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Conserved domains on  [gi|46430594|ref|NP_997450|]
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olfactory receptor family 4 subfamily P member 23 [Mus musculus]

Protein Classification

olfactory receptor family 4A protein( domain architecture ID 11610412)

olfactory receptor family 4A protein is an odorant receptor belonging to the G-protein coupled receptor 1 family

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
24-288 1.39e-137

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 389.65  E-value: 1.39e-137
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  24 CAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHF 103
Cdd:cd15939   3 CFVVFLLIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 104 FGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLK 183
Cdd:cd15939  83 FGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 184 LACTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVG 263
Cdd:cd15939 163 LACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVTTFP 242
                       250       260
                ....*....|....*....|....*
gi 46430594 264 DDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15939 243 IDKVVAVFYTIITPMLNPLIYTLRN 267
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
24-288 1.39e-137

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 389.65  E-value: 1.39e-137
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  24 CAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHF 103
Cdd:cd15939   3 CFVVFLLIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 104 FGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLK 183
Cdd:cd15939  83 FGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 184 LACTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVG 263
Cdd:cd15939 163 LACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVTTFP 242
                       250       260
                ....*....|....*....|....*
gi 46430594 264 DDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15939 243 IDKVVAVFYTIITPMLNPLIYTLRN 267
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
28-300 6.03e-39

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 138.40  E-value: 6.03e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594    28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLACT 187
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   188 DTRLMVI----VIITTTGVLSILTFLALVisyIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VGDS 261
Cdd:pfam13853 161 DIKVNNIyglfVVTSTFGIDSLLIVLSYG---LILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVhrFGHN 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 46430594   262 VGD--DKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKVWC 300
Cdd:pfam13853 238 VPPllQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRMLL 278
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
24-288 1.39e-137

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 389.65  E-value: 1.39e-137
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  24 CAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHF 103
Cdd:cd15939   3 CFVVFLLIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 104 FGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLK 183
Cdd:cd15939  83 FGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 184 LACTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVG 263
Cdd:cd15939 163 LACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVTTFP 242
                       250       260
                ....*....|....*....|....*
gi 46430594 264 DDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15939 243 IDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
26-288 4.03e-106

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 310.18  E-value: 4.03e-106
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd13954   5 VLFLLIYLLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd13954  85 GTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd13954 165 CSDTSLNELVIFILAGFVGLGSFlLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVrpSSSYSS 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd13954 245 DLDKVVSVFYTVVTPMLNPIIYSLRN 270
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
26-288 1.65e-104

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 306.05  E-value: 1.65e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15226   5 VFFSLFYVATVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15226  85 GSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVIKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGDD 265
Cdd:cd15226 165 CTDTYVLELMVVANSGLISLVCFLLLLISYIVILVTVRKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTFPVD 244
                       250       260
                ....*....|....*....|...
gi 46430594 266 KVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15226 245 KFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
26-288 1.27e-100

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 296.34  E-value: 1.27e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15230   5 VLFLLIYLITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15230  85 TTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15230 165 CSDTHINELVLFAFSGFIGLSTLLIiLISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLrpSSSYSL 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15230 245 DQDKVVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
26-295 3.39e-100

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 295.13  E-value: 3.39e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15225   5 VVFLLIYLVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15225  85 GTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VGDSV 262
Cdd:cd15225 165 CADTSLNEIAIFVASVLVILVPFlLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRpkSSYSP 244
                       250       260       270
                ....*....|....*....|....*....|...
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15225 245 ETDKLLSLFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
8-298 2.43e-97

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 288.88  E-value: 2.43e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   8 EFIFLGLFHNENVKEMCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCN 87
Cdd:cd15943   1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  88 TISYNGCIAQMFYAHFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCG 167
Cdd:cd15943  81 TISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCG 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 168 TNEIDHYFCDIFPLLKLACTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFM 246
Cdd:cd15943 161 SNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEiLVSYVYILSAILRIHSSEGRRKAFSTCASHLMAVTI 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 46430594 247 FFLPLIFTYV-PVGD-SVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKV 298
Cdd:cd15943 241 FYGTTLFMYLrPSSSySLDQDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRI 294
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
26-295 6.61e-92

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 274.48  E-value: 6.61e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIR-GSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15235   6 LLFLAMYLLTLLGNLLIVLLIRsDPRL-HTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAF 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15235  85 GNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKL 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIItTTGVLSILTFLALVIS--YIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGD 260
Cdd:cd15235 165 SCSDTSLNELLIF-TEGAVVVLGPFLLIVLsyARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFqpSSSY 243
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 261 SVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15235 244 SADKDRVATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
26-295 3.12e-91

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 272.55  E-value: 3.12e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRG-SHLSeQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15229   5 LVFLVIYLLTLLGNLLIMLVIRAdSHLH-TPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15229  84 AGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSILTFL-ALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDS 261
Cdd:cd15229 164 SCSDTFANKMVLLTSSVIFGLGSFLlTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLrpNSASS 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 262 VGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15229 244 SVLDRVFSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
26-288 6.49e-91

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 271.62  E-value: 6.49e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15940   5 MLFLVLYLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15940  85 CTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGDD 265
Cdd:cd15940 165 CTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVSLRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTSFSED 244
                       250       260
                ....*....|....*....|...
gi 46430594 266 KVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15940 245 KVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
26-288 2.61e-90

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 269.97  E-value: 2.61e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15936   5 LVFLLVYLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15936  85 GAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGDD 265
Cdd:cd15936 165 CTDTFLLELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFPMD 244
                       250       260
                ....*....|....*....|...
gi 46430594 266 KVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15936 245 KAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
9-292 7.19e-90

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 269.58  E-value: 7.19e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   9 FIFLGLFHNENVKEMCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNT 88
Cdd:cd15408   1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  89 ISYNGCIAQMFYAHFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGT 168
Cdd:cd15408  81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 169 NEIDHYFCDIFPLLKLACTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMF 247
Cdd:cd15408 161 NVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLViLISYTYILATILRMRSAEGRHKAFSTCASHLTAVTLF 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 46430594 248 FLPLIFTYVPVGD--SVGDDKVFALFYTMIAPLFNPLIYTLRNTDMK 292
Cdd:cd15408 241 YGSLAFMYLRPSSrySLDLDKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
26-288 3.43e-88

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 264.68  E-value: 3.43e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15937   5 VLFLLFYLIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15937  85 AAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGDD 265
Cdd:cd15937 165 CTNTYTVELLMFSNSGLVILLCFLLLLISYAFLLAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRSFPMD 244
                       250       260
                ....*....|....*....|...
gi 46430594 266 KVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15937 245 KVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
26-288 3.78e-88

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 264.48  E-value: 3.78e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15918   5 GLFLGMYLVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15918  85 DLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15918 165 CSDTHLNELVILVLGGLVGLVPFLCiLVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLspPSSHSA 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15918 245 SKDSVAAVMYTVVTPMLNPFIYSLRN 270
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
23-288 7.36e-88

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 263.54  E-value: 7.36e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  23 MCAVLFLLCYLAILCGN-LVVLITIRGSHLSeQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYA 101
Cdd:cd15227   2 LHFVLFLLIYLAALTGNlLIITVVTLDHHLH-TPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 102 HFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPL 181
Cdd:cd15227  81 IFFAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 182 LKLACTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PV 258
Cdd:cd15227 161 LKLSCSDTYLNEIGVLVLSVCLGLGCFvFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLkpPS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 46430594 259 GDSVGDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15227 241 DSPSLLDLLLSVFYSVVPPTLNPIIYSLRN 270
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
26-288 1.11e-87

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 263.19  E-value: 1.11e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15912   5 LLLLLTYLLTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15912  85 TTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLM-VIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15912 165 CSDTRLIeLLDFILASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVrpSQSSSL 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15912 245 DLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
26-297 1.26e-87

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 263.40  E-value: 1.26e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15419   5 LLFLVIYMVTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15419  85 TTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15419 165 CSDTFINELVMFVLCGLIIVSTILViLVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAqpGAVSSP 244
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15419 245 EQSKVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
9-298 3.95e-87

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 262.60  E-value: 3.95e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   9 FIFLGLFHNENVKEMCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNT 88
Cdd:cd15410   1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  89 ISYNGCIAQMFYAHFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGT 168
Cdd:cd15410  81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 169 NEIDHYFCDIFPLLKLACTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMF 247
Cdd:cd15410 161 NVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIiLTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAITIF 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 46430594 248 FLPLIFTY-VPV-GDSVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKV 298
Cdd:cd15410 241 HGTILFMYcRPSsSYSLDTDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKL 293
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
26-295 6.88e-87

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 261.43  E-value: 6.88e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15231   5 LIFLIIYLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15231  85 GTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFL-ALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15231 165 CSDTSLNEVLLLVASVFIGLTPFLfIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNrpSSGYSL 244
                       250       260       270
                ....*....|....*....|....*....|...
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15231 245 DKDTLISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
26-288 1.01e-86

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 260.67  E-value: 1.01e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15237   5 ILFLLIYLLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15237  85 VTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVI-ITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15237 165 CADTSLNEAVIfVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMrpHSTHSP 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15237 245 DQDKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
26-297 1.79e-86

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 260.42  E-value: 1.79e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGN--LVVLITIRgSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHF 103
Cdd:cd15409   5 LVFLAIYLITLVGNlgLIALIWKD-SHL-HTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 104 FGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLK 183
Cdd:cd15409  83 SATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 184 LACTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSV 262
Cdd:cd15409 163 ISCTDPSINELVLFIFSGSIQVFTILTvLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLY 242
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 46430594 263 GD--DKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15409 243 ALdqDMMDSLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
26-288 7.45e-86

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 258.54  E-value: 7.45e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRG-SHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15935   5 VLVLACYAAILLGNLLIVVTVHAdPHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15935  85 GGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVIKL 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGD 264
Cdd:cd15935 165 ACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSSV 244
                       250       260
                ....*....|....*....|....
gi 46430594 265 DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15935 245 DKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
26-297 9.42e-86

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 258.84  E-value: 9.42e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15416   5 VLFLVIYSVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15416  85 TVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15416 165 CSDIRLAKILPSISSGIIILVTVLTiIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVmpNSSYSM 244
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15416 245 DQNKVVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
26-297 4.32e-85

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 257.19  E-value: 4.32e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15417   5 VLFLGIYLVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15417  85 LTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPLLSLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15417 165 CSDTFISQVVLFLVAVLFGVFSVLVvLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLrpSSSHSQ 244
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15417 245 DQDKVASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
26-288 5.31e-85

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 256.46  E-value: 5.31e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNL-VVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15915   5 VLFLLLYLASLLGNGaILAVVIAEPRL-HSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15915  84 GSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSILTFL--ALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGD 260
Cdd:cd15915 164 ACGDTSLNLWLLNIVTGSIALGTFIltLLSYIYIISFLLLKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIrpSSGD 243
                       250       260
                ....*....|....*....|....*...
gi 46430594 261 SVGDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15915 244 SLEQDRIVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
27-298 8.15e-85

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 256.53  E-value: 8.15e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  27 LFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGA 106
Cdd:cd15406  15 LFLGIYVVTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 107 TEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLAC 186
Cdd:cd15406  95 AECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVINHYFCDILPLLKLSC 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 187 TDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSVG 263
Cdd:cd15406 175 SSTYINELLLFIVGGFNVLATTLAiLISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLkpSSSSSMT 254
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 264 DDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKV 298
Cdd:cd15406 255 QEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
26-297 8.20e-85

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 256.19  E-value: 8.20e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15415   5 MLFLLIYFITLLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15415  85 TTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGD--SV 262
Cdd:cd15415 165 CSDTHINELLLLTFSGVIAMSTLLTiIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSqySL 244
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15415 245 EQEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
26-295 8.65e-85

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 256.17  E-value: 8.65e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15429   5 VLFLVMYLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15429  85 GTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVVRLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIViITTTGVLSILT--FLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV-PVGD-S 261
Cdd:cd15429 165 CVDTSLNEVA-ILVSSVVVLLTpcFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMrPRSGsS 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 262 VGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15429 244 ALQEKMISLFYAVVTPMLNPLIYSLRNKEVKGAL 277
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
9-297 9.75e-85

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 256.59  E-value: 9.75e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   9 FIFLGLFHNENVKEMCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNT 88
Cdd:cd15945   1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  89 ISYNGCIAQMFYAHFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGT 168
Cdd:cd15945  81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 169 NEIDHYFCDIFPLLKLACTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMF 247
Cdd:cd15945 161 NTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAiIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAVGLF 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 46430594 248 FLPLIFTYV-PVGD-SVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15945 241 YGTLLFMYLrPSSSySLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
26-298 2.46e-84

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 255.43  E-value: 2.46e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15414   5 LLFLLVYLITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15414  85 AAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPLLSLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15414 165 CADTQINKWVLFIMAGALGVLSGLIiLVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVrpSSSSSL 244
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKV 298
Cdd:cd15414 245 DLDKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRT 280
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
26-288 1.97e-83

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 252.53  E-value: 1.97e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGN-LVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15431   5 VLLLIVYLVTLLGNgLIILLIRVDSQL-HTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFiIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15431  84 GITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPVL-TMPLHFCGPNVINHFFCEVQALLKL 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTtgvlSILTFLA-----LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV-PV 258
Cdd:cd15431 163 ACSDTSLNEILMFAT----SIFTLLLpfsfiLVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLrPQ 238
                       250       260       270
                ....*....|....*....|....*....|.
gi 46430594 259 GDSVGD-DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15431 239 SKSSSDqDKIISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
26-288 5.98e-83

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 251.25  E-value: 5.98e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15911   5 LLFLVIYIVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15911  85 ATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV-PVGDSVG 263
Cdd:cd15911 165 CSDTSLVELVTFILSSIVTLPPFlLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVvPSTNTSR 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 264 D-DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15911 245 DlNKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
26-297 1.19e-82

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 250.70  E-value: 1.19e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15413   5 GLFLVIYLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFI 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15413  85 ISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFL-ALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15413 165 CSDTHEKELIILIFAGFNLISSLLiVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLqpKSSHSL 244
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15413 245 DTDKMASVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
26-297 1.93e-82

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 250.31  E-value: 1.93e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15411   5 VLFLVIYVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15411  85 TTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGD--SV 262
Cdd:cd15411 165 CSDTHVNEMLIFILAGLTLVGSLLIiLVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSsySL 244
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15411 245 GQDKVASVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
26-288 4.64e-82

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 249.02  E-value: 4.64e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15938   5 ALFLLAYTMVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15938  85 AAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLALVisYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGDD 265
Cdd:cd15938 165 CTDTCVTELLMVSNSGLISTVCFVVLV--TSYTTILVTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTFPVD 242
                       250       260
                ....*....|....*....|...
gi 46430594 266 KVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15938 243 KHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
26-288 1.28e-81

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 247.94  E-value: 1.28e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15232   5 WLFLFLYAAALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15232  85 GSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15232 165 CSDTSLNEIMAFVADVFFGVGNFlLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIrpSSSYSP 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15232 245 EKDKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
27-295 7.18e-81

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 246.31  E-value: 7.18e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  27 LFLLCYLAILCGN--LVVLITiRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15421   6 LILLIFLVALTGNalLILLIW-LDSRL-HTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15421  84 GGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPALLKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVG--DS 261
Cdd:cd15421 164 SCADTSAYETVVYVSGVLFLLIPFsLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGsyHS 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 262 VGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15421 244 PEQDKVVSVFYTILTPMLNPLIYSLRNKEVLGAL 277
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
26-297 1.99e-79

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 242.69  E-value: 1.99e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15412   5 VLFLVIYLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15412  85 ITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGV-LSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15412 165 CSDTYVKETAMFIVAGFnLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLrpPSEESV 244
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15412 245 EQSKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
26-295 5.23e-78

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 238.77  E-value: 5.23e-78
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15420   5 GLFSLLYIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15420  85 HTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIItTTGVLSILT--FLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDS-- 261
Cdd:cd15420 165 CADTWINEILIF-AGCVFILLGpfSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSns 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 262 VGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15420 244 AEQEKILSLFYSLFNPMLNPLIYSLRNKQVKGAL 277
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
26-288 1.02e-77

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 237.91  E-value: 1.02e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNL-VVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15947   5 VVVLIFYLLTLLGNTaIILLSLLDPRL-HTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15947  84 GSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALIKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDT-----RLMVIVIITTTGVLSiltfLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVG 259
Cdd:cd15947 164 ACVDTtfnelELFVASVFFLLVPLS----LILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPP 239
                       250       260       270
                ....*....|....*....|....*....|.
gi 46430594 260 DSVGDD--KVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15947 240 SSYSQDqgKFISLFYTVVTPTLNPLIYTLRN 270
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
27-295 1.13e-77

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 238.12  E-value: 1.13e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  27 LFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLF-VQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15916   6 IFLIIYLLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLePGGKVISFGGCVAQLYFFHFLG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15916  86 STECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKLA 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGD 264
Cdd:cd15916 166 CADTTINELVIFASIGVVALGCFiLILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGSKEAL 245
                       250       260       270
                ....*....|....*....|....*....|.
gi 46430594 265 DKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15916 246 DGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
26-295 4.82e-77

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 236.56  E-value: 4.82e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15228   5 VLFLAFYLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15228  85 STECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGD 264
Cdd:cd15228 165 CADTSIAETVSFTNVGLVPLTCFlLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTPSPVL 244
                       250       260       270
                ....*....|....*....|....*....|.
gi 46430594 265 DKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15228 245 VTPVQIFNNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
26-295 8.11e-76

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 233.43  E-value: 8.11e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNL-VVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15434   5 VVVLIFYLLTLVGNTtIILVSCLDSRL-HTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15434  84 GGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPALIKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIViITTTGVLSILT--FLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSV 262
Cdd:cd15434 164 ACVDTTAYEAT-IFALGVFILLFplSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKNSV 242
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46430594 263 GDD--KVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15434 243 SQDqgKFLTLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
27-295 3.83e-75

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 231.70  E-value: 3.83e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  27 LFLLCYLAILCGN-LVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15234   6 LFLSMYLVTVLGNlLIILAVSSDSHL-HTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15234  85 GLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VGDSV 262
Cdd:cd15234 165 CSDTLINNILIYLATVIFGGIPLSGiIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISsaVTHSS 244
                       250       260       270
                ....*....|....*....|....*....|...
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15234 245 RKTAVASVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
23-288 6.75e-75

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 230.72  E-value: 6.75e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  23 MCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAH 102
Cdd:cd15914   2 LLFILLLLIYLFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 103 FFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLL 182
Cdd:cd15914  82 SLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 183 KLACTDTRLMVIVIITTTGVLSILTFL-ALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGD- 260
Cdd:cd15914 162 SLACTDTSLNVLVDFVIHAVIILLTFLlILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSKs 241
                       250       260
                ....*....|....*....|....*....
gi 46430594 261 -SVGDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15914 242 ySLDYDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
26-295 1.00e-74

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 230.38  E-value: 1.00e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIR-GSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15405   5 FLFLGIYVVTVVGNLGLITLIClNSHL-HTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15405  84 VISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLLQL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSIL-TFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGD--S 261
Cdd:cd15405 164 SCTSTYVNELVVFVVVGINIIVpSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSvgS 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 262 VGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15405 244 VNQGKVSSVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
23-295 5.51e-74

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 228.50  E-value: 5.51e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  23 MCAVLFLLCYLAILCGNLVVLITIR-GSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYA 101
Cdd:cd15236   2 VFFALFLAMYLTTVLGNLLIILLIRlDSHL-HTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 102 HFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPL 181
Cdd:cd15236  81 IFFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 182 LKLACTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PV 258
Cdd:cd15236 161 LKLSCSSTSLNELVIFTEGGLLFVLPLLLiLGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFfpSS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 46430594 259 GDSVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15236 241 NNSSDKDIVASVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
26-297 2.75e-73

