNPQweldyrqetiCWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKI 669
Cdd:cd15256  134 DSYGESDN----------CWLS-------LENGAIWAFVAPALFVIVVNIGILIAVTRVISRISADNYKVHGDANAFKLT 196
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 109032770 670 VSTLSVAV-VFGITWILAYLMlVNDDSirIIFSYIFCLFNTTQGLQIFFLH 719
Cdd:cd15256  197 AKAVAVLLpILGSSWVFGVLA-VNTHA--LVFQYMFAIFNSLQGFFIFLFH 244
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
440-721 3.56e-15

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 76.57  E-value: 3.56e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 440 VGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGiENSNKNKTsdgdihdidfknndvpqtdtin 519
Cdd:cd15990   13 VGCGVSSLTLLLLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIG-QTQTRNKV---------------------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 520 ipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKP--LPRHFIlfisLIGWGVPAIVVAITVGVIYSQNgknpq 597
Cdd:cd15990   70 ----VCTLVAAFLHFFFLSSFCWVLTEAWQSYMAVTGRLRNriIRKRFL----CLGWGLPALVVAISVGFTKAKG----- 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 598 weldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNnqNLTSTK-KVSSMRKIVSTLSVA 676
Cdd:cd15990  137 ----YGTVNYCWLS-------LEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKD--GITDKKlKERAGASLWSSCVVL 203
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 109032770 677 VVFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15990  204 PLLALTWMSAVLAITDRRS--ALFQILFAVFDSLEGFVIVMVHCI 246
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
381-421 5.70e-15

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 69.26  E-value: 5.70e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 109032770  381 YACVYWNLS---TRDWDTYGCQKHKGTDGFLRCHCNHTTNFAVL 421
Cdd:pfam01825   1 PQCVFWDFTnstTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
7tmB2_GPR56 cd15995
orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G ...
432-716 2.35e-14

orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR56 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320661  Cd Length: 269  Bit Score: 74.10  E-value: 2.35e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTWVLVNLCISMLIFNLLFVFGiensnknktsdgdihdidfknnd 511
Cdd:cd15995    2 HYLTILTYVGCIISALASVFTIAFYLCSRRKPRDYTIYVHMNLLLAIFLLDTSFLIS----------------------- 58
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 512 VPQTDTINipNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLIGWGVPAIVVAITVGVIYSQ 591
Cdd:cd15995   59 EPLALTGS--EAACRAGGMFLHFSLLACLTWMGIEGYNLYRLVVEVFNTYVPHFLLKLCAVGWGLPIFLVTLIFLVDQDN 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 592 NG-------KNPQwelDYRQETICWLAIPEPDGVIKSPLLwsfivpvTIILISNVVIFITISIKVlwknnqnLTSTKKVS 664
Cdd:cd15995  137 YGpiilavhRSPE---KVTYATICWITDSLISNITNLGLF-------SLVFLFNMAMLATMVVEI-------LRLRPRTH 199
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 109032770 665 SMRKIVSTLSVAVVFGITWILAYLMLVNdDSIRIIFSYIFCLFNTTQGLQIF 716
Cdd:cd15995  200 KWSHVLTLLGLSLVLGIPWALAFFSFAS-GTFQLVIVYLFTIINSLQGFLIF 250
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
440-727 9.34e-14

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 72.79  E-value: 9.34e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 440 VGCALSITGL-ALTIVFQIVTRKVRkTSVTWVLVNLCISMLIFNLLFVFGiensnknktsdgdihdidfknndvpQTDTI 518
Cdd:cd15989   12 VGCGLSCLALiTLAVVYAALWRYIR-SERSIILINFCLSIISSNILILVG-------------------------QTQTH 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 519 NipNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLL---IRTMKPLPRHFILfisliGWGVPAIVVAITVGVIYSQNgkn 595
Cdd:cd15989   66 N--KGICTMTTAFLHFFFLASFCWVLTEAWQSYMAVtgkIRTRLIRKRFLCL-----GWGLPALVVAISMGFTKAKG--- 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 596 pqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKN---------------------- 653
Cdd:cd15989  136 ------YGTPHYCWLS-------LEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDgildkklkhragqmsephsglt 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 654 ----------NQNLTSTKKVSSMRKIVSTLSVAVVFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTVRT 723
Cdd:cd15989  203 lkcakcgvvsTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRS--ILFQILFAVFDSLQGFVIVMVHCILR 280

                 ....
gi 109032770 724 KIFQ 727
Cdd:cd15989  281 REVQ 284
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
434-721 1.15e-13

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 71.79  E-value: 1.15e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQ-IVTRKVRKTSVTWV----LVNLCISMLIFNLLFVFGIENSNKNKTsdgdihdidfk 508
Cdd:cd15994    4 LDYITRIGLGLSIFSLALCLTIEaVVWSHVTKTEITYMrhvcIVNIATSLLIADVWFILASIVHNTALN----------- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 509 nndvpqtdtinipNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISL-IGWGVPAIVVAITVGV 587
Cdd:cd15994   73 -------------YPLCVAATFFLHFFYLSLFFWMLTKALLILYGILLVFFKITKSVFIATAFsIGYGCPLVIAVLTVAI 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 588 IYSQNGknpqweldYRQETICWLAIPEpdgvikSPLLWSFIVPVTIILISNVVIFITISIKVlWKNNQNLTSTKKVSSMR 667
Cdd:cd15994  140 TEPKKG--------YLRPEACWLNWDE------TKALLAFIIPALSIVVVNLIVVGVVVVKT-QRSSIGESCKQDVSNII 204
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 109032770 668 KIVSTLSVAV-VFGITWILAYLMLVNDDSirIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15994  205 RISKNVAILTpLLGLTWGFGLATIIDSRS--LPFHIIFALLNAFQGFFILLFGTI 257
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
522-713 8.28e-12

