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Conserved domains on  [gi|499186629|ref|WP_010884169|]
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pyridoxal-phosphate dependent enzyme [Pyrococcus horikoshii]

Protein Classification

PALP domain-containing protein; threonine synthase( domain architecture ID 10014548)

PALP domain-containing protein belonging to the tryptophan synthase beta superfamily (fold type II) that consists of pyridoxal phosphate (PLP)-dependent enzymes that catalyze beta-replacement and beta-elimination reactions| threonine synthase catalyzes the final step of threonine biosynthesis, the gamma-elimination of phosphate from L-phosphohomoserine and the beta-addition of water to produce L-threonine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK14045 PRK14045
1-aminocyclopropane-1-carboxylate deaminase; Provisional
1-325 0e+00

1-aminocyclopropane-1-carboxylate deaminase; Provisional


:

Pssm-ID: 172537 [Multi-domain]  Cd Length: 329  Bit Score: 593.79  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   1 MHPKIFALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVH 80
Cdd:PRK14045   1 MHPKVDALLSKFPRVELIPWETPIQYLPNISRELGADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGADVVITVGAVH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  81 SNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGAS 160
Cdd:PRK14045  81 SNHAFVTGLAAKKLGLDAVLVLRGKEELKGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAEELKGEGRKPYIIPPGGAS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 161 PIGTLGYVRAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAEL 237
Cdd:PRK14045 161 PVGTLGYVRAVGEIATQVKklgVRFDSIVVAVGSGGTLAGLSLGLAILNAEWRVVGIAVGSFGEKMKEKVKNLVKKTKEL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 238 LGVKVEV-RPELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGELGEKILFIHTGGISGTFH 316
Cdd:PRK14045 241 LGVKVKVqEPELYDYSFGEYGKITKEVAKLIRSVGTMEGLILDPVYTGKAFYGLMDLAKKGELGEKILFIHTGGISGTFH 320

                 ....*....
gi 499186629 317 YGDKLLSLL 325
Cdd:PRK14045 321 YGDKMLSLL 329
 
Name Accession Description Interval E-value
PRK14045 PRK14045
1-aminocyclopropane-1-carboxylate deaminase; Provisional
1-325 0e+00

1-aminocyclopropane-1-carboxylate deaminase; Provisional


Pssm-ID: 172537 [Multi-domain]  Cd Length: 329  Bit Score: 593.79  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   1 MHPKIFALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVH 80
Cdd:PRK14045   1 MHPKVDALLSKFPRVELIPWETPIQYLPNISRELGADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGADVVITVGAVH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  81 SNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGAS 160
Cdd:PRK14045  81 SNHAFVTGLAAKKLGLDAVLVLRGKEELKGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAEELKGEGRKPYIIPPGGAS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 161 PIGTLGYVRAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAEL 237
Cdd:PRK14045 161 PVGTLGYVRAVGEIATQVKklgVRFDSIVVAVGSGGTLAGLSLGLAILNAEWRVVGIAVGSFGEKMKEKVKNLVKKTKEL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 238 LGVKVEV-RPELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGELGEKILFIHTGGISGTFH 316
Cdd:PRK14045 241 LGVKVKVqEPELYDYSFGEYGKITKEVAKLIRSVGTMEGLILDPVYTGKAFYGLMDLAKKGELGEKILFIHTGGISGTFH 320

                 ....*....
gi 499186629 317 YGDKLLSLL 325
Cdd:PRK14045 321 YGDKMLSLL 329
ACC_deam_rel TIGR01275
pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents ...
15-321 4.65e-169

pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).


