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Conserved domains on  [gi|47086707|ref|NP_997830|]
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dnaJ homolog subfamily A member 2b [Danio rerio]

Protein Classification

J domain-containing protein( domain architecture ID 1002416)

J domain-containing protein similar to the N-terminal conserved domain (called J domain) of DnaJ-like proteins, which is involved in regulating the ATPase activity of heat shock protein 70 (Hsp70) by ATP hydrolysis

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
SCOP:  4000605

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PTZ00037 super family cl36499
DnaJ_C chaperone protein; Provisional
4-413 9.90e-131

DnaJ_C chaperone protein; Provisional


The actual alignment was detected with superfamily member PTZ00037:

Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 382.63  E-value: 9.90e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    4 VADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKnpnAGD--KFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGG 81
Cdd:PTZ00037  25 VDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK---GGDpeKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPA 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 AGMeDIFSHIFggglfgfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKC 161
Cdd:PTZ00037 102 DAS-DLFDLIF-----------GGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDC 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  162 STCRGRGMRIMIRQLAPgMVQQMQSVCTDCNGEGEVIHEKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQ 241
Cdd:PTZ00037 170 KLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADE 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  242 SPNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGKVVEPGSIRVVRGEGMPQ 321
Cdd:PTZ00037 249 KPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPT 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  322 YRNPFEKGDLFIKFDVQFPENGWISTEKLSELEDLLPSRTEVPVISADT--EEVDLQDFDMSQGSSGGHRREAyndSSDE 399
Cdd:PTZ00037 329 YKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNPEEKKDLEDTeiEVVTAQNVDPEEVKDRDQKQQY---QEDE 405
                        410
                 ....*....|....*.
gi 47086707  400 EGGPHGPG--VQCAHQ 413
Cdd:PTZ00037 406 DDEHHQEGerVACRQQ 421
 
Name Accession Description Interval E-value
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
4-413 9.90e-131

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 382.63  E-value: 9.90e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    4 VADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKnpnAGD--KFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGG 81
Cdd:PTZ00037  25 VDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK---GGDpeKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPA 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 AGMeDIFSHIFggglfgfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKC 161
Cdd:PTZ00037 102 DAS-DLFDLIF-----------GGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDC 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  162 STCRGRGMRIMIRQLAPgMVQQMQSVCTDCNGEGEVIHEKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQ 241
Cdd:PTZ00037 170 KLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADE 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  242 SPNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGKVVEPGSIRVVRGEGMPQ 321
Cdd:PTZ00037 249 KPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPT 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  322 YRNPFEKGDLFIKFDVQFPENGWISTEKLSELEDLLPSRTEVPVISADT--EEVDLQDFDMSQGSSGGHRREAyndSSDE 399
Cdd:PTZ00037 329 YKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNPEEKKDLEDTeiEVVTAQNVDPEEVKDRDQKQQY---QEDE 405
                        410
                 ....*....|....*.
gi 47086707  400 EGGPHGPG--VQCAHQ 413
Cdd:PTZ00037 406 DDEHHQEGerVACRQQ 421
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
10-357 3.26e-85

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 263.69  E-value: 3.26e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN--AGDKFKEISFAYEVLTNPEKKDLYDRY------------GEQGLR 75
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDkeAEEKFKEINEAYEVLSDPEKRAQYDQFghagfnggggggGGGFNG 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    76 EGGGGGAGMEDIFSHIFGGGLFgfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKT 155
Cdd:TIGR02349  83 FDIGFFGDFGDIFGDFFGGGGG------SGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   156 GA-VQKCSTCRGRGMRIMIRQLAPGMVQQmQSVCTDCNGEGEVIHEKdrCKECDGRKVCKEVKVLEVHVDKGMKHGQKIT 234
Cdd:TIGR02349 157 GTdPKTCPTCGGTGQVRRQQGTPFGFFQQ-QQTCPTCGGEGKIIKEP--CSTCKGKGRVKERKTITVKIPAGVDTGQRLR 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   235 FSGEADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGkvVEPGSIRV 313
Cdd:TIGR02349 234 VSGKGNAGENgGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGD-VKLKIPAG--TQSGTVFR 310
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 47086707   314 VRGEGMPqYRNPFEKGDLFIKFDVQFPENgwISTEKLSELEDLL 357
Cdd:TIGR02349 311 LKGKGVP-RLRGNGRGDLLVTVKVETPKN--LSKEQKELLEELA 351
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
120-340 1.44e-71

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 223.67  E-value: 1.44e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   120 HPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKCSTCRGRGMRIMirqlapgMVQQMQSVCTDCNGEGEVIH 199
Cdd:pfam01556   3 YELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVR-------RQFGFFSTCTCCPCCGGGGK 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   200 EKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLV 278
Cdd:pfam01556  76 IIDKCCKCCGGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGENgGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLT 155
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47086707   279 EALCGFQFMLTHLDGRHlVIKYPPGkvVEPGSIRVVRGEGMPQYrNPFEKGDLFIKFDVQFP 340
Cdd:pfam01556 156 EALLGGTIEVPTLDGKV-KLKIPAG--TQPGTVLRLKGKGMPRL-KGGGRGDLYVTVKVEVP 213
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
116-342 1.15e-47

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 159.90  E-value: 1.15e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707 116 EDMIHPLKVSLEDLYNGKTTKLQLSKNVLcsacngqggktgavqkcstcrgrgmrimirqlapgmvqqmqsvctdcngeg 195
Cdd:cd10747   1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT--------------------------------------------------- 29
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707 196 evihekdrckecdgrkVCKEVKVLEVHVDKGMKHGQKITFSGEADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHK 274
Cdd:cd10747  30 ----------------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNgGPPGDLYVVIRVKPHPVFRRDGNDLYCEVP 93
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086707 275 IGLVEALCGFQFMLTHLDGRhLVIKYPPGKVvePGSIRVVRGEGMPqYRNPFEKGDLFIKFDVQFPEN 342
Cdd:cd10747  94 ISLTEALLGGEIEVPTLGGK-VKLKIPPGTQ--PGTVLRLKGKGMP-RLRGGGRGDLYVEVKVEFPKK 157
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
10-69 5.68e-29

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 110.18  E-value: 5.68e-29
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47086707  10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKKDLYDRY 69
Cdd:COG0484   3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdpeAEEKFKEINEAYEVLSDPEKRAAYDRF 65
DnaJ smart00271
DnaJ molecular chaperone homology domain;
7-62 5.74e-24

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 93.84  E-value: 5.74e-24
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707      7 TKLYDLLGVSPSASENELKKAYRKLAKEYHPDKNPN----AGDKFKEISFAYEVLTNPEK 62
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkeeAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
10-334 1.42e-23

