|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15082 |
PRK15082 |
glutathione ABC transporter permease GsiD; Provisional |
3-303 |
0e+00 |
|
glutathione ABC transporter permease GsiD; Provisional
Pssm-ID: 185040 [Multi-domain] Cd Length: 301 Bit Score: 582.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 3 LLNWRRQAAINAMPGIKPGQIRTPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAENYFDYDRLNDGPSMMH 82
Cdd:PRK15082 1 LFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHVALVAGLFVLLLIVVAIFAPWIAPYDAENYFDYDALNAGPSLQH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 83 WFGVDSLGRDIFSRVLVGAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGS 162
Cdd:PRK15082 81 WFGVDSLGRDIFSRILVGARISLAAGFFSVAIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAILGS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 163 GMSNVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSF 242
Cdd:PRK15082 161 GMANVIIAVAIFSIPAFARLVRGNTLVLKQQTYIESARSIGASDWTILLRHILPGTVSSIVVYFTMRIGTSIITAASLSF 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497339624 243 LGLGAQPPTPEWGAMLNEARADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALDPRIKG 303
Cdd:PRK15082 241 LGLGAQPPTPEWGAMLNEARADMVIAPHVALFPSLAIFLTVLAFNLLGDGLRDALDPKIKG 301
|
|
| DppC |
COG1173 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
24-298 |
2.04e-123 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 354.03 E-value: 2.04e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 24 RTPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAeNYFDYDRLNDGPSMMHWFGVDSLGRDIFSRVLVGAQI 103
Cdd:COG1173 2 RSRWRRAWRRLRRNPLAVIGLVILLLLVLLALFAPLLAPYDP-TAQDLAARLQPPSAAHWLGTDQLGRDVLSRLLYGARI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 104 SLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFARLV 183
Cdd:COG1173 81 SLLVGLLAVLIALVIGVLLGLLAGYFGGWVDAVLMRLVDVLLAFPSLLLAIALVAVLGPGLLNVILALGLTGWPGYARLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 184 RGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARA 263
Cdd:COG1173 161 RAQVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAILAEAGLSFLGLGVQPPTPSWGTMLSEGRN 240
|
250 260 270
....*....|....*....|....*....|....*
gi 497339624 264 DMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALD 298
Cdd:COG1173 241 YLLTAPWLALFPGLAIVLTVLAFNLLGDGLRDALD 275
|
|
| nickel_nikC |
TIGR02790 |
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of ... |
43-298 |
1.64e-83 |
|
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of nickel ABC transporter permeases. Operons that contain this protein also contain a homologous permease subunit NikB. Nickel is used in cells as part of urease or certain hydrogenases or superoxide dismutases. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 131837 [Multi-domain] Cd Length: 258 Bit Score: 251.92 E-value: 1.64e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 43 AGVFVLLLIAVAIVAPWIAPFDAENYFDYDRLNdGPSMMHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVFIGAAIGTVL 122
Cdd:TIGR02790 4 ALLIIAVLFLLAIFAPWIAPHDPLAQNLPMRLL-GPSMEYWLGTDHLGRCIFSRLIFGARVSLGSALLVLGLVLTIGLLI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 123 GLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSI 202
Cdd:TIGR02790 83 GGLAGYIGGRVDEAIMRVCDVFLSFPTIILSLAIVGILGPGLENVIIAIVLVHWAWYARMVRGMVVSLKQREFVLAARTS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 203 GASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVMAPHVALFPAIAIFLT 282
Cdd:TIGR02790 163 GASHWQIIRRHILPNILSPIIVLATLDIGHVILHIAGLSFLGLGIQPPTPEWGAMLSEAKQYIWTQPLLMIYPGLAILIS 242
|
250
....*....|....*.
gi 497339624 283 VLAFNLLGDGLRDALD 298
Cdd:TIGR02790 243 VMAFNLLGDALRDHLG 258
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
101-283 |
2.64e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 80.79 E-value: 2.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 101 AQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGS--------GMSNVIIAVA 172
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVllgwgilpGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 173 IFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAqPPTP 252
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGE-APGP 159
|
170 180 190
....*....|....*....|....*....|.