Pssm-ID: 273533 [Multi-domain]  Cd Length: 318  Bit Score: 472.37  E-value: 4.65e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   15 VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKL 94
Cdd:TIGR01275   1 LELIGAPTPIQYLPRLSDYLGREIYIKRDDLTGLAMGGNKIRKLEFLLADALRKGADTVITAGAIQSNHARATAAVAAKL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   95 GLDAILVLR-------GKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGY 167
Cdd:TIGR01275  81 GLHCVLLLRnpigttaENYLLNGNLLLDDLFGAETRIESCEEYTDIDAQLEELAERLEKEGFKPYVIPVGGSNSLGALGY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  168 VRAVGEIATQ--SEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKV-EV 244
Cdd:TIGR01275 161 VEAALEIAQQleSEVKFDSIVVASGSGGTIAGLSLGLSHLMPDVELVGVTVSRFVADQTDKFVNLVQAIAEGLELTVsAV 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499186629  245 RPELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGELGEK-ILFIHTGGISGTFHYGDKL 321
Cdd:TIGR01275 241 IPLWDDYFGPGYGVPTSEGMEIVKKVASLEGIILDPVYTGKAFYGLIDGIRKKEFGDKpILFIHTGGIPGLFAYHDHL 318
ACCD cd06449
Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme ...
22-310 7.18e-138

Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.


Pssm-ID: 107210  Cd Length: 307  Bit Score: 392.94  E-value: 7.18e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  22 TPIQYLPNISREIG--ADVYIKRDDLT-GLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDA 98
Cdd:cd06449    1 TPIQYLPRLSEHLGgkVEIYAKRDDCNsGLAFGGNKIRKLEYLLPDALAKGADTLVTVGGIQSNHTRQVAAVAAKLGLKC 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  99 ILVLRGKE-------ELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGA-SPIGTLGYVRA 170
Cdd:cd06449   81 VLVQENWVpysdavyDRVGNILLSRIMGADVRLVSAGFDIGIRKSFEEAAEEVEAKGGKPYVIPAGGSeHPLGGLGYVGF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 171 VGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLI--KEAAELLGVKVEVR 245
Cdd:cd06449  161 VLEIAQQEEelgFKFDSIVVCSVTGSTHAGLSVGLAALGRQRRVIGIDASAKPEKTKAQVLRIAqaKLAEEGLEVKEEDV 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499186629 246 PELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGE--LGEKILFIHTGG 310
Cdd:cd06449  241 VLDDDYAAPEYGIPNDETIEAIKLCARLEGIITDPVYEGKSMQGMIDLVRNGEfkEGSKVLFIHLGG 307
Acd COG2515
1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family ...
11-319 3.62e-135

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism];


Pssm-ID: 442005 [Multi-domain]  Cd Length: 317  Bit Score: 386.46  E-value: 3.62e-135
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  11 KFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLA 90
Cdd:COG2515    1 RFPRLPLAFLPTPLQPLPRLSAALGVELWIKRDDLTGPAIGGNKTRKLEYLLADALAQGADTLVTFGGAQSNHARATAAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  91 AKKLGLDAILVLRGKE--ELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYV 168
Cdd:COG2515   81 AAKLGLKCVLVLRGEEptPLNGNLLLDRLLGAELHFVSRGEYRDRDEAMEAVAAELRARGGKPYVIPEGGSNPLGALGYV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 169 RAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVR 245
Cdd:COG2515  161 EAAAELAAQLAelgVDFDYIVVASGSGGTLAGLVAGLALLGSDTRVIGISVLKGADFLRERVAELARATAALLGLVSRAD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499186629 246 PEL-YDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL--GEKILFIHTGGISGTFHYGD 319
Cdd:COG2515  241 IELdDDYHGGGYGKPTPELIEAIRLFARTEGILLDPVYTGKAMAGLIDLIRKGRFppGSRVLFIHTGGLPGLFGYAE 317
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
15-309 8.12e-44