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 101.82  E-value: 1.42e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKN--PNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGMEDI 87
Cdd:NF037946   8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDRNkaPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGGFGFDAFDV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   88 FSHIFGGGLFGFMGGQSSKSRN----------------------------------GGRRRG-----EDMIHPLKVSL-- 126
Cdd:NF037946  88 FSSFFETINKSGAFLDDSVDESvsadddldrlfddskepsftsgldeivqfweafiGNPDYGyydenNEWNLILDKNLft 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  127 -EDLYNGKTTKLQLSKNVL------------------CSACNGQGG---KTGAVQKCSTCRGRGM--------------- 169
Cdd:NF037946 168 pESVIPTKNTDLVTKKDDIvvenfdnlnettyksivdLLNNETSGTlalKDGNKETINISNPTVLsknlefdeqtekldf 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  170 -RIMIRQLAPGMVQ-------------------QMQSVCTDC--NGEGEVIHEKdrCKECDGRKVCKEVKVLEVHVDKGM 227
Cdd:NF037946 248 sKLFLRKQLPRISEtevveqpitnlqepnlniiYEVKIPQILlfNNATKRIKYT--RNDCKGKSYTKEQITLDIQLPITD 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  228 KHGQKITFSGEADQSPNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIG-LVEALCGFQFMLTHLDgrHLVIKYPPGkvV 306
Cdd:NF037946 326 KLKLSVNYPGFGHIVGSKTKGDLTIVFKVIKSKFFKLKKNDIHTAALVDpLVAYNGGEILVPTPNQ--LIKVKIDPG--T 401
                        410       420       430
                 ....*....|....*....|....*....|...
gi 47086707  307 EPGSIRVVRGEGMPQY-----RNPFEKGDLFIK 334
Cdd:NF037946 402 KNNDQIIIKGLGLPARydvvtKTKYDQGDLIIH 434
 
Name Accession Description Interval E-value
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
4-413 9.90e-131

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 382.63  E-value: 9.90e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    4 VADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKnpnAGD--KFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGG 81
Cdd:PTZ00037  25 VDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK---GGDpeKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPA 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 AGMeDIFSHIFggglfgfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKC 161
Cdd:PTZ00037 102 DAS-DLFDLIF-----------GGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDC 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  162 STCRGRGMRIMIRQLAPgMVQQMQSVCTDCNGEGEVIHEKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQ 241
Cdd:PTZ00037 170 KLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADE 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  242 SPNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGKVVEPGSIRVVRGEGMPQ 321
Cdd:PTZ00037 249 KPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPT 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  322 YRNPFEKGDLFIKFDVQFPENGWISTEKLSELEDLLPSRTEVPVISADT--EEVDLQDFDMSQGSSGGHRREAyndSSDE 399
Cdd:PTZ00037 329 YKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNPEEKKDLEDTeiEVVTAQNVDPEEVKDRDQKQQY---QEDE 405
                        410
                 ....*....|....*.
gi 47086707  400 EGGPHGPG--VQCAHQ 413
Cdd:PTZ00037 406 DDEHHQEGerVACRQQ 421
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
10-357 3.26e-85

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 263.69  E-value: 3.26e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN--AGDKFKEISFAYEVLTNPEKKDLYDRY------------GEQGLR 75
Cdd:TIGR02349   3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDkeAEEKFKEINEAYEVLSDPEKRAQYDQFghagfnggggggGGGFNG 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    76 EGGGGGAGMEDIFSHIFGGGLFgfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKT 155
Cdd:TIGR02349  83 FDIGFFGDFGDIFGDFFGGGGG------SGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   156 GA-VQKCSTCRGRGMRIMIRQLAPGMVQQmQSVCTDCNGEGEVIHEKdrCKECDGRKVCKEVKVLEVHVDKGMKHGQKIT 234
Cdd:TIGR02349 157 GTdPKTCPTCGGTGQVRRQQGTPFGFFQQ-QQTCPTCGGEGKIIKEP--CSTCKGKGRVKERKTITVKIPAGVDTGQRLR 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   235 FSGEADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGkvVEPGSIRV 313
Cdd:TIGR02349 234 VSGKGNAGENgGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGD-VKLKIPAG--TQSGTVFR 310
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 47086707   314 VRGEGMPqYRNPFEKGDLFIKFDVQFPENgwISTEKLSELEDLL 357
Cdd:TIGR02349 311 LKGKGVP-RLRGNGRGDLLVTVKVETPKN--LSKEQKELLEELA 351
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
10-392 7.70e-72

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 230.03  E-value: 7.70e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNP---NAGDKFKEISFAYEVLTNPEKKDLYDRY-----GEQGLREGGGGG 81
Cdd:PRK10767   7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgdkEAEEKFKEIKEAYEVLSDPQKRAAYDQYghaafEQGGGGGGFGGG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 AGMEDIFSHIfggglFGFMGGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGA-VQK 160
Cdd:PRK10767  87 GGFGDIFGDI-----FGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTsPKT 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  161 CSTCRGRGmRIMIRQlapG--MVQQmqsVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGE 238
Cdd:PRK10767 162 CPTCHGAG-QVRMQQ---GffTVQQ---TCPTCHGRGKII--KDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGE 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  239 ADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHlVIKYPPGkvVEPGSIRVVRGE 317
Cdd:PRK10767 233 GEAGERgGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRV-KLKIPEG--TQTGKLFRLRGK 309
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47086707  318 GMPQYRNPfEKGDLFIKFDVQFPENgwiSTEKLSELedllpsrtevpvisadteevdLQDFDMSQGSSGGHRREA 392
Cdd:PRK10767 310 GVKSVRSG-ARGDLYCQVVVETPVN---LTKRQKEL---------------------LEEFEESFESGEKHSPKS 359
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
120-340 1.44e-71

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 223.67  E-value: 1.44e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   120 HPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKCSTCRGRGMRIMirqlapgMVQQMQSVCTDCNGEGEVIH 199
Cdd:pfam01556   3 YELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVR-------RQFGFFSTCTCCPCCGGGGK 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   200 EKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLV 278
Cdd:pfam01556  76 IIDKCCKCCGGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGENgGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLT 155
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47086707   279 EALCGFQFMLTHLDGRHlVIKYPPGkvVEPGSIRVVRGEGMPQYrNPFEKGDLFIKFDVQFP 340
Cdd:pfam01556 156 EALLGGTIEVPTLDGKV-KLKIPAG--TQPGTVLRLKGKGMPRL-KGGGRGDLYVTVKVEVP 213
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
10-358 2.07e-61

