|
Name |
Accession |
Description |
Interval |
E-value |
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
1-485 |
0e+00 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 736.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 1 MGEFKGFMKYDKQSLSELSLVDRLSNHEAFQQRFTKEDASIQGARCMDCGTPFCQTGqsygretigCPIGNYIPEWNDLV 80
Cdd:PRK12810 1 MGKPTGFLEYDRVDPKKRPVAERIKDFKEFYEPFSEEQAKIQAARCMDCGIPFCHWG---------CPVHNYIPEWNDLV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 81 YHQDFKAAYERLRETNNFPEFTGRVCPAPCEQSCVMKINRESVAIKGIERTIIDEAYENEWVHPAYPEDHKDQRVAIVGS 160
Cdd:PRK12810 72 YRGRWEEAAERLHQTNNFPEFTGRVCPAPCEGACTLNINFGPVTIKNIERYIIDKAFEEGWVKPDPPVKRTGKKVAVVGS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 161 GPAGLTAAEELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDA 240
Cdd:PRK12810 152 GPAGLAAADQLARAGHKVTVFERADRIGGLLRYGIPDFKLEKEVIDRRIELMEAEGIEFRTNVEVGKDITAEELLAEYDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 241 IILCTGAQNARDLPLEGRMGSGIHFAMDYLTEQTQYLNGEIESLSITAKDKNVIIIGAGDTGADCVATALRENCKSIVQF 320
Cdd:PRK12810 232 VFLGTGAYKPRDLGIPGRDLDGVHFAMDFLIQNTRRVLGDETEPFISAKGKHVVVIGGGDTGMDCVGTAIRQGAKSVTQR 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 321 NKYTKQPEEITfeSNTSWPLAMPVFKMDYAHKEYeakfgqEPRAYGVQTMRYDVDElGNVKGLYTQILKETPDGMVMEDG 400
Cdd:PRK12810 312 DIMPMPPSRRN--KNNPWPYWPMKLEVSNAHEEG------VEREFNVQTKEFEGEN-GKVTGVKVVRTELGEGDFEPVEG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 401 PERFWPADLVLLSIGFVGTETTVPHAFDIHT-ERNKIVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSVDQ 479
Cdd:PRK12810 383 SEFVLPADLVLLAMGFTGPEAGLLAQFGVELdERGRVAAPDNAYQTSNPKVFAAGDMRRGQSLVVWAIAEGRQAARAIDA 462
|
....*.
gi 487747201 480 YLSKEV 485
Cdd:PRK12810 463 YLMGST 468
|
|
| GOGAT_sm_gam |
TIGR01317 |
glutamate synthases, NADH/NADPH, small subunit; This model represents one of three built for ... |
6-481 |
0e+00 |
|
glutamate synthases, NADH/NADPH, small subunit; This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Pssm-ID: 162300 [Multi-domain] Cd Length: 485 Bit Score: 586.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 6 GFMKYDKQSLSELSLVDRLSNHEAFQQRFTKEDASIQGARCMDCGTPFCQTgqsygreTIGCPIGNYIPEWNDLVYHQDF 85
Cdd:TIGR01317 4 GFLEYKRRKPTERDPRTRLKDWKEFTNPFDKESAKYQAARCMDCGTPFCHN-------DSGCPLNNLIPEFNDLVFRGRW 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 86 KAAYERLRETNNFPEFTGRVCPAPCEQSCVMKINRESVAIKGIERTIIDEAYENEWVHPAYPEDHKDQRVAIVGSGPAGL 165
Cdd:TIGR01317 77 KEALDRLHATNNFPEFTGRVCPAPCEGACTLGISEDPVGIKSIERIIIDKGFQEGWVQPRPPSKRTGKKVAVVGSGPAGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 166 TAAEELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCT 245
Cdd:TIGR01317 157 AAADQLNRAGHTVTVFEREDRCGGLLMYGIPNMKLDKAIVDRRIDLLSAEGIDFVTNTEIGVDISADELKEQFDAVVLAG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 246 GAQNARDLPLEGRMGSGIHFAMDYLTEQTQYLNGE--IESLSITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFNKY 323
Cdd:TIGR01317 237 GATKPRDLPIPGRELKGIHYAMEFLPSATKALLGKdfKDIIFIKAKGKKVVVIGGGDTGADCVGTSLRHGAASVHQFEIM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 324 TKQPEEITfeSNTSWPLAMPVFKMDYAHKEYEAKFGQEPRAYGVQTMRYDVDELGNVKGLYTQIL--KETPDG---MVME 398
Cdd:TIGR01317 317 PKPPEARA--KDNPWPEWPRVYRVDYAHEEAAAHYGRDPREYSILTKEFIGDDEGKVTALRTVRVewKKSQDGkwqFVEI 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 399 DGPERFWPADLVLLSIGFVGTETTVPHAFDI-HTERNKIVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSV 477
Cdd:TIGR01317 395 PGSEEVFEADLVLLAMGFVGPEQILLDDFGVkKTRRGNISAGYDDYSTSIPGVFAAGDCRRGQSLIVWAINEGRKAAAAV 474
|
....
gi 487747201 478 DQYL 481
Cdd:TIGR01317 475 DRYL 478
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
23-480 |
0e+00 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 549.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 23 RLSNHEAFQQRFTKEDASIQGARCMDCGTPFCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFT 102
Cdd:COG0493 1 RIKDFREVYPGLSEEEAIEQAARCLDCGDPPCQTG---------CPVGNDIPEWIRLIAEGDYEEALELIHETNPFPEVC 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 103 GRVCPAPCEQSCVMKINRESVAIKGIERTIIDEAYENEWVHPAYPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYE 182
Cdd:COG0493 72 GRVCPAPCEGACVRGIVDEPVAIGALERFIADKAFEEGWVKPPPPAPRTGKKVAVVGSGPAGLAAAYQLARAGHEVTVFE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 183 KAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCTGAQNARDLPLEGRMGSG 262
Cdd:COG0493 152 ALDKPGGLLRYGIPEFRLPKDVLDREIELIEALGVEFRTNVEVGKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKG 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 263 IHFAMDYLTEQTQYLNGEieslSITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFnkYTKQPEEitfesntswplaM 342
Cdd:COG0493 232 VHSAMDFLTAVNLGEAPD----TILAVGKRVVVIGGGNTAMDCARTALRLGAESVTIV--YRRTREE------------M 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 343 P--VFKMDYAHKEyeakfGQEpRAYGVQTMRYDVDELGNVKGL---YTQILKETPDG---MVMEDGPERFWPADLVLLSI 414
Cdd:COG0493 294 PasKEEVEEALEE-----GVE-FLFLVAPVEIIGDENGRVTGLecvRMELGEPDESGrrrPVPIEGSEFTLPADLVILAI 367
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 487747201 415 GFVGTETTVPHAFDI-HTERNKIVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSVDQY 480
Cdd:COG0493 368 GQTPDPSGLEEELGLeLDKRGTIVVDEETYQTSLPGVFAGGDAVRGPSLVVWAIAEGRKAARAIDRY 434
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
5-483 |
7.78e-130 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 384.15 E-value: 7.78e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 5 KGFMKYDKQSLSELSLVDRLSNHEAFQQRFTKEDASIQGARCMDCGTPFCQTGqsygretigCPIGNYIPEWNDLVYHQD 84
Cdd:PRK11749 1 LKFLTTPRIPMPRQDAEERAQNFDEVAPGYTPEEAIEEASRCLQCKDAPCVKA---------CPVSIDIPEFIRLIAEGN 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 85 FKAAYERLRETNNFPEFTGRVCPAP--CEQSCVMKINRESVAIKGIERTIIDEAYENEWVHPAYPEDhKDQRVAIVGSGP 162
Cdd:PRK11749 72 LKGAAETILETNPLPAVCGRVCPQErlCEGACVRGKKGEPVAIGRLERYITDWAMETGWVLFKRAPK-TGKKVAVIGAGP 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 163 AGLTAAEELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAII 242
Cdd:PRK11749 151 AGLTAAHRLARKGYDVTIFEARDKAGGLLRYGIPEFRLPKDIVDREVERLLKLGVEIRTNTEVGRDITLDELRAGYDAVF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 243 LCTGAQNARDLPLEGRMGSGIHFAMDYLTEQTQylngeIESLSITAKDKNVIIIGAGDTGADCVATALRENCKS--IVqf 320
Cdd:PRK11749 231 IGTGAGLPRFLGIPGENLGGVYSAVDFLTRVNQ-----AVADYDLPVGKRVVVIGGGNTAMDAARTAKRLGAESvtIV-- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 321 nkYTKQPEEitfesntswplaMP--VFKMDYAHKEyeakfgqeprayGV------QTMRYDVDELGN--VKGLYTQILKE 390
Cdd:PRK11749 304 --YRRGREE------------MPasEEEVEHAKEE------------GVefewlaAPVEILGDEGRVtgVEFVRMELGEP 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 391 TPDG--MVMEDGPERFWPADLVLLSIGFvgtETTVPHAFDIH----TERNKIVANDTNYQTNHAKIFAAGDARRGQSLVV 464
Cdd:PRK11749 358 DASGrrRVPIEGSEFTLPADLVIKAIGQ---TPNPLILSTTPglelNRWGTIIADDETGRTSLPGVFAGGDIVTGAATVV 434
|
490
....*....|....*....