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 152.08  E-value: 8.12e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   15 VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGigGNKIRKLEYLLGDALS-KGADVVITVGAvhSNHAFVTGLAAKK 93
Cdd:pfam00291   1 ISLGIGPTPLVRLPRLSKELGVDVYLKLESLNPTG--SFKDRGALNLLLRLKEgEGGKTVVEASS--GNHGRALAAAAAR 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   94 LGLDAILVLRGKEElKGNYLLDKIMGIETRVYDAkdSFELmkyAEEIAEELKREGRKPYVIPPGGaSPIGTLGYVRAVGE 173
Cdd:pfam00291  77 LGLKVTIVVPEDAP-PGKLLLMRALGAEVVLVGG--DYDE---AVAAARELAAEGPGAYYINQYD-NPLNIEGYGTIGLE 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  174 IATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI------AVGRFGEVMTSKLDNLIKEAAELLGVKVEVRP- 246
Cdd:pfam00291 150 ILEQLGGDPDAVVVPVGGGGLIAGIARGLKELGPDVRVIGVepegapALARSLAAGRPVPVPVADTIADGLGVGDEPGAl 229
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499186629  247 --ELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPvYTGKAFYGLvDLARKGELGEK--ILFIHTG 309
Cdd:pfam00291 230 alDLLDEYVGEvVTVSDEEALEAMRLLARREGIVVEP-SSAAALAAL-KLALAGELKGGdrVVVVLTG 295
 
Name Accession Description Interval E-value
PRK14045 PRK14045
1-aminocyclopropane-1-carboxylate deaminase; Provisional
1-325 0e+00

1-aminocyclopropane-1-carboxylate deaminase; Provisional


Pssm-ID: 172537 [Multi-domain]  Cd Length: 329  Bit Score: 593.79  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   1 MHPKIFALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVH 80
Cdd:PRK14045   1 MHPKVDALLSKFPRVELIPWETPIQYLPNISRELGADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGADVVITVGAVH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  81 SNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGAS 160
Cdd:PRK14045  81 SNHAFVTGLAAKKLGLDAVLVLRGKEELKGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAEELKGEGRKPYIIPPGGAS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 161 PIGTLGYVRAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAEL 237
Cdd:PRK14045 161 PVGTLGYVRAVGEIATQVKklgVRFDSIVVAVGSGGTLAGLSLGLAILNAEWRVVGIAVGSFGEKMKEKVKNLVKKTKEL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 238 LGVKVEV-RPELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGELGEKILFIHTGGISGTFH 316
Cdd:PRK14045 241 LGVKVKVqEPELYDYSFGEYGKITKEVAKLIRSVGTMEGLILDPVYTGKAFYGLMDLAKKGELGEKILFIHTGGISGTFH 320

                 ....*....
gi 499186629 317 YGDKLLSLL 325
Cdd:PRK14045 321 YGDKMLSLL 329
ACC_deam_rel TIGR01275
pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents ...
15-321 4.65e-169

pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).


Pssm-ID: 273533 [Multi-domain]  Cd Length: 318  Bit Score: 472.37  E-value: 4.65e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   15 VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKL 94
Cdd:TIGR01275   1 LELIGAPTPIQYLPRLSDYLGREIYIKRDDLTGLAMGGNKIRKLEFLLADALRKGADTVITAGAIQSNHARATAAVAAKL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   95 GLDAILVLR-------GKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGY 167
Cdd:TIGR01275  81 GLHCVLLLRnpigttaENYLLNGNLLLDDLFGAETRIESCEEYTDIDAQLEELAERLEKEGFKPYVIPVGGSNSLGALGY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  168 VRAVGEIATQ--SEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKV-EV 244
Cdd:TIGR01275 161 VEAALEIAQQleSEVKFDSIVVASGSGGTIAGLSLGLSHLMPDVELVGVTVSRFVADQTDKFVNLVQAIAEGLELTVsAV 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499186629  245 RPELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGELGEK-ILFIHTGGISGTFHYGDKL 321
Cdd:TIGR01275 241 IPLWDDYFGPGYGVPTSEGMEIVKKVASLEGIILDPVYTGKAFYGLIDGIRKKEFGDKpILFIHTGGIPGLFAYHDHL 318
ACCD cd06449
Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme ...
22-310 7.18e-138

Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.