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 203.08  E-value: 2.07e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPD--KNPNAGDKFKEISFAYEVLTNPEKKDLYDRY-----------GEQGLRE 76
Cdd:PRK14291   6 YEILGVSRNATQEEIKKAYRRLARKYHPDfnKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFghaafsgsgqqQQGQEGF 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   77 GGGGGAGMEDIFSHIFGG--GLFGFMGGQSSKSRNGGRRR---GEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQ 151
Cdd:PRK14291  86 SDFGGGNIEDILEDVFDIfgFGDIFGRRRATRERRKTYQRpvkGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGT 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  152 GGKTGAVQK-CSTCRGRGmriMIRQlaPGMVQQMQSVCTDCNGEGeVIHEKdrCKECDGRKVCKEVKVLEVHVDKGMKHG 230
Cdd:PRK14291 166 GYDPGSGEKvCPTCGGSG---EIYQ--RGGFFRISQTCPTCGGEG-VLREP--CSKCNGRGLVIKKETIKVRIPPGVDNG 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  231 QKITFSGEADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGkvVEPG 309
Cdd:PRK14291 238 SKLRVPGKGHAGRFgGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPG--TKEG 315
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 47086707  310 SIRVVRGEGMPQYRNPfEKGDLFIKFDVQFPENGWIST---------EKLSELEDLLP 358
Cdd:PRK14291 316 DKIRVPGKGMPRLKGS-GYGDLVVRVHIDVPKISMLSKlmgdgkkakKLLKELDKLLP 372
PRK14289 PRK14289
molecular chaperone DnaJ;
10-368 3.75e-61

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 202.75  E-value: 3.75e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNP---NAGDKFKEISFAYEVLTNPEKKDLYDRY------GEQGLREGGGG 80
Cdd:PRK14289   8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPgdkEAEEKFKEAAEAYDVLSDPDKRSRYDQFghagvgGAAGGGGFSGE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   81 GAGMEDIFSHIFGGGLFGFMGGQSSKSRNGGR-----RRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGK- 154
Cdd:PRK14289  88 GMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGsqqrvFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEg 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  155 TGAVQKCSTCRGRGMRIMIRQLAPGMVQQmQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKIT 234
Cdd:PRK14289 168 NNGSETCPTCKGSGSVTRVQNTILGTMQT-QSTCPTCNGEGKII--KKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLS 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  235 FSGEADQSP-NTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGkvVEPGSIRV 313
Cdd:PRK14289 245 MNGKGNAGKhGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAG--TQPGKVLR 321
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 47086707  314 VRGEGMPQYrNPFEKGDLFIKFDVQFPENgwISTEKLSELEDLLPSRTEVPVISA 368
Cdd:PRK14289 322 LRNKGLPSV-NGYGTGDLLVNVSVYIPET--LSKEEKQTLEKMENSDNFKPTTSI 373
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
10-372 4.70e-61

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 202.73  E-value: 4.70e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKKDLYDRY---------GEQGLREG 77
Cdd:PRK14281   6 YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDnkeAEEHFKEVNEAYEVLSNDDKRRRYDQFghagvgssaASGGGPGY 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   78 GGGGAGMEDIFSHIFGGGLFGFMGGQSSKSR------NGGRRR-------GEDMIHPLKVSLEDLYNGKTTKLQLSKNVL 144
Cdd:PRK14281  86 GGGGGDFNDIFSAFNDMFGGGARRGGGSPFGfedvfgGGGRRRrasagipGTDLKIRLKLTLEEIAKGVEKTLKIKKQVP 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  145 CSACNGQGGKTGAVQKCSTCRGRGmriMIRQLAPGMVQQMQSV--CTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVH 222
Cdd:PRK14281 166 CKECNGTGSKTGATETCPTCHGSG---EVRQASKTMFGQFVNItaCPTCGGEGRVV--KDRCPACYGEGIKQGEVTVKVT 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  223 VDKGMKHGQKITFSGEADQSP-NTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGrHLVIKYP 301
Cdd:PRK14281 241 VPAGVQDGNYLTLRGQGNAGPrGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDG-AVKLTIP 319
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47086707  302 PGkvVEPGSIRVVRGEGMPQYRNPfEKGDLFIKFDVQFPENgwISTEKLSELEDLLPSRTEVPVISADTEE 372
Cdd:PRK14281 320 AG--TQPETMLRIPGKGIGHLRGS-GRGDQYVRVNVFVPKE--VSHQDKELLKELKKSSHISPNAHNDKEE 385
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
10-341 1.03e-60

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 201.21  E-value: 1.03e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKN--PNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQG----LREGGGGGAG 83
Cdd:PRK14283   8 YEVLGVDRNADKKEIKKAYRKLARKYHPDVSeeEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGmdgfSQEDIFNNIN 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   84 MEDIFSHIFGGGLFGFMGGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGA-VQKCS 162
Cdd:PRK14283  88 FEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSeVKTCP 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  163 TCRGRGMRIMIRQLAPGmvqQMQSV--CTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEAD 240
Cdd:PRK14283 168 TCGGTGQVKQVRNTILG---QMMNVttCPDCQGEGKIV--EKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGE 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  241 QS-PNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGkvVEPGSIRVVRGEGM 319
Cdd:PRK14283 243 MGdRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGP-VELKIPAG--TQSGTTFRLKGHGM 319
                        330       340
                 ....*....|....*....|..
gi 47086707  320 PQYRNPfEKGDLFIKFDVQFPE 341
Cdd:PRK14283 320 PSLRWS-GKGNLYVKVKVVVPK 340
PRK14293 PRK14293
molecular chaperone DnaJ;
10-363 1.52e-58

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 195.59  E-value: 1.52e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPD--KNPNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGME-- 85
Cdd:PRK14293   6 YEILGVSRDADKDELKRAYRRLARKYHPDvnKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDMGDmg 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   86 ---DIFSHIfgGGLFGFMGGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTG-AVQKC 161
Cdd:PRK14293  86 gfaDIFETF--FSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGtGPTTC 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  162 STCRGRG-MRIMIRqlAP-GMVQQMqSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEA 239
Cdd:PRK14293 164 STCGGAGqVRRATR--TPfGSFTQV-SECPTCNGTGQVI--EDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  240 DQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGR-HLVIkyPPGkvVEPGSIRVVRGE 317
Cdd:PRK14293 239 DAGLRGGPpGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPvELTI--PAG--TQPNTVLTLENK 314
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 47086707  318 GMPQYRNPFEKGDLFIKFDVQFPENgwISTEKLSELEDLLPSRTEV 363
Cdd:PRK14293 315 GVPRLGNPVARGDHLITVKVKIPTR--ISDEERELLEKLAKIKGER 358
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
10-357 1.59e-58

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 195.45  E-value: 1.59e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKN--PNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGA----- 82
Cdd:PRK14298   8 YEILGLSKDASVEDIKKAYRKLAMKYHPDKNkePDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDifrga 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   83 ---GMEDIFSHIFGGglfgfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQ 159
Cdd:PRK14298  88 dfgGFGDIFEMFFGG---------GGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  160 K-CSTCRGRGMRIMIRQlAPGMVQQMQSVCTDCNGEGEVIHEKdrCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGE 238
Cdd:PRK14298 159 KrCPTCGGTGQVTTTRS-TPLGQFVTTTTCSTCHGRGQVIESP--CPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGE 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  239 ADQ-SPNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGkvVEPGSIRVVRGE 317
Cdd:PRK14298 236 GEAgSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPG--TQTHSVFRLKDK 312
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 47086707  318 GMPQYrNPFEKGDLFIKFDVQFPENgwISTEK---LSELEDLL 357
Cdd:PRK14298 313 GMPRL-HGHGKGDQLVKVIVKTPTK--LTQEQkelLREFDELS 352
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
10-342 2.81e-58

