NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|46409376|ref|NP_997256|]
View 

protein GPR15LG precursor [Homo sapiens]

Protein Classification

protein GPR15L( domain architecture ID 11239451)

protein GPR15L is a DUF4725 domain-containing protein that acts as chemotactic factor which mediates lymphocytes recruitment to epithelia through binding and activation of the G-protein coupled receptor GPR15

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
GPR15L pfam15854
G-protein coupled receptor ligand 15; GPR15 is an orphan G protein-coupled receptor (GPCR) ...
17-80 4.88e-29

G-protein coupled receptor ligand 15; GPR15 is an orphan G protein-coupled receptor (GPCR) that is found in lymphocytes. It functions as a co-receptor of simian immunodeficiency virus and HIV-2 and plays a role in the trafficking of T cells to the lamina propria in the colon and to the skin. An activating ligand named GPR15L is shown to bind GPR15 and attract GPR15-expressing T cells including lymphocytes in colon-draining lymph nodes and thymic precursors of dermal epithelial T cell. This 9kDa CC-motif containing cationic polypeptide has been previously described as the 57 amino acid antimicrobial peptide AP-57, and as a Sushi Containing Domain-2 (SUSD2)-binding factor (CSBF), capable of inhibiting the growth of intestinal epithelial cancer cell lines. The chemokine is expressed by epithelial cells in gastrointestinal and genitourinary mucosae and in the skin. In humans GPR15L, is encoded by the gene C10ORF99 and has some features similar to the CC family of chemokines. However, it lacks significant homology to classic CC and CXC chemokines, yet shares many features with them, including a cationic domain predicted to comprise two disulfide bonds and a highly conserved GPCR-activating terminal peptide. Furthermore, the activating peptides of CC chemokines are typically located at the N-terminus, while that of GPR15L is C-terminal, a feature that it shares with some other GPCR ligands like chemerin and apela.


:

Pssm-ID: 464908  Cd Length: 80  Bit Score: 98.70  E-value: 4.88e-29
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 46409376   17 FSIFSTEGKRRPAKAWSGRRTRLCCHRVPSPNSTNLKGHHVRLCKPCKLEPEPRLWVVPGALPQ 80
Cdd:pfam15854 17 LSIFSAEGRRLPAKFWRPRKPRPCCHRVPRPNPMNLKGHHTRLCRPCKLKPEPRLWVVPGALPQ 80
 
Name Accession Description Interval E-value
GPR15L pfam15854
G-protein coupled receptor ligand 15; GPR15 is an orphan G protein-coupled receptor (GPCR) ...
17-80 4.88e-29

G-protein coupled receptor ligand 15; GPR15 is an orphan G protein-coupled receptor (GPCR) that is found in lymphocytes. It functions as a co-receptor of simian immunodeficiency virus and HIV-2 and plays a role in the trafficking of T cells to the lamina propria in the colon and to the skin. An activating ligand named GPR15L is shown to bind GPR15 and attract GPR15-expressing T cells including lymphocytes in colon-draining lymph nodes and thymic precursors of dermal epithelial T cell. This 9kDa CC-motif containing cationic polypeptide has been previously described as the 57 amino acid antimicrobial peptide AP-57, and as a Sushi Containing Domain-2 (SUSD2)-binding factor (CSBF), capable of inhibiting the growth of intestinal epithelial cancer cell lines. The chemokine is expressed by epithelial cells in gastrointestinal and genitourinary mucosae and in the skin. In humans GPR15L, is encoded by the gene C10ORF99 and has some features similar to the CC family of chemokines. However, it lacks significant homology to classic CC and CXC chemokines, yet shares many features with them, including a cationic domain predicted to comprise two disulfide bonds and a highly conserved GPCR-activating terminal peptide. Furthermore, the activating peptides of CC chemokines are typically located at the N-terminus, while that of GPR15L is C-terminal, a feature that it shares with some other GPCR ligands like chemerin and apela.


Pssm-ID: 464908  Cd Length: 80  Bit Score: 98.70  E-value: 4.88e-29
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 46409376   17 FSIFSTEGKRRPAKAWSGRRTRLCCHRVPSPNSTNLKGHHVRLCKPCKLEPEPRLWVVPGALPQ 80
Cdd:pfam15854 17 LSIFSAEGRRLPAKFWRPRKPRPCCHRVPRPNPMNLKGHHTRLCRPCKLKPEPRLWVVPGALPQ 80
 
Name Accession Description Interval E-value
GPR15L pfam15854
G-protein coupled receptor ligand 15; GPR15 is an orphan G protein-coupled receptor (GPCR) ...
17-80 4.88e-29

G-protein coupled receptor ligand 15; GPR15 is an orphan G protein-coupled receptor (GPCR) that is found in lymphocytes. It functions as a co-receptor of simian immunodeficiency virus and HIV-2 and plays a role in the trafficking of T cells to the lamina propria in the colon and to the skin. An activating ligand named GPR15L is shown to bind GPR15 and attract GPR15-expressing T cells including lymphocytes in colon-draining lymph nodes and thymic precursors of dermal epithelial T cell. This 9kDa CC-motif containing cationic polypeptide has been previously described as the 57 amino acid antimicrobial peptide AP-57, and as a Sushi Containing Domain-2 (SUSD2)-binding factor (CSBF), capable of inhibiting the growth of intestinal epithelial cancer cell lines. The chemokine is expressed by epithelial cells in gastrointestinal and genitourinary mucosae and in the skin. In humans GPR15L, is encoded by the gene C10ORF99 and has some features similar to the CC family of chemokines. However, it lacks significant homology to classic CC and CXC chemokines, yet shares many features with them, including a cationic domain predicted to comprise two disulfide bonds and a highly conserved GPCR-activating terminal peptide. Furthermore, the activating peptides of CC chemokines are typically located at the N-terminus, while that of GPR15L is C-terminal, a feature that it shares with some other GPCR ligands like chemerin and apela.


Pssm-ID: 464908  Cd Length: 80  Bit Score: 98.70  E-value: 4.88e-29
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 46409376   17 FSIFSTEGKRRPAKAWSGRRTRLCCHRVPSPNSTNLKGHHVRLCKPCKLEPEPRLWVVPGALPQ 80
Cdd:pfam15854 17 LSIFSAEGRRLPAKFWRPRKPRPCCHRVPRPNPMNLKGHHTRLCRPCKLKPEPRLWVVPGALPQ 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH