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Conserved domains on  [gi|47086777|ref|NP_997796|]
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dnaJ homolog subfamily C member 11a [Danio rerio]

Protein Classification

J domain-containing protein( domain architecture ID 10446376)

J domain-containing protein similar to Homo sapiens DnaJ homolog subfamily C member 11

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  35729039|9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ-like_C11_C pfam11875
DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, ...
 414-553 4.24e-67

DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, including DnaJ homolog subfamily C member 11 (DNAJC11) from mammals and Chaperone protein dnaJ 13 from Arabidopsis. DNAJC11 is a mitochondrial outer membrane protein involved in mitochondrial biogenesis and in the response to microenvironment changes and requirements. The J-domain is mediated its mitochondrial localization, while this domain is critical for protein-protein interactions.


:

Pssm-ID: 463378  Cd Length: 144  Bit Score: 213.99  E-value: 4.24e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777   414 PYVRAQQEQELEKQRESSASDVAKKKQEAEAAVLLMQESVRRIIEAEESKMGLIILNAWYGKFVTDN---SRKHERARVI 490
Cdd:pfam11875   1 PRKRRRKKRKLEELREKNKERIAEKRREAEAAIELMKETAERKRAAEEEKGGLVITKALYGNLPAFPdeeSDDDLEPEVI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   491 DVTVPLQCLVKDSKLMLTEA-SKAGLPGFYDPCVGEEKSLKVLYQFRGVMHQVLCGDTEALRIP 553
Cdd:pfam11875  81 DVTIPLQALVKDSQLILPEGvSKSGLPGFYDPCPGEPKSLRVRYTFRGQLHEVEVDDNEELRLP 144
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 14-79 3.08e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 98.70  E-value: 3.08e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47086777    14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG---DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
 
Name Accession Description Interval E-value
DnaJ-like_C11_C pfam11875
DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, ...
 414-553 4.24e-67

DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, including DnaJ homolog subfamily C member 11 (DNAJC11) from mammals and Chaperone protein dnaJ 13 from Arabidopsis. DNAJC11 is a mitochondrial outer membrane protein involved in mitochondrial biogenesis and in the response to microenvironment changes and requirements. The J-domain is mediated its mitochondrial localization, while this domain is critical for protein-protein interactions.


Pssm-ID: 463378  Cd Length: 144  Bit Score: 213.99  E-value: 4.24e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777   414 PYVRAQQEQELEKQRESSASDVAKKKQEAEAAVLLMQESVRRIIEAEESKMGLIILNAWYGKFVTDN---SRKHERARVI 490
Cdd:pfam11875   1 PRKRRRKKRKLEELREKNKERIAEKRREAEAAIELMKETAERKRAAEEEKGGLVITKALYGNLPAFPdeeSDDDLEPEVI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   491 DVTVPLQCLVKDSKLMLTEA-SKAGLPGFYDPCVGEEKSLKVLYQFRGVMHQVLCGDTEALRIP 553
Cdd:pfam11875  81 DVTIPLQALVKDSQLILPEGvSKSGLPGFYDPCPGEPKSLRVRYTFRGQLHEVEVDDNEELRLP 144
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 14-79 3.08e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 98.70  E-value: 3.08e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47086777    14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG---DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 14-87 1.66e-24

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 104.99  E-value: 1.66e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777    14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKE----AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 14-101 3.31e-24

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 98.24  E-value: 3.31e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777  14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEGWEV 93
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG---DPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATEL 77


                ....*...
gi 47086777  94 VERKRTPA 101
Cdd:COG0484  78 AESAAAEA 85
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 14-87 2.41e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 98.68  E-value: 2.41e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG---DKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFE 75
DnaJ smart00271
DnaJ molecular chaperone homology domain;
14-73 4.00e-20

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 83.82  E-value: 4.00e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777     14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPelKKQAEQLFNLVHQAYEVLSDPQ 73
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD--KEEAEEKFKEINEAYEVLSDPE 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 14-71 4.46e-20

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 83.75  E-value: 4.46e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777  14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkQAEQLFNLVHQAYEVLSD 71
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP---EAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
14-90 1.12e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 91.81  E-value: 1.12e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEG 90
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPD----AAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEG 78
 