Pssm-ID: 107210  Cd Length: 307  Bit Score: 392.94  E-value: 7.18e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  22 TPIQYLPNISREIG--ADVYIKRDDLT-GLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDA 98
Cdd:cd06449    1 TPIQYLPRLSEHLGgkVEIYAKRDDCNsGLAFGGNKIRKLEYLLPDALAKGADTLVTVGGIQSNHTRQVAAVAAKLGLKC 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  99 ILVLRGKE-------ELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGA-SPIGTLGYVRA 170
Cdd:cd06449   81 VLVQENWVpysdavyDRVGNILLSRIMGADVRLVSAGFDIGIRKSFEEAAEEVEAKGGKPYVIPAGGSeHPLGGLGYVGF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 171 VGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLI--KEAAELLGVKVEVR 245
Cdd:cd06449  161 VLEIAQQEEelgFKFDSIVVCSVTGSTHAGLSVGLAALGRQRRVIGIDASAKPEKTKAQVLRIAqaKLAEEGLEVKEEDV 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499186629 246 PELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGE--LGEKILFIHTGG 310
Cdd:cd06449  241 VLDDDYAAPEYGIPNDETIEAIKLCARLEGIITDPVYEGKSMQGMIDLVRNGEfkEGSKVLFIHLGG 307
Acd COG2515
1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family ...
11-319 3.62e-135

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism];


Pssm-ID: 442005 [Multi-domain]  Cd Length: 317  Bit Score: 386.46  E-value: 3.62e-135
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  11 KFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLA 90
Cdd:COG2515    1 RFPRLPLAFLPTPLQPLPRLSAALGVELWIKRDDLTGPAIGGNKTRKLEYLLADALAQGADTLVTFGGAQSNHARATAAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  91 AKKLGLDAILVLRGKE--ELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYV 168
Cdd:COG2515   81 AAKLGLKCVLVLRGEEptPLNGNLLLDRLLGAELHFVSRGEYRDRDEAMEAVAAELRARGGKPYVIPEGGSNPLGALGYV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 169 RAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVR 245
Cdd:COG2515  161 EAAAELAAQLAelgVDFDYIVVASGSGGTLAGLVAGLALLGSDTRVIGISVLKGADFLRERVAELARATAALLGLVSRAD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499186629 246 PEL-YDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL--GEKILFIHTGGISGTFHYGD 319
Cdd:COG2515  241 IELdDDYHGGGYGKPTPELIEAIRLFARTEGILLDPVYTGKAMAGLIDLIRKGRFppGSRVLFIHTGGLPGLFGYAE 317
PRK03910 PRK03910
D-cysteine desulfhydrase; Validated
9-321 1.56e-131

D-cysteine desulfhydrase; Validated


Pssm-ID: 179673  Cd Length: 331  Bit Score: 377.63  E-value: 1.56e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   9 LAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTG 88
Cdd:PRK03910   3 LARFPRLELAGLPTPLEPLPRLSAALGPDIYIKRDDLTGLALGGNKTRKLEFLLADALAQGADTLITAGAIQSNHARQTA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  89 LAAKKLGLDAILVLRGKEELK-------GNYLLDKIMGIETRVYDAKDsfELMKYAEEIAEELKREGRKPYVIPPGGASP 161
Cdd:PRK03910  83 AAAAKLGLKCVLLLENPVPTEaenylanGNVLLDDLFGAEIHVVPAGT--DMDAQLEELAEELRAQGRRPYVIPVGGSNA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 162 IGTLGYVRAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELL 238
Cdd:PRK03910 161 LGALGYVACALEIAQQLAeggVDFDAVVVASGSGGTHAGLAAGLAALGPDIPVIGVTVSRSAAEQEPKVAKLAQATAELL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 239 GVKVEVRPE---LYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL--GEKILFIHTGGIS 312
Cdd:PRK03910 241 GLPTEIPRAdirLWDDYVGPgYGVPTDEMLEAVKLLARTEGILLDPVYTGKAMAGLIDLIRQGRFkkGGNVLFIHTGGAP 320

                 ....*....
gi 499186629 313 GTFHYGDKL 321
Cdd:PRK03910 321 ALFAYADAF 329
PRK12390 PRK12390
1-aminocyclopropane-1-carboxylate deaminase; Provisional
9-310 1.40e-63