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 66.62  E-value: 8.28e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 522 NPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVaITVGVIYSQNGKNPQWELD 601
Cdd:cd15263   68 QKSCIILVVLLHYFHLTNFFWMFVEGLYLYMLVVETFSGENIKLRVYA-FIGWGIPAVVI-VIWAIVKALAPTAPNTALD 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 602 YRQETI-C-WLAipepdgviKSPLLWSFIVPVTIILISNVVIFITIS---IKVLWKNNqnltsTKKVSSMRKIVSTLSVA 676
Cdd:cd15263  146 PNGLLKhCpWMA--------EHIVDWIFQGPAILVLAVNLVFLVRIMwvlITKLRSAN-----TVETQQYRKAAKALLVL 212
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 109032770 677 V-VFGITWILAyLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:cd15263  213 IpLLGITYILV-IAGPTEGIAANIFEYVRAVLLSTQGF 249
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
434-721 1.21e-11

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 66.03  E-value: 1.21e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTrKVRKTSVTWVLVNLCISMLIFNLLFVFgiensnknktSDGDihdidfKNNDVp 513
Cdd:cd15255    4 LRTLSFIGCGVSLCALIVTFILFLAV-GVPKSERTTVHKNLIFALAAAEFLLMF----------SEWA------KGNQV- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qtdtinipnpTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIR-TMKPLPRhfILFISLIGWGVPAIVVAITVGVIYSQn 592
Cdd:cd15255   66 ----------ACWAVTALLHLFFLAAFSWMLVEGLLLWSKVVAvNMSEDRR--MKFYYVTGWGLPVVIVAVTLATSFNK- 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 593 gknpqweldYRQETICWLAipepdgvIKSPLLWSFIVPVTIILISNV-----VIFITIS-----IKVLWKNN--QNLTST 660
Cdd:cd15255  133 ---------YVADQHCWLN-------VQTDIIWAFVGPVLFVLTVNTfvlfrVVMVTVSsarrrAKMLTPSSdlEKQIGI 196
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 109032770 661 KKVSSMRKIVSTLSvavVFGITWILAYLMlvnddSIRIIFSYIFCLFNTTQGLQIFFLHTV 721
Cdd:cd15255  197 QIWATAKPVLVLLP---VLGLTWLCGVLV-----HLSDVWAYVFITLNSFQGLYIFLVYAI 249
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
383-422 2.52e-10

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 56.24  E-value: 2.52e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 109032770   383 CVYWNLSTRDWDTYGCQKHKGTDGFLRCHCNHTTNFAVLM 422
Cdd:smart00303   5 CVFWDESSGEWSTRGCELLETNGTHTTCSCNHLTTFAVLM 44
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
508-713 9.12e-10

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 60.12  E-value: 9.12e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 508 KNNDVPQTDTINipNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPA-IVVAITVG 586
Cdd:cd15264   58 QNTLTEIHHQSN--QWVCRLIVTVYNYFQVTNFFWMFVEGLYLHTMIVWAYSADKIRFWYYI-VIGWCIPCpFVLAWAIV 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 587 VIYSQNGKnpqweldyrqetiCWLaiPEPDGvikSPLLWSFIVPVTIILISNVVIFITIsIKVLWKNNQNLTSTKKVSSM 666
Cdd:cd15264  135 KLLYENEH-------------CWL--PKSEN---SYYDYIYQGPILLVLLINFIFLFNI-VWVLITKLRASNTLETIQYR 195
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 109032770 667 RKIVSTLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:cd15264  196 KAVKATLVLLPLLGITYMLFFINPGDDKTSRLVFIYFNTFLQSFQGL 242
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
525-685 1.50e-09

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 59.75  E-value: 1.50e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAI-TVGVIYSQNgknpqweldyr 603
Cdd:cd15930   77 CKASMVFFQYCVMANFFWLLVEGLYLHTLLVISFFSERRYFWWYV-LIGWGAPTVFVTVwIVARLYFED----------- 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 604 qeTICWlaipepDGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWK-NNQNLTSTKKVSSMRKIVSTLSVAVVFGIT 682
Cdd:cd15930  145 --TGCW------DINDESPYWWIIKGPILISILVNFVLFINIIRILLQKlRSPDIGGNESSQYKRLARSTLLLIPLFGIH 216

                 ...
gi 109032770 683 WIL 685
Cdd:cd15930  217 YIV 219
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
512-713 2.48e-08

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 55.74  E-value: 2.48e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 512 VPQTDTInIPNPT-CTAIAALLHYFLLVTFTWSALNAAQLYFLLI---RTMKPLPRHFILfislIGWGVPAIVVAITVGV 587
Cdd:cd15260   62 VDNPEVL-LENPIwCQALHVLLQYFMVCNYFWMFCEGLYLHTVLVvafISEKSLMRWFIA----IGWGVPLVITAIYAGV 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 588 IYSQNGKNPQweldyrqetiCWLAipepdgviKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMR 667
Cdd:cd15260  137 RASLPDDTER----------CWME--------ESSYQWILIVPVVLSLLINLIFLINIVRVLLTKLRATSPNPAPAGLRK 198
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 109032770 668 KIVSTLSVAVVFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:cd15260  199 AVRATLILIPLLGLQFLLIPFRPEPGAPLETIYQYVSALLTSLQGL 244
7tmB2_GPR125 cd15999
G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G ...
460-648 5.66e-08