gi 487747201 465 WAIKEGREVAHSVDQYLSK 483
Cdd:PRK11749 435 WAVGDGKDAAEAIHEYLEG 453
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
51-484 |
1.22e-79 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 258.27 E-value: 1.22e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 51 TPFCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGRVCPAPCEQSCvmkiNR----ESVAIK 126
Cdd:PRK12771 46 TPPCNAA---------CPAGEDIRGWLALVRGGDYEYAWRRLTKDNPFPAVMGRVCYHPCESGC----NRgqvdDAVGIN 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 127 GIERTIIDEAYENEWVHPAyPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIR 206
Cdd:PRK12771 113 AVERFLGDYAIANGWKFPA-PAPDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLD 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 207 RRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCTGAQNARDLPLEGRMGSGIHFAMDYLteqTQYLNGEIESLsi 286
Cdd:PRK12771 192 AEIQRILDLGVEVRLGVRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFL---RAVGEGEPPFL-- 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 287 takDKNVIIIGAGDTGADCVATALRENCK--SIVqfnkYTKQPEEitfesntswplaMPvfkmdyAHKEyEAkfgQEPRA 364
Cdd:PRK12771 267 ---GKRVVVIGGGNTAMDAARTARRLGAEevTIV----YRRTRED------------MP------AHDE-EI---EEALR 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 365 YGVQTM------RYDVDELGNVKGLYTQILKETPDG---MVMEDGPERFWPADLVLLSIGfVGTETTVPHAFD-IHTERN 434
Cdd:PRK12771 318 EGVEINwlrtpvEIEGDENGATGLRVITVEKMELDEdgrPSPVTGEEETLEADLVVLAIG-QDIDSAGLESVPgVEVGRG 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 487747201 435 KIVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSVDQYLSKE 484
Cdd:PRK12771 397 VVQVDPNFMMTGRPGVFAGGDMVPGPRTVTTAIGHGKKAARNIDAFLGGE 446
|
|
| PRK12769 |
PRK12769 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
18-484 |
9.39e-75 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183733 [Multi-domain] Cd Length: 654 Bit Score: 247.74 E-value: 9.39e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 18 LSLVDRLSNHEAFQQRFTKEDASIQGARCMDCGT-PFCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETN 96
Cdd:PRK12769 199 LAIEARKTGFDEIYLPFRADQAQREASRCLKCGEhSICEWT---------CPLHNHIPQWIELVKAGNIDAAVELSHQTN 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 97 NFPEFTGRVCPAP--CEQSCVMKINRESVAIKGIERTIIDEAYENEW------VHPAypedhkDQRVAIVGSGPAGLTAA 168
Cdd:PRK12769 270 SLPEITGRVCPQDrlCEGACTLRDEYGAVTIGNIERYISDQALAKGWrpdlsqVTKS------DKRVAIIGAGPAGLACA 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 169 EELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCTGAQ 248
Cdd:PRK12769 344 DVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDISLESLLEDYDAVFVGVGTY 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 249 NARDLPLEGRMGSGIHFAMDYLTEQTQYLNGEIESLS---ITAKDKNVIIIGAGDTGADCVATALRENCKSIVqfNKYTK 325
Cdd:PRK12769 424 RSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEepfINTAGLNVVVLGGGDTAMDCVRTALRHGASNVT--CAYRR 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 326 QpeeitfESNtswplaMPVFKMDYAH-KEYEAKFgqeprAYGVQTMRYDVDELGNVKG---LYTQiLKEtPDGM-----V 396
Cdd:PRK12769 502 D------EAN------MPGSKKEVKNaREEGANF-----EFNVQPVALELNEQGHVCGirfLRTR-LGE-PDAQgrrrpV 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 397 MEDGPERFWPADLVLLSIGFVGTETTVPHAFDIHTER-NKIVANDTN---YQTNHAKIFAAGDARRGQSLVVWAIKEGRE 472
Cdd:PRK12769 563 PIPGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKwGRIIADVESqyrYQTSNPKIFAGGDAVRGADLVVTAMAEGRH 642
|
490
....*....|..
gi 487747201 473 VAHSVDQYLSKE 484
Cdd:PRK12769 643 AAQGIIDWLGVK 654
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
34-484 |
2.75e-74 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 241.46 E-value: 2.75e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 34 FTKEDASIQGARCMDCGTPFCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGRVCP--APCE 111
Cdd:PRK12831 30 YNEEEAVKEASRCLQCKKPKCVKG---------CPVSINIPGFISKLKEGDFEEAAKIIAKYNALPAVCGRVCPqeSQCE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 112 QSCVMKINRESVAIKGIERTIIDEAYENEwVHPAYPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLL 191
Cdd:PRK12831 101 GKCVLGIKGEPVAIGKLERFVADWARENG-IDLSETEEKKGKKVAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGVL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 192 MYGIPNMKLDKD-VIRRRVSLMKDAGVLFKTGVEIGVDVSRETL--EENYDAIILCTGAQNARDLPLEGRMGSGIHFAMD 268
Cdd:PRK12831 180 VYGIPEFRLPKEtVVKKEIENIKKLGVKIETNVVVGKTVTIDELleEEGFDAVFIGSGAGLPKFMGIPGENLNGVFSANE 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 269 YLTEQTQYLNGEIESLSITAKDKNVIIIGAGDTGADCVATALRENCKSIVQfnkYTKQPEEitfesntswplaMPVFKMD 348
Cdd:PRK12831 260 FLTRVNLMKAYKPEYDTPIKVGKKVAVVGGGNVAMDAARTALRLGAEVHIV---YRRSEEE------------LPARVEE 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 349 YAHKEYEA-KFgqeprAYGVQTMRYDVDELGNVKGLYTQILK-ETPDG-----MVMEDGPERFWPADLVLLSIGF----V 417
Cdd:PRK12831 325 VHHAKEEGvIF-----DLLTNPVEILGDENGWVKGMKCIKMElGEPDAsgrrrPVEIEGSEFVLEVDTVIMSLGTspnpL 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 487747201 418 GTETTvpHAFDIHtERNKIVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSVDQYLSKE 484
Cdd:PRK12831 400 ISSTT--KGLKIN-KRGCIVADEETGLTSKEGVFAGGDAVTGAATVILAMGAGKKAAKAIDEYLSKK 463
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
25-484 |
3.92e-67 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 229.24 E-value: 3.92e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 25 SNHEAFQQRFTKEDASIQGARCMDCGTPFCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGR 104
Cdd:PRK12778 310 NRFEEVNLGLTKEQAMTEAKRCLDCKNPGCVEG---------CPVGIDIPRFIKNIERGNFLEAAKILKETSALPAVCGR 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 105 VCP--APCEQSCV-MKINRESVAIKGIERTIIDeaYENEWVHPAYPE--DHKDQRVAIVGSGPAGLTAAEELNFKGYKVT 179
Cdd:PRK12778 381 VCPqeKQCESKCIhGKMGEEAVAIGYLERFVAD--YERESGNISVPEvaEKNGKKVAVIGSGPAGLSFAGDLAKRGYDVT 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 180 VYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETL-EENYDAIILCTGAQNARDLPLEGR 258
Cdd:PRK12778 459 VFEALHEIGGVLKYGIPEFRLPKKIVDVEIENLKKLGVKFETDVIVGKTITIEELeEEGFKGIFIASGAGLPNFMNIPGE 538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 259 MGSGIHFAMDYLTEQTQYLNGEIESLSITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFnkYTKQPEEitfesntsw 338
Cdd:PRK12778 539 NSNGVMSSNEYLTRVNLMDAASPDSDTPIKFGKKVAVVGGGNTAMDSARTAKRLGAERVTIV--YRRSEEE--------- 607
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 339 plaMPVFKMDYAHKEYEakfgqeprayGVQTM------RYDVDELGNVKGLYTQILK-ETPDGM-----VMEDGPERFWP 406
Cdd:PRK12778 608 ---MPARLEEVKHAKEE----------GIEFLtlhnpiEYLADEKGWVKQVVLQKMElGEPDASgrrrpVAIPGSTFTVD 674
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 487747201 407 ADLVLLSIGfVGTETTVPHAF-DIHTERNKIVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSVDQYLSKE 484
Cdd:PRK12778 675 VDLVIVSVG-VSPNPLVPSSIpGLELNRKGTIVVDEEMQSSIPGIYAGGDIVRGGATVILAMGDGKRAAAAIDEYLSSK 752
|
|
| gltA |
TIGR01316 |
glutamate synthase (NADPH), homotetrameric; This protein is homologous to the small subunit of ... |
22-481 |
3.16e-66 |
|
glutamate synthase (NADPH), homotetrameric; This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH. [Amino acid biosynthesis, Glutamate family]
Pssm-ID: 130383 [Multi-domain] Cd Length: 449 Bit Score: 220.13 E-value: 3.16e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 22 DRLSNHEAFQQRFTKEDASIQGARCMDCGtpfcqtgQSYGRETIGCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEF 101
Cdd:TIGR01316 4 ERSKLFQEAALGYTEQLALVEAQRCLNCK-------DATKPCIKGCPVHVPIPEFIAKIQEGDFKGAVDIIKTTSLLPAI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 102 TGRVCPAP--CEQSCVMKINRES----VAIKGIERTIIDEAYENEWVHPAYPEDHKDQRVAIVGSGPAGLTAAEELNFKG 175
Cdd:TIGR01316 77 CGRVCPQErqCEGQCTVGKMFKDvgkpVSIGALERFVADWERQHGIETEPEKAPSTHKKVAVIGAGPAGLACASELAKAG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 176 YKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCTGAQNARDLPL 255
Cdd:TIGR01316 157 HSVTVFEALHKPGGVVTYGIPEFRLPKEIVVTEIKTLKKLGVTFRMNFLVGKTATLEELFSQYDAVFIGTGAGLPKLMNI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 256 EGRMGSGIHFAMDYLTEQTQYLNGEI-ESLSITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFNK----YTKQPEEI 330
Cdd:TIGR01316 237 PGEELCGVYSANDFLTRANLMKAYEFpHADTPVYAGKSVVVIGGGNTAVDSARTALRLGAEVHCLYRRtredMTARVEEI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 331 tfesntswplampvfkmdyAHKEYEA-KFgqeprAYGVQTMRYDVDELGNVKGLytqILKETPDGMVMEDGPERFWP--- 406
Cdd:TIGR01316 317 -------------------AHAEEEGvKF-----HFLCQPVEIIGDEEGNVRAV---KFRKMDCQEQIDSGERRFLPcgd 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 407 ------ADLVLLSIGF----VGTETTVPHAfdihTERNKIVANDtNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHS 476
Cdd:TIGR01316 370 aeckleADAVIVAIGNgsnpIMAETTRLKT----SERGTIVVDE-DQRTSIPGVFAGGDIILGAATVIRAMGQGKRAAKS 444
|
....*
gi 487747201 477 VDQYL 481
Cdd:TIGR01316 445 INEYL 449
|
|
| PRK12809 |
PRK12809 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
37-474 |
2.03e-59 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183762 [Multi-domain] Cd Length: 639 Bit Score: 206.42 E-value: 2.03e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 37 EDASIQGARCMDCG-TPFCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGRVCPAP--CEQS 113
Cdd:PRK12809 201 QQATYESDRCVYCAeKANCNWH---------CPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPEICGRVCPQDrlCEGA 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 114 CVMKINRESVAIKGIERTIIDEAYENEWVHPAYPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLMY 193
Cdd:PRK12809 272 CTLKDHSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTF 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 194 GIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCTGAQNARDLPLEGRMGSGIHFAMDYLTEQ 273
Cdd:PRK12809 352 GIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAH 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 274 TQYLNG--EIESLSITA-KDKNVIIIGAGDTGADCVATALRENCKSIVqfNKYTKQpeeitfesntswPLAMPVFKMDYA 350
Cdd:PRK12809 432 TRQLMGlpESEEYPLTDvEGKRVVVLGGGDTTMDCLRTSIRLNAASVT--CAYRRD------------EVSMPGSRKEVV 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 351 HKEYEAKFGQepraYGVQTMRYDVDELGNVKG---LYTQILKETPDGMVMED---GPERFWPADLVLLSIGFVGTETTVP 424
Cdd:PRK12809 498 NAREEGVEFQ----FNVQPQYIACDEDGRLTAvglIRTAMGEPGPDGRRRPRpvaGSEFELPADVLIMAFGFQAHAMPWL 573
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 487747201 425 HAFDIHTER-NKIVANDTNY---QTNHAKIFAAGDARRGQSLVVWAIKEGREVA 474
Cdd:PRK12809 574 QGSGIKLDKwGLIQTGDVGYlptQTHLKKVFAGGDAVHGADLVVTAMAAGRQAA 627
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
34-484 |
1.10e-54 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 193.06 E-value: 1.10e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 34 FTKEDASIQGARCMDCGtpFCqtgqsygreTIGCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGRVCPAPCEQS 113
Cdd:PRK13984 175 YSKEQAMQEAARCVECG--IC---------TDTCPAHMDIPQYIKAIYKDDLEEGLRWLYKTNPLSMVCGRVCTHKCETV 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 114 CVMKINRESVAIKGIERTIIDEAYENEWVHPA-YPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLM 192
Cdd:PRK13984 244 CSIGHRGEPIAIRWLKRYIVDNVPVEKYSEILdDEPEKKNKKVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGGVMR 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 193 YGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCTGAQNARDLPLEGRMGSGIHFAMDYLTE 272
Cdd:PRK13984 324 YGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGKDIPLEELREKHDAVFLSTGFTLGRSTRIPGTDHPDVIQALPLLRE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 273 QTQYLNGEIESLSITakdKNVIIIGAGDTGADCVATALRencksiVQFNKYTK-----QPEEITFESntswplaMPVfKM 347
Cdd:PRK13984 404 IRDYLRGEGPKPKIP---RSLVVIGGGNVAMDIARSMAR------LQKMEYGEvnvkvTSLERTFEE-------MPA-DM 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 348 DYAHKEYEAKFGQEPrAYGVQTMrydVDELGNVKGLYTQILKETPDgmvmEDG---------PERFWPADLVLLSIGFVG 418
Cdd:PRK13984 467 EEIEEGLEEGVVIYP-GWGPMEV---VIENDKVKGVKFKKCVEVFD----EEGrfnpkfdesDQIIVEADMVVEAIGQAP 538
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 487747201 419 TETTVPHAF--DIHTERNKIVANDTNyQTNHAKIFAAGDARRGQSlVVWAIKEGREVAHSVDQYLSKE 484
Cdd:PRK13984 539 DYSYLPEELksKLEFVRGRILTNEYG-QTSIPWLFAGGDIVHGPD-IIHGVADGYWAAEGIDMYLRKQ 604
|
|
| PRK12775 |
PRK12775 |
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ... |
15-482 |
2.14e-51 |
|
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Pssm-ID: 183738 [Multi-domain] Cd Length: 1006 Bit Score: 187.84 E-value: 2.14e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 15 LSELSLVDRLSNHEAFQQRFTKEDASIQGARCMDCGTPFCqtgqsygreTIGCPIGNYIPEWNDLVYHQDFKAAYERLRE 94
Cdd:PRK12775 302 MPERDAVERARNFKEVNLGYSLEDALQEAERCIQCAKPTC---------IAGCPVQIDIPVFIRHVVVRDFDGALEVIYE 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 95 TNNFPEFTGRVCP--APCEQSCVMKINRESVAIKGIERTIIDEAYENEWVHPAYpeDHKDQRVAIVGSGPAGLTAAEELN 172
Cdd:PRK12775 373 ASIFPSICGRVCPqeTQCEAQCIIAKKHESVGIGRLERFVGDNARAKPVKPPRF--SKKLGKVAICGSGPAGLAAAADLV 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 173 FKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSRETL--EENYDAIILCTGAQNA 250
Cdd:PRK12775 451 KYGVDVTVYEALHVVGGVLQYGIPSFRLPRDIIDREVQRLVDIGVKIETNKVIGKTFTVPQLmnDKGFDAVFLGVGAGAP 530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 251 RDLPLEGRMGSGIHFAMDYLTeQTQYLNGEIESLSIT--AKDKNVIIIGAGDTGADCVATALRENCKSI--VQFNKYTKQ 326
Cdd:PRK12775 531 TFLGIPGEFAGQVYSANEFLT-RVNLMGGDKFPFLDTpiSLGKSVVVIGAGNTAMDCLRVAKRLGAPTVrcVYRRSEAEA 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 327 PEEITfesntswplampvfKMDYAHKE-YEAKFGQEPraygVQTMrydVDELGNVKGLYTQILK-ETPDgmvmEDGPERF 404
Cdd:PRK12775 610 PARIE--------------EIRHAKEEgIDFFFLHSP----VEIY---VDAEGSVRGMKVEEMElGEPD----EKGRRKP 664
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 405 WP--------ADLVLLSIGF----VGTETTVPHAFDihtERNKIVANDTNYQ----TNHAKIFAAGDARRGQSLVVWAIK 468
Cdd:PRK12775 665 MPtgefkdleCDTVIYALGTkanpIITQSTPGLALN---KWGNIAADDGKLEstqsTNLPGVFAGGDIVTGGATVILAMG 741
|
490
....*....|....
