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Conserved domains on  [gi|41054469|ref|NP_955951|]
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protein-associating with the carboxyl-terminal domain of ezrin [Danio rerio]

Protein Classification

protein kinase family protein( domain architecture ID 229378)

protein kinase family protein may catalyze the transfer of the gamma-phosphoryl group from ATP to substrates such as serine/threonine and/or tyrosine residues on proteins, or may be a pseudokinase

CATH:  1.10.510.10
PubMed:  16244704
SCOP:  4003661

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
32-247 1.57e-38

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd14011:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 287  Bit Score: 144.77  E-value: 1.57e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  32 RDGKPASVFVHKQDNEDK------------VNKAAKHLKTLRHPCLLRFLSCSV-QDGGIHLVTEPV------------- 85
Cdd:cd14011  19 STKQEVSVFVFEKKQLEEyskrdreqilelLKRGVKQLTRLRHPRILTVQHPLEeSRESLAFATEPVfaslanvlgerdn 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  86 --QPLKRLLDN-LSAEEICAGLYDLLQALVFLHDRGKSSHNNVCISSVFVGEDGHWKLGGMETVCKFSEATPE---FLKS 159
Cdd:cd14011  99 mpSPPPELQDYkLYDVEIKYGLLQISEALSFLHNDVKLVHGNICPESVVINSNGEWKLAGFDFCISSEQATDQfpyFREY 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469 160 IQNVREnSAIPPEEKLEGFKTLPEKHAHSRDAFSFGVMVEALL----PLLT---------------GHVSDDLLVSLKNM 220
Cdd:cd14011 179 DPNLPP-LAQPNLNYLAPEYILSKTCDPASDMFSLGVLIYAIYnkgkPLFDcvnnllsykknsnqlRQLSLSLLEKVPEE 257
                       250       260       270
                ....*....|....*....|....*....|
gi 41054469 221 LQA---SLLTPDHKSRPSLSTLLTHNFFRN 247
Cdd:cd14011 258 LRDhvkTLLNVTPEVRPDAEQLSKIPFFDD 287
 
Name Accession Description Interval E-value
PK_SCY1_like cd14011
Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein ...
32-247 1.57e-38

Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This subfamily is composed of the catalytically inactive kinases with similarity to yeast Scy1. It includes four mammalian proteins called SCY1-like protein 1 (SCYL1), SCYL2, SCYL3, as well as Testis-EXpressed protein 14 (TEX14). SCYL1 binds to and co-localizes with the membrane trafficking coatomer I (COPI) complex, and regulates COPI-mediated vesicle trafficking. Null mutations in the SCYL1 gene are responsible for the pathology in mdf (muscle-deficient) mice which display progressive motor neuropathy. SCYL2, also called coated vesicle-associated kinase of 104 kDa (CVAK104), is involved in the trafficking of clathrin-coated vesicles. It also binds the HIV-1 accessory protein Vpu and acts as a regulatory factor that promotes the dephosphorylation of Vpu, facilitating the restriction of HIV-1 release. SCYL3, also called ezrin-binding protein PACE-1, may be involved in regulating cell adhesion and migration. TEX14 is required for spermatogenesis and male fertility. It localizes to kinetochores (KT) during mitosis and is a target of the mitotic kinase PLK1. It regulates the maturation of the outer KT and the KT-microtubule attachment. The SCY1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270913 [Multi-domain]  Cd Length: 287  Bit Score: 144.77  E-value: 1.57e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  32 RDGKPASVFVHKQDNEDK------------VNKAAKHLKTLRHPCLLRFLSCSV-QDGGIHLVTEPV------------- 85
Cdd:cd14011  19 STKQEVSVFVFEKKQLEEyskrdreqilelLKRGVKQLTRLRHPRILTVQHPLEeSRESLAFATEPVfaslanvlgerdn 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  86 --QPLKRLLDN-LSAEEICAGLYDLLQALVFLHDRGKSSHNNVCISSVFVGEDGHWKLGGMETVCKFSEATPE---FLKS 159
Cdd:cd14011  99 mpSPPPELQDYkLYDVEIKYGLLQISEALSFLHNDVKLVHGNICPESVVINSNGEWKLAGFDFCISSEQATDQfpyFREY 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469 160 IQNVREnSAIPPEEKLEGFKTLPEKHAHSRDAFSFGVMVEALL----PLLT---------------GHVSDDLLVSLKNM 220
Cdd:cd14011 179 DPNLPP-LAQPNLNYLAPEYILSKTCDPASDMFSLGVLIYAIYnkgkPLFDcvnnllsykknsnqlRQLSLSLLEKVPEE 257
                       250       260       270
                ....*....|....*....|....*....|
gi 41054469 221 LQA---SLLTPDHKSRPSLSTLLTHNFFRN 247
Cdd:cd14011 258 LRDhvkTLLNVTPEVRPDAEQLSKIPFFDD 287
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
41-245 6.25e-08

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 54.46  E-value: 6.25e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469     41 VHKQDNEDKVNKAAKH---LKTLRHPCLLRFLSCSVQDGGIHLVTEPVQ--PLKRLLDN---LSAEEICAGLYDLLQALV 112
Cdd:smart00220  32 IKKKKIKKDRERILREikiLKKLKHPNIVRLYDVFEDEDKLYLVMEYCEggDLFDLLKKrgrLSEDEARFYLRQILSALE 111
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469    113 FLHDRG------K------SSHNNVCIS----SVFVGEDGHwklggMETVCkfseATPEFLksiqnvrensaiPPEEkLE 176
Cdd:smart00220 112 YLHSKGivhrdlKpenillDEDGHVKLAdfglARQLDPGEK-----LTTFV----GTPEYM------------APEV-LL 169
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469    177 GfktlpEKHAHSRDAFSFGVMVEALL---PLLTGHVSDDLLV-------------------SLKNMLQaSLLTPDHKSRP 234
Cdd:smart00220 170 G-----KGYGKAVDIWSLGVILYELLtgkPPFPGDDQLLELFkkigkpkppfpppewdispEAKDLIR-KLLVKDPEKRL 243
                          250
                   ....*....|.
gi 41054469    235 SLSTLLTHNFF 245
Cdd:smart00220 244 TAEEALQHPFF 254
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
54-140 2.84e-07

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 53.86  E-value: 2.84e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  54 AKHLKTLRHPCLLRFLSCSVQDGGIHLVTEPV--QPLKRLLDN---LSAEEICAGLYDLLQALVFLHDRG------KSSH 122
Cdd:COG0515  58 ARALARLNHPNIVRVYDVGEEDGRPYLVMEYVegESLADLLRRrgpLPPAEALRILAQLAEALAAAHAAGivhrdiKPAN 137
                        90
                ....*....|....*...
gi 41054469 123 nnvcissVFVGEDGHWKL 140
Cdd:COG0515 138 -------ILLTPDGRVKL 148
 
Name Accession Description Interval E-value
PK_SCY1_like cd14011
Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein ...
32-247 1.57e-38

Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This subfamily is composed of the catalytically inactive kinases with similarity to yeast Scy1. It includes four mammalian proteins called SCY1-like protein 1 (SCYL1), SCYL2, SCYL3, as well as Testis-EXpressed protein 14 (TEX14). SCYL1 binds to and co-localizes with the membrane trafficking coatomer I (COPI) complex, and regulates COPI-mediated vesicle trafficking. Null mutations in the SCYL1 gene are responsible for the pathology in mdf (muscle-deficient) mice which display progressive motor neuropathy. SCYL2, also called coated vesicle-associated kinase of 104 kDa (CVAK104), is involved in the trafficking of clathrin-coated vesicles. It also binds the HIV-1 accessory protein Vpu and acts as a regulatory factor that promotes the dephosphorylation of Vpu, facilitating the restriction of HIV-1 release. SCYL3, also called ezrin-binding protein PACE-1, may be involved in regulating cell adhesion and migration. TEX14 is required for spermatogenesis and male fertility. It localizes to kinetochores (KT) during mitosis and is a target of the mitotic kinase PLK1. It regulates the maturation of the outer KT and the KT-microtubule attachment. The SCY1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270913 [Multi-domain]  Cd Length: 287  Bit Score: 144.77  E-value: 1.57e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  32 RDGKPASVFVHKQDNEDK------------VNKAAKHLKTLRHPCLLRFLSCSV-QDGGIHLVTEPV------------- 85
Cdd:cd14011  19 STKQEVSVFVFEKKQLEEyskrdreqilelLKRGVKQLTRLRHPRILTVQHPLEeSRESLAFATEPVfaslanvlgerdn 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  86 --QPLKRLLDN-LSAEEICAGLYDLLQALVFLHDRGKSSHNNVCISSVFVGEDGHWKLGGMETVCKFSEATPE---FLKS 159
Cdd:cd14011  99 mpSPPPELQDYkLYDVEIKYGLLQISEALSFLHNDVKLVHGNICPESVVINSNGEWKLAGFDFCISSEQATDQfpyFREY 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469 160 IQNVREnSAIPPEEKLEGFKTLPEKHAHSRDAFSFGVMVEALL----PLLT---------------GHVSDDLLVSLKNM 220
Cdd:cd14011 179 DPNLPP-LAQPNLNYLAPEYILSKTCDPASDMFSLGVLIYAIYnkgkPLFDcvnnllsykknsnqlRQLSLSLLEKVPEE 257
                       250       260       270
                ....*....|....*....|....*....|
gi 41054469 221 LQA---SLLTPDHKSRPSLSTLLTHNFFRN 247
Cdd:cd14011 258 LRDhvkTLLNVTPEVRPDAEQLSKIPFFDD 287
PKc cd00180
Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group ...
40-242 9.14e-15

Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. PKs make up a large family of serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and more than 500 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase.


Pssm-ID: 270622 [Multi-domain]  Cd Length: 215  Bit Score: 73.84  E-value: 9.14e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  40 FVHKQDNEDKVNKA---AKHLKTLRHPCLLRFLSCSVQDGGIHLVTEPVQP--LKRLLDN----LSAEEICAGLYDLLQA 110
Cdd:cd00180  25 VIPKEKLKKLLEELlreIEILKKLNHPNIVKLYDVFETENFLYLVMEYCEGgsLKDLLKEnkgpLSEEEALSILRQLLSA 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469 111 LVFLHDRGkSSHNNVCISSVFVGEDGHWKLG--GMetvCKFSEaTPEFLKSIQNVRENSAIPPEEKLEGFKTLPEKhahs 188
Cdd:cd00180 105 LEYLHSNG-IIHRDLKPENILLDSDGTVKLAdfGL---AKDLD-SDDSLLKTTGGTTPPYYAPPELLGGRYYGPKV---- 175
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
gi 41054469 189 rDAFSFGVMveallpLLTghvsddlLVSLKNMLQaSLLTPDHKSRPSLSTLLTH 242
Cdd:cd00180 176 -DIWSLGVI------LYE-------LEELKDLIR-RMLQYDPKKRPSAKELLEH 214
PKc_Myt1 cd14050
Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze ...
40-242 4.85e-13

Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Myt1 is a cytoplasmic cell cycle checkpoint kinase that can keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of N-terminal thr (T14) and tyr (Y15) residues, leading to the delay of meiosis I entry. Meiotic progression is ensured by a two-step inhibition and downregulation of Myt1 by CDK1/XRINGO and p90Rsk during oocyte maturation. In addition, Myt1 targets cyclin B1/B2 and is essential for Golgi and ER assembly during telophase. In Drosophila, Myt1 may be a downstream target of Notch during eye development. The Myt1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270952 [Multi-domain]  Cd Length: 249  Bit Score: 69.64  E-value: 4.85e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  40 FVHKQDNEDKVNKAAKHLKTLRHPCLLRFLSCSVQDGGIHLVTEPVQP-LKRLL---DNLSAEEICAGLYDLLQALVFLH 115
Cdd:cd14050  38 FRGEKDRKRKLEEVERHEKLGEHPNCVRFIKAWEEKGILYIQTELCDTsLQQYCeetHSLPESEVWNILLDLLKGLKHLH 117
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469 116 DRGkSSHNNVCISSVFVGEDGHWKLG--------GMETVCKFSEATPEFLKSiqnvrensaippeEKLEGFKTlpeKHAh 187
Cdd:cd14050 118 DHG-LIHLDIKPANIFLSKDGVCKLGdfglvvelDKEDIHDAQEGDPRYMAP-------------ELLQGSFT---KAA- 179
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 41054469 188 srDAFSFGV-MVEAL----LP--------LLTGHV----SDDLLVSLKNMLQaSLLTPDHKSRPSLSTLLTH 242
Cdd:cd14050 180 --DIFSLGItILELAcnleLPsggdgwhqLRQGYLpeefTAGLSPELRSIIK-LMMDPDPERRPTAEDLLAL 248
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
41-245 6.25e-08