G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR125 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, which also includes orphan receptors GPR123 and GPR124. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320665  Cd Length: 312  Bit Score: 55.25  E-value: 5.66e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 460 RKVRKTSVTW-VLVNLCISMLIFNLLFVFGIEnsnknktsdgdihdidfknndvpQTDTINIpnptCTAIAALLHYFLLV 538
Cdd:cd15999   31 SLVRISRKSWhMLVNLCFHIFLTCAVFVGGIN-----------------------QTRNASV----CQAVGIILHYSTLA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 539 TFTWSALNAAQLYFLLIRTMK---------PLPRHFILFIsLIGWGVPAIVVAITVGVIYSQNGKNPqweldyrQETICW 609
Cdd:cd15999   84 TVLWVGVTARNIYKQVTRKAKrcqdpdeppPPPRPMLRFY-LIGGGIPIIVCGITAAANIKNYGSRP-------NAPYCW 155
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 109032770 610 LAIpepdgvikSPLLWSFIVPVTIILISNVVIFITISIK 648
Cdd:cd15999  156 MAW--------EPSLGAFYGPAGFIIFVNCMYFLSIFIQ 186
7tmB2_GPR123 cd16000
G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G ...
525-722 9.09e-08

G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR123 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, and also includes orphan receptors GPR124 and GPR125. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells, yet its biological function remains to be determined. Adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320666 [Multi-domain]  Cd Length: 275  Bit Score: 54.19  E-value: 9.09e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRT--------MKPLPRHFILFISLIGWGVPAIVVAITVGVIYSQNGkNP 596
Cdd:cd16000   70 CQAVGIVLHYSTLSTMLWIGVTARNIYKQVTKKphlcqdtdQPPYPKQPLLRFYLVSGGVPFIICGITAATNINNYG-TE 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 597 QWELDYrqetiCWLAIpepdgvikSPLLWSFIVPVTIILISNVVIFITISIKvLWKNNQNLTSTKKVSSMRKIVSTLSVA 676
Cdd:cd16000  149 DEDTPY-----CWMAW--------EPSLGAFYGPVAFIVLVTCIYFLCTYVQ-LRRHPERKYELKNEHSFKAQLRAAAFT 214
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 109032770 677 V-VFGITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGLQIFFLHTVR 722
Cdd:cd16000  215 LfLFTATWAFGALAVSQGHFLDMIFSCLYGAFCVTLGLFILIHHCAK 261
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
433-685 1.39e-07

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 53.65  E-value: 1.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 433 SLDVFSNVGCALSITGLALTIVFQIVTRKVRktsvtwvlvnlCISMLIFNLLFVFGIENSNKNKTSDGDIhdidFKNNDv 512
Cdd:cd15270    3 TVKIIYTVGYSISIVSLCVAVAILVAFRRLH-----------CPRNYIHIQLFFTFILKAIAVFIKDAAL----FQEDD- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 513 pqTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGVIYsqn 592
Cdd:cd15270   67 --TDHCSMSTVLCKVSVVFCHYCVMTNFFWLLVEAVYLNCLLASSFPRGKRYFWWLV-LLGWGLPTLCTGTWILCKL--- 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 593 gknpqweldYRQETICWlaipepDGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIV-S 671
Cdd:cd15270  141 ---------YFEDTECW------DINNDSPYWWIIKGPIVISVGVNFLLFLNIIRILLKKLDPRQINFNNSAQYRRLSkS 205
                        250
                 ....*....|....
gi 109032770 672 TLSVAVVFGITWIL 685
Cdd:cd15270  206 TLLLIPLFGTHYII 219
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
525-713 2.20e-07

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 53.02  E-value: 2.20e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISlIGWGVP-AIVVAITVGVIYSQNGKnpqweldyr 603
Cdd:cd15445   73 CRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDKLRKWMFIC-IGWCIPfPIIVAWAIGKLYYDNEK--------- 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 604 qetiCWLAipepdgviKSPLLWSFIV---PVTIILISNVVIFITIsIKVLWKNNQNLTSTKKVSSMRKIVSTLSVAVVFG 680
Cdd:cd15445  143 ----CWFG--------KRAGVYTDYIyqgPMILVLLINFIFLFNI-VRILMTKLRASTTSETIQYRKAVKATLVLLPLLG 209
                        170       180       190
                 ....*....|....*....|....*....|...
gi 109032770 681 ITWILAYLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:cd15445  210 ITYMLFFVNPGEDEISRIVFIYFNSFLESFQGF 242
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
523-713 2.55e-07

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 52.65  E-value: 2.55e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 523 PTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPA-IVVAITVGVIYSQNGKnpqweld 601
Cdd:cd15446   70 VWCRCITTIYNYFVVTNFFWMFVEGCYLHTAIVMTYSTDKLRKWVFL-FIGWCIPCpIIVAWAIGKLYYENEQ------- 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 602 yrqetiCWLAiPEPDGVIKspllWSFIVPVTIILISNVVIFITIsIKVLWKNNQNLTSTKKVSSMRKIVSTLSVAVVFGI 681
Cdd:cd15446  142 ------CWFG-KEPGKYID----YIYQGPVILVLLINFVFLFNI-VRILMTKLRASTTSETIQYRKAVKATLVLLPLLGI 209
                        170       180       190
                 ....*....|....*....|....*....|..
gi 109032770 682 TWILAYLMLVNDDSIRIIFSYIFCLFNTTQGL 713
Cdd:cd15446  210 TYMLFFVNPGEDDISQIVFIYFNSFLQSFQGF 241
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
434-652 2.78e-07