gi 487747201 469 EGREVAHSVDQYLS 482
Cdd:PRK12775 742 AGRRAARSIATYLR 755
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
46-484 |
1.68e-49 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 179.54 E-value: 1.68e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 46 CMDCGTPfCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGRVCPAPCEQSCVMKINRESVAI 125
Cdd:PRK12814 97 CGDCLGP-CELA---------CPAGCNIPGFIAAIARGDDREAIRIIKETIPLPGILGRICPAPCEEACRRHGVDEPVSI 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 126 KGIERTIIDEAYE--NEWVHPAYPEDHKdqRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKD 203
Cdd:PRK12814 167 CALKRYAADRDMEsaERYIPERAPKSGK--KVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPES 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 204 VIRRRVSLMKDAGVLFKTGVEIGVDVSRETLEENYDAIILCTGAQNARDLPLEGRMGSGIHFAMDYLTeqtqylngEIES 283
Cdd:PRK12814 245 VIDADIAPLRAMGAEFRFNTVFGRDITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFLR--------NVAL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 284 LSITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFNKYTKQP--------EEITFESNTSWPLAMPVF--KMDYAHKE 353
Cdd:PRK12814 317 GTALHPGKKVVVIGGGNTAIDAARTALRLGAESVTILYRRTREEmpanraeiEEALAEGVSLRELAAPVSieRSEGGLEL 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 354 YEAKFGQ-EPraygvqtmrydvDELGNVKglytqilketPdgmVMEDGPERFWPADLVLLSIGfVGTETTVPHAFDIHTE 432
Cdd:PRK12814 397 TAIKMQQgEP------------DESGRRR----------P---VPVEGSEFTLQADTVISAIG-QQVDPPIAEAAGIGTS 450
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 487747201 433 RN-KIVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSVDQYLSKE 484
Cdd:PRK12814 451 RNgTVKVDPETLQTSVAGVFAGGDCVTGADIAINAVEQGKRAAHAIDLFLNGK 503
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
154-484 |
1.25e-42 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 154.76 E-value: 1.25e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVD----- 228
Cdd:PRK12770 20 KVAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFGIPEFRIPIERVREGVKELEEAGVVFHTRTKVCCGeplhe 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 229 ----------VSRETLEENYDAIILCTGAQNARDLPLEGRMGSGIHFAMDYLTE----QTQYLNGEIESLSitaKDKNVI 294
Cdd:PRK12770 100 eegdefveriVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYLFRiraaKLGYLPWEKVPPV---EGKKVV 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 295 IIGAGDTGADCVATALRENCKSIVQFNKYTKQ--PEEItFESNT-------SWPLAMPVfkmdyahkeyeAKFGQEpray 365
Cdd:PRK12770 177 VVGAGLTAVDAALEAVLLGAEKVYLAYRRTINeaPAGK-YEIERliargveFLELVTPV-----------RIIGEG---- 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 366 GVQTMRYDVDELGNVKGLYTQILKETPdgmvmedGPERFWPADLVLLSIGFVGTETTVPHAFDIHTERNKIVANDTNYQT 445
Cdd:PRK12770 241 RVEGVELAKMRLGEPDESGRPRPVPIP-------GSEFVLEADTVVFAIGEIPTPPFAKECLGIELNRKGEIVVDEKHMT 313
|
330 340 350
....*....|....*....|....*....|....*....
gi 487747201 446 NHAKIFAAGDARRGQSLVVWAIKEGREVAHSVDQYLSKE 484
Cdd:PRK12770 314 SREGVFAAGDVVTGPSKIGKAIKSGLRAAQSIHEWLDLK 352
|
|
| Fer4_20 |
pfam14691 |
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; Domain II of the enzyme ... |
34-141 |
2.41e-29 |
|
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; Domain II of the enzyme dihydroprymidine dehydrogenase binds FAD. Dihydroprymidine dehydrogenase catalyzes the first and rate-limiting step of pyrimidine degradation by converting pyrimidines to the corresponding 5,6- dihydro compounds. This domain carries two Fe4-S4 clusters.
Pssm-ID: 434132 [Multi-domain] Cd Length: 113 Bit Score: 111.09 E-value: 2.41e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 34 FTKEDASIQGARCMDCGTPFCQTGqsygretigCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGRVCPA--PCE 111
Cdd:pfam14691 12 YTEEEAIAEASRCLQCKDPPCVKG---------CPVHIDIPEFIKLIAEGNFEGAARIILETNPLPAICGRVCPQerQCE 82
|
90 100 110
....*....|....*....|....*....|.