1-aminocyclopropane-1-carboxylate deaminase; Provisional


Pssm-ID: 183494  Cd Length: 337  Bit Score: 204.50  E-value: 1.40e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   9 LAKFPRVELIPWETPIQYLPNISREIG--ADVYIKRDDL-TGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAF 85
Cdd:PRK12390   3 LQKFPRYPLTFGPTPIHPLKRLSAHLGgkVELYAKREDCnSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNHTR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  86 VTGLAAKKLGLDAILVlrgKE----------ELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIp 155
Cdd:PRK12390  83 QVAAVAAHLGMKCVLV---QEnwvnyedavyDRVGNILLSRIMGADVRLVPDGFDIGIRKSWEDALEDVRAAGGKPYAI- 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 156 PGGAS--PIGTLGYVRAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNL 230
Cdd:PRK12390 159 PAGASdhPLGGLGFVGFAEEVRAQEAelgFKFDYIVVCSVTGSTQAGMVVGFAADGRARRVIGIDASAKPEQTRAQVLRI 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 231 IKEAAELLGVKVEVRPE----LYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL--GEKIL 304
Cdd:PRK12390 239 ARNTAELVELGRDITEDdvvlDERYAGPEYGLPNEGTLEAIRLCARLEGMLTDPVYEGKSMHGMIDLVRKGEFpeGSKVL 318

                 ....*.
gi 499186629 305 FIHTGG 310
Cdd:PRK12390 319 YAHLGG 324
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
15-309 8.12e-44

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 152.08  E-value: 8.12e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   15 VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGigGNKIRKLEYLLGDALS-KGADVVITVGAvhSNHAFVTGLAAKK 93
Cdd:pfam00291   1 ISLGIGPTPLVRLPRLSKELGVDVYLKLESLNPTG--SFKDRGALNLLLRLKEgEGGKTVVEASS--GNHGRALAAAAAR 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629   94 LGLDAILVLRGKEElKGNYLLDKIMGIETRVYDAkdSFELmkyAEEIAEELKREGRKPYVIPPGGaSPIGTLGYVRAVGE 173
Cdd:pfam00291  77 LGLKVTIVVPEDAP-PGKLLLMRALGAEVVLVGG--DYDE---AVAAARELAAEGPGAYYINQYD-NPLNIEGYGTIGLE 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  174 IATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI------AVGRFGEVMTSKLDNLIKEAAELLGVKVEVRP- 246
Cdd:pfam00291 150 ILEQLGGDPDAVVVPVGGGGLIAGIARGLKELGPDVRVIGVepegapALARSLAAGRPVPVPVADTIADGLGVGDEPGAl 229
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499186629  247 --ELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPvYTGKAFYGLvDLARKGELGEK--ILFIHTG 309
Cdd:pfam00291 230 alDLLDEYVGEvVTVSDEEALEAMRLLARREGIVVEP-SSAAALAAL-KLALAGELKGGdrVVVVLTG 295
Trp-synth-beta_II cd00640
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
22-310 3.34e-34

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


Pssm-ID: 107202 [Multi-domain]  Cd Length: 244  Bit Score: 125.32  E-value: 3.34e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  22 TPIQYLPNISREIGADVYIKRDDLTGlgIGGNKIRKLEYLLGDALSKGADVVITVGAVHS-NHAFVTGLAAKKLGLDAIL 100
Cdd:cd00640    1 TPLVRLKRLSKLGGANIYLKLEFLNP--TGSFKDRGALNLILLAEEEGKLPKGVIIESTGgNTGIALAAAAARLGLKCTI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 101 VLrGKEELKGNYLLDKIMGIETRVYDAKdsfelMKYAEEIAEELKREGRKPYVIPPGgASPIGTLGYVRAVGEIATQS-E 179
Cdd:cd00640   79 VM-PEGASPEKVAQMRALGAEVVLVPGD-----FDDAIALAKELAEEDPGAYYVNQF-DNPANIAGQGTIGLEILEQLgG 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 180 VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGiavgrfgevmtskldnlikeaaellgvkveVRPELYDYSfgeygki 259
Cdd:cd00640  152 QKPDAVVVPVGGGGNIAGIARALKELLPNVKVIG------------------------------VEPEVVTVS------- 194
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 499186629 260 TGEVAQIIRKVGTREGIILDPVyTGKAFYGLVDLARKGELGEKILFIHTGG 310
Cdd:cd00640  195 DEEALEAIRLLAREEGILVEPS-SAAALAAALKLAKKLGKGKTVVVILTGG 244
PRK12483 PRK12483
threonine dehydratase; Reviewed
14-214 1.98e-12