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 52.83  E-value: 2.78e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSvTWVLVNLCISMLIFNLL-----FVFGIENSNKNKTSDGDIHDIDfk 508
Cdd:cd15266    4 LQLIYTIGYSLSLISLSLALLILLLLRKLHCTR-NYIHMNLFASFILRALAvlikdIVLYSTYSKRPDDETGWISYLS-- 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 509 nndvpqtdtiNIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAI-VVAITVGV 587
Cdd:cd15266   81 ----------EESSTSCRVAQVFMHYFVGANYFWLLVEGLYLHTLLVTAVLSERRLLKKYM-LIGWGTPVLfVVPWGVAK 149
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 109032770 588 IYSQNgknpqweldyrqeTICWlaipepdGVIKSPLLWSFIV-PVTIILISNVVIFITISIKVLWK 652
Cdd:cd15266  150 ILLEN-------------TGCW-------GRNENMGIWWIIRgPILLCITVNFYIFLKILKLLLSK 195
7tmB2_GPR124 cd15998
G protein-coupled receptor 124, member of the class B2 family of seven-transmembrane G ...
443-724 3.63e-07

G protein-coupled receptor 124, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR124 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, which also includes orphan GPR123 and GPR125. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Moreover, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320664 [Multi-domain]  Cd Length: 268  Bit Score: 52.27  E-value: 3.63e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 443 ALSITGLALTIVFQIVTRK-VRKTSVTW-VLVNLCISMLIFNLLFVFGIENSNKNKTsdgdihdidfknndvpqtdtini 520
Cdd:cd15998   13 ALLLLCLFSTIITYILNHSsIHVSRKGWhMLLNLCFHIAMTSAVFAGGITLTNYQMV----------------------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 521 pnptCTAIAALLHYFLLVTFTWSALNAAQLYFLLI---------RTMKPLPRHFILFIsLIGWGVPAIVVAITVGV-IYS 590
Cdd:cd15998   70 ----CQAVGITLHYSSLSTLLWMGVKARVLHKELTwrapppqegDPALPTPRPMLRFY-LIAGGIPLIICGITAAVnIHN 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 QNGKNPqweldyrqetICWLaipepdgvIKSPLLWSFIVPVTIILISNVVIFITISIKVLW--KNNQNLTSTKKVSSMRK 668
Cdd:cd15998  145 YRDHSP----------YCWL--------VWRPSLGAFYIPVALILLVTWIYFLCAGLHLRGpsADGDSVYSPGVQLGALV 206
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 109032770 669 IVSTLSVAVvfgitWILAYLMLVNDDSIRIIFSYIFCLFNTTQGLQIFFLHTVRTK 724
Cdd:cd15998  207 TTHFLYLAM-----WACGALAVSQRWLPRVVCSCLYGVAASALGLFVFTHHCARRR 257
7tmB1_PTH-R_related cd15272
invertebrate parathyroid hormone-related receptors, member of the class B family of ...
433-725 3.95e-07

invertebrate parathyroid hormone-related receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes parathyroid hormone (PTH)-related receptors found in invertebrates such as mollusks and annelid worms. The PTH family receptors are members of the B1 subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. The parathyroid hormone type 1 receptor (PTH1R) is found in all vertebrate species and is activated by two polypeptide ligands: parathyroid hormone (PTH), an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)- protein that in turn activates adenylyl cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple signaling pathways.


Pssm-ID: 320400 [Multi-domain]  Cd Length: 285  Bit Score: 52.39  E-value: 3.95e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 433 SLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSVTwVLVNLCISmLIFNLLFVFGIENSnknKTSDGDIHDIDFKNNDV 512
Cdd:cd15272    3 SIRLMYNIGYGLSLVSLLIAVIIMLYFKKLHCPRNT-IHINLFVS-FILRAVLSFIKENL---LVQGVGFPGDVYYDSNG 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 513 PQTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGViysqn 592
Cdd:cd15272   78 VIEFKDEGSHWECKLFFTMFNYILGANYMWIFVEGLYLHMLIFVAVFSENSRVKWYI-LLGWLSPLLFVLPWVFV----- 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 593 gknpqweLDYRQETICWLAIPEPDgvikspLLWSFIVPVTIILISNVVIFITIsIKVLW-KNNQNLTSTKKVSSMRKIV- 670
Cdd:cd15272  152 -------RATLEDTLCWNTNTNKG------YFWIIRGPIVISIAINFLFFINI-VRVLFtKLKASNTQESRPFRYRKLAk 217
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 109032770 671 STLSVAVVFGITWILAYLMLVN--DDSIRIIFSYIFCLFNTTQGLQI-----FFLHTVRTKI 725
Cdd:cd15272  218 STLVLIPLFGVHYMVFVVLPDSmsSDEAELVWLYFEMFFNSFQGFIVallfcFLNGEVQSEI 279
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
511-685 6.84e-07

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 51.39  E-value: 6.84e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 511 DVPQTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAI-VVAITVGVIY 589
Cdd:cd15269   63 ESGEEDHCSVASVGCKAAMVFFQYCIMANFFWLLVEGLYLHTLLAVSFFSERKYFWWYI-LIGWGAPSVfITAWSVARIY 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 590 SQNgknpqweldyrqeTICWlaipepDGVIKSPLLWSFIVPVTIILISNVVIFITIsIKVLWK--NNQNLTSTKKVSSMR 667
Cdd:cd15269  142 FED-------------VGCW------DTIIESLLWWIIKTPILVSILVNFILFICI-IRILVQklHSPDIGRNESSQYSR 201
                        170
                 ....*....|....*...
gi 109032770 668 KIVSTLSVAVVFGITWIL 685
Cdd:cd15269  202 LAKSTLLLIPLFGIHYIM 219
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
525-719 9.45e-07