gi 487747201 112 QSCVM-KINRESVAIKGIERTIIDEAYENEW 141
Cdd:pfam14691 83 GACVLgKKGFEPVAIGRLERFAADWARENGI 113
|
|
| PRK12779 |
PRK12779 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ... |
66-477 |
9.43e-29 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Pssm-ID: 183740 [Multi-domain] Cd Length: 944 Bit Score: 120.32 E-value: 9.43e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 66 GCPIGNYIPEWNDLVYHQDFKAAYERLRETNNFPEFTGRVCPAP--CEQSCVMkiNRESVAIKGIE----------RTII 133
Cdd:PRK12779 213 GCPVKIHIPEMLDLLGNGKHREALELIESCNPLPNVTGRVCPQElqCQGVCTH--TKRPIEIGQLEwylpqheklvNPNA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 134 DEAYE---NEWVHPAYPEdhkdqrVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLMYGIPNMKLDKDVIRRRVS 210
Cdd:PRK12779 291 NERFAgriSPWAAAVKPP------IAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 211 LMKDAGVLFKTGVEIGVDVSRETLE-ENYDAIILCTGAQNARDLPLEGRMGSGIHFAMDYLTEQT--QYLNGEIESLSIT 287
Cdd:PRK12779 365 KIKLLGGRFVKNFVVGKTATLEDLKaAGFWKIFVGTGAGLPTFMNVPGEHLLGVMSANEFLTRVNlmRGLDDDYETPLPE 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 288 AKDKNVIIIGAGDTGADCVATALRENCKSIVQFNKYTKQpeeitfesntswplaMPVfKMDYAHKEYE-----------A 356
Cdd:PRK12779 445 VKGKEVFVIGGGNTAMDAARTAKRLGGNVTIVYRRTKSE---------------MPA-RVEELHHALEeginlavlrapR 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 357 KFGQEPRAYGVQTMRYDVDELGNVKGlyTQILKETPDGMVmedgpERFwPADLVLLSIGfvgtETTVPHAFDIHT--ERN 434
Cdd:PRK12779 509 EFIGDDHTHFVTHALLDVNELGEPDK--SGRRSPKPTGEI-----ERV-PVDLVIMALG----NTANPIMKDAEPglKTN 576
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 487747201 435 K---IVANDTNYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAHSV 477
Cdd:PRK12779 577 KwgtIEVEKGSQRTSIKGVYSGGDAARGGSTAIRAAGDGQAAAKEI 622
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
154-470 |
5.28e-21 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 93.15 E-value: 5.28e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKA-HEPGG--LLMYGIPNMKLDKDVIRRRVSLMKD-AGVLFKTGVEI---- 225
Cdd:pfam07992 2 DVVVIGGGPAGLAAALTLAQLGGKVTLIEDEgTCPYGgcVLSKALLGAAEAPEIASLWADLYKRkEEVVKKLNNGIevll 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 226 -----GVDVSRETLEEN-----------YDAIILCTGAQnARDLPLEGrMGSGIHFAMDYLtEQTQYLNgeieslsITAK 289
Cdd:pfam07992 82 gtevvSIDPGAKKVVLEelvdgdgetitYDRLVIATGAR-PRLPPIPG-VELNVGFLVRTL-DSAEALR-------LKLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 290 DKNVIIIGAGDTGADCVATALRENCK-SIVQFNkytkqpeeitfesntswPLAMPVFKMDYAhKEYEAKFgqepRAYGVQ 368
Cdd:pfam07992 152 PKRVVVVGGGYIGVELAAALAKLGKEvTLIEAL-----------------DRLLRAFDEEIS-AALEKAL----EKNGVE 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 369 TMrydvdeLGNVkglYTQILKETPDGMVMEDGPERFwPADLVLLSIGFVGTETTVPHAFDIHTERNKIVANDtNYQTNHA 448
Cdd:pfam07992 210 VR------LGTS---VKEIIGDGDGVEVILKDGTEI-DADLVVVAIGRRPNTELLEAAGLELDERGGIVVDE-YLRTSVP 278
|
330 340
....*....|....*....|...
gi 487747201 449 KIFAAGDARRGQ-SLVVWAIKEG 470
Cdd:pfam07992 279 GIYAAGDCRVGGpELAQNAVAQG 301
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
155-483 |
5.57e-21 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 93.26 E-value: 5.57e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 155 VAIVGSGPAGLTAAEELNFKGYKVTVYEKaHEPGGLLM--------YGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEIG 226
Cdd:COG0492 3 VVIIGAGPAGLTAAIYAARAGLKTLVIEG-GEPGGQLAttkeienyPGFPEGISGPELAERLREQAERFGAEILLEEVTS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 227 VDVSRETLE------ENY--DAIILCTGAQnARDLPLEG---RMGSGIHFAmdyLTEQTQYLngeieslsitaKDKNVII 295
Cdd:COG0492 82 VDKDDGPFRvttddgTEYeaKAVIIATGAG-PRKLGLPGeeeFEGRGVSYC---ATCDGFFF-----------RGKDVVV 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 296 IGAGDTGADcVATALRENCKSIVQFNKYTKqpeeitfesntswplampvFKmdyAHKEYEAKFGQEPrayGVQTM-RYDV 374
Cdd:COG0492 147 VGGGDSALE-EALYLTKFASKVTLIHRRDE-------------------LR---ASKILVERLRANP---KIEVLwNTEV 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 375 DEL---GNVKGLytqILKETpdgmvmEDGPERFWPADLVLLSIGFVGTETTVPHAFDIHTERNKIVANDTnYQTNHAKIF 451
Cdd:COG0492 201 TEIegdGRVEGV---TLKNV------KTGEEKELEVDGVFVAIGLKPNTELLKGLGLELDEDGYIVVDED-METSVPGVF 270
|
330 340 350
....*....|....*....|....*....|...
gi 487747201 452 AAGDARRGQS-LVVWAIKEGREVAHSVDQYLSK 483
Cdd:COG0492 271 AAGDVRDYKYrQAATAAGEGAIAALSAARYLEP 303
|
|
| PLN02852 |
PLN02852 |
ferredoxin-NADP+ reductase |
154-311 |
1.70e-18 |
|
ferredoxin-NADP+ reductase
Pssm-ID: 215457 Cd Length: 491 Bit Score: 87.83 E-value: 1.70e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEEL--NFKGYKVTVYEKAHEPGGLLMYGI-PNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVS 230
Cdd:PLN02852 28 HVCVVGSGPAGFYTADKLlkAHDGARVDIIERLPTPFGLVRSGVaPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRDVS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 231 RETLEENYDAIILCTGAQNARDLPLEGRMGSGIHFAmdylTEQTQYLNG--EIESLSITAK-DKNVIIIGAGDTGADCVA 307
Cdd:PLN02852 108 LSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSA----REFVWWYNGhpDCVHLPPDLKsSDTAVVLGQGNVALDCAR 183
|
....
gi 487747201 308 TALR 311
Cdd:PLN02852 184 ILLR 187
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
170-475 |
8.14e-14 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 72.15 E-value: 8.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 170 ELNFKGyKVTVYEKAHE-----PGGLLMYGIPNMKLDkDVIRRRVSLMKDAGVLFKTGVE-IGVDVSRETL------EEN 237
Cdd:COG0446 1 RLGPDA-EITVIEKGPHhsyqpCGLPYYVGGGIKDPE-DLLVRTPESFERKGIDVRTGTEvTAIDPEAKTVtlrdgeTLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 238 YDAIILCTGAQnARDLPLEGRMGSGIHFAMDYltEQTQYLNGEIESLSItakdKNVIIIGAGDTGADcVATALRENCKSI 317
Cdd:COG0446 79 YDKLVLATGAR-PRPPPIPGLDLPGVFTLRTL--DDADALREALKEFKG----KRAVVIGGGPIGLE-LAEALRKRGLKV 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 318 vqfnkytkqpeEITFESntswPLAMPVFKMDYAhkeyeAKFGQEPRAYGVqTMRYDVdelgNVKGlytqILKETPDGMVM 397
Cdd:COG0446 151 -----------TLVERA----PRLLGVLDPEMA-----ALLEEELREHGV-ELRLGE----TVVA----IDGDDKVAVTL 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 398 EDGPERfwPADLVLLSIGfVGTETTVPHAFDI-HTERNKIVANDTnYQTNHAKIFAAGDARR------GQSLVVW----A 466
Cdd:COG0446 202 TDGEEI--PADLVVVAPG-VRPNTELAKDAGLaLGERGWIKVDET-LQTSDPDVYAAGDCAEvphpvtGKTVYIPlasaA 277
|
....*....
gi 487747201 467 IKEGREVAH 475
Cdd:COG0446 278 NKQGRVAAE 286
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
153-455 |
1.60e-12 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 69.01 E-value: 1.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 153 QRVAIVGSGPAGLTAAEEL--NFKGYKVTVYEKahEPGG-----LLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVEI 225
Cdd:COG1251 2 MRIVIIGAGMAGVRAAEELrkLDPDGEITVIGA--EPHPpynrpPLSKVLAGETDEEDLLLRPADFYEENGIDLRLGTRV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 226 -GVDVSRETL------EENYDAIILCTGAQNARdLPLEGRMGSGIHFamdYLT-EQTQYLNGEIeslsitAKDKNVIIIG 297
Cdd:COG1251 80 tAIDRAARTVtladgeTLPYDKLVLATGSRPRV-PPIPGADLPGVFT---LRTlDDADALRAAL------APGKRVVVIG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 298 AGDTGADcVATALRENCK--SIVQFNkytkqpeeitfesntSWPLA--MPVFKMDYAHKEYEAKfGQEPRaYGVQTMRYD 373
Cdd:COG1251 150 GGLIGLE-AAAALRKRGLevTVVERA---------------PRLLPrqLDEEAGALLQRLLEAL-GVEVR-LGTGVTEIE 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 374 VDelGNVKGLytqilkETPDGmvmedgpeRFWPADLVLLSIGfVGTETTVPHAFDIHTERNkIVANDTnYQTNHAKIFAA 453
Cdd:COG1251 212 GD--DRVTGV------RLADG--------EELPADLVVVAIG-VRPNTELARAAGLAVDRG-IVVDDY-LRTSDPDIYAA 272
|
..