threonine dehydratase; Reviewed


Pssm-ID: 237111 [Multi-domain]  Cd Length: 521  Bit Score: 67.51  E-value: 1.98e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  14 RVELIPWETPIQYLPNISREIGADVYIKRDDLTglGIGGNKIR----KLEYLLGDALSKGadvVITVGAvhSNHAFVTGL 89
Cdd:PRK12483  30 RVYDVARETPLQRAPNLSARLGNQVLLKREDLQ--PVFSFKIRgaynKMARLPAEQLARG---VITASA--GNHAQGVAL 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  90 AAKKLGLDAILVL-RGKEELKgnylLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPYVIPPGGASPiGTLGY 167
Cdd:PRK12483 103 AAARLGVKAVIVMpRTTPQLK----VDGVRAHGGEVVLHGESFpDALAHALKLAEEEGLTFVPPFDDPDVIAGQ-GTVAM 177
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 499186629 168 vravgEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214
Cdd:PRK12483 178 -----EILRQHPGPLDAIFVPVGGGGLIAGIAAYVKYVRPEIKVIGV 219
CBS_like cd01561
CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS ...
22-306 1.08e-10

CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.


Pssm-ID: 107204 [Multi-domain]  Cd Length: 291  Bit Score: 61.38  E-value: 1.08e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  22 TPIQYLPNISREIGADVYIKrddLTGLGIGGN-KIRKLEYLLGDALSKGA----DVVI--TVGavhsNhafvTGLA---- 90
Cdd:cd01561    3 TPLVRLNRLSPGTGAEIYAK---LEFFNPGGSvKDRIALYMIEDAEKRGLlkpgTTIIepTSG----N----TGIGlamv 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  91 AKKLGLDAILVLrgkeelkgnyllDKIMGIETR----------VYDAKDSFELMKYAEEIAEELKREGRKpYVIPPGGAS 160
Cdd:cd01561   72 AAAKGYRFIIVM------------PETMSEEKRkllralgaevILTPEAEADGMKGAIAKARELAAETPN-AFWLNQFEN 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 161 PIGTLGYVRAVG-EIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIR-----PVGIAVGRFGEVMTSKLDnlikea 234
Cdd:cd01561  139 PANPEAHYETTApEIWEQLDGKVDAFVAGVGTGGTITGVARYLKEKNPNVRivgvdPVGSVLFSGGPPGPHKIE------ 212
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499186629 235 aellGVKVEVRPELYDYSFG-EYGKITGEVA-QIIRKVGTREGIILDPVyTGKAFYGLVDLARKGELGEKILFI 306
Cdd:cd01561  213 ----GIGAGFIPENLDRSLIdEVVRVSDEEAfAMARRLAREEGLLVGGS-SGAAVAAALKLAKRLGPGKTIVTI 281
Thr-dehyd cd01562
Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. ...
21-214 2.14e-10

Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.


Pssm-ID: 107205 [Multi-domain]  Cd Length: 304  Bit Score: 60.58  E-value: 2.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  21 ETPIQYLPNISREIGADVYIKRDDLTglGIGGNKIR----KLEYLLGDALSKGadvVITVGAvhSNHAFVTGLAAKKLGL 96
Cdd:cd01562   17 RTPLLTSPTLSELLGAEVYLKCENLQ--KTGSFKIRgaynKLLSLSEEERAKG---VVAASA--GNHAQGVAYAAKLLGI 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  97 DAILVL-RGKEELKgnylLDKI--MGIETRVYDAkDSFELMKYAEEIAEElkrEGRK-------PYVIppGGAspiGTLG 166
Cdd:cd01562   90 PATIVMpETAPAAK----VDATraYGAEVVLYGE-DFDEAEAKARELAEE---EGLTfihpfddPDVI--AGQ---GTIG 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 499186629 167 YvravgEIATQSEvKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214
Cdd:cd01562  157 L-----EILEQVP-DLDAVFVPVGGGGLIAGIATAVKALSPNTKVIGV 198
PRK09224 PRK09224
threonine ammonia-lyase IlvA;
21-214 1.04e-09

threonine ammonia-lyase IlvA;