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 226.92  E-value: 2.75e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNL-VVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15407   5 IIFTLIYLITLVGNLgMILLILLDSRL-HTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15407  84 ATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVLAL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRL--MVIVIITTTGVLSILTFLaLVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGD 260
Cdd:cd15407 164 SCSDIHIseIVLFFLASFNVFFALLVI-LISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLqpSSSH 242
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 46430594 261 SVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRK 297
Cdd:cd15407 243 SMDTDKMASVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
26-288 2.87e-72

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 224.17  E-value: 2.87e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLC---YLAILCGN-LVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYA 101
Cdd:cd15430   2 LLFVLClimYLVILLGNgVLIIITILDSHL-HTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 102 HFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPL 181
Cdd:cd15430  81 LAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 182 LKLACTDTRLMVIVI-ITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--V 258
Cdd:cd15430 161 LKLACVDISLNEIIMlVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKpkS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 46430594 259 GDSVGDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15430 241 KNAQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
26-288 1.49e-71

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 222.16  E-value: 1.49e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15224   5 LLFLIAYVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15224  85 CTECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRL-------MVIVIITTTGVLSILTFLALVisyiiiLSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV-- 256
Cdd:cd15224 165 CTDMSLaelvdfiLALIILLVPLLVTVASYICII------STVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYArp 238
                       250       260       270
                ....*....|....*....|....*....|..
gi 46430594 257 PVGDSVGDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15224 239 KAISSFDSNKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
9-298 3.17e-71

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 222.35  E-value: 3.17e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   9 FIFLGLFHNENVKEMCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNT 88
Cdd:cd15944   1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  89 ISYNGCIAQMFYAHFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGT 168
Cdd:cd15944  81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 169 NEIDHYFCDIFPLLKLACTDTRLMVIVIITTTGVLSILTFLA-LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMF 247
Cdd:cd15944 161 NIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIiLISYLFILVAILRMRSAEGRRKAFSTCASHFTGVTLF 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 46430594 248 FLPLIFTYVPVGD--SVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKV 298
Cdd:cd15944 241 YGTVIFMYLRPTSvySLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKL 293
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
26-295 6.76e-71

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 220.76  E-value: 6.76e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15424   5 VVILIIYLLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15424  85 STECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLmVIVIITTTGVLSILTFLA--LVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTY-VPVGDSV 262
Cdd:cd15424 165 CADTHI-TEAIVFGAGVLILLVPLSviLTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYmRPRSGST 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 263 GD-DKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15424 244 PDrDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
28-295 2.03e-69

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 216.92  E-value: 2.03e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:cd15942   7 FLVVYLLTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLACT 187
Cdd:cd15942  87 ECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAMLKLACA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 188 DTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGDDK 266
Cdd:cd15942 167 DTAFNELVTFIDIGLVAMTCFlLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQDPLDG 246
                       250       260
                ....*....|....*....|....*....
gi 46430594 267 VFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15942 247 VVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
26-298 5.34e-69

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 216.19  E-value: 5.34e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15418   6 VVFLLSYILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15418  86 YSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLA 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRL--MVIVIITTTGVLSIlTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDS-- 261
Cdd:cd15418 166 CDDTRVyeLILYFILGFNVIAP-TALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSSSht 244
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 46430594 262 VGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKV 298
Cdd:cd15418 245 PDRDKVVALFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
26-288 1.32e-68

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 214.65  E-value: 1.32e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15946   5 AVFLLIYLSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15946  85 ITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLM-VIVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVGD 264
Cdd:cd15946 165 CADTSLNeMVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGSNYSP 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 265 --DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15946 245 erDKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
26-288 2.35e-68

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 214.10  E-value: 2.35e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15913   5 SFFSVIYILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15913  85 TTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPLLALS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTFL-ALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDSV 262
Cdd:cd15913 165 CVPAPGTELICYTLSSLIIFGTFLfILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVspGSGNST 244
                       250       260
                ....*....|....*....|....*.
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15913 245 GMQKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
26-295 7.45e-68

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 212.79  E-value: 7.45e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRG-SHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQC-NTISYNGCIAQMFYAHF 103
Cdd:cd15941   5 LLFLLIYLLTVLGNLLILLTIGSdPHLHGLPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSgRTISFEGCVVQLYAFHF 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 104 FGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLK 183
Cdd:cd15941  85 LASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPPVLK 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 184 LACTDTRLMVIVIITTTGVLSILTFLALVI-SYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSV 262
Cdd:cd15941 165 LACADTTINELVILANIGIVAAGCFLLIVIsYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSSSQ 244
                       250       260       270
                ....*....|....*....|....*....|...
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15941 245 AGAGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
26-295 1.54e-67

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 212.34  E-value: 1.54e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15432   5 VVFLIFYILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15432  85 STECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDT-----RLMVIVIItttgVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PV 258
Cdd:cd15432 165 CVDTtaneaELFVISVL----LLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLqpPS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 46430594 259 GDSVGDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15432 241 NSSHDRGKMVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
26-295 8.03e-64

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 202.72  E-value: 8.03e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15233   5 VTFLLAYIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15233  85 GADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPLFQLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVG--DSV 262
Cdd:cd15233 165 CSSTHLNELLLFVFAFFMALAPCvLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGsvYSS 244
                       250       260       270
                ....*....|....*....|....*....|...
gi 46430594 263 GDDKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15233 245 DKDKVIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
26-295 8.48e-64

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 202.71  E-value: 8.48e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGN-LVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15433   5 VVVLIFYLLTLVGNtIIILLSVRDLRL-HTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLAL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15433  84 GSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSILTF-LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVG 263
Cdd:cd15433 164 ACGDDETTEVQMFVARVVILLLPAaLILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHRYS 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 264 DD--KVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15433 244 QAhgKFVSLFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
26-295 1.61e-60

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 194.24  E-value: 1.61e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGN-LVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15428   5 ILFLIIYLMTVLGNlLLVLLVIVDSHL-HTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15428  84 GITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALLKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVI-ITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVPVGDSVG 263
Cdd:cd15428 164 ASTDTHQAEMAMfIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKSSTS 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 264 D--DKVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15428 244 KeyDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
26-295 1.63e-55

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 181.34  E-value: 1.63e-55
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15223   5 LPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFT 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLA 185
Cdd:cd15223  85 AMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALVSLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 186 CTDTR----LMVIVIITTTGVLSILTFLALVisyIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VG 259
Cdd:cd15223 165 CGDTTinsiYGLAVAWLIVGSDIILIFFSYA---LILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTyrFG 241
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 46430594 260 DSVGDD--KVFALFYTMIAPLFNPLIYTLRNTDMKNAM 295
Cdd:cd15223 242 KTIPPDvhVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
25-287 5.90e-51