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 50.96  E-value: 9.45e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPlPRHFILFIsLIGWGVPAI-VVAITVGVIysqngknpqweldYR 603
Cdd:cd15986   79 CKVSLVILQYCIMANFYWLLVEGLYLHTLLVVIFSE-NRHFIVYL-LIGWGIPTVfIIAWIVARI-------------YL 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 604 QETICWLAI--PEPDGVIKSPLLWSFIVpvtiilisNVVIFITIsIKVLWknnQNLTS-----TKKVSSMRKIVSTLSVA 676
Cdd:cd15986  144 EDTGCWDTNdhSVPWWVIRIPIIISIIL--------NFILFISI-IRILL---QKLRSpdvggNDQSQYKRLAKSTLLLI 211
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 109032770 677 VVFGITWIL-AYLMLVNDDSIRIIFSyiFCLfNTTQGLQIFFLH 719
Cdd:cd15986  212 PLFGVHYIVfVYFPDSSSSNYQIFFE--LCL-GSFQGLVVAILY 252
7tmB1_PACAP-R1 cd15987
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B ...
525-683 1.10e-06

pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.


Pssm-ID: 320653 [Multi-domain]  Cd Length: 268  Bit Score: 51.12  E-value: 1.10e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFiSLIGWGVPAIVVAItvgviysqngknpqWEL--DY 602
Cdd:cd15987   77 CKAVMVFFHYCVMSNYFWLFIEGLYLFTLLVETFFPERRYFYWY-TIIGWGTPTICVTV--------------WAVlrLH 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 603 RQETICWlaipepDGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWK-NNQNLTSTKKVSSMRKIVSTLSVAVVFGI 681
Cdd:cd15987  142 FDDTGCW------DMNDNTALWWVIKGPVVGSIMINFVLFIGIIIILVQKlQSPDIGGNESSIYLRLARSTLLLIPLFGI 215

                 ..
gi 109032770 682 TW 683
Cdd:cd15987  216 HY 217
7tmB1_PTH3R cd15983
parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G ...
525-732 2.17e-06

parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 3 receptor (PTH3R), one of the three subtypes of PTH receptor family, is found in chicken and fish, but it is absent in mammals. On the other hand, the PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH1R is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. Conversely, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320649 [Multi-domain]  Cd Length: 285  Bit Score: 50.31  E-value: 2.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIrtMKPLP-RHFILFISLIGWGVPAIVVAITVGVIYSqngknpqweldyR 603
Cdd:cd15983   90 CKVTVTLFLYFLATNHYWILVEGLYLHSLIF--MAFLSdKNYLWALTIIGWGLPAVFVSVWASVRVS------------L 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 604 QETICWlaipepdGVIKSPLLWSFIVPVTIILISNVVIFITIsIKV----LWKNNQNLTSTKKvsSMRKIV-STLSVAVV 678
Cdd:cd15983  156 ADTQCW-------DLSAGNLKWIYQVPILAAILVNFFLFLNI-VRVlaskLWETNTGKLDPRQ--QYRKLLkSTLVLMPL 225
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 109032770 679 FGITWILAYLMLVNDDS--IRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASK 732
Cdd:cd15983  226 FGVHYVLFMAMPYTDVTglLWQIQMHYEMLFNSSQGFFVAFIYCFCNGEVQAEIKK 281
7tmB1_NPR_B7_insect-like cd15273
insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of ...
479-713 2.46e-06

insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from invertebrates. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320401 [Multi-domain]  Cd Length: 285  Bit Score: 50.06  E-value: 2.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 479 LIFNLLFVFGIensnknktsdGDIHDIDFKNNDVpQTDTINIP-NPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRT 557
Cdd:cd15273   55 LLKDSLFIDGL----------GLLADIVERNGGG-NEVIANIGsNWVCKAITSLWQYFIIANYSWILMEGLYLHNLIFLA 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 558 MKPLPRHFILFISLiGWGVPAIVVAITVGViysqngkNPQWEldyrqETICWLAIPEPDgvikspLLWSFIVPVTIILIS 637
Cdd:cd15273  124 LFSDENNIILYILL-GWGLPLIFVVPWIVA-------RILFE-----NSLCWTTNSNLL------NFLIIRIPIMISVLI 184
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 109032770 638 NVVIFITISiKVLWKNNQNLTSTKKVSSMRKIVSTLSVAVVFGITW-ILAYLMLVNDDSIRIIFSYIFC--LFNTTQGL 713
Cdd:cd15273  185 NFILFLNIV-RVLLVKLRSSVNEDSRRYKKWAKSTLVLVPLFGVHYtIFLILSYLDDTNEAVELIWLFCdqLFASFQGF 262
7tmB1_GlucagonR-like cd15929
glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G ...
432-732 3.99e-06

glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents the glucagon receptor family of G protein-coupled receptors, which includes glucagon receptor (GCGR), glucagon-like peptide-1 receptor (GLP1R), GLP2R, and closely related receptors. These receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341353 [Multi-domain]  Cd Length: 279  Bit Score: 49.35  E-value: 3.99e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 432 ESLDVFSNVGCALSITGLALTIVFQIVTRKVRKTSvTWVLVNLCISmLIFNLLFVFGIENSNKNKTS-DGDihdidfknN 510
Cdd:cd15929    2 SSLQVMYTVGYSLSLAALVLALAILLGLRKLHCTR-NYIHANLFAS-FILRALSVLVKDALLPRRYSqKGD--------Q 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 511 DVPQTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITVGVIYs 590
Cdd:cd15929   72 DLWSTLLSNQASLGCRVAQVLMQYCVAANYYWLLVEGLYLHTLLVLAVFSERSIFRLYL-LLGWGAPVLFVVPWGIVKY- 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 qngknpqweldYRQETICWlaipEPDGVIKspLLWSFIVPVTIILISNVVIFITIsIKVL---WKNNQNLTSTKKvssMR 667
Cdd:cd15929  150 -----------LYENTGCW----TRNDNMA--YWWIIRLPILLAILINFFIFVRI-LKILvskLRANQMCKTDYK---FR 208
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 109032770 668 KIVSTLSVAVVFGITWILayLMLVNDDSIRIIFSYI---FCLF-NTTQGLQIFFLHTVRTKIFQTEASK 732
Cdd:cd15929  209 LAKSTLTLIPLLGVHEVV--FAFVTDEQARGTLRFIklfFELFlSSFQGLLVAVLYCFANKEVQSELRK 275
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
562-706 7.61e-06

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 48.06  E-value: 7.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770  562 PRHFILFISLIgWgVPAIVVAITVGVIYSQNGKNPQWEldyrqeTICWLAIPEPDGVIKSPLLWS----FIVPVTIILIS 637
Cdd:pfam00001  99 PRRAKVLILVI-W-VLALLLSLPPLLFGWTLTVPEGNV------TVCFIDFPEDLSKPVSYTLLIsvlgFLLPLLVILVC 170
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 109032770  638 NVVIFITisikvLWKNNQNLTSTKKVSSMRKIVSTLSVAV-VFGITW---ILAYLMLV------NDDSIRIIFSYIFCL 706
Cdd:pfam00001 171 YTLIIRT-----LRKSASKQKSSERTQRRRKALKTLAVVVvVFILCWlpyHIVNLLDSlaldceLSRLLDKALSVTLWL 244
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
525-685 1.03e-05

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 47.80  E-value: 1.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKpLPRHFILFISLIGWGVPAIVVAITVGVIYSQngknpqweldyrQ 604
Cdd:cd15271   77 CKAAVTFFQFCVLANFFWLLVEGMYLQTLLLLTFT-SDRKYFWWYILIGWGAPSVTVTVWVLTRLQY------------D 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 605 ETICWlaipepdGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWK-NNQNLTSTKKVSSMRKIVSTLSVAVVFGITW 683
Cdd:cd15271  144 NRGCW-------DDLESRIWWIIKTPILLSVFVNFLIFINVIRILVQKlKSPDVGGNDTSHYMRLAKSTLLLIPLFGVHY 216

                 ..
gi 109032770 684 IL 685
Cdd:cd15271  217 VV 218
7tmB1_PTHR cd15265
parathyroid hormone receptors, member of the class B family of seven-transmembrane G ...
524-717 1.19e-04

parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to a G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. On the other hand, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. Moreover, the PTH3R is more closely related to the PTH1R than PTH2R. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. The PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320393 [Multi-domain]  Cd Length: 289  Bit Score: 44.67  E-value: 1.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 524 TCTAIAALLHYFLLVTFTWSALNAAQLYFLLirtmkplprhFILFIS---------LIGWGVPAIVVAITVGVIYSQngk 594
Cdd:cd15265   94 GCKVAVTLFLYFLATNYYWILVEGLYLHSLI----------FMAFFSdkkylwgftLIGWGFPAVFVIPWASVRATL--- 160
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 595 npqweldyrQETICWlaiPEPDGVIKspllWSFIVPVTIILISNVVIFITIsIKVL----WKNNQNLTSTKKvsSMRKIV 670
Cdd:cd15265  161 ---------ADTRCW---DLSAGNYK----WIYQVPILAAIVVNFILFLNI-VRVLatklRETNAGRCDTRQ--QYRKLA 221
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 109032770 671 -STLSVAVVFGITWILAYLMLVNDDSIRIIFSYIF-CLFNTTQGlqiFF 717
Cdd:cd15265  222 kSTLVLIPLFGVHYIVFMGMPYTEVGLLWQIRMHYeLFFNSFQG---FF 267
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
434-719 1.35e-04

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 44.35  E-value: 1.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 434 LDVFSNVGCALSITGLALTIVFQIVTRKVRKTSvTWVLVNLCISmLIFNLLFVFgIENSNKNKTSDgdihdidfknndvp 513
Cdd:cd15275    4 LKTMYTVGYSVSLVSLAIALAILCSFRRLHCTR-NYIHMQLFLS-FILRAISIF-IKDAVLFSSED-------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 514 qTDTINIPNPTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISLiGWGVPAIVVAitvgviysqng 593
Cdd:cd15275   67 -DNHCDIYTVGCKVAMVFSNYCIMANYSWLLVEGLYLHSLLSISFFSERKHLWWYIAL-GWGSPLIFII----------- 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 594 knpQWEL-DYRQETI-CWlaipepDGVIKSPLLWSFIVPVTIILISNVVIFITISIKVLWKNNQNLTSTKKVSSMRKIV- 670
Cdd:cd15275  134 ---SWAIaRYLHENEgCW------DTRRNAWIWWIIRGPVILSIFVNFILFLNILRILMRKLRAPDMRGNEFSQYKRLAk 204
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 109032770 671 STLSVAVVFGITWILaYLMLVNDDSIRI--IFSYIFCLFNTTQGLQIFFLH 719
Cdd:cd15275  205 STLLLIPLFGLHYIL-FAFFPEDVSSGTmeIWLFFELALGSFQGFVVAVLY 254
7tmB1_PTH2R cd15982
parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G ...
525-735 1.68e-04

parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 2 receptor (PTH2R), one of the three subtypes of PTH receptor family, is found in mammals and fish, but not in chicken or frog. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39) but not by PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs. These results suggest that TIP-39 is a natural ligand for PTH2R. Conversely, PTH1R is activated by PTH and PTHrP, but not by TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320648 [Multi-domain]  Cd Length: 289  Bit Score: 44.54  E-value: 1.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFIsLIGWGVPAIVVAITvGVIYSQNGKNPQWELDyrq 604
Cdd:cd15982   95 CKIAVVMFIYFLATNYYWILVEGLYLHSLIFVAFFSDTKYLWGFT-LIGWGFPAVFVAAW-AVVRATLADARCWELS--- 169
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 605 eticwlaipepDGVIKspllWSFIVPVTIILISNVVIFITIsIKVL----WKNNQNLTSTKKvsSMRKIV-STLSVAVVF 679
Cdd:cd15982  170 -----------AGDIK----WIYQAPILAAIGLNFILFLNT-VRVLatkiWETNAVGYDTRK--QYRKLAkSTLVLVLVF 231
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 109032770 680 GITWILAYLMLVNDDSIRI-IFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASKVLT 735
Cdd:cd15982  232 GVHYIVFVCLPHTFTGLGWeIRMHCELFFNSFQGFFVSIIYCYCNGEVQTEIKKTWT 288
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
525-732 2.18e-04

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 44.17  E-value: 2.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPlPRHFILFISLIGWGVPAIVVAITVGVIYSQngknpqweldyrQ 604
Cdd:cd15984   95 CKVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFS-EKKYLWGFTLFGWGLPAVFVTIWASVRATL------------A 161
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 605 ETICWlaipepdGVIKSPLLWSFIVPVTIILISNVVIFITIsIKVLW----KNNQNLTSTKKvsSMRKIV-STLSVAVVF 679
Cdd:cd15984  162 DTGCW-------DLSAGNLKWIIQVPILAAIVVNFILFINI-VRVLAtklrETNAGRCDTRQ--QYRKLLkSTLVLMPLF 231
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 109032770 680 GITWILAYLMLVNDDS--IRIIFSYIFCLFNTTQGLQIFFLHTVRTKIFQTEASK 732
Cdd:cd15984  232 GVHYIVFMAMPYTEVSgiLWQVQMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIKK 286
7tmE_cAMP_R_Slime_mold cd14940
slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G ...
523-686 4.96e-04

slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G protein-coupled receptors; This family represents the class E of seven-transmembrane G-protein coupled receptors found in soil-living amoebas, commonly referred to as slime molds. The class E family includes cAMP receptors (cAR1-4) and cAMP receptors-like proteins (CrlA-C) from Dictyostelium discoideum, and their highly homologous cAMP receptors (TasA and TasB) from Polysphondylium pallidum. So far, four subtypes of cAMP receptors (cAR1-4) have been identified that play an essential role in the detection and transmit of the periodic extracellular cAMP waves that regulate chemotactic cell movement during Dictyostelium development, from the unicellular amoeba aggregate into many multicellular slugs and then differentiate into a sporocarp, a fruiting body with cells specialized for different functions. These four subtypes differ in their expression levels and patterns during development. cAR1 is high-affinity receptor that is the first one to be expressed highly during early aggregation and continues to be expressed at low levels during later developmental stages. cAR1 detects extracellular cAMP and is coupled to G-alpha2 protein. Cells lacking cAR1 fail to aggregate, demonstrating that cAR1 is responsible for aggregation. During later aggregation the high-affinity cAR3 receptor is expressed at low levels. Nonetheless, cells lacking cAR3 do not show an obviously altered pattern of development and are still able to aggregate into fruiting bodies. In contrast, cAR2 and cAR4 are low affinity receptors expressed predominantly after aggregation in pre-stalk cells. cAR2 is essential for normal tip formation and deletion of the receptor arrests development at the mound stage. On the other hand, CAR4 regulates axial patterning and cellular differentiation, and deletion of the receptor results in defects during culmination. Furthermore, three cAMP receptor-like proteins (CrlA-C) were identified in Dictyostelium that show limited sequence similarity to the cAMP receptors. Of these CrlA is thought to be required for normal cell growth and tip formation in developing aggregates.


Pssm-ID: 320094 [Multi-domain]  Cd Length: 256  Bit Score: 42.72  E-value: 4.96e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 523 PTCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRtMKPLPRHFILFISLIGWGVPAIVVAITvgVIYSQNGKNPQWeldy 602
Cdd:cd14940   66 FLCYLYAIVITYGSLSCWLWTLCLAISIYLLIVK-REPEPEKFEKYYHFVCWGLPLISTIIM--LIKHHYGPVGNW---- 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 603 rqetiCWLaIPEPDGVikspLLWSFIVPVTIILISNVVIFITISIKvLWKNNQNLTSTKKVSSMRKIVSTLSVAVVFGIT 682
Cdd:cd14940  139 -----CWI-GNQYTGY----RFGLFYGPFFIIFGISAVLVGLTSHY-TYQVIHNWVSDNKDLHKTYQFKLVNYIIVFLLC 207