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 194.60  E-value: 2.81e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNP---NAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGM-E 85
Cdd:PRK14294   7 YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPgdkEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFSGfD 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   86 DIFSHIFGGGLFGFMGGQSSKSRNGGR-RRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGA-VQKCST 163
Cdd:PRK14294  87 DIFSSFGDIFEDFFGFGGGRRGRSRTAvRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTsPTTCPQ 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  164 CRGRGMRIMirqlAPGMVqQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQSP 243
Cdd:PRK14294 167 CGGSGQVTQ----SQGFF-SIRTTCPRCRGMGKVI--VSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGV 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  244 NTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHlVIKYPPGkvVEPGSIRVVRGEGMPQY 322
Cdd:PRK14294 240 RGGPpGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGER-ELKIPKG--TQPGDIFRFKGKGIPSL 316
                        330       340
                 ....*....|....*....|
gi 47086707  323 RNpFEKGDLFIKFDVQFPEN 342
Cdd:PRK14294 317 RG-GGRGDQIIEVEVKVPTR 335
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
10-340 5.46e-58

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 194.12  E-value: 5.46e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN--AGDKFKEISFAYEVLTNPEKKDLYD------RYGEQGLREGGGGG 81
Cdd:PRK14278   6 YGLLGVSRNASDAEIKRAYRKLARELHPDVNPDeeAQEKFKEISVAYEVLSDPEKRRIVDlggdplESAGGGGGGFGGGF 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 AGMEDIFSHIFGGglfgfmggqSSKSRnGGR---RRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAV 158
Cdd:PRK14278  86 GGLGDVFEAFFGG---------GAASR-GPRgrvRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSK 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  159 -QKCSTCRGRGmriMIRQLAPGMVQQMQSV--CTDCNGEGEVIheKDRCKEC--DGRkvCKEVKVLEVHVDKGMKHGQKI 233
Cdd:PRK14278 156 pVTCDTCGGRG---EVQTVQRSFLGQVMTSrpCPTCRGVGEVI--PDPCHECagDGR--VRARREITVKIPAGVGDGMRI 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  234 TFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGkvVEPGSIR 312
Cdd:PRK14278 229 RLAAQGEVGPGGGPaGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPG--TQPGSVI 306
                        330       340
                 ....*....|....*....|....*...
gi 47086707  313 VVRGEGMPQYRNPfEKGDLFIKFDVQFP 340
Cdd:PRK14278 307 TLRGRGMPHLRSG-GRGDLHAHVEVVVP 333
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
4-341 1.85e-56

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 190.20  E-value: 1.85e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    4 VADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLRE---- 76
Cdd:PRK14286   1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNkgnKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAgagg 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   77 -GGGGGAGMEDIFSHIFGGGLFGFMGGQSSKSrNGGRR----RGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQ 151
Cdd:PRK14286  81 fGQGAYTDFSDIFGDFGDIFGDFFGGGRGGGS-GGGRRsgpqRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGS 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  152 GGKTGAVQK-CSTCRGRGmriMIRQlAPGMVqQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHG 230
Cdd:PRK14286 160 GASKGSSPTtCPDCGGSG---QIRR-TQGFF-SVATTCPTCRGKGTVI--SNPCKTCGGQGLQEKRRTINIKIPPGVETG 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  231 QKITFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGkvVEPG 309
Cdd:PRK14286 233 SRLKVSGEGEAGPNGGPhGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEG--TESG 310
                        330       340       350
                 ....*....|....*....|....*....|..
gi 47086707  310 SIRVVRGEGMPqYRNPFEKGDLFIKFDVQFPE 341
Cdd:PRK14286 311 QVFRLKGHGMP-YLGAYGKGDQHVIVKIEIPK 341
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
10-340 1.70e-54

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 184.95  E-value: 1.70e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGG--AGM 84
Cdd:PRK14301   7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDnpeAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGgfSSA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   85 EDIFSHIFGGGLFGFMGGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAV-QKCST 163
Cdd:PRK14301  87 EDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSpETCRH 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  164 CRGRGmriMIRQlAPGMVqQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQSP 243
Cdd:PRK14301 167 CGGSG---QVRQ-SQGFF-QIAVPCPVCRGEGRVI--THPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGV 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  244 NTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGrHLVIKYPPGkvVEPGSIRVVRGEGMPqY 322
Cdd:PRK14301 240 HGGPpGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDD-PVTLDIPKG--TQSGEVFRLRGKGLP-Y 315
                        330
                 ....*....|....*...
gi 47086707  323 RNPFEKGDLFIKFDVQFP 340
Cdd:PRK14301 316 LGSSQKGDLLVEVSVVTP 333
PRK14280 PRK14280
molecular chaperone DnaJ;
10-353 5.93e-54

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 183.38  E-value: 5.93e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPD--KNPNAGDKFKEISFAYEVLTNPEKKDLYDRY----------GEQGLREG 77
Cdd:PRK14280   7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDinKEEGADEKFKEISEAYEVLSDDQKRAQYDQFghagpnqgfgGGGFGGGD 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   78 GGGGAGMEDIFSHIFGgglfgfmggqssksrNGGRRR-------GEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNG 150
Cdd:PRK14280  87 FGGGFGFEDIFSSFFG---------------GGGRRRdpnaprqGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHG 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  151 QGGKTGAVQK-CSTCRGRGmRIMIRQLAP-GMVQQmQSVCTDCNGEGEVIHEKdrCKECDGRKVCKEVKVLEVHVDKGMK 228
Cdd:PRK14280 152 SGAKPGTSKEtCSHCGGSG-QVSVEQNTPfGRVVN-RQTCPHCNGTGQEIKEK--CPTCHGKGKVRKRKKINVKIPAGVD 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  229 HGQKITFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGrHLVIKYPPGkvVE 307
Cdd:PRK14280 228 NGQQIRVSGEGEPGVNGGPaGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHG-KVKLKIPAG--TQ 304
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 47086707  308 PGSIRVVRGEGMPQYRNpFEKGDLFIKFDVQFPENgwiSTEKLSEL 353
Cdd:PRK14280 305 TGTQFRLKGKGVPNVRG-YGQGDQYVVVRVVTPTK---LTDRQKEL 346
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
1-353 2.49e-53