gi 497339624 253 EWGAMLNEARADMVMAPHVALFPAIAIFLTV 283
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
119-302 |
6.94e-17 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 76.95 E-value: 6.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 119 GTVLGLLAGYYEGWW-DRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNV----IIAVAIFSIPAFARLVRGNTLVLKQQ 193
Cdd:pfam00528 1 GIPLGIIAALRRGRRlDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHgilpAIILALLGWAGYARLIRRAALRSLPS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 194 TFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFL----GLGAQPPTPEWGAMLNEaradmvmap 269
Cdd:pfam00528 81 DLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILGYDYPE--------- 151
|
170 180 190
....*....|....*....|....*....|...
gi 497339624 270 hvALFPAIAIFLTVLAFNLLGDGLRDALDPRIK 302
Cdd:pfam00528 152 --IQGPVLAAALILLLLNLLVDILQRLLDPRVR 182
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15082 |
PRK15082 |
glutathione ABC transporter permease GsiD; Provisional |
3-303 |
0e+00 |
|
glutathione ABC transporter permease GsiD; Provisional
Pssm-ID: 185040 [Multi-domain] Cd Length: 301 Bit Score: 582.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 3 LLNWRRQAAINAMPGIKPGQIRTPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAENYFDYDRLNDGPSMMH 82
Cdd:PRK15082 1 LFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHVALVAGLFVLLLIVVAIFAPWIAPYDAENYFDYDALNAGPSLQH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 83 WFGVDSLGRDIFSRVLVGAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGS 162
Cdd:PRK15082 81 WFGVDSLGRDIFSRILVGARISLAAGFFSVAIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAILGS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 163 GMSNVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSF 242
Cdd:PRK15082 161 GMANVIIAVAIFSIPAFARLVRGNTLVLKQQTYIESARSIGASDWTILLRHILPGTVSSIVVYFTMRIGTSIITAASLSF 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497339624 243 LGLGAQPPTPEWGAMLNEARADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALDPRIKG 303
Cdd:PRK15082 241 LGLGAQPPTPEWGAMLNEARADMVIAPHVALFPSLAIFLTVLAFNLLGDGLRDALDPKIKG 301
|
|
| DppC |
COG1173 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
24-298 |
2.04e-123 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 354.03 E-value: 2.04e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 24 RTPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAeNYFDYDRLNDGPSMMHWFGVDSLGRDIFSRVLVGAQI 103
Cdd:COG1173 2 RSRWRRAWRRLRRNPLAVIGLVILLLLVLLALFAPLLAPYDP-TAQDLAARLQPPSAAHWLGTDQLGRDVLSRLLYGARI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 104 SLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFARLV 183
Cdd:COG1173 81 SLLVGLLAVLIALVIGVLLGLLAGYFGGWVDAVLMRLVDVLLAFPSLLLAIALVAVLGPGLLNVILALGLTGWPGYARLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 184 RGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARA 263
Cdd:COG1173 161 RAQVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAILAEAGLSFLGLGVQPPTPSWGTMLSEGRN 240
|
250 260 270
....*....|....*....|....*....|....*
gi 497339624 264 DMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALD 298
Cdd:COG1173 241 YLLTAPWLALFPGLAIVLTVLAFNLLGDGLRDALD 275
|
|
| nickel_nikC |
TIGR02790 |
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of ... |
43-298 |
1.64e-83 |
|
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of nickel ABC transporter permeases. Operons that contain this protein also contain a homologous permease subunit NikB. Nickel is used in cells as part of urease or certain hydrogenases or superoxide dismutases. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 131837 [Multi-domain] Cd Length: 258 Bit Score: 251.92 E-value: 1.64e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 43 AGVFVLLLIAVAIVAPWIAPFDAENYFDYDRLNdGPSMMHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVFIGAAIGTVL 122
Cdd:TIGR02790 4 ALLIIAVLFLLAIFAPWIAPHDPLAQNLPMRLL-GPSMEYWLGTDHLGRCIFSRLIFGARVSLGSALLVLGLVLTIGLLI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 123 GLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSI 202
Cdd:TIGR02790 83 GGLAGYIGGRVDEAIMRVCDVFLSFPTIILSLAIVGILGPGLENVIIAIVLVHWAWYARMVRGMVVSLKQREFVLAARTS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 203 GASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVMAPHVALFPAIAIFLT 282
Cdd:TIGR02790 163 GASHWQIIRRHILPNILSPIIVLATLDIGHVILHIAGLSFLGLGIQPPTPEWGAMLSEAKQYIWTQPLLMIYPGLAILIS 242
|
250
....*....|....*.