Name Accession Description Interval E-value
DnaJ-like_C11_C pfam11875
DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, ...
 414-553 4.24e-67

DnaJ-like protein C11, C-terminal; This is the C-terminal domain found in DnaJ-like proteins, including DnaJ homolog subfamily C member 11 (DNAJC11) from mammals and Chaperone protein dnaJ 13 from Arabidopsis. DNAJC11 is a mitochondrial outer membrane protein involved in mitochondrial biogenesis and in the response to microenvironment changes and requirements. The J-domain is mediated its mitochondrial localization, while this domain is critical for protein-protein interactions.


Pssm-ID: 463378  Cd Length: 144  Bit Score: 213.99  E-value: 4.24e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777   414 PYVRAQQEQELEKQRESSASDVAKKKQEAEAAVLLMQESVRRIIEAEESKMGLIILNAWYGKFVTDN---SRKHERARVI 490
Cdd:pfam11875   1 PRKRRRKKRKLEELREKNKERIAEKRREAEAAIELMKETAERKRAAEEEKGGLVITKALYGNLPAFPdeeSDDDLEPEVI 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   491 DVTVPLQCLVKDSKLMLTEA-SKAGLPGFYDPCVGEEKSLKVLYQFRGVMHQVLCGDTEALRIP 553
Cdd:pfam11875  81 DVTIPLQALVKDSQLILPEGvSKSGLPGFYDPCPGEPKSLRVRYTFRGQLHEVEVDDNEELRLP 144
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 14-79 3.08e-25

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 98.70  E-value: 3.08e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47086777    14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYD 79
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG---DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 14-87 1.66e-24

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 104.99  E-value: 1.66e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777    14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKE----AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 14-101 3.31e-24

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 98.24  E-value: 3.31e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777  14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEGWEV 93
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG---DPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATEL 77


                ....*...
gi 47086777  94 VERKRTPA 101
Cdd:COG0484  78 AESAAAEA 85
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 14-87 2.41e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 98.68  E-value: 2.41e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:PRK10767   5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG---DKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFE 75
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 14-85 1.02e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 97.17  E-value: 1.02e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHrdPELKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKG 85
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRH--PENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
11-79 1.20e-21

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 89.39  E-value: 1.20e-21
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777  11 DNDDYYSLLNVRREATQEELKASYRRLCMLYHPDkhRDPELKKQAEQLFNLVHQAYEVLSDPQARAIYD 79
Cdd:COG2214   3 DLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPD--RGGELKALAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 14-91 4.72e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 94.83  E-value: 4.72e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDkhRDPElKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEGW 91
Cdd:PRK14294   5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPD--RNPG-DKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGF 79
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 14-90 3.21e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 92.91  E-value: 3.21e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEG 90
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPE----AEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSG 76
DnaJ smart00271
DnaJ molecular chaperone homology domain;
14-73 4.00e-20

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 83.82  E-value: 4.00e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777     14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPelKKQAEQLFNLVHQAYEVLSDPQ 73
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD--KEEAEEKFKEINEAYEVLSDPE 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 14-71 4.46e-20

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 83.75  E-value: 4.46e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777  14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkQAEQLFNLVHQAYEVLSD 71
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP---EAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
14-90 1.12e-19

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 91.81  E-value: 1.12e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEG 90
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPD----AAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEG 78
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 9-87 2.71e-19

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 90.27  E-value: 2.71e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777    9 EIDNDDYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPELKKQaeqlfnlVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:PTZ00037  24 EVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKE-------ISRAYEVLSDPEKRKIYDEYGEEGLE 95
PRK14293 PRK14293
molecular chaperone DnaJ;
14-86 3.50e-19

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 89.66  E-value: 3.50e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPelkkQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGL 86
Cdd:PRK14293   4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEP----GAEDRFKEINRAYEVLSDPETRARYDQFGEAGV 72
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 14-87 1.66e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 87.60  E-value: 1.66e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPD----AEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID 75
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 14-92 1.91e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 85.76  E-value: 1.91e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVeGWE 92
Cdd:PRK14299   5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPG----AEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASA-GWQ 78
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 14-90 2.13e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 87.16  E-value: 2.13e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKhrDPElKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEG 90
Cdd:PRK14277   6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDL--NPG-DKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGG 79
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 11-85 7.41e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 85.52  E-value: 7.41e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47086777   11 DNDDYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKG 85
Cdd:PRK14276   2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPG----AEEKYKEVQEAYETLSDPQKRAAYDQYGAAG 72
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 14-90 4.11e-17