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 169.48  E-value: 5.90e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15952   4 GFPFCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15952  84 TGMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRlmvIVIITTTGVLSILTF---LALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VG 259
Cdd:cd15952 164 ACASIR---INIIYGLFAISVLVLdviLIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLThrFG 240
                       250       260       270
                ....*....|....*....|....*....|
gi 46430594 260 DSVGD--DKVFALFYTMIAPLFNPLIYTLR 287
Cdd:cd15952 241 HNIPRyiHILLANLYVVLPPMLNPVIYGVR 270
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
25-288 8.12e-50

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 166.31  E-value: 8.12e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15917   4 SIPFCAMYLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15917  84 TAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVI----VIITTTGVLSILTFLALVisyIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--V 258
Cdd:cd15917 164 ACGDTRVNSIyglfVALLIVGFDLLFIALSYV---LILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLThrF 240
                       250       260       270
                ....*....|....*....|....*....|..
gi 46430594 259 GDSVGD--DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15917 241 GHHVPPhvHILLANLYLLLPPMLNPIVYGVRT 272
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
25-287 8.65e-50

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 166.44  E-value: 8.65e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15950   4 AIPFCSMYVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15950  84 TAVESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVI--VIITTTGVLSILTFLAlVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTY------- 255
Cdd:cd15950 164 ACADPRPSSLysITGSTLVVGTDSAFIA-VSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIytqrfgq 242
                       250       260       270
                ....*....|....*....|....*....|...
gi 46430594 256 -VPVGDSVgddkVFALFYTMIAPLFNPLIYTLR 287
Cdd:cd15950 243 gVPPHTQV----LLADLYLLVPPMLNPIIYGMR 271
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
28-287 3.37e-48

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 162.46  E-value: 3.37e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:cd15221   7 FCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLACT 187
Cdd:cd15221  87 ESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIARLACA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 188 DTRLMVIVIITTTGVLSIL-TFLALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFT--------YVPV 258
Cdd:cd15221 167 DITVNIWYGLTVALLTVGLdVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSflthrfgrHIPR 246
                       250       260
                ....*....|....*....|....*....
gi 46430594 259 GDSVgddkVFALFYTMIAPLFNPLIYTLR 287
Cdd:cd15221 247 HVHI----LLANLYVLVPPMLNPIVYGVK 271
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
25-287 1.19e-44

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 153.04  E-value: 1.19e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15222   4 SIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIHTF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYM--ITMSRQVCYMLVIASAIGAFIHSLvhVFIIIRLPFCGTNEIDHYFCDIFPLL 182
Cdd:cd15222  84 SFMESSVLLAMAFDRFVAICNPLRYAsiLTNSRIAKIGLAIVLRSVLLLLPL--PFLLKRLPFCHSNVLSHSYCLHQDVM 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 183 KLACTDTRLMVI----VIITTTGVLSILTFLALVisyIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLI------ 252
Cdd:cd15222 162 KLACSDTRVNSIyglfVVLSTMGLDSLLILLSYV---LILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIglsmvh 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 46430594 253 --------FTYVpvgdsvgddkVFALFYTMIAPLFNPLIYTLR 287
Cdd:cd15222 239 rfgkhaspLVHV----------LMANVYLLVPPVLNPIIYSVK 271
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
25-288 2.18e-43

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 149.80  E-value: 2.18e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15951   4 SIPFCIMYAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15951  84 STMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLM----VIVIITTTGVLSILTFLALVisyIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--V 258
Cdd:cd15951 164 ACADTRVSraygLSVAFLVGGLDVIFIAVSYI---QILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLThrF 240
                       250       260       270
                ....*....|....*....|....*....|..
gi 46430594 259 GDSVGD--DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15951 241 GHNVPPhvHILIANVYLLVPPMLNPIIYGVRT 272
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
28-288 2.23e-42

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 147.02  E-value: 2.23e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:cd15953   7 FCLMYIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLACT 187
Cdd:cd15953  87 ESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVVKLACG 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 188 DTR------LMVIVIITTTGVLSILTFLALVisyiiILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VG 259
Cdd:cd15953 167 DTTinriygLVVALLVVGLDLLLIALSYALI-----IRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLThrFG 241
                       250       260       270
                ....*....|....*....|....*....|.
gi 46430594 260 DSVGD--DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15953 242 QGIAPhiHIILANLYLLVPPMLNPIIYGVKT 272
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
28-300 6.03e-39

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 138.40  E-value: 6.03e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594    28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLACT 187
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   188 DTRLMVI----VIITTTGVLSILTFLALVisyIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VGDS 261
Cdd:pfam13853 161 DIKVNNIyglfVVTSTFGIDSLLIVLSYG---LILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVhrFGHN 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 46430594   262 VGD--DKVFALFYTMIAPLFNPLIYTLRNTDMKNAMRKVWC 300
Cdd:pfam13853 238 VPPllQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRMLL 278
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
25-292 3.06e-38

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 136.57  E-value: 3.06e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd15948   5 SIPFCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSF 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd15948  85 SIMESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAVVKL 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSILTFL-ALVISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYV--PVGDS 261
Cdd:cd15948 165 ACGDTRFNNIYGIAVALFIVGLDLMfIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTmhRFARH 244
                       250       260       270
                ....*....|....*....|....*....|...
gi 46430594 262 VGDDK--VFALFYTMIAPLFNPLIYTLRNTDMK 292
Cdd:cd15948 245 VAPHVhiLLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
7-292 3.51e-37

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 134.13  E-value: 3.51e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   7 TEFIFLGLFHNENVKEMCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQC 86
Cdd:cd15949   2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  87 NTISYNGCIAQMFYAHFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFC 166
Cdd:cd15949  82 NEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWY 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 167 GTNEIDHYFCDIFPLLKLACTDTRLMVIVIITTTGVLSILTFLALVISYIIIL-SILRTRSSEGRRKALSTCGSHITVVF 245
Cdd:cd15949 162 RTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILrVVQRLATSEARLKTFGTCVSHVCAIL 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 46430594 246 MFFLPLIFTYV--PVGDSVGDDK--VFALFYTMIAPLFNPLIYTLRNTDMK 292
Cdd:cd15949 242 AFYVPIAVSSLihRFGQNVPPPThiLLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
28-287 9.18e-37

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 132.68  E-value: 9.18e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:cd15956   7 FCFIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHAFSAM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLACT 187
Cdd:cd15956  87 ESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAVVKLACG 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 188 DTR------LMVIVIITTTGVLSILTFLALVisyiiILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--VG 259
Cdd:cd15956 167 ATTvdslygLALALFIGGGDVLFIAYSYGLI-----VKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLMhrFG 241
                       250       260       270
                ....*....|....*....|....*....|
gi 46430594 260 DSVGDDK--VFALFYTMIAPLFNPLIYTLR 287
Cdd:cd15956 242 HSVPSAAhvLLSNLYLLLPPALNPIVYGIR 271
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
28-287 2.76e-32