Pssm-ID: 236417 [Multi-domain]  Cd Length: 504  Bit Score: 59.38  E-value: 1.04e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  21 ETPIQYLPNISREIGADVYIKRDDLTGlgIGGNKIR----KLEYLLGDALSKGadvVITVGAvhSNHAFVTGLAAKKLGL 96
Cdd:PRK09224  20 ETPLEKAPKLSARLGNQVLLKREDLQP--VFSFKLRgaynKMAQLTEEQLARG---VITASA--GNHAQGVALSAARLGI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  97 DAILVL-RGKEELKgnylLDKIMGIETRVYDAKDSF-ELMKYAEEIAEElkrEGR-------KPYVIppGGAspiGTLGY 167
Cdd:PRK09224  93 KAVIVMpVTTPDIK----VDAVRAFGGEVVLHGDSFdEAYAHAIELAEE---EGLtfihpfdDPDVI--AGQ---GTIAM 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 499186629 168 vravgEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214
Cdd:PRK09224 161 -----EILQQHPHPLDAVFVPVGGGGLIAGVAAYIKQLRPEIKVIGV 202
IlvA COG1171
Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the ...
21-214 1.41e-09

Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 440784 [Multi-domain]  Cd Length: 327  Bit Score: 58.12  E-value: 1.41e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  21 ETPIQYLPNISREIGADVYIKRDDL--TG----LGiGGNKIRKLEyllGDALSKGadvVITvgavHS--NHAFVTGLAAK 92
Cdd:COG1171   24 RTPLLRSPTLSERLGAEVYLKLENLqpTGsfklRG-AYNALASLS---EEERARG---VVA----ASagNHAQGVAYAAR 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  93 KLGLDAILVL-RGKEELKgnylLDKI--MGIETRVYDakDSF-ELMKYAEEIAEElkrEGRkpYVIPPGGASPI----GT 164
Cdd:COG1171   93 LLGIPATIVMpETAPAVK----VAATraYGAEVVLHG--DTYdDAEAAAAELAEE---EGA--TFVHPFDDPDViagqGT 161
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 499186629 165 LGYvravgEIATQSEvKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214
Cdd:COG1171  162 IAL-----EILEQLP-DLDAVFVPVGGGGLIAGVAAALKALSPDIRVIGV 205
PRK06815 PRK06815
threonine/serine dehydratase;
21-279 4.61e-09

threonine/serine dehydratase;


Pssm-ID: 180709 [Multi-domain]  Cd Length: 317  Bit Score: 56.62  E-value: 4.61e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  21 ETPIQYLPNISREIGADVYIKRDDLTglGIGGNKIR----KLEYLLGDALSKGadvVITvgAVHSNHAFVTGLAAKKLGL 96
Cdd:PRK06815  20 VTPLEHSPLLSQHTGCEVYLKCEHLQ--HTGSFKFRgasnKLRLLNEAQRQQG---VIT--ASSGNHGQGVALAAKLAGI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  97 DA-ILVLRGKEELKgnylLDKI--MGIETRVYDAkDSFELMKYAEEIAEElkrEGrKPYVIP---PGGASPIGTLGYvra 170
Cdd:PRK06815  93 PVtVYAPEQASAIK----LDAIraLGAEVRLYGG-DALNAELAARRAAEQ---QG-KVYISPyndPQVIAGQGTIGM--- 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 171 vgEIATQSEvKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAvGRFGEVMTSKLdnlikEAAELlgVKVEVRPELYD 250
Cdd:PRK06815 161 --ELVEQQP-DLDAVFVAVGGGGLISGIATYLKTLSPKTEIIGCW-PANSPSLYTSL-----EAGEI--VEVAEQPTLSD 229
                        250       260       270
                 ....*....|....*....|....*....|...
gi 499186629 251 YSFG--EYGKITGEVAQ--IIRKVGTREGIILD 279
Cdd:PRK06815 230 GTAGgvEPGAITFPLCQqlIDQKVLVSEEEIKE 262
PLN02550 PLN02550
threonine dehydratase
21-214 2.53e-08