gi 487747201 454 GD 455
Cdd:COG1251 273 GD 274
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
154-475 |
6.58e-11 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 64.00 E-value: 6.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEEL---NFKGYKVTVYEKA--HEPGGLLmYGIP--NMKLDKDVIRRRvSLMKDAGVLFKTGVEIG 226
Cdd:COG1252 3 RIVIVGGGFAGLEAARRLrkkLGGDAEVTLIDPNpyHLFQPLL-PEVAagTLSPDDIAIPLR-ELLRRAGVRFIQGEVTG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 227 VDVSRETL------EENYDAIILCTGAQNArDLPLEGrMGSGIHFAmdYLTEQTQYLNGEIESLSITAKDK---NVIIIG 297
Cdd:COG1252 81 IDPEARTVtladgrTLSYDYLVIATGSVTN-FFGIPG-LAEHALPL--KTLEDALALRERLLAAFERAERRrllTIVVVG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 298 AGDTGADcVATALRENCKSIVQFNKYTKQPEEITF-ESNtswPLAMPVF--KM-DYAHKEYEAKfgqeprayGVQTMryd 373
Cdd:COG1252 157 GGPTGVE-LAGELAELLRKLLRYPGIDPDKVRITLvEAG---PRILPGLgeKLsEAAEKELEKR--------GVEVH--- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 374 vdeLGnvkglyTQILKETPDGMVMEDGpeRFWPADLVLLSIGFVGTEttVPHAFDIHT-ERNKIVANDTNYQTNHAKIFA 452
Cdd:COG1252 222 ---TG------TRVTEVDADGVTLEDG--EEIPADTVIWAAGVKAPP--LLADLGLPTdRRGRVLVDPTLQVPGHPNVFA 288
|
330 340 350
....*....|....*....|....*....|.
gi 487747201 453 AGDA-----RRGQSL---VVWAIKEGREVAH 475
Cdd:COG1252 289 IGDCaavpdPDGKPVpktAQAAVQQAKVLAK 319
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
154-202 |
1.93e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 62.60 E-value: 1.93e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLL-MYGIPNMKLDK 202
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAaSFEFGGLPIER 50
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
152-248 |
2.40e-09 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 59.49 E-value: 2.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 152 DQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLmygipnMKLDK-------------DVIRR-----RVSLMK 213
Cdd:COG1148 140 NKRALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRA------AQLHKtfpgldcpqcilePLIAEveanpNITVYT 213
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 487747201 214 DAGVL--------FKTGVEIGvdvSRETLEENYDAIILCTGAQ 248
Cdd:COG1148 214 GAEVEevsgyvgnFTVTIKKG---PREEIEIEVGAIVLATGFK 253
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
153-191 |
2.82e-09 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 59.08 E-value: 2.82e-09
10 20 30
....*....|....*....|....*....|....*....
gi 487747201 153 QRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLL 191
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLI 40
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
157-201 |
8.16e-09 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 51.76 E-value: 8.16e-09
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 487747201 157 IVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLM-YGIPNMKLD 201
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYsYRVPGYVFD 46
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
151-189 |
1.14e-08 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 57.17 E-value: 1.14e-08
10 20 30
....*....|....*....|....*....|....*....
gi 487747201 151 KDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:COG1233 2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGG 40
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
154-189 |
1.24e-08 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 56.42 E-value: 1.24e-08
10 20 30
....*....|....*....|....*....|....*.
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:COG3380 5 DIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGG 40
|
|
| PTZ00188 |
PTZ00188 |
adrenodoxin reductase; Provisional |
154-304 |
1.21e-07 |
|
adrenodoxin reductase; Provisional
Pssm-ID: 240308 Cd Length: 506 Bit Score: 54.12 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEE-LNFKGYKVTVYEKAHEPGGLLMYGI-PNMKLDKDVIRRRVSLMKDAGVLFKTGVEIGVDVSR 231
Cdd:PTZ00188 41 KVGIIGAGPSALYCCKHlLKHERVKVDIFEKLPNPYGLIRYGVaPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGVDLKM 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 232 ETLEENYDAIILCTGA--------QNARDLPLEG-----RMGSGIHFAMDYLteqtQYLNGEIESLSITAKDK------- 291
Cdd:PTZ00188 121 EELRNHYNCVIFCCGAsevsipigQQDEDKAVSGgetnpRKQNGIFHARDLI----YFYNNMYNDVRCKAVDNylnsfen 196
|
170
....*....|....*
gi 487747201 292 --NVIIIGAGDTGAD 304
Cdd:PTZ00188 197 ftTSIIIGNGNVSLD 211
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
153-190 |
1.36e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 53.74 E-value: 1.36e-07
10 20 30
....*....|....*....|....*....|....*...
gi 487747201 153 QRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGL 190
Cdd:PRK07208 5 KSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGI 42
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
155-475 |
3.87e-07 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 52.40 E-value: 3.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 155 VAIVGSGPAGLTAAEELNFKGYKVTVYEKaHEPGG------------LL-------------MYGI--PNMKLD-KDVIR 206
Cdd:COG1249 6 LVVIGAGPGGYVAAIRAAQLGLKVALVEK-GRLGGtclnvgcipskaLLhaaevahearhaaEFGIsaGAPSVDwAALMA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 207 RR-----------VSLMKDAGV-LFK-TGVEIG---VDVS-RETLEenYDAIILCTGAQnARDLPLEGRMGSGIH----- 264
Cdd:COG1249 85 RKdkvvdrlrggvEELLKKNGVdVIRgRARFVDphtVEVTgGETLT--ADHIVIATGSR-PRVPPIPGLDEVRVLtsdea 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 265 FAMDYLTeqtqylngeieslsitakdKNVIIIGAGDTGADcVATALRE-NCK-SIVQFNKY--TKQPEEITfesntswpl 340
Cdd:COG1249 162 LELEELP-------------------KSLVVIGGGYIGLE-FAQIFARlGSEvTLVERGDRllPGEDPEIS--------- 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 341 ampvfkmDYAHKEYEAKfgqeprayGVQTMrydvdelgnvkgLYTQI--LKETPDGMV--MEDG-PERFWPADLVLLSIG 415
Cdd:COG1249 213 -------EALEKALEKE--------GIDIL------------TGAKVtsVEKTGDGVTvtLEDGgGEEAVEADKVLVATG 265
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 487747201 416 FV------GTETTvphafDIHT-ERNKIVANDTnYQTNHAKIFAAGDARRGQSLVVWAIKEGREVAH 475
Cdd:COG1249 266 RRpntdglGLEAA-----GVELdERGGIKVDEY-LRTSVPGIYAIGDVTGGPQLAHVASAEGRVAAE 326
|
|
| PRK06567 |
PRK06567 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated |
64-333 |
4.10e-07 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Pssm-ID: 235832 [Multi-domain] Cd Length: 1028 Bit Score: 52.60 E-value: 4.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 64 TIGCPIGNYIPEWNdLVYHQDFK-AAYERLRETNNFPEFTG-RVCpAPCEQSCVMKiNRESVAIKGIERTIIDEAYE--- 138
Cdd:PRK06567 281 KQGCPLKQKISEMN-YVKAQGFNlSALAIIVIDNPMVAATGhRIC-NDCSKACIYQ-KQDPVNIPLIESNILEETLKlpy 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 139 --------NEW----VHPAYPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYE---------KAHEP---------- 187
Cdd:PRK06567 358 gleiylllTRWnplnIYAPLPKEPTNYNILVTGLGPAGFSLSYYLLRSGHNVTAIDglkitllpfDVHKPikfwheyknl 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 188 ---------GGLLMYGIpNMKLDK---DVIRrrVSLMKDAGVLFKTGVEIGVDVSRE-TLEENYDAIILCTGAQNARDLP 254
Cdd:PRK06567 438 lsermprgfGGVAEYGI-TVRWDKnnlDILR--LILERNNNFKYYDGVALDFNITKEqAFDLGFDHIAFCIGAGQPKVLD 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 255 LEGRMGSGIHFAMDYL-TEQT--QYLNGEIESLSITAKdknVIIIGAGDTGADCVATALRENCKSIVQFNK------YTK 325
Cdd:PRK06567 515 IENFEAKGVKTASDFLmTLQSggAFLKNSNTNMVIRMP---IAVIGGGLTSLDAATESLYYYKKQVEEFAKdyiekdLTE 591
|
....*...