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 182.31  E-value: 2.49e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    1 MANVADtkLYDLLGVSPSASENELKKAYRKLAKEYHPDKNP---NAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREG 77
Cdd:PRK14277   1 MAAKKD--YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPgdkEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPG 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   78 GGGGAGME-----------------DIFSHIFGGGLFGfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLS 140
Cdd:PRK14277  79 GFGQGGFGqggfggggfdfdfggfgDIFEDIFGDFFGT-----GRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVE 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  141 KNVLCSACNGQGGKTGA-VQKCSTCRGRGmRIMIRQLAP-GMVQQMQSvCTDCNGEGEVIheKDRCKECDGRKVCKEVKV 218
Cdd:PRK14277 154 RFEKCDVCKGSGAKPGSkPVTCPVCHGTG-QVRTRQNTPfGRIVNIRT-CDRCHGEGKII--TDPCNKCGGTGRIRRRRK 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  219 LEVHVDKGMKHGQKITFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLV 297
Cdd:PRK14277 230 IKVNIPAGIDDGQMITLRGEGEPGIKGGPnGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VK 308
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 47086707  298 IKYPPGkvVEPGSIRVVRGEGMPqYRNPFEKGDLFIKFDVQFPENgwiSTEKLSEL 353
Cdd:PRK14277 309 FTIPEG--TQTGTKFRLRGKGIP-HLRGRGRGDQIVKVYIEVPKK---LTEKQKEL 358
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
10-360 3.19e-52

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 178.83  E-value: 3.19e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN----AGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGME 85
Cdd:PRK14282   7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEnrkeAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETESGG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   86 DIFSHIFGGGLFGFM---------GGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTG 156
Cdd:PRK14282  87 GFFEDIFKDFENIFNrdifdiffgERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPG 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  157 A-VQKCSTCRGRGmRIMIRQLAPGMVQQMQSVCTDCNGEGEVIHEKdrCKECDGR-KVCKEVKVlEVHVDKGMKHGQKIT 234
Cdd:PRK14282 167 SgYVTCPKCHGTG-RIREERRSFFGVFVSERTCERCGGTGKIPGEY--CHECGGSgRIRRRVRT-TVKIPAGVEDGTVLR 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  235 FSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGkvVEPGSIRV 313
Cdd:PRK14282 243 ITGGGNAGYYGGPyGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPG--TQPETVFR 320
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 47086707  314 VRGEGMPQYRNPfEKGDLFIKFDVQFPENgwISTEKLSELEDLLPSR 360
Cdd:PRK14282 321 LKGKGLPNMRYG-RRGDLIVNVHVEIPKR--LSREERKLLKELAKKR 364
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
5-323 3.28e-51

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 176.43  E-value: 3.28e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    5 ADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKN--PNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGA 82
Cdd:PRK14276   2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINkePGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   83 GM-------------EDIFSHIfggglfgfmGGQSSKSRN-GGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSAC 148
Cdd:PRK14276  82 GGfggfdgsggfggfEDIFSSF---------FGGGGARRNpNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTC 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  149 NGQGGKTG-AVQKCSTCRGRGMRIMIRQLAPGMVQQmQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGM 227
Cdd:PRK14276 153 NGSGAKPGtSPVTCGKCHGSGVITVDTQTPLGMMRR-QVTCDVCHGTGKEI--KEPCQTCHGTGHEKQAHTVSVKIPAGV 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  228 KHGQKITFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGrHLVIKYPPGkvV 306
Cdd:PRK14276 230 ETGQQIRLQGQGEAGFNGGPyGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHG-DVELKIPAG--T 306
                        330
                 ....*....|....*..
gi 47086707  307 EPGSIRVVRGEGMPQYR 323
Cdd:PRK14276 307 QTGKKFRLRGKGAPKLR 323
PRK14297 PRK14297
molecular chaperone DnaJ;
10-342 6.63e-48

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 167.65  E-value: 6.63e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKKDLYDRYGEQG------------L 74
Cdd:PRK14297   7 YEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGnkeAEEKFKEINEAYQVLSDPQKKAQYDQFGTADfngaggfgsggfG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   75 REGGGGGAGMEDIFSHIFGGGLFgfmggqSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGK 154
Cdd:PRK14297  87 GFDFSDMGGFGDIFDSFFGGGFG------SSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  155 TGAVQK-CSTCRGRGmRIMIRQLAPGMVQQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKI 233
Cdd:PRK14297 161 PGTSPKtCDKCGGTG-QIRVQRNTPLGSFVSTTTCDKCGGSGKVI--EDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVI 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  234 TFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhlvIKY--PPGkvVEPGS 310
Cdd:PRK14297 238 PLRGQGEHGKNGGPtGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE---VKYevPAG--TQPGT 312
                        330       340       350
                 ....*....|....*....|....*....|..
gi 47086707  311 IRVVRGEGMPqYRNPFEKGDLFIKFDVQFPEN 342
Cdd:PRK14297 313 VFRLKGKGVP-RVNSTGRGNQYVTVIVDIPKK 343
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
116-342 1.15e-47

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 159.90  E-value: 1.15e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707 116 EDMIHPLKVSLEDLYNGKTTKLQLSKNVLcsacngqggktgavqkcstcrgrgmrimirqlapgmvqqmqsvctdcngeg 195
Cdd:cd10747   1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT--------------------------------------------------- 29
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707 196 evihekdrckecdgrkVCKEVKVLEVHVDKGMKHGQKITFSGEADQSPN-TEPGDIILVLQEKDHEEFRRDGNDLHIGHK 274
Cdd:cd10747  30 ----------------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNgGPPGDLYVVIRVKPHPVFRRDGNDLYCEVP 93
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086707 275 IGLVEALCGFQFMLTHLDGRhLVIKYPPGKVvePGSIRVVRGEGMPqYRNPFEKGDLFIKFDVQFPEN 342
Cdd:cd10747  94 ISLTEALLGGEIEVPTLGGK-VKLKIPPGTQ--PGTVLRLKGKGMP-RLRGGGRGDLYVEVKVEFPKK 157
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
10-354 1.62e-47

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 166.60  E-value: 1.62e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPNAG--DKFKEISFAYEVLTNPEKKDLYDRYGEQGLREG------GGGG 81
Cdd:PRK14292   5 YELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGaaEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMpggdpfGGMG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 AGMEDIFSHIFGGGLFGFmggqssksrNGGRR---RGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGA- 157
Cdd:PRK14292  85 FDPMDIFEQLFGGAGFGG---------GRGRRgpaRGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGk 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  158 -VQKCSTCRGRGMRIMIRQLAPGMVQQMQsVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFS 236
Cdd:PRK14292 156 pPKTCPTCRGAGAVRAQARTIFGVVETQQ-PCPTCRGEGQII--TDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVA 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  237 GEADQSPNTEpGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHlVIKYPPGkvVEPGSIRVVRG 316
Cdd:PRK14292 233 GMGNEGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQ-VIEVKPG--TQHGDLHRLRG 308
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 47086707  317 EGMPQYRNPfEKGDLFIKFDVQFPENgwISTEKLSELE 354
Cdd:PRK14292 309 QGMPRLQGA-GTGDLIVEYEIAVPKQ--LSPEAREALE 343
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
10-342 2.58e-46