gi 497339624 283 VLAFNLLGDGLRDALD 298
Cdd:TIGR02790 243 VMAFNLLGDALRDHLG 258
|
|
| PRK09881 |
PRK09881 |
D,D-dipeptide ABC transporter permease; |
22-303 |
1.18e-76 |
|
D,D-dipeptide ABC transporter permease;
Pssm-ID: 182131 [Multi-domain] Cd Length: 296 Bit Score: 235.87 E-value: 1.18e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 22 QIRTPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAENYFDYDRLNdGPSMMHWFGVDSLGRDIFSRVLVGA 101
Cdd:PRK09881 15 QTRFNGAKLVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLL-PPSAAHWFGTDEVGRDLFSRVLVGS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 102 QISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFAR 181
Cdd:PRK09881 94 QQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVR 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 182 LVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEA 261
Cdd:PRK09881 174 LARGQALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANG 253
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 497339624 262 RADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALDPRIKG 303
Cdd:PRK09881 254 RNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGG 295
|
|
| nikC |
PRK10417 |
nickel transporter permease NikC; Provisional |
35-303 |
2.25e-75 |
|
nickel transporter permease NikC; Provisional
Pssm-ID: 236687 [Multi-domain] Cd Length: 272 Bit Score: 231.87 E-value: 2.25e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 35 RGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAEnYFDYDRLNDGPSMMHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVFI 114
Cdd:PRK10417 1 SSRWSVRLALIIIALLALIALTSQWWLPYDPQ-AIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAGTRVSLGSVMACLLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 115 GAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFARLVRGNTLVLKQQT 194
Cdd:PRK10417 80 VLALGLVIGGSAGLLGGRVDQATMRVADMFMTFPTSILAFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 195 FIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVMAPHVALF 274
Cdd:PRK10417 160 FVLAARLSGAGHVRVFIDHLLPAVIPQLLVLATLDIGHMMLHVAGLSFLGLGVTAPTAEWGVMINDARQYIWTQPLLMFW 239
|
250 260
....*....|....*....|....*....
gi 497339624 275 PAIAIFLTVLAFNLLGDGLRDALDPRIKG 303
Cdd:PRK10417 240 PGLALFISVMAFNLLGDALRDHLDPHLVT 268
|
|
| PRK10913 |
PRK10913 |
dipeptide ABC transporter permease DppC; |
25-302 |
1.14e-67 |
|
dipeptide ABC transporter permease DppC;
Pssm-ID: 182833 [Multi-domain] Cd Length: 300 Bit Score: 213.11 E-value: 1.14e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 25 TPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAENYFDYDRL-----NDGPSMMHWFGVDSLGRDIFSRVLV 99
Cdd:PRK10913 17 TPLQEFWHYFKRNKGAVVGLVYVVIMLFIAIFANWIAPHNPAEQFRDALLappvwQEGGSWAHILGTDDVGRDVLSRLMY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 100 GAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAF 179
Cdd:PRK10913 97 GARLSLLVGCLVVVLSLVMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIVNAALALTFVALPHY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 180 ARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLN 259
Cdd:PRK10913 177 VRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLS 256
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 497339624 260 EARADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALDPRIK 302
Cdd:PRK10913 257 DVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLK 299
|
|
| SapC |
COG4171 |
ABC-type antimicrobial peptide export system, permease component SapC [Defense mechanisms]; |
22-302 |
2.93e-67 |
|
ABC-type antimicrobial peptide export system, permease component SapC [Defense mechanisms];
Pssm-ID: 443331 [Multi-domain] Cd Length: 296 Bit Score: 211.98 E-value: 2.93e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 22 QIRTPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAENYFDYDRL-----NDGPSMMHWFGVDSLGRDIFSR 96
Cdd:COG4171 11 RIPSPLKQIWQSFRKNPLAMIGLYGFLFLILLALFGPLLAPYSPDQQFIGALLlppswDDNGDVSFFLGTDDLGRDILSR 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 97 VLVGAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSI 176
Cdd:COG4171 91 LLYGARYTFGSALLVVLAAAIIGGIIGILAGMSRGLKSSILNHLLDTLLSIPSLLLAIIIVALLGPGLENAMLAITLALL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 177 PAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGA 256
Cdd:COG4171 171 PQFIHAIYQAVHQELKKEYVLAARLDGASNWQLLRYSILPNILEVLVTELTRALSIAILDISALGFLGLGAQLPSPEWGA 250
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 497339624 257 MLNEARADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALDPRIK 302
Cdd:COG4171 251 MLGDSLELIYLAPWTVILPGLAIMFSVLIVNLVGDGLRRALNKGVE 296