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 120.70  E-value: 2.76e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:cd15954   7 FCFMYIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLACT 187
Cdd:cd15954  87 ESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLACA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 188 DTRLMVIVIITTTGVLSILTFLAL-VISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP---VGDSVG 263
Cdd:cd15954 167 NIRVDAIYGLMVALLIGGFDILCIsVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAhrfGGHHIT 246
                       250       260
                ....*....|....*....|....*.
gi 46430594 264 DDK--VFALFYTMIAPLFNPLIYTLR 287
Cdd:cd15954 247 PHIhiIMANLYLLLPPMMNPIVYGVK 272
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
28-288 2.03e-29

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 112.94  E-value: 2.03e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  28 FLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGAT 107
Cdd:cd15955   7 FCIMFLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAF 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 108 EIFILVAMAYDRYVAICRPLYYMITMSRQVCY-MLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKLAC 186
Cdd:cd15955  87 ESGILLAMALDRYVAICHPLRHSSILTPQVLLgIGVLVVVRAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKLAA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 187 TDTR------LMVIVIITTTGVLSILTFLALVisyiiILSILRTRSSEGRRKALSTCGSHITVVFMFFLPLIFTYVP--V 258
Cdd:cd15955 167 DDVRvnkiygLFVAFSILGFDIIFITTSYALI-----FRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAhrF 241
                       250       260       270
                ....*....|....*....|....*....|..
gi 46430594 259 GDSVGD--DKVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd15955 242 GHHVAPyvHILLSNLYLLVPPVLNPIVYGVKT 273
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
38-284 1.50e-22

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 94.29  E-value: 1.50e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594    38 GNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCN-TISYNGCIAQMFYAHFFGATEIFILVAMA 116
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDwPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   117 YDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRlpfCGTNEIDHYFCDIFPLLKLACTDTRLMVIVI 196
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWT---LTVPEGNVTVCFIDFPEDLSKPVSYTLLISV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594   197 ITTTGVLSILTFLALVISYIIILSILRTRSSEG---RRKALSTCGSHITVVFMFFLPLIFTYV------PVGDSVGDDKV 267
Cdd:pfam00001 158 LGFLLPLLVILVCYTLIIRTLRKSASKQKSSERtqrRRKALKTLAVVVVVFILCWLPYHIVNLldslalDCELSRLLDKA 237
                         250
                  ....*....|....*....
gi 46430594   268 FAL--FYTMIAPLFNPLIY 284
Cdd:pfam00001 238 LSVtlWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
25-288 6.75e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 81.57  E-value: 6.75e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd00637   2 AVLYILIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFPLLKL 184
Cdd:cd00637  82 LLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDLTLSKAY 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 185 ACTDTRLMVIVIITTTGVLSILTFLAL----VISYIIILSILRTRSSEGRRKALSTCGSHITVVFMFFLP-----LIFTY 255
Cdd:cd00637 162 TIFLFVLLFLLPLLVIIVCYVRIFRKLrrhrRRIRSSSSNSSRRRRRRRERKVTKTLLIVVVVFLLCWLPyfillLLDVF 241
                       250       260       270
                ....*....|....*....|....*....|....
gi 46430594 256 VPVGDSVGDD-KVFALFYTMIAPLFNPLIYTLRN 288
Cdd:cd00637 242 GPDPSPLPRIlYFLALLLAYLNSAINPIIYAFFN 275
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
25-159 1.29e-11

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 63.79  E-value: 1.29e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILcGNLVVLITI--RGSHLSeqPMYYFLTYLSFMD--VCFTStVAPKLIIDLFVQ-------CNTISYng 93
Cdd:cd15196   5 AVLATILVLALF-GNSCVLLVLyrRRRKLS--RMHLFILHLSVADllVALFN-VLPQLIWDITYRfyggdllCRLVKY-- 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 46430594  94 ciAQMF--YAhffgatEIFILVAMAYDRYVAICRPLYYMiTMSRQVCYMLVIASAIGAFIHSLVHVFI 159
Cdd:cd15196  79 --LQVVgmYA------SSYVLVATAIDRYIAICHPLSSH-RWTSRRVHLMVAIAWVLSLLLSIPQLFI 137
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
26-212 8.44e-07

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 49.55  E-value: 8.44e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAIlCGNLVVLITIRGSHLSeQPMYYFLTYLSFMDVCFTSTVAPKLIID-LFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd14978   6 VLPVICIFGI-IGNILNLVVLTRKSMR-SSTNVYLAALAVSDILVLLSALPLFLLPyIADYSSSFLSYFYAYFLPYIYPL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 105 G----ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLVHVFIIIRLPFCGTNEIDHYFCDIFP 180
Cdd:cd14978  84 AntfqTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYVIPTL 163
                       170       180       190
                ....*....|....*....|....*....|..
gi 46430594 181 LLKLACTdtrLMVIVIITTTGVLSILTFLALV 212
Cdd:cd14978 164 LRQNETY---LLKYYFWLYAIFVVLLPFILLL 192
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
25-159 1.23e-06

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 49.04  E-value: 1.23e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAiLCGNLVVLITIRGSHLSEQPMYYFLTYLSFMD-VCFTSTVAPKLIIDLFVQ-------CNTISYNGCIA 96
Cdd:cd15387   5 TVLALILFLA-LTGNICVLLAIHTTRHKHSRMYFFMKHLSIADlVVAVFQVLPQLIWDITFRfygpdflCRLVKYLQVVG 83
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 46430594  97 qmfyahFFGATeiFILVAMAYDRYVAICRPLYymiTMSRQVCYMLVIASAIGAFIHSLVHVFI 159
Cdd:cd15387  84 ------MFAST--YMLLLMSIDRCLAICQPLR---SLHRRSDRVYVLFSWLLSLVFSIPQVHI 135
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
25-159 1.96e-05

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 45.44  E-value: 1.96e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLcYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFT-STVAPKLIIDLFVQ-------CNTISYNGCIA 96
Cdd:cd14986   5 AVLGVL-FVFTLVGNGLVILVLRRKRKKRSRVNIFILNLAIADLVVAfFTVLTQIIWEATGEwvagdvlCRIVKYLQVVG 83
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 46430594  97 qmfyahFFGATeiFILVAMAYDRYVAICRPLYYMitMSRQVCYMLVIASAIGAFIHSLVHVFI 159
Cdd:cd14986  84 ------LFAST--YILVSMSLDRYQAIVKPMSSL--KPRKRARLMIVVAWVLSFLFSIPQLVI 136
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
38-159 1.98e-05

