MULTISPECIES: smalltalk protein [Bacteroides]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| DUF6486 super family | cl41494 | Family of unknown function (DUF6486); This family of proteins is functionally uncharacterized. ... |
3-33 | 9.55e-04 | ||
Family of unknown function (DUF6486); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 30 amino acids in length. There is a conserved IAVASA sequence motif. The actual alignment was detected with superfamily member pfam20096: Pssm-ID: 455109 Cd Length: 31 Bit Score: 31.35 E-value: 9.55e-04
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| Name | Accession | Description | Interval | E-value | ||
| DUF6486 | pfam20096 | Family of unknown function (DUF6486); This family of proteins is functionally uncharacterized. ... |
3-33 | 9.55e-04 | ||
Family of unknown function (DUF6486); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 30 amino acids in length. There is a conserved IAVASA sequence motif. Pssm-ID: 437928 Cd Length: 31 Bit Score: 31.35 E-value: 9.55e-04
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| smalltalk | NF033879 | smalltalk protein; Smalltalk is a membrane-associated protein of very small size (less than 35 ... |
4-31 | 1.11e-03 | ||
smalltalk protein; Smalltalk is a membrane-associated protein of very small size (less than 35 amino acids), found broadly in Bacteroides and Prevotella, both of which are prevalent in human gut microbiomes. Genomic context suggests a role in crosstalk in the gut microbiome, whether that involve toxins and immunity, signaling, or some other form of interaction. The family was identified and discussed by Sberro, et al., in a screen for overlooked small proteins encoded within human microbiomes, and named smalltalk here for its small size and cross-talk role. Pssm-ID: 411442 Cd Length: 29 Bit Score: 31.29 E-value: 1.11e-03
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| Name | Accession | Description | Interval | E-value | ||
| DUF6486 | pfam20096 | Family of unknown function (DUF6486); This family of proteins is functionally uncharacterized. ... |
3-33 | 9.55e-04 | ||
Family of unknown function (DUF6486); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 30 amino acids in length. There is a conserved IAVASA sequence motif. Pssm-ID: 437928 Cd Length: 31 Bit Score: 31.35 E-value: 9.55e-04
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| smalltalk | NF033879 | smalltalk protein; Smalltalk is a membrane-associated protein of very small size (less than 35 ... |
4-31 | 1.11e-03 | ||
smalltalk protein; Smalltalk is a membrane-associated protein of very small size (less than 35 amino acids), found broadly in Bacteroides and Prevotella, both of which are prevalent in human gut microbiomes. Genomic context suggests a role in crosstalk in the gut microbiome, whether that involve toxins and immunity, signaling, or some other form of interaction. The family was identified and discussed by Sberro, et al., in a screen for overlooked small proteins encoded within human microbiomes, and named smalltalk here for its small size and cross-talk role. Pssm-ID: 411442 Cd Length: 29 Bit Score: 31.29 E-value: 1.11e-03
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| Blast search parameters | ||||
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