|
|
| PRK15406 |
PRK15406 |
oligopeptide ABC transporter permease OppC; Provisional |
24-300 |
9.71e-58 |
|
oligopeptide ABC transporter permease OppC; Provisional
Pssm-ID: 185304 [Multi-domain] Cd Length: 302 Bit Score: 187.74 E-value: 9.71e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 24 RTPWHEFWRRFRGQPVAMgAGVFVLLLIAV-AIVAPWIAPFDAENYfDYDRLNDGPSMM--HWFGVDSLGRDIFSRVLVG 100
Cdd:PRK15406 23 RSLWQDARRRFMHNRAAV-ASLIVLVLIALfVILAPMLSQFAYDDT-DWGMMSSAPDMEsgHYFGTDSSGRDLLVRVAIG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 101 AQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFA 180
Cdd:PRK15406 101 GRISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 181 RLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNE 260
Cdd:PRK15406 181 RIVRGQTLSLKRKEFIEAAQVGGVSTRGIVLRHIVPNVLGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSD 260
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 497339624 261 ARADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALDPR 300
Cdd:PRK15406 261 GANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK 300
|
|
| PRK15111 |
PRK15111 |
peptide ABC transporter permease SapC; |
25-298 |
1.72e-46 |
|
peptide ABC transporter permease SapC;
Pssm-ID: 185066 [Multi-domain] Cd Length: 296 Bit Score: 158.33 E-value: 1.72e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 25 TPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAENYF-DYDRLNdgPSMMHW------FGVDSLGRDIFSRV 97
Cdd:PRK15111 14 GTLRTAWRKFYSDALAMVGLYGCAGLALLCLFGGWLAPYGIDQQFlGYQLLP--PSWSRYgevsffLGTDDLGRDVLSRL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 98 LVGAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIP 177
Cdd:PRK15111 92 LSGAAPTVGGAFVVTLAATLCGLVLGVFAGATHGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPSLSHAMFAVWLALLP 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 178 AFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAM 257
Cdd:PRK15111 172 RMVRSIYSAVHDELEKEYVIAARLDGASTLNILWYAVLPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAM 251
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 497339624 258 LNEARADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALD 298
Cdd:PRK15111 252 LGDSLELIYVAPWTVMLPGAAIMLSVLLVNLLGDGIRRAII 292
|
|
| YejE |
COG4239 |
ABC-type microcin C transport system, permease component YejE [Secondary metabolites ... |
78-300 |
3.99e-45 |
|
ABC-type microcin C transport system, permease component YejE [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 443381 [Multi-domain] Cd Length: 342 Bit Score: 156.08 E-value: 3.99e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 78 PSMMHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVV 157
Cdd:COG4239 117 PSAENWLGTDDQGRDVLARLIYGFRISVLFGLALTVISSVIGVAAGAVQGYFGGRVDLLFQRFIEIWSSMPELYLLIILS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 158 AVMGSGMSNVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISA 237
Cdd:COG4239 197 SIFQPSFWLLLGILLLFGWMGLVGVVRAEFLRARNLEYVRAARALGVSDRRIMFRHILPNAMVATLTFLPFILSGAITTL 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497339624 238 ASLSFLGLGAQPPTPEWGAMLNEARADMVmAPHVAL--FPAIAIFLTVLAFnlLGDGLRDALDPR 300
Cdd:COG4239 277 TSLDFLGFGLPPGSPSLGELLAQGKNNLQ-APWLGLsaFVVLALMLSLLVF--IGEAVRDAFDPR 338
|
|
| PRK15021 |
PRK15021 |
microcin C ABC transporter permease; Provisional |
78-299 |
1.56e-29 |
|
microcin C ABC transporter permease; Provisional
Pssm-ID: 184982 [Multi-domain] Cd Length: 341 Bit Score: 114.70 E-value: 1.56e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 78 PSMMHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVV 157
Cdd:PRK15021 117 PSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 158 AVMGSGMSNVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISA 237
Cdd:PRK15021 197 SVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 497339624 238 ASLSFLGLGAQPPTPEWGAMLNEARADMvMAP--HVALFPAIAIFLTVLAFnlLGDGLRDALDP 299
Cdd:PRK15021 277 TSLDFLGFGLPLGSPSLGELLLQGKNNL-QAPwlGITAFLSVAILLSLLIF--IGEAVRDAFDP 337
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
101-283 |
2.64e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 80.79 E-value: 2.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 101 AQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGS--------GMSNVIIAVA 172
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVllgwgilpGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 173 IFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAqPPTP 252
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGE-APGP 159
|
170 180 190
....*....|....*....|....*....|.
