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Conserved domains on  [gi|42571003|ref|NP_973575|]
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signal transducer/transcription protein, putative (DUF1685) [Arabidopsis thaliana]

Protein Classification

DUF1685 domain-containing protein( domain architecture ID 10546229)

DUF1685 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1685 pfam07939
Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic ...
 98-161 1.89e-24

Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long.


:

Pssm-ID: 462321  Cd Length: 59  Bit Score: 90.75  E-value: 1.89e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42571003    98 LTDDDLEELKGCLDLGFGFSY-DEIPELCNTLPALELCYSMSqkflddKQQNHHKSQEEDDSSPP 161
Cdd:pfam07939   1 LTDDDLDELKGCIELGFGFDSsDEDPRLCDTLPALDLYYAVN------RQLSDHLSRTSSSSSSS 59
 
Name Accession Description Interval E-value
DUF1685 pfam07939
Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic ...
 98-161 1.89e-24

Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long.


Pssm-ID: 462321  Cd Length: 59  Bit Score: 90.75  E-value: 1.89e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42571003    98 LTDDDLEELKGCLDLGFGFSY-DEIPELCNTLPALELCYSMSqkflddKQQNHHKSQEEDDSSPP 161
Cdd:pfam07939   1 LTDDDLDELKGCIELGFGFDSsDEDPRLCDTLPALDLYYAVN------RQLSDHLSRTSSSSSSS 59
 
Name Accession Description Interval E-value
DUF1685 pfam07939
Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic ...
 98-161 1.89e-24

Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long.


Pssm-ID: 462321  Cd Length: 59  Bit Score: 90.75  E-value: 1.89e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42571003    98 LTDDDLEELKGCLDLGFGFSY-DEIPELCNTLPALELCYSMSqkflddKQQNHHKSQEEDDSSPP 161
Cdd:pfam07939   1 LTDDDLDELKGCIELGFGFDSsDEDPRLCDTLPALDLYYAVN------RQLSDHLSRTSSSSSSS 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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