threonine dehydratase


Pssm-ID: 178165 [Multi-domain]  Cd Length: 591  Bit Score: 55.31  E-value: 2.53e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  21 ETPIQYLPNISREIGADVYIKRDDLTglGIGGNKIR----KLEYLLGDALSKGadvVITVGAvhSNHAFVTGLAAKKLGL 96
Cdd:PLN02550 109 ESPLQLAKKLSERLGVKVLLKREDLQ--PVFSFKLRgaynMMAKLPKEQLDKG---VICSSA--GNHAQGVALSAQRLGC 181
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  97 DAILVLR-GKEELKGNYlLDKIMGIETRVYDAKDsfELMKYAEEIAEElkrEGRKpyVIPPGGASPI----GTLGYvrav 171
Cdd:PLN02550 182 DAVIAMPvTTPEIKWQS-VERLGATVVLVGDSYD--EAQAYAKQRALE---EGRT--FIPPFDHPDViagqGTVGM---- 249
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 499186629 172 gEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214
Cdd:PLN02550 250 -EIVRQHQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKIIGV 291
PRK10717 PRK10717
cysteine synthase A; Provisional
116-212 7.04e-05

cysteine synthase A; Provisional


Pssm-ID: 182672 [Multi-domain]  Cd Length: 330  Bit Score: 44.08  E-value: 7.04e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629 116 KIMGIETRVYDA---KDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVG-EIATQSEVKFDSIVVAAGS 191
Cdd:PRK10717 107 RALGAELVLVPAapyANPNNYVKGAGRLAEELVASEPNGAIWANQFDNPANREAHYETTGpEIWEQTDGKVDGFVCAVGT 186
                         90       100
                 ....*....|....*....|.
gi 499186629 192 GGTLAGLSLGLSILNEDIRPV 212
Cdd:PRK10717 187 GGTLAGVSRYLKETNPKVKIV 207
PRK08639 PRK08639
threonine dehydratase; Validated
21-199 3.28e-04

threonine dehydratase; Validated


Pssm-ID: 236318 [Multi-domain]  Cd Length: 420  Bit Score: 42.10  E-value: 3.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  21 ETPIQYLPNISREIGADVYIKRDDLTGL---GIGG--NKIRKLEyllGDALSKGadvviTVGAVHSNHAFVTGLAAKKLG 95
Cdd:PRK08639  25 ETPLQRNDYLSEKYGANVYLKREDLQPVrsyKLRGayNAISQLS---DEELAAG-----VVCASAGNHAQGVAYACRHLG 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499186629  96 LDAILVL--------RGKEELKGNYLLDKIMGIETrvYDakDSF-ELMKYAEEiaeelkrEGRkpYVIPPGGASPI---- 162
Cdd:PRK08639  97 IPGVIFMpvttpqqkIDQVRFFGGEFVEIVLVGDT--FD--DSAaAAQEYAEE-------TGA--TFIPPFDDPDViagq 163
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 499186629 163 GTLGYvravgEIATQ--SEVKFDSIVVAAGSGGTLAGLS 199
Cdd:PRK08639 164 GTVAV-----EILEQleKEGSPDYVFVPVGGGGLISGVT 197
PLN02356 PLN02356
phosphateglycerate kinase
173-210 5.96e-03

phosphateglycerate kinase


Pssm-ID: 215204  Cd Length: 423  Bit Score: 38.05  E-value: 5.96e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 499186629 173 EIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIR 210
Cdd:PLN02356 242 EIWEQTQGNLDAFVAAAGTGGTLAGVSRFLQEKNPNIK 279
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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