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 163.86  E-value: 2.58e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNP---NAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGG-----GGG 81
Cdd:PRK14284   4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPgdaEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAggfggAGM 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 AGMEDIFSHIFGGGLFGFMGGQS--------------SKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSA 147
Cdd:PRK14284  84 GNMEDALRTFMGAFGGEFGGGGSffeglfgglgeafgMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDA 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  148 CNGQGGKTG-AVQKCSTCRGRGMRIMIRQLApgmvqQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKG 226
Cdd:PRK14284 164 CSGSGANSSqGIKVCDRCKGSGQVVQSRGFF-----SMASTCPECGGEGRVI--TDPCSVCRGQGRIKDKRSVHVHIPAG 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  227 MKHGQKITFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFML-THLDGRHLVIKYPPGk 304
Cdd:PRK14284 237 VDSGMRLKMEGYGDAGQNGAPaGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIpTLLKEGTCRLTIPEG- 315
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 47086707  305 vVEPGSIRVVRGEGMPQYRNPfEKGDLFIKFDVQFPEN 342
Cdd:PRK14284 316 -IQSGTILKVRGQGFPNVHGK-GRGDLLVRISVETPQN 351
PRK14295 PRK14295
molecular chaperone DnaJ;
10-342 4.84e-46

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 163.10  E-value: 4.84e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLTNPEKKDLYDR----------YGEQGLRE 76
Cdd:PRK14295  12 YKVLGVPKDATEAEIKKAYRKLAREYHPDANkgdAKAEERFKEISEAYDVLSDEKKRKEYDEarslfgnggfRPGPGGGG 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   77 GGGGGAGMEDIFSHIFGGGLFGFMGGQSSK------SRNGGR---RRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSA 147
Cdd:PRK14295  92 GGGFNFDLGDLFGGGAQGGGGAGGGGGLGDvfgglfNRGGRRtqpRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPA 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  148 CNGQGGKTGAVQK-CSTCRGRGmriMIRQLAPGMvqQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKG 226
Cdd:PRK14295 172 CSGTGAKNGTTPRvCPTCSGTG---QVSRNSGGF--SLSEPCPDCKGRGLIA--DDPCLVCKGSGRAKSSRTMQVRIPAG 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  227 MKHGQKITFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGkv 305
Cdd:PRK14295 245 VSDGQRIRLRGKGAPGERGGPaGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPG-- 322
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 47086707  306 VEPGSIRVVRGEGMPqyRNPFEKGDLFIKFDVQFPEN 342
Cdd:PRK14295 323 TPNGRVLRVRGKGAV--RKDGTRGDLLVTVEVAVPKD 357
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
10-356 7.83e-46

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 162.04  E-value: 7.83e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPD--KNPNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQG---LREGGGGGAGM 84
Cdd:PRK14296   7 YEVLGVSKTASEQEIRQAYRKLAKQYHPDlnKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAfdgSSGFSSNFGDF 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   85 EDIFSHIFGGGLFG-----FMGGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNG--KTTKLQLSKNvlCSACNGQGGKTGA 157
Cdd:PRK14296  87 EDLFSNMGSSGFSSftnifSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGvdKIIELDLLTN--CSKCFGSGAESNS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  158 -VQKCSTCRGRGMRIMIRQLAPGMVQQmQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFS 236
Cdd:PRK14296 165 dIHICNNCHGTGEVLVQKNMGFFQFQQ-SAKCNVCNGAGKII--KNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLS 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  237 GEADQSPNTE-PGDIILVLQEKDHEEFRR-DGNDLHIGHKIGLVEALCGFQFMLTHLDGRhlvIKYPPGKVVEPGSIRVV 314
Cdd:PRK14296 242 QKGHASLNNGvNGDLIIDIYLKESKVFEIiNNNDILMTYNISYLDAILGNEIIIKTLDGD---IKYKLPKSINSNELIII 318
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 47086707  315 RGEGMPQYRNPFEKGDLFIKFDVQFPENgwISTEKLSELEDL 356
Cdd:PRK14296 319 NNKGLYKSINKDKRGDLIIKVNIVVPKN--LSKKEKELIEQI 358
PRK14279 PRK14279
molecular chaperone DnaJ;
5-342 1.19e-45

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 161.82  E-value: 1.19e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707    5 ADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKKDLYDRYGE---------- 71
Cdd:PRK14279   7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGdpaAEERFKAVSEAHDVLSDPAKRKEYDETRRlfagggfggr 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   72 ---------QGLREGGGGGAGMEDIFSHIFGGGLFGFMG------GQSSKSRNGGR-RRGEDMIHPLKVSLEDLYNGKTT 135
Cdd:PRK14279  87 rfdggggfgGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDlfgglfNRGGGSARPSRpRRGNDLETETTLDFVEAAKGVTM 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  136 KLQLSKNVLCSACNGQGGKTG-AVQKCSTCRGRGMrIMIRQLAPGMVQQmqsvCTDCNGEGEVIheKDRCKECDGRKVCK 214
Cdd:PRK14279 167 PLRLTSPAPCTTCHGSGARPGtSPKVCPTCNGSGV-ISRNQGAFGFSEP----CTDCRGTGSII--EDPCEECKGTGVTT 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  215 EVKVLEVHVDKGMKHGQKITFSGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDG 293
Cdd:PRK14279 240 RTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPsGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDG 319
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 47086707  294 RhLVIKYPPGKVvePGSIRVVRGEGMPqyRNPFEKGDLFIKFDVQFPEN 342
Cdd:PRK14279 320 P-VGVKVPAGTA--DGRILRVRGRGVP--KRSGGAGDLLVTVKVAVPPN 363
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
10-356 1.94e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 158.23  E-value: 1.94e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGG----- 81
Cdd:PRK14285   6 YEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGnkeAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEgfsgg 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   82 -AGMEDIFSHIFGGGLFGFMGGQsSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQK 160
Cdd:PRK14285  86 fSGFSDIFEDFGDIFDSFFTGNR-GQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  161 -CSTCRGRGmrimiRQLAPGMVQQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEA 239
Cdd:PRK14285 165 iCNMCNGSG-----RVMQGGGFFRVTTTCPKCYGNGKII--SNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKG 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  240 DQSP-NTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGkvVEPGSIRVVRGEG 318
Cdd:PRK14285 238 SVNPdNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKG--TENDEQIIIKNEG 315
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 47086707  319 MPQYRNpfEK-GDLFIKFDVQFPENgwISTEKLSELEDL 356
Cdd:PRK14285 316 MPILHT--EKfGNLILIIKIKTPKN--LNSNAIKLLENL 350
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
10-353 2.59e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 157.86  E-value: 2.59e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPD--KNPNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLRE-----GGGGGA 82
Cdd:PRK14287   7 YEVLGVDRNASVDEVKKAYRKLARKYHPDvnKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQgfgggGAGDFG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   83 GMEDIFSHIFGGglfgfmggqssksrNGGR------RRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTG 156
Cdd:PRK14287  87 GFSDIFDMFFGG--------------GGGRrnpnapRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  157 AV-QKCSTCRGRGmRIMIRQLAPGMVQQMQSVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITF 235
Cdd:PRK14287 153 TKpETCSHCGGSG-QLNVEQNTPFGRVVNRRVCHHCEGTGKII--KQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRV 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  236 SGEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGkvVEPGSIRVV 314
Cdd:PRK14287 230 SGQGEAGVNGGPpGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAG--TQTGTSFRL 306
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 47086707  315 RGEGMPQYRNPfEKGDLFIKFDVQFPENgwiSTEKLSEL 353
Cdd:PRK14287 307 RGKGVPNVHGR-GQGDQHVQVRVVTPKN---LTEKEKEL 341
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
10-341 6.92e-44