gi 487747201 326 QPEEITFE 333
Cdd:PRK06567 592 EDKEIAEE 599
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
148-256 |
5.26e-07 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 51.35 E-value: 5.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 148 EDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHepgGLLmygipnMKLDKDVIRRRVSLMKDAGVLFKTGVEI-- 225
Cdd:COG0446 120 KEFKGKRAVVIGGGPIGLELAEALRKRGLKVTLVERAP---RLL------GVLDPEMAALLEEELREHGVELRLGETVva 190
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 487747201 226 -----GVDV---SRETLEenYDAIILCTG-AQN---ARDLPLE 256
Cdd:COG0446 191 idgddKVAVtltDGEEIP--ADLVVVAPGvRPNtelAKDAGLA 231
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
153-189 |
6.88e-07 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 51.39 E-value: 6.88e-07
10 20 30
....*....|....*....|....*....|....*..
gi 487747201 153 QRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:COG3349 4 PRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGG 40
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
154-416 |
8.46e-07 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 51.02 E-value: 8.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG---------------LLMYGIPNMKL--------DKDVIR---- 206
Cdd:COG2072 8 DVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGtwrdnrypglrldtpSHLYSLPFFPNwsddpdfpTGDEILayle 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 207 ---RRVSLMKDagVLFKTGVEiGVDVSRET----------LEENYDAIILCTGA-QNARDLPLEGRMGSG---IHFAmdy 269
Cdd:COG2072 88 ayaDKFGLRRP--IRFGTEVT-SARWDEADgrwtvttddgETLTARFVVVATGPlSRPKIPDIPGLEDFAgeqLHSA--- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 270 lteqtQYLNGeiESLsitaKDKNVIIIGAGDTGADcVATALRENCKS----------IVQFNKYtkqPEEITFESNTSWP 339
Cdd:COG2072 162 -----DWRNP--VDL----AGKRVLVVGTGASAVQ-IAPELARVAAHvtvfqrtppwVLPRPNY---DPERGRPANYLGL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 340 LAMPVFKMDYAHKEYEAK-FGQEPR-AYGVQTMRYDV--------DEL------GNVKgLYTQILKE-TPDGMVMEDGPE 402
Cdd:COG2072 227 EAPPALNRRDARAWLRRLlRAQVKDpELGLLTPDYPPgckrpllsTDYyealrrGNVE-LVTGGIERiTEDGVVFADGTE 305
|
330
....*....|....
gi 487747201 403 RfwPADLVLLSIGF 416
Cdd:COG2072 306 H--EVDVIVWATGF 317
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
153-189 |
1.08e-06 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 50.88 E-value: 1.08e-06
10 20 30
....*....|....*....|....*....|....*..
gi 487747201 153 QRVAIVGSGPAGLTAAEELNfKGYKVTVYEKAHEPGG 189
Cdd:COG2907 4 MRIAVIGSGISGLTAAWLLS-RRHDVTLFEANDRLGG 39
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
154-189 |
2.44e-06 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 49.92 E-value: 2.44e-06
10 20 30
....*....|....*....|....*....|....*.
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:COG1231 9 DVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGG 44
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
154-203 |
3.87e-06 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 49.12 E-value: 3.87e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPG-GLLMYG-----IPNMKLDKD 203
Cdd:pfam03486 2 DVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGrKILISGggrcnVTNLSEEPD 57
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
153-193 |
1.98e-05 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 46.78 E-value: 1.98e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 487747201 153 QRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGLLMY 193
Cdd:PLN02172 11 QHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVY 51
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
153-231 |
2.91e-05 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 46.78 E-value: 2.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 153 QRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGllmygipnmkldkDVIRRRVSLM--KDAGVLFKTGVEIGVDVS 230
Cdd:PLN02976 694 KKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGG-------------RVYTDRSSLSvpVDLGASIITGVEADVATE 760
|
.
gi 487747201 231 R 231
Cdd:PLN02976 761 R 761
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
145-188 |
3.64e-05 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 46.38 E-value: 3.64e-05
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 487747201 145 AYPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPG 188
Cdd:PRK01747 253 ARPGSPKARDAAIIGGGIAGAALALALARRGWQVTLYEADEAPA 296
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
154-191 |
3.66e-05 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 46.00 E-value: 3.66e-05
10 20 30 40
....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKG--YKVTVYEKAHEPGGLL 191
Cdd:PRK11883 2 KVAIIGGGITGLSAAYRLHKKGpdADITLLEASDRLGGKI 41
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
154-187 |
3.75e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 45.84 E-value: 3.75e-05
10 20 30
....*....|....*....|....*....|....
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEP 187
Cdd:PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESV 35
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
151-188 |
4.08e-05 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 45.70 E-value: 4.08e-05
10 20 30
....*....|....*....|....*....|....*...
gi 487747201 151 KDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPG 188
Cdd:COG0654 2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPR 39
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
154-195 |
5.02e-05 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 45.47 E-value: 5.02e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPG--------GLLMYGI 195
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGsgasgrnaGLIHPGL 50
|
|
| COG2509 |
COG2509 |
FAD-dependent dehydrogenase [General function prediction only]; |
151-183 |
5.50e-05 |
|
FAD-dependent dehydrogenase [General function prediction only];
Pssm-ID: 441999 [Multi-domain] Cd Length: 466 Bit Score: 45.49 E-value: 5.50e-05
10 20 30
....*....|....*....|....*....|...
gi 487747201 151 KDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEK 183
Cdd:COG2509 29 LKYDVVIVGAGPAGLFAALELAEAGLKPLVLER 61
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
146-189 |
9.05e-05 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 45.01 E-value: 9.05e-05
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 487747201 146 YPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:PLN03000 178 FPAQSSKSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGG 221
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
161-233 |
1.06e-04 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 44.19 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 161 GPAGLTAAEELNFKGYKVTVYEKAHEP------GGLLMYGIPNMKL--DKDVIRRRVslmKDAGVLFKTGVEIGVDVSRE 232
Cdd:COG0644 2 GPAGSAAARRLARAGLSVLLLEKGSFPgdkicgGGLLPRALEELEPlgLDEPLERPV---RGARFYSPGGKSVELPPGRG 78
|
.