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 85.25  E-value: 4.11e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086777    14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEG 90
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPD----AASIFAEINEANDVLSNPKKRANYDKYGHDGVDRED 75
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 14-86 5.69e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 82.97  E-value: 5.69e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHR-DPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGL 86
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPgDAE----AEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 14-82 5.72e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 82.79  E-value: 5.72e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYG 82
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEE----AQEKFKEISVAYEVLSDPEKRRIVDLGG 68
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 14-82 1.09e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 81.90  E-value: 1.09e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHrdPELKKQAEQLFNLVHQAYEVLSDPQARAIYDIYG 82
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLH--PGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG 70
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 14-90 1.20e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 81.71  E-value: 1.20e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRD-PElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEG 90
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDnPE----AEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG 78
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 14-86 3.94e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 80.62  E-value: 3.94e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGL 86
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD---NKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 15-87 9.86e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 78.88  E-value: 9.86e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47086777   15 YYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:PRK14286   6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG---NKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVN 75
PRK14289 PRK14289
molecular chaperone DnaJ;
14-86 1.34e-15

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 78.72  E-value: 1.34e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKhrDPElKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGL 86
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDK--NPG-DKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV 75
PRK14297 PRK14297
molecular chaperone DnaJ;
12-82 2.00e-15

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 78.29  E-value: 2.00e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47086777   12 NDDYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYG 82
Cdd:PRK14297   3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG---NKEAEEKFKEINEAYQVLSDPQKKAQYDQFG 70
PRK14288 PRK14288
molecular chaperone DnaJ;
15-90 3.95e-15

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 77.04  E-value: 3.95e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47086777   15 YYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLDVEG 90
Cdd:PRK14288   5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAG---DKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG 77
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 11-87 4.13e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 77.17  E-value: 4.13e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086777   11 DNDDYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:PRK14283   3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEG----AEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMD 75
PRK14280 PRK14280
molecular chaperone DnaJ;
14-85 5.05e-15

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 77.07  E-value: 5.05e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKG 85
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEG----ADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 14-82 8.09e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 76.08  E-value: 8.09e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPelkkQAEQLFNLVHQAYEVLSDPQARAIYDIYG 82
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEK----GAAEKFAQINEAYAVLSDAEKRAHYDRFG 67
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
13-77 1.71e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 68.67  E-value: 1.71e-14
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777  13 DDYYSLLNVRREATQEELKASYRRLCMLYHPDKH---RDPELKKQAEQLFNLVHQAYEVLSDPQARAI 77
Cdd:COG1076   4 DDAFELLGLPPDADDAELKRAYRKLQREHHPDRLaagLPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 14-76 1.01e-13

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 65.79  E-value: 1.01e-13
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47086777  14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKhrdPELKKQAEQLFNLVHQAYEVLSDPQARA 76
Cdd:COG5407   1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDR---NKGDPKAEERFKEINEAYELLSDAEKRA 60
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 14-82 3.43e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 71.19  E-value: 3.43e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYG 82
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPD----AEDKFKEVKEAYDTLSDPQKKAHYDQFG 69
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 14-82 3.93e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 71.18  E-value: 3.93e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYG 82
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKG---NKEAESIFKEATEAYEVLIDDNKRAQYDRFG 69
PRK10266 PRK10266
curved DNA-binding protein;
14-79 2.47e-12

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 67.92  E-value: 2.47e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYD 79
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPD----AEARFKEVAEAWEVLSDEQRRAEYD 66
PRK14295 PRK14295
molecular chaperone DnaJ;
12-79 6.38e-12

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 67.57  E-value: 6.38e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777   12 NDDYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYD 79
Cdd:PRK14295   8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKG---DAKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14279 PRK14279
molecular chaperone DnaJ;
12-79 3.43e-11