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 45.56  E-value: 1.98e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  38 GNLVVLITI--RGSHLSEqpMYYFLTYLSFMDVCFTS-TVAPKLIIDLFVQ-------CNTISYngciaqMFYAHFFGAT 107
Cdd:cd15386  17 GNLAVLLAMyrMRRKMSR--MHLFVLHLALTDLVVALfQVLPQLIWEITYRfqgpdllCRAVKY------LQVLSMFAST 88
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 46430594 108 eiFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAfIHSLVHVFI 159
Cdd:cd15386  89 --YMLIMMTVDRYIAVCHPLRTLQQPSRQAYLMIGATWLLSC-ILSLPQVFI 137
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
25-151 2.50e-05

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 44.86  E-value: 2.50e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd14967   3 AVFLSLIILVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLC 82
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQ-VCYMLVIASAIGAFI 151
Cdd:cd14967  83 CTASILNLCAISLDRYLAITRPLRYRQLMTKKrALIMIAAVWVYSLLI 130
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
22-295 4.89e-05

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 44.12  E-value: 4.89e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  22 EMCAVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYA 101
Cdd:cd14969   1 YVLAVYLSLIGVLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 102 HFFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLvhvfiiirlPFCGTN----EIDHYFCD 177
Cdd:cd14969  81 TFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRALILIAFIWLYGLFWALP---------PLFGWSsyvpEGGGTSCS 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 178 IFPLLKLACTDTRLMVI---------VIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKALSTcgsHITVVFMFF 248
Cdd:cd14969 152 VDWYSKDPNSLSYIVSLfvfcfflplAIIIFCYYKIYRTLRKMSKRAARRKNSAITKRTKKAEKKVAK---MVLVMIVAF 228
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 46430594 249 LPLIFTYVPVG--DSVGDDKVFALFYTMIAPLF-------NPLIYTLRNTDMKNAM 295
Cdd:cd14969 229 LIAWTPYAVVSlyVSFGGESTIPPLLATIPALFaksstiyNPIIYVFMNKQFRRAL 284
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
38-254 5.63e-05

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 43.77  E-value: 5.63e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  38 GNLVVLITIRGS--HLSEQPMYYFLTYLSFMDVCFTSTVAPkliIDLFVQCNTISYNG----CIAQMFYAHFFGATEIFI 111
Cdd:cd14981  17 GNLLALIVLARSskSHKWSVFYRLVAGLAITDLLGILLTSP---VVLAVYASNFEWDGgqplCDYFGFMMSFFGLSSLLI 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594 112 LVAMAYDRYVAICRPLYYMITMS-RQVCYMLVIASAIGAFIHSlvhvfiiirLPFCGTNEIDHYFCDIFPLLKLACTDTR 190
Cdd:cd14981  94 VCAMAVERFLAITHPFFYNSHVKkRRARLMLGAVWAFALLIAS---------LPLLGLGSYVLQYPGTWCFLDFYSKNTG 164
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 46430594 191 LMV---------IVIITTTGVLSILTFLALVISYIIILSILRTRSSEGRRKAlstcgSHI-TVVFMFFLPLIFT 254
Cdd:cd14981 165 DAAyaylysilgLLILLVTLLCNLLVIITLLRMRRRKKRHRRSRRSARRQKR-----NEIqMVVLLLAITVVFS 233
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
26-151 1.16e-04

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 42.97  E-value: 1.16e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAP-KLIIDLF-------VQCNTISYNGCIAQ 97
Cdd:cd14993   5 VLYVVVFLLALVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPlTLLENVYrpwvfgeVLCKAVPYLQGVSV 84
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 46430594  98 mfyahffgATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFI 151
Cdd:cd14993  85 --------SASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAII 130
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
25-159 1.49e-04

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 42.89  E-value: 1.49e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILcGNLVVLITIRGSHLSEQPMYYFLTYLSFMD--VCFTStVAPKLIIDLfvqcnTISYNG------CIA 96
Cdd:cd15385   5 AVLAVIFAVAVI-GNSSVLLALYKTKKKASRMHLFIKHLSLADlvVAFFQ-VLPQLCWDI-----TYRFYGpdflcrIVK 77
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 46430594  97 QMFYAHFFGATeiFILVAMAYDRYVAICRPLyYMITMSRQVCYMLVIASAIGAFIHSLVHVFI 159
Cdd:cd15385  78 HLQVLGMFAST--YMLVMMTADRYIAICHPL-KTLQQPTKRSYLMIGSAWALSFILSTPQYFI 137
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
31-159 2.85e-04

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 41.91  E-value: 2.85e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  31 CYLAILCGNLVVLIT-IRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIdlfvQCNTISYNG----CIAQMFYAHFFG 105
Cdd:cd15382  10 LFLIAAVGNLTVLLIlLRNRRRKRSRVNILLMHLAIADLLVTFIMMPLEIG----WAATVAWLAgdflCRLMLFFRAFGL 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMiTMSRQVCYMLvIASAIGAFIHSLVHVFI 159
Cdd:cd15382  86 YLSSFVLVCISLDRYFAILKPLRLS-DARRRGRIML-AVAWVISFLCSIPQSFI 137
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
29-142 3.74e-04

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 41.67  E-value: 3.74e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  29 LLCYLAI-LCGNLVVLITI-RGSHLSEQPmYYFLTYLSFMDVCFTSTVAPKLIIDLfVQCNTISYN--GCIAQMFYAHFF 104
Cdd:cd15005   7 LGLILCVsLAGNLLFSVLIvRDRSLHRAP-YYFLLDLCLADGLRSLACFPFVMASV-RHGSGWIYGalSCKVIAFLAVLF 84
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 46430594 105 GATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLV 142
Cdd:cd15005  85 CFHSAFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVI 122
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
26-154 3.83e-04

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 41.26  E-value: 3.83e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLcylaILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCF-TSTVAPKLIIDLFVQ-------CNTISYngciaq 97
Cdd:cd15197   9 VLFVF----IVVGNSSVLFALWMRKAKKSRMNFFITQLAIADLCVgLINVLTDIIWRITVEwragdfaCKVIRY------ 78
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 46430594  98 MFYAHFFGATeiFILVAMAYDRYVAICRPLYYMitMSRQVCYMLVIASAIGAFIHSL 154
Cdd:cd15197  79 LQVVVTYAST--YVLVALSIDRYDAICHPMNFS--QSGRQARVLICVAWILSALFSI 131
7tmA_VA_opsin cd15082
non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane ...
19-127 4.42e-04

non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The vertebrate ancient (VA) opsin photopigments were originally identified in salmon and they appear to have diverged early in the evolution of vertebrate opsins. VA opsins are localized in the inner retina and the brain in teleosts. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extraretinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity, and body color change. The VA opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320210 [Multi-domain]  Cd Length: 291  Bit Score: 41.32  E-value: 4.42e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  19 NVKEMCAVLFLLCYLAILCGNLVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVApklIIDLFVQCNTISYNG---CI 95
Cdd:cd15082  12 NFTVLAALMFVVTSLSLAENFAVMLVTFRFKQL-RQPLNYIIVNLSVADFLVSLTGG---TISFLTNARGYFFLGvwaCV 87
                        90       100       110
                ....*....|....*....|....*....|..
gi 46430594  96 AQMFYAHFFGATEIFILVAMAYDRYVAICRPL 127
Cdd:cd15082  88 LEGFAVTFFGIVALWSLAVLAFERFFVICRPL 119
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
109-155 4.96e-04