gi 487747201 233 T 233
Cdd:COG0644 79 G 79
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
155-189 |
1.54e-04 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 43.82 E-value: 1.54e-04
10 20 30
....*....|....*....|....*....|....*
gi 487747201 155 VAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
154-311 |
1.56e-04 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 44.17 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEEL---NFKGYKVTVYEKAHEPGGLLMYG---------IP--NMKLDKDV--------------- 204
Cdd:COG4529 7 RIAIIGGGASGTALAIHLlrrAPEPLRITLFEPRPELGRGVAYStdspehllnVPagRMSAFPDDpdhflrwlrengara 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 205 ---------IRRRV------SLMKDAGVLFKTGVEI------GVDVSRE------TLEEN----YDAIILCTGAQNARDL 253
Cdd:COG4529 87 apaidpdafVPRRLfgeylrERLAEALARAPAGVRLrhiraeVVDLERDdggyrvTLADGetlrADAVVLATGHPPPAPP 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 487747201 254 PLEGRmGSGIHFAMDYlteqtqylngEIESLSITAKDKNVIIIGAGDTGADCVATALR 311
Cdd:COG4529 167 PGLAA-GSPRYIADPW----------PPGALARIPPDARVLIIGTGLTAIDVVLSLAA 213
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
144-189 |
1.85e-04 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 44.11 E-value: 1.85e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 487747201 144 PAYPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:PLN02529 152 SPIPEEGTEGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGG 197
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
151-246 |
1.88e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 43.46 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 151 KDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAhepggllmyGIPNMKLDKDVIRRRVSLMKDAGVLFKTGVE----IG 226
Cdd:pfam07992 151 LPKRVVVVGGGYIGVELAAALAKLGKEVTLIEAL---------DRLLRAFDEEISAALEKALEKNGVEVRLGTSvkeiIG 221
|
90 100
....*....|....*....|....*
gi 487747201 227 VDVSRETLEEN-----YDAIILCTG 246
Cdd:pfam07992 222 DGDGVEVILKDgteidADLVVVAIG 246
|
|
| Thi4 |
pfam01946 |
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme. |
133-189 |
3.44e-04 |
|
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
Pssm-ID: 460393 Cd Length: 232 Bit Score: 42.07 E-value: 3.44e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 487747201 133 IDEAYENEWVhpaypeDHKDQRVAIVGSGPAGLTAAEELNFK-GYKVTVYEKAHEPGG 189
Cdd:pfam01946 4 MTRRYFEDLD------DYAESDVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSVSPGG 55
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
154-236 |
4.70e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 38.72 E-value: 4.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGGllmygipnmKLDKDVIRRRVSLMKDAGVLFKTG-----VEIGVD 228
Cdd:pfam00070 1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRLLP---------GFDPEIAKILQEKLEKNGIEFLLNttveaIEGNGD 71
|
....*...
gi 487747201 229 VSRETLEE 236
Cdd:pfam00070 72 GVVVVLTD 79
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
154-229 |
6.47e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 41.81 E-value: 6.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEkAHEPG--------GLLMYGipnmkLDKDVIRRRVSLMKDAGVLFKTGV-E 224
Cdd:COG0665 4 DVVVIGGGIAGLSTAYHLARRGLDVTVLE-RGRPGsgasgrnaGQLRPG-----LAALADRALVRLAREALDLWRELAaE 77
|
....*
gi 487747201 225 IGVDV 229
Cdd:COG0665 78 LGIDC 82
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
155-189 |
6.73e-04 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 42.13 E-value: 6.73e-04
10 20 30
....*....|....*....|....*....|....*
gi 487747201 155 VAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPGG 189
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
|
|
| PRK13977 |
PRK13977 |
myosin-cross-reactive antigen; Provisional |
142-189 |
7.20e-04 |
|
myosin-cross-reactive antigen; Provisional
Pssm-ID: 237575 Cd Length: 576 Bit Score: 42.12 E-value: 7.20e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 487747201 142 VHPAYPEDHKDQRVAIVGSGPAGLTAAEEL----NFKGYKVTVYEKAHEPGG 189
Cdd:PRK13977 12 ARPRKPEGVDNKKAYIIGSGLASLAAAVFLirdgQMPGENITILEELDVPGG 63
|
|
| PLN00093 |
PLN00093 |
geranylgeranyl diphosphate reductase; Provisional |
154-237 |
9.26e-04 |
|
geranylgeranyl diphosphate reductase; Provisional
Pssm-ID: 177713 [Multi-domain] Cd Length: 450 Bit Score: 41.66 E-value: 9.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 154 RVAIVGSGPAGLTAAEELNFKGYKVTVYEK----AHEPGG---LLMYGipNMKLDKDVIRRRVSLMKdagVLFKTGVEig 226
Cdd:PLN00093 41 RVAVIGGGPAGACAAETLAKGGIETFLIERkldnAKPCGGaipLCMVG--EFDLPLDIIDRKVTKMK---MISPSNVA-- 113
|
90
....*....|.
gi 487747201 227 VDVSReTLEEN 237
Cdd:PLN00093 114 VDIGK-TLKPH 123
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
140-253 |
1.31e-03 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 40.82 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 140 EWVHPAYPEDHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKahepggllmygipnmklDKDVIRRrvslMKDAGVLF 219
Cdd:COG0569 83 RRRRMERGIKKLKMHVIIIGAGRVGRSLARELEEEGHDVVVIDK-----------------DPERVER----LAEEDVLV 141
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 487747201 220 KTGveigvDVS-RETLEE----NYDAIILCTG--------AQNARDL 253
Cdd:COG0569 142 IVG-----DATdEEVLEEagieDADAVIAATGddeanilaCLLAKEL 183
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
149-256 |
2.24e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 40.50 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 149 DHKDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAhePGGLLMYGIPNMKLDKDvirrrvsLMKDAGVLFKTGVEIG-- 226
Cdd:PRK07251 154 ETLPERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAA--STILPREEPSVAALAKQ-------YMEEDGITFLLNAHTTev 224
|
90 100 110
....*....|....*....|....*....|....*..
gi 487747201 227 ------VDVSRETLEENYDAIILCTGAQ-NARDLPLE 256
Cdd:PRK07251 225 kndgdqVLVVTEDETYRFDALLYATGRKpNTEPLGLE 261
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
155-188 |
2.25e-03 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 39.99 E-value: 2.25e-03
10 20 30
....*....|....*....|....*....|....
gi 487747201 155 VAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPG 188
Cdd:TIGR02032 3 VVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPR 36
|
|
| PTZ00052 |
PTZ00052 |
thioredoxin reductase; Provisional |
157-246 |
3.22e-03 |
|
thioredoxin reductase; Provisional
Pssm-ID: 185416 [Multi-domain] Cd Length: 499 Bit Score: 39.81 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 487747201 157 IVGSGPAGLTAAEELNFKGYKVTVyekahepgglLMYGIPNMKLDKDVIRRRVSLMKDAGVLFKTGV----------EIG 226
Cdd:PTZ00052 187 IVGASYIGLETAGFLNELGFDVTV----------AVRSIPLRGFDRQCSEKVVEYMKEQGTLFLEGVvpiniekmddKIK 256
|
90 100
....*....|....*....|
gi 487747201 227 VDVSRETLEEnYDAIILCTG 246
Cdd:PTZ00052 257 VLFSDGTTEL-FDTVLYATG 275
|
|
| PRK06475 |
PRK06475 |
FAD-binding protein; |
152-186 |
3.37e-03 |
|
FAD-binding protein;
Pssm-ID: 180582 [Multi-domain] Cd Length: 400 Bit Score: 39.81 E-value: 3.37e-03
10 20 30
....*....|....*....|....*....|....*
gi 487747201 152 DQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHE 186
Cdd:PRK06475 2 RGSPLIAGAGVAGLSAALELAARGWAVTIIEKAQE 36
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
151-188 |
4.09e-03 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 39.64 E-value: 4.09e-03
10 20 30
....*....|....*....|....*....|....*...
gi 487747201 151 KDQRVAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEPG 188
Cdd:PRK08163 3 KVTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIG 40
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
153-183 |
6.79e-03 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 38.85 E-value: 6.79e-03
10 20 30
....*....|....*....|....*....|.
gi 487747201 153 QRVAIVGSGPAGLTAAEELNFKGYKVTVYEK 183
Cdd:PRK12409 2 SHIAVIGAGITGVTTAYALAQRGYQVTVFDR 32
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
155-187 |
6.87e-03 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 38.73 E-value: 6.87e-03
10 20 30
....*....|....*....|....*....|...
gi 487747201 155 VAIVGSGPAGLTAAEELNFKGYKVTVYEKAHEP 187
Cdd:PRK06183 13 VVIVGAGPVGLTLANLLGQYGVRVLVLERWPTL 45
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
144-182 |
8.29e-03 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 38.63 E-value: 8.29e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 487747201 144 PAYPEDHKDQR--VAIVGSGPAGLTAAEELNFKGYKVTVYE 182
Cdd:PLN02487 65 PPEPEAYKGPKlkVAIIGAGLAGMSTAVELLDQGHEVDIYE 105
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
155-183 |
9.79e-03 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 38.08 E-value: 9.79e-03
10 20
....*....|....*....|....*....
gi 487747201 155 VAIVGSGPAGLTAAEELNFKGYKVTVYEK 183
Cdd:pfam01494 4 VLIVGGGPAGLMLALLLARAGVRVVLVER 32
|
|
| |