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 156.63  E-value: 6.92e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN----AGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGG----- 80
Cdd:PRK14290   6 YKILGVDRNASQEDIKKAFRELAKKWHPDLHPGnkaeAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNfnwdn 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   81 ---GAGMEDIFSHIFGGGLFGFMGGQSSKsRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGA 157
Cdd:PRK14290  86 fthFSDINDIFNQIFGGNFGSDFFSGFGN-QQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGK 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  158 VQKCSTCRGRGMRIMIRqlAPGMVQQMQ-SVCTDCNGEGEVIHEKdrCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFS 236
Cdd:PRK14290 165 LITCPTCHGTGQQRIVR--GQGFFRMVTvTTCRTCGGRGRIPEEK--CPRCNGTGTVVVNEDISVKIPKGATDNLRLRVK 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  237 GEAdQSPNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHlVIKYPPGkvVEPGSIRVVRG 316
Cdd:PRK14290 241 GKG-QSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKY-NLKIPEG--TQPGEVLKIKG 316
                        330       340
                 ....*....|....*....|....*
gi 47086707  317 EGMPQYrNPFEKGDLFIKFDVQFPE 341
Cdd:PRK14290 317 AGMPHL-NGHGSGDLLVRINVEVPK 340
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
10-356 2.01e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 147.47  E-value: 2.01e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDkNPNAGD---KFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGME- 85
Cdd:PRK14300   6 YQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDaekKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGGNh 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   86 --------DIFSHIFGGGLFGFMGGQSSKSRnggrRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTG- 156
Cdd:PRK14300  85 ggfhpdinDIFGDFFSDFMGGSRRSRPTSSK----VRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGe 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  157 AVQKCSTCRGRGMRIMirQLAPGMVQQmqsVCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFS 236
Cdd:PRK14300 161 TVTTCDACSGVGATRM--QQGFFTIEQ---ACHKCQGNGQII--KNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHT 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  237 GEADQS-PNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGkvVEPGSIRVVR 315
Cdd:PRK14300 234 GEGEAGiRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAG--TQNGDQLRLR 311
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 47086707  316 GEGMPQYRNPFeKGDLFIKFDVQFPENgwISTEKLSELEDL 356
Cdd:PRK14300 312 SKGMSKMRSTI-RGDMLTHIHVEVPKN--LSKRQRELLEEF 349
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
9-67 1.71e-29

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 108.71  E-value: 1.71e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47086707     9 LYDLLGVSPSASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLTNPEKKDLYD 67
Cdd:pfam00226   2 YYEILGVSPDASDEEIKKAYRKLALKYHPDKNpgdPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
10-69 5.68e-29

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 110.18  E-value: 5.68e-29
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47086707  10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKKDLYDRY 69
Cdd:COG0484   3 YEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdpeAEEKFKEINEAYEVLSDPEKRAAYDRF 65
PRK14288 PRK14288
molecular chaperone DnaJ;
10-359 4.19e-28

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 114.02  E-value: 4.19e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNP---NAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGMED 86
Cdd:PRK14288   6 YEILEVEKHSNQETIKKSYRKLALKYHPDRNAgdkEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQSDFSD 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   87 IFSHIFGGGLFGFMGGQSSKSRNGGrRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKCSTCRG 166
Cdd:PRK14288  86 FFEDLGSFFEDAFGFGARGSKRQKS-SIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNG 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  167 RGmRIMIRQlapGMVQQMQSvCTDCNGEGEVIheKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQSPNTE 246
Cdd:PRK14288 165 QG-QVFMRQ---GFMSFAQT-CGACQGKGKII--KTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGK 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  247 PGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPpgKVVEPGSIRVVRGEGMPQYRNPF 326
Cdd:PRK14288 238 RGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIP--RNARDRQTFAFRNEGVKHPESSY 315
                        330       340       350
                 ....*....|....*....|....*....|...
gi 47086707  327 eKGDLFIKFDVQFPENgwISTEKLSELEDLLPS 359
Cdd:PRK14288 316 -RGSLIVELQVIYPKS--LNKEQQELLEKLHAS 345
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
10-360 1.66e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 102.32  E-value: 1.66e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPD--KNPNAGDKFKEISFAYEVLTNPEKKDLYDRYgeqglregggggagmedi 87
Cdd:PRK14299   7 YAILGVPKNASQDEIKKAFKKLARKYHPDvnKSPGAEEKFKEINEAYTVLSDPEKRRIYDTY------------------ 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   88 fshiFGGGLFGFMGGQSSKSRNGGRRRGEDmIHPLKVSLEDLYNGKttklqlsknvlcsacngqgGKTGAVQKCSTCRGR 167
Cdd:PRK14299  69 ----GTTAASAGWQGPPPGPPGGGDFSGFN-VGDFSDFFQQLFGGR-------------------GGFGGFGDLFGSVGR 124
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  168 GMRIMiRQLAPGMVQQMQsvctdcngegEVIHEKDRCKECDGRKvckevkvLEVHVDKGMKHGQKITFSGEADQSpntep 247
Cdd:PRK14299 125 RARKG-RDLEAELPLTLE----------EAYRGGEKVVEVAGER-------LSVRIPPGVREGQVIRLAGKGRQG----- 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  248 GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGkvVEPGSIRVVRGEGMPqyRNPFE 327
Cdd:PRK14299 182 GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPR--TQAGRKLRLKGKGWP--RGPAG 256
                        330       340       350
                 ....*....|....*....|....*....|....
gi 47086707  328 KGDLFIKFDVQFPENGWISTEKL-SELEDLLPSR 360
Cdd:PRK14299 257 RGDQYAEVRITIPTRPTPEEERLyKQLAELYKVR 290
DnaJ_CXXCXGXG pfam00684
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ...
145-211 2.06e-24

DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.