gi 497339624 253 EWGAMLNEARADMVMAPHVALFPAIAIFLTV 283
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
119-302 |
6.94e-17 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 76.95 E-value: 6.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 119 GTVLGLLAGYYEGWW-DRIIMRICDVLFAFPGILLAIAVVAVMGSGMSNV----IIAVAIFSIPAFARLVRGNTLVLKQQ 193
Cdd:pfam00528 1 GIPLGIIAALRRGRRlDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHgilpAIILALLGWAGYARLIRRAALRSLPS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 194 TFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFL----GLGAQPPTPEWGAMLNEaradmvmap 269
Cdd:pfam00528 81 DLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILGYDYPE--------- 151
|
170 180 190
....*....|....*....|....*....|...
gi 497339624 270 hvALFPAIAIFLTVLAFNLLGDGLRDALDPRIK 302
Cdd:pfam00528 152 --IQGPVLAAALILLLLNLLVDILQRLLDPRVR 182
|
|
| DppB |
COG0601 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
89-302 |
9.61e-14 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440366 [Multi-domain] Cd Length: 314 Bit Score: 70.10 E-value: 9.61e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 89 LGRDIFSRVLVGAQI------SLAAGVLAVFIGAAIGTVLGLLAGYYEG-WWDRIIMRICDVLFAFPGILLAIAVVAVMG 161
Cdd:COG0601 77 LGTSFVYGRPVSDLIaerlpvTLELALLALLLALLIGIPLGILAALRRGsWLDRLITVLALLGISIPSFWLGLLLILLFA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 162 --------SGMSNV--------------IIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFNHILPGTV 219
Cdd:COG0601 157 vklgwlpvSGRVSPwedfldalrhlilpALTLALGSLAGIARLTRSSMLEVLGQDYVRTARAKGLSERRVLLRHALRNAL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 220 SSIVVYFTMRIGvSIISAASL-----SFLGLgaqpptpewGAMLNEA--RAD--MVMAphVALFPAIAifltVLAFNLLG 290
Cdd:COG0601 237 IPVVTVLGLQLG-GLLGGAVVvetvfSWPGL---------GRLLVDAilNRDypVVQG--IVLLIAVL----VVLVNLLV 300
|
250
....*....|..
gi 497339624 291 DGLRDALDPRIK 302
Cdd:COG0601 301 DLLYALLDPRIR 312
|
|
| OppC_N |
pfam12911 |
N-terminal TM domain of oligopeptide transport permease C; Oligopeptide permeases (Opp) have ... |
25-74 |
4.20e-11 |
|
N-terminal TM domain of oligopeptide transport permease C; Oligopeptide permeases (Opp) have been identified in numerous gram-negative and -positive bacteria. These transport systems belong to the superfamily of highly conserved ATP-binding cassette transporters. Typically, Opp importers comprise a complex of five proteins. The oligopeptide-binding protein OppA is responsible for the capture of peptides from the external medium. Two integral highly hydrophobic membrane spanning proteins, OppB and OppC, form a channel through the membrane used for peptide translocation. This N-terminal domain appears to be the first TM domain of the molecule.