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 41.00  E-value: 4.96e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 46430594 109 IFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSLV 155
Cdd:cd15055  88 IFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSV 134
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
37-144 7.61e-04

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 40.38  E-value: 7.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  37 CGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVA-PKLIIDLFVQCNTISYNGCIAQMFYAHFFGATEIFILVAM 115
Cdd:cd15337  16 IGNLLVIYLFSKTKSLRTPSNMFIINLAISDFGFSAVNGfPLKTISSFNKKWIWGKVACELYGFAGGIFGFMSITTLAAI 95
                        90       100       110
                ....*....|....*....|....*....|
gi 46430594 116 AYDRYVAICRPLYYMITMS-RQVCYMLVIA 144
Cdd:cd15337  96 SIDRYLVIAKPLEAMKKMTfKRAFIMIIII 125
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
26-154 8.39e-04

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 40.39  E-value: 8.39e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15083   5 IFILIIGLIGVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFSGGLFG 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAFIHSL 154
Cdd:cd15083  85 IMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVL 133
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
26-144 1.23e-03

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 39.84  E-value: 1.23e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLC---YLAILCGNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAH 102
Cdd:cd15318   2 VIYLACaigMLIIVLGNLFVVVTVSHFKALHTPTNFLLLSLALADMLLGLTVLPFSTIRSVESCWYFGDSFCRLHTCLDT 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 46430594 103 FFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIA 144
Cdd:cd15318  82 LFCLTSIFHLCFISIDRHCAICDPLLYPSKFTIRVACIFIAA 123
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
26-127 1.52e-03

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 39.45  E-value: 1.52e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  26 VLFLLCYLAILCGNLVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15085   6 LMFLNATFSIFNNVLVIAVTLKNPQL-RNPINIFILNLSFSDLMMALCGTTIVTVTNYEGYFYLGDAFCIFQGFAVNYFG 84
                        90       100
                ....*....|....*....|..
gi 46430594 106 ATEIFILVAMAYDRYVAICRPL 127
Cdd:cd15085  85 IVSLWSLTLLAYERYNVVCKPM 106
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
25-150 3.10e-03

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 38.41  E-value: 3.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITI--RGSHLseQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAH 102
Cdd:cd15074   4 GIYLTVIGILSTLGNGTVLFVLyrRRSKL--KPAELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGFCGF 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 46430594 103 FFGATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIASAIGAF 150
Cdd:cd15074  82 LFGCCSINTLTAISIYRYLKICHPPYGPKLSRRHVCIVIVAIWLYALF 129
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
38-155 3.46e-03

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 38.55  E-value: 3.46e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  38 GNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFGATEIFILVAMAY 117
Cdd:cd15336  17 GNALVIYAFCRSKKLRTPANYFIINLAVSDFLMSLTQSPIFFVNSLHKRWIFGEKGCELYAFCGALFGITSMITLLAISL 96
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 46430594 118 DRYVAICRPLYYMITMSRQVCyMLVIAsaiGAFIHSLV 155
Cdd:cd15336  97 DRYLVITKPLASIRWVSKKRA-MIIIL---LVWLYSLA 130
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
28-145 4.07e-03

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 38.20  E-value: 4.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  28 FLLCYLAILCGNLVVLITIrgSHLSE--QPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCNTISYNGCIAQMFYAHFFG 105
Cdd:cd15317   7 LVLAMLITVSGNLVVIISI--SHFKQlhSPTNMLVLSLATADFLLGLCVMPFSMIRTVETCWYFGDLFCKFHTGLDLLLC 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 46430594 106 ATEIFILVAMAYDRYVAICRPLYYMITMSRQVCYMLVIAS 145
Cdd:cd15317  85 TTSIFHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIG 124
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
25-127 5.65e-03

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 37.66  E-value: 5.65e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  25 AVLFLLCYLAILCGNLVVLITIRGSHLSEQPMYYFLTyLSFMDVCFTSTVaPKLIIDLFVQCNTISYNGCIAQMFYAHFF 104
Cdd:cd14970   5 AVYSVVCVVGLTGNSLVIYVILRYSKMKTVTNIYILN-LAVADELFLLGL-PFLATSYLLGYWPFGEVMCKIVLSVDAYN 82
                        90       100
                ....*....|....*....|...
gi 46430594 105 GATEIFILVAMAYDRYVAICRPL 127
Cdd:cd14970  83 MFTSIFCLTVMSVDRYLAVVHPV 105
7tmA_Parapinopsin cd15075
non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled ...
29-127 7.10e-03

non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the non-visual pineal pigment, parapinopsin, which is a member of the class A of the seven transmembrane G protein-coupled receptors. Parapinopsin serves as a UV-sensitive pigment for the wavelength discrimination in the pineal-related organs of lower vertebrates such as reptiles, amphibians, and fish. Although parapinopsin is phylogenetically related to vertebrate visual pigments such as rhodopsin, which releases its retinal chromophore and bleaches, the parapinopsin photoproduct is stable and does not bleach. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells.


Pssm-ID: 320203 [Multi-domain]  Cd Length: 279  Bit Score: 37.45  E-value: 7.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  29 LLCYLAILCGNLVVLITIRGSHLsEQPMYYFLTYLSFMDVCFTSTVAPkliidLFVQCNTISY-----NGCIAQMFYAHF 103
Cdd:cd15075   9 VFSIASVVLNATVIIVTLRHKQL-RQPLNYALVNLAVADLGTTVFGGL-----LSVVTNAVGYfnlgrVGCVLEGFAVAF 82
                        90       100
                ....*....|....*....|....
gi 46430594 104 FGATEIFILVAMAYDRYVAICRPL 127
Cdd:cd15075  83 FGIAALCTVAVIAVDRLFVVCKPL 106
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
38-129 8.37e-03

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 37.22  E-value: 8.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46430594  38 GNLVVLITIRGSHLSEQPMYYFLTYLSFMDVCFTSTVAPKLIIDLFVQCntISYNGCIAQMFYAHFFGATEIFILVAMAY 117
Cdd:cd15069  17 GNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITISLGFC--TDFHSCLFLACFVLVLTQSSIFSLLAVAV 94
                        90
                ....*....|..
gi 46430594 118 DRYVAICRPLYY 129
Cdd:cd15069  95 DRYLAIKVPLRY 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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