Pssm-ID: 459904 [Multi-domain]  Cd Length: 65  Bit Score: 95.32  E-value: 2.06e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086707   145 CSACNGQGGKTGA-VQKCSTCRGRGMRIMIRQLAPGMVqQMQSVCTDCNGEGEVIheKDRCKECDGRK 211
Cdd:pfam00684   1 CPTCNGSGAKPGTkPTTCPTCGGTGQVRRVQQTGPGFF-QMQSTCPTCGGTGKII--KDPCKKCKGKG 65
DnaJ smart00271
DnaJ molecular chaperone homology domain;
7-62 5.74e-24

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 93.84  E-value: 5.74e-24
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707      7 TKLYDLLGVSPSASENELKKAYRKLAKEYHPDKNPN----AGDKFKEISFAYEVLTNPEK 62
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkeeAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
10-334 1.42e-23

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 101.82  E-value: 1.42e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDKN--PNAGDKFKEISFAYEVLTNPEKKDLYDRYGEQGLREGGGGGAGMEDI 87
Cdd:NF037946   8 YEVLGVDRDADDQEIKKAFRKLAKKYHPDRNkaPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGGFGFDAFDV 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   88 FSHIFGGGLFGFMGGQSSKSRN----------------------------------GGRRRG-----EDMIHPLKVSL-- 126
Cdd:NF037946  88 FSSFFETINKSGAFLDDSVDESvsadddldrlfddskepsftsgldeivqfweafiGNPDYGyydenNEWNLILDKNLft 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  127 -EDLYNGKTTKLQLSKNVL------------------CSACNGQGG---KTGAVQKCSTCRGRGM--------------- 169
Cdd:NF037946 168 pESVIPTKNTDLVTKKDDIvvenfdnlnettyksivdLLNNETSGTlalKDGNKETINISNPTVLsknlefdeqtekldf 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  170 -RIMIRQLAPGMVQ-------------------QMQSVCTDC--NGEGEVIHEKdrCKECDGRKVCKEVKVLEVHVDKGM 227
Cdd:NF037946 248 sKLFLRKQLPRISEtevveqpitnlqepnlniiYEVKIPQILlfNNATKRIKYT--RNDCKGKSYTKEQITLDIQLPITD 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  228 KHGQKITFSGEADQSPNTEPGDIILVLQEKDHEEFRRDGNDLHIGHKIG-LVEALCGFQFMLTHLDgrHLVIKYPPGkvV 306
Cdd:NF037946 326 KLKLSVNYPGFGHIVGSKTKGDLTIVFKVIKSKFFKLKKNDIHTAALVDpLVAYNGGEILVPTPNQ--LIKVKIDPG--T 401
                        410       420       430
                 ....*....|....*....|....*....|...
gi 47086707  307 EPGSIRVVRGEGMPQY-----RNPFEKGDLFIK 334
Cdd:NF037946 402 KNNDQIIIKGLGLPARydvvtKTKYDQGDLIIH 434
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
10-63 2.27e-23

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 92.37  E-value: 2.27e-23
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47086707  10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTNPEKK 63
Cdd:COG5407   3 YEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGdpkAEERFKEINEAYELLSDAEKR 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
10-59 4.63e-22

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 88.37  E-value: 4.63e-22
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 47086707  10 YDLLGVSPSASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLTN 59
Cdd:cd06257   3 YDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdpeAEEKFKEINEAYEVLSD 55
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
145-211 1.19e-20

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 85.00  E-value: 1.19e-20
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086707 145 CSACNGQGGKTGA-VQKCSTCRGRGMRIMIRQLaPGMVQQMQSVCTDCNGEGEVIheKDRCKECDGRK 211
Cdd:cd10719   1 CPTCNGSGAKPGTkPKTCPTCGGSGQVRQVQGT-GFGFFQTQTTCPTCGGTGKII--KDPCPKCKGKG 65
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-68 1.35e-18

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 80.15  E-value: 1.35e-18
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47086707   1 MANVADtkLYDLLGVSPSASENELKKAYRKLAKEYHPDKNPN----AGDKFKEISFAYEVLTNPEKKDLYDR 68
Cdd:COG2214   1 MPDLKD--HYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGElkalAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK10266 PRK10266
curved DNA-binding protein;
10-340 3.95e-16

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 78.32  E-value: 3.95e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPD--KNPNAGDKFKEISFAYEVLTNPEKKDLYDRY-----------GEQGLRE 76
Cdd:PRK10266   7 YAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLwqhrndpqfnrQFQHGDG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707   77 GGGGGAGMEDIFSHIfggglfgfMGGQSSKSRNGGRRRGEDMIHPLKVSLEDLYNGKTTKLQLSKNVLCsacngqggktg 156
Cdd:PRK10266  87 QSFNAEDFDDIFSSI--------FGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYN----------- 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  157 avqkcstcrgrgmrimirqlAPGMVQQMQSvctdcngegevihekdrckecdgrkvckevKVLEVHVDKGMKHGQKITFS 236
Cdd:PRK10266 148 --------------------AFGMIEQEIP------------------------------KTLNVKIPAGVGNGQRIRLK 177
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086707  237 GEADQSPNTEP-GDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRhLVIKYPPGKvvEPGSIRVVR 315
Cdd:PRK10266 178 GQGTPGENGGPnGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGS--QAGQRLRVK 254
                        330       340
                 ....*....|....*....|....*
gi 47086707  316 GEGMPQYRnpfEKGDLFIKFDVQFP 340
Cdd:PRK10266 255 GKGLVSKK---QTGDLYAVLKIVMP 276
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
3-69 4.19e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 65.19  E-value: 4.19e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086707     3 NVADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDK-NPNAG-DKFKEISFAYEVLTNPEKKDLYDRY 69
Cdd:PTZ00341  569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKrSGNEGfHKFKKINEAYQILGDIDKKKMYNKF 637
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
10-65 4.45e-11

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 58.27  E-value: 4.45e-11
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47086707  10 YDLLGVSPSASENELKKAYRKLAKEYHPDK----NP-----NAGDKFKEISFAYEVLTNPEKKDL 65
Cdd:COG1076   7 FELLGLPPDADDAELKRAYRKLQREHHPDRlaagLPeeeqrLALQKAAAINEAYETLKDPRGIDL 71
djlA PRK09430
co-chaperone DjlA;
10-57 6.30e-10

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 59.44  E-value: 6.30e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 47086707   10 YDLLGVSPSASENELKKAYRKLAKEYHPDK------NPN----AGDKFKEISFAYEVL 57
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEmmemAKEKAQEIQAAYELI 260
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
9-67 3.95e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 48.49  E-value: 3.95e-06
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086707   9 LYDLLGVSP---SASENELKKAYRKLAKEYHPDKNPNAGDK-----FKEISFAYEVLTNPEKKDLYD 67
Cdd:COG5269  45 LYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKgcdefFKLIQKAREVLGDRKLRLQYD 111
PHA03102 PHA03102
Small T antigen; Reviewed
8-57 5.12e-06

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 46.20  E-value: 5.12e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 47086707    8 KLYDLLGVSPSASENE--LKKAYRKLAKEYHPDKNPNAgDKFKEISFAYEVL 57
Cdd:PHA03102   6 ELMDLLGLPRSAWGNLplMRKAYLRKCLEFHPDKGGDE-EKMKELNTLYKKF 56
PHA02624 PHA02624
large T antigen; Provisional
8-57 2.73e-05

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 46.52  E-value: 2.73e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 47086707    8 KLYDLLGVSPSASENE--LKKAYRKLAKEYHPDKnpnAGD--KFKEISFAYEVL 57
Cdd:PHA02624  12 ELMDLLGLPMAAWGNLplMRKAYLRKCKEYHPDK---GGDeeKMKRLNSLYKKL 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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