Pssm-ID: 463747 [Multi-domain] Cd Length: 53 Bit Score: 57.04 E-value: 4.20e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 497339624 25 TPWHEFWRRFRGQPVAMGAGVFVLLLIAVAIVAPWIAPFDAENYFDYDRL 74
Cdd:pfam12911 1 SPWQDAWRRFRRNKLAMVGLVILLLLVLLAIFAPLLAPYDPDQQDLSADL 50
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
45-246 |
3.06e-08 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 53.31 E-value: 3.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 45 VFVLLLIAVAIVAPWIAPFDaenyFDYDRLNDGPSMMHWFGVDSLGRDI--FSRVLVGAQISLAAGVLAVFIGAAIGTVL 122
Cdd:TIGR01097 6 RIWLLALLVALYVWAFALLG----FDLARLLAGPGQMADLLGRMFPPDWsyLPRILKALLETLAMAILGTVLAAVLAVPL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 123 GLLA--GYYEGWWDRIIMR-ICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFARLVrGNTLVLKQQTFIESA 199
Cdd:TIGR01097 82 ALLAarNITPSPWLYGLARlLLNFLRAIPELVWALIFVAAVGLGPFAGVLALAFHTVGFLGKLF-AEAIEEVDPGPVEAL 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 497339624 200 RSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLG 246
Cdd:TIGR01097 161 RATGASKLQVIRYGVLPQVLPQFLSYTLYRFEINVRAAAVLGLVGAG 207
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
86-234 |
1.69e-06 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 48.22 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 86 VDSLGRDIFSRVLVGA-QISLAAGVLAVFIGAAIGTVLGLLAGYYEgWWDRIIMRICDVLFAFPGILLAIAVVAVMGSGM 164
Cdd:COG0600 47 LAALVELLASGELWEHlLASLLRVLLGFALAALLGVPLGLLLGLSR-LLRRLLDPLLVFLRPIPPLALAPLLILWFGIGE 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 497339624 165 SNVIIAVAIFSIPAFARlvrgNTLV-LKQ--QTFIESARSIGASDATILFNHILPGTVSSIVVyfTMRIGVSI 234
Cdd:COG0600 126 ASKIFVIFLGAFFPILL----NTAAgVRSvdPELLELARSLGASRWQILRKVVLPAALPYIFT--GLRIALGL 192
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
95-243 |
1.25e-05 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 45.87 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 95 SRVLVGAQISLAAGVLAVFIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAVMGS-----GMSNVII 169
Cdd:COG1177 57 PRLLDALLNSLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSAlglsgGLWGLIL 136
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 497339624 170 AVAIFSIPAFARLVRgNTLVLKQQTFIESARSIGASDATILFNHILPGtvssivvyftmrIGVSIISAASLSFL 243
Cdd:COG1177 137 AHVVFTLPFVVLVVL-ARLQGFDPSLEEAARDLGASPWQTFRRVTLPL------------IAPGILAGALLAFT 197
|
|
| PhnE |
COG3639 |
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
45-246 |
1.15e-04 |
|
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 42.76 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 45 VFVLLLIAVAIVAPWIAPFDAEnyfdydRLNDGPSMMHWFGVDSLGRDI--FSRVLVGAQISLAAGVLAVFIGAAIGTVL 122
Cdd:COG3639 1 LLLLALLALLVWSLWGLEFDLG------RLIDGLPNLADFLSRFFPPDWsyLPDLLSALLETLAIALLGTLLGAVLALPL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 123 GLLA--GYYEGWWDRIIMR-ICDVLFAFPGILLAIAVVAVMGSGMSNVIIAVAIFSIPAFARLVrGNTLVLKQQTFIESA 199
Cdd:COG3639 75 AFLAarNLAPNPWVRLLARrLLNVLRAIPELVWALIFVAAVGLGPFAGVLALAIHTIGFLGKLF-AEAIEEIDPGPVEAL 153
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 497339624 200 RSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLG 246
Cdd:COG3639 154 RATGASRLQVIRYGVLPQVLPQFLSYTLYRFEINIRAATVLGLVGAG 200
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
104-223 |
3.72e-03 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 38.51 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497339624 104 SLAAGVLAVFIGAAIGTVLGLLAGYY------EGWWDRIIMRICDVLFAFPGILLAI----AVVAVMG--SGMSNViIAV 171
Cdd:PRK11268 82 AIAGSGLLILWATVVGTPLGIMAGIYlaeygrKSWLAEVIRFINDILLSAPSIVVGLfvytIVVAQMEhfSGWAGV-IAL 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 497339624 172 AIFSIPAFARLVRgNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIV 223
Cdd:PRK11268 161 ALLQIPIVIRTTE-NMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIM 211
|
|
| |
