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Conserved domains on  [gi|490456881|ref|WP_004327638|]
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DUF4373 domain-containing protein [Alistipes putredinis]

Protein Classification

DUF4373 domain-containing protein( domain architecture ID 10626452)

DUF4373 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4373 pfam14297
Domain of unknown function (DUF4373); This domain is found in bacteria, eukaryotes and viruses, ...
 18-102 7.69e-22

Domain of unknown function (DUF4373); This domain is found in bacteria, eukaryotes and viruses, and is approximately 90 amino acids in length.


:

Pssm-ID: 433848  Cd Length: 88  Bit Score: 88.09  E-value: 7.69e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490456881   18 YLDIRIRRLVKAFGCDGIAVYDYLLCNIYRVKGCFAAWDESTAFNVA-EYLRLKESVVLEIVRYCGVVGLFNKELLS-RG 95
Cdd:pfam14297   2 FSDDKIRRLRAEYGAKGYAIYIYLLCEIYREDGYYIEWDEDQLLLLAdKYYGVDPEDVEEIINYCVEYGLFDKELFEkYG 81


                  ....*..
gi 490456881   96 IITSAAI 102
Cdd:pfam14297  82 ILTSAGI 88
 
Name Accession Description Interval E-value
DUF4373 pfam14297
Domain of unknown function (DUF4373); This domain is found in bacteria, eukaryotes and viruses, ...
 18-102 7.69e-22

Domain of unknown function (DUF4373); This domain is found in bacteria, eukaryotes and viruses, and is approximately 90 amino acids in length.


Pssm-ID: 433848  Cd Length: 88  Bit Score: 88.09  E-value: 7.69e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490456881   18 YLDIRIRRLVKAFGCDGIAVYDYLLCNIYRVKGCFAAWDESTAFNVA-EYLRLKESVVLEIVRYCGVVGLFNKELLS-RG 95
Cdd:pfam14297   2 FSDDKIRRLRAEYGAKGYAIYIYLLCEIYREDGYYIEWDEDQLLLLAdKYYGVDPEDVEEIINYCVEYGLFDKELFEkYG 81


                  ....*..
gi 490456881   96 IITSAAI 102
Cdd:pfam14297  82 ILTSAGI 88
 
Name Accession Description Interval E-value
DUF4373 pfam14297
Domain of unknown function (DUF4373); This domain is found in bacteria, eukaryotes and viruses, ...
 18-102 7.69e-22

Domain of unknown function (DUF4373); This domain is found in bacteria, eukaryotes and viruses, and is approximately 90 amino acids in length.


Pssm-ID: 433848  Cd Length: 88  Bit Score: 88.09  E-value: 7.69e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490456881   18 YLDIRIRRLVKAFGCDGIAVYDYLLCNIYRVKGCFAAWDESTAFNVA-EYLRLKESVVLEIVRYCGVVGLFNKELLS-RG 95
Cdd:pfam14297   2 FSDDKIRRLRAEYGAKGYAIYIYLLCEIYREDGYYIEWDEDQLLLLAdKYYGVDPEDVEEIINYCVEYGLFDKELFEkYG 81


                  ....*..
gi 490456881   96 IITSAAI 102
Cdd:pfam14297  82 ILTSAGI 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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