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 65.14  E-value: 3.43e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777   12 NDDYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDpelKKQAEQLFNLVHQAYEVLSDPQARAIYD 79
Cdd:PRK14279   8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPG---DPAAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 14-82 7.96e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 63.88  E-value: 7.96e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRdpelKKQAEQLFNLVHQAYEVLSDPQARAIYDIYG 82
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD----AKDAEKKFKEINAAYDVLKDEQKRAAYDRFG 68
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 14-87 2.48e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 62.27  E-value: 2.48e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47086777   14 DYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPElkkqAEQLFNLVHQAYEVLSDPQARAIYDIYGKKGLD 87
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPD----AHDKMVEINEAADVLLDKDKRKQYDQFGHAAFD 74
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 14-79 6.51e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 48.49  E-value: 6.51e-06
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47086777  14 DYYSLLNV---RREATQEELKASYRRLCMLYHPDKHRDPELKKQAEqLFNLVHQAYEVLSDPQARAIYD 79
Cdd:COG5269  44 DLYALLGLskyRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDE-FFKLIQKAREVLGDRKLRLQYD 111
hscB PRK03578
Fe-S protein assembly co-chaperone HscB;
12-78 4.11e-05

Fe-S protein assembly co-chaperone HscB;


Pssm-ID: 235133 [Multi-domain]  Cd Length: 176  Bit Score: 44.24  E-value: 4.11e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47086777   12 NDDYYSL--LNVRREATQEELKASYRRLCMLYHPDKHR---DPElKKQAEQLFNLVHQAYEVLSDPQARAIY 78
Cdd:PRK03578   5 KDDHFSLfgLPARFALDEAALDAAYRTVQAQVHPDRFAaagDAE-KRVAMQWATRANEAYQTLRDPLKRARY 75
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 9-86 2.61e-04

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 44.01  E-value: 2.61e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47086777     9 EIDNDDYYSLLNVRREATQEELKASYRRLCMLYHPDKHRDPELKKQaeqlFNLVHQAYEVLSDPQARAIYDIYGKKGL 86
Cdd:PTZ00341  569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHK----FKKINEAYQILGDIDKKKMYNKFGYDGI 642
djlA PRK09430
co-chaperone DjlA;
13-45 9.66e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 41.34  E-value: 9.66e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 47086777   13 DDYYSLLNVRREATQEELKASYRRLCMLYHPDK 45
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
PHA03102 PHA03102
Small T antigen; Reviewed
 17-59 1.85e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 39.27  E-value: 1.85e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 47086777   17 SLLNVRREA--TQEELKASYRRLCMLYHPDKHRDPELKKQAEQLF 59
Cdd:PHA03102   9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLY 53
hscB TIGR00714
Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K ...
 27-78 3.88e-03

Fe-S protein assembly co-chaperone HscB; This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock. [Protein fate, Protein folding and stabilization]


Pssm-ID: 211601 [Multi-domain]  Cd Length: 155  Bit Score: 38.33  E-value: 3.88e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 47086777    27 QEELKASYRRLCMLYHPDKHRDPELKKQAEQLFNLVHQAYEVLSDPQARAIY 78
Cdd:TIGR00714   5 QSRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56
hscB PRK01356
co-chaperone HscB; Provisional
 14-78 5.72e-03

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 37.93  E-value: 5.72e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47086777   14 DYYSLLNVRREAT--QEELKASYRRLCMLYHPDKHRDPELKKQAEQLFNLVHQAYEVLSDPQARAIY 78
Cdd:PRK01356   3 NYFQLLGLPQEYNidLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
PHA02624 PHA02624
large T antigen; Provisional
 17-100 9.98e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 38.81  E-value: 9.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47086777   17 SLLNVRREA--TQEELKASYRRLCMLYHPDKHRDPELKKQAEQLFN-LVHQAYEVLSDPQARAIYDI--YGKKGLDvEGW 91
Cdd:PHA02624  15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKkLQEGVKSARQSFGTQDSSEIptYGTPEWE-QWW 93


                 ....*....
gi 47086777   92 EVVERKRTP 100
Cdd:PHA02624  94 EEFNEKWDE 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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