                 ....
gi 109032770 683 WILA 686
Cdd:cd14940  208 WIFA 211
7tmB1_GLP1R cd15268
glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G ...
524-732 5.65e-04

glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-1 receptor (GLP1R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor and GLP2R. GLP1R is activated by glucagon-like peptide 1 (GLP1), which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341342 [Multi-domain]  Cd Length: 279  Bit Score: 42.63  E-value: 5.65e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 524 TCTAIAALLHYFLLVTFTWSALNAAQLYFLLIRTMKPLPRHFILFISlIGWGVPAIVVAI--TVGVIYSQNGknpQWELD 601
Cdd:cd15268   85 SCRLVFLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQRIFRLYLS-IGWGVPLLFVIPwgIVKYLYEDEG---CWTRN 160
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 602 YRQETicWLaipepdgVIKSPLLWSFIVpvtiilisNVVIFITISIKVLWKNNQNLTSTKKVsSMRKIVSTLSVAVVFGI 681
Cdd:cd15268  161 SNMNY--WL-------IIRLPILFAIGV--------NFLIFIRVICIVVSKLKANLMCKTDI-KCRLAKSTLTLIPLLGT 222
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 109032770 682 -TWILAYLMlvnDDSIRIIFSYIFCL----FNTTQGLQIFFLHTVRTKIFQTEASK 732
Cdd:cd15268  223 hEVIFAFVM---DEHARGTLRFVKLFtelsFTSFQGLMVAILYCFVNNEVQMEFRK 275
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
442-706 1.11e-03

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 41.51  E-value: 1.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 442 CALSITGLALTIVfqIVTRKVRKTSVTWVLV-NLCIS---MLIFNLLFVFGIENSNKNKTSDGdihdidfknndvpqtdt 517
Cdd:cd00637    9 FVVGLVGNLLVIL--VILRNRRLRTVTNYFIlNLAVAdllVGLLVIPFSLVSLLLGRWWFGDA----------------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 518 inipnpTCTAIAALLHYFLLV---TFTWSALNAaqlYFLLIRTMKPL----PRHFILFISLIgWGVPAIVVAITVGVIys 590
Cdd:cd00637   70 ------LCKLLGFLQSVSLLAsilTLTAISVDR---YLAIVHPLRYRrrftRRRAKLLIALI-WLLSLLLALPPLLGW-- 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 qngknpqWELDYRQETICWLAIPEPDGVIKSPLLWS---FIVPVTIILISNVVIFITI--SIKVLWKNNQNLTSTKKVSS 665
Cdd:cd00637  138 -------GVYDYGGYCCCCLCWPDLTLSKAYTIFLFvllFLLPLLVIIVCYVRIFRKLrrHRRRIRSSSSNSSRRRRRRR 210
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 109032770 666 MRKIVSTL-SVAVVFGITW-------ILAYLMLVNDDSIRIIFSYIFCL 706
Cdd:cd00637  211 ERKVTKTLlIVVVVFLLCWlpyfillLLDVFGPDPSPLPRILYFLALLL 259
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
525-700 4.06e-03

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 39.72  E-value: 4.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 525 CTAIAALLHYFLLVTFTWSALNAAQLYFLL---IRTMKPLPRHFILFISLIGWGVPAI-VVAITVGVIYSQNGKNPQWEl 600
Cdd:cd14964   71 CYLIYLLWYGANLASIWTTLVLTYHRYFALcgpLKYTRLSSPGKTRVIILGCWGVSLLlSIPPLVGKGAIPRYNTLTGS- 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 601 dyrQETICWLAIpepdgVIKSPLLWSFIVPVTIILISNVVIFITISIKVlwKNNQNLTSTKKVSSMRKIVSTLSVAVVFG 680
Cdd:cd14964  150 ---CYLICTTIY-----LTWGFLLVSFLLPLVAFLVIFSRIVLRLRRRV--RAIRSAASLNTDKNLKATKSLLILVITFL 219
                        170       180
                 ....*....|....*....|
gi 109032770 681 ITWILAYLMLVNDDSIRIIF 700
Cdd:cd14964  220 LCWLPFSIVFILHALVAAGQ 239
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
443-684 4.62e-03

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 39.71  E-value: 4.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 443 ALSITGLALTIVFQIVTRKVRKTSVTWVLV-NLCISMLIFnLLFVfgiensnknktsdgdihdidfknndVPQTDTI-NI 520
Cdd:cd15098   12 CLGVLGNSLVITVLARVKPGKRRSTTNVFIlNLSIADLFF-LLFC-------------------------VPFQATIySL 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 521 PNPTCTA-IAALLHYFLLVT-----FTWSALnAAQLYFLLIRTMKP----LPRHFILFISLIgWgvpAIVVAITVGVIYS 590
Cdd:cd15098   66 PEWVFGAfMCKFVHYFFTVSmlvsiFTLVAM-SVDRYIAVVHSRTSsslrTRRNALLGVLVI-W---VLSLAMASPVAVH 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 109032770 591 QNGKNPQwelDYRQETICWLAIPEPD---GVIKSPLLWSFIVPVTIILISNVVIfitisIKVLWKNNQNLTSTKKVSSMR 667
Cdd:cd15098  141 QDLVHHW---TASNQTFCWENWPEKQqkpVYVVCTFVFGYLLPLLLITFCYAKV-----LNHLHKKLKNMSKKSERSKKK 212
                        250
                 ....*....|....*..
gi 109032770 668 KIVSTLSVAVVFGITWI 684
Cdd:cd15098  213 TAQTVLVVVVVFGISWL 229
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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