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 54.46  E-value: 6.25e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469     41 VHKQDNEDKVNKAAKH---LKTLRHPCLLRFLSCSVQDGGIHLVTEPVQ--PLKRLLDN---LSAEEICAGLYDLLQALV 112
Cdd:smart00220  32 IKKKKIKKDRERILREikiLKKLKHPNIVRLYDVFEDEDKLYLVMEYCEggDLFDLLKKrgrLSEDEARFYLRQILSALE 111
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469    113 FLHDRG------K------SSHNNVCIS----SVFVGEDGHwklggMETVCkfseATPEFLksiqnvrensaiPPEEkLE 176
Cdd:smart00220 112 YLHSKGivhrdlKpenillDEDGHVKLAdfglARQLDPGEK-----LTTFV----GTPEYM------------APEV-LL 169
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469    177 GfktlpEKHAHSRDAFSFGVMVEALL---PLLTGHVSDDLLV-------------------SLKNMLQaSLLTPDHKSRP 234
Cdd:smart00220 170 G-----KGYGKAVDIWSLGVILYELLtgkPPFPGDDQLLELFkkigkpkppfpppewdispEAKDLIR-KLLVKDPEKRL 243
                          250
                   ....*....|.
gi 41054469    235 SLSTLLTHNFF 245
Cdd:smart00220 244 TAEEALQHPFF 254
STKc_PLK cd14099
Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the ...
58-245 2.22e-07

Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. PLKs derive their names from homology to polo, a kinase first identified in Drosophila. There are five mammalian PLKs (PLK1-5) from distinct genes. There is good evidence that PLK1 may function as an oncogene while PLK2-5 have tumor suppressive properties. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. PLK2 functions in G1 progression, S-phase arrest, and centriole duplication. PLK3 regulates angiogenesis and responses to DNA damage. PLK4 is required for late mitotic progression, cell survival, and embryonic development. PLK5 was first identified as a pseudogene containing a stop codon within the kinase domain, however, both murine and human genes encode expressed proteins. PLK5 functions in cell cycle arrest.


Pssm-ID: 271001 [Multi-domain]  Cd Length: 258  Bit Score: 52.94  E-value: 2.22e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  58 KTLRHPCLLRFLSCSVQDGGIHLVTE--PVQPLKRLLDN---LSAEEICAGLYDLLQALVFLHDRgKSSHNNVCISSVFV 132
Cdd:cd14099  56 RSLKHPNIVKFHDCFEDEENVYILLElcSNGSLMELLKRrkaLTEPEVRYFMRQILSGVKYLHSN-RIIHRDLKLGNLFL 134
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469 133 GEDGHWKLG--GMETVCKFSE-------ATPEFlksiqnvrensaIPPE--EKLEGfktlpekHAHSRDAFSFGVMVEAL 201
Cdd:cd14099 135 DENMNVKIGdfGLAARLEYDGerkktlcGTPNY------------IAPEvlEKKKG-------HSFEVDIWSLGVILYTL 195
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 41054469 202 L----PLLTGHVSD--------------DLLVSLK-NMLQASLLTPDHKSRPSLSTLLTHNFF 245
Cdd:cd14099 196 LvgkpPFETSDVKEtykrikkneysfpsHLSISDEaKDLIRSMLQPDPTKRPSLDEILSHPFF 258
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
54-140 2.84e-07

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 53.86  E-value: 2.84e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  54 AKHLKTLRHPCLLRFLSCSVQDGGIHLVTEPV--QPLKRLLDN---LSAEEICAGLYDLLQALVFLHDRG------KSSH 122
Cdd:COG0515  58 ARALARLNHPNIVRVYDVGEEDGRPYLVMEYVegESLADLLRRrgpLPPAEALRILAQLAEALAAAHAAGivhrdiKPAN 137
                        90
                ....*....|....*...
gi 41054469 123 nnvcissVFVGEDGHWKL 140
Cdd:COG0515 138 -------ILLTPDGRVKL 148
PKc_Wee1_like cd13997
Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the ...
62-242 2.24e-05

Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity kinase Myt1, the protein tyrosine kinase Wee1, and similar proteins. These proteins are cell cycle checkpoint kinases that are involved in the regulation of cyclin-dependent kinase CDK1, the master engine for mitosis. CDK1 is kept inactivated through phosphorylation of N-terminal thr (T14 by Myt1) and tyr (Y15 by Myt1 and Wee1) residues. Mitosis progression is ensured through activation of CDK1 by dephoshorylation and inactivation of Myt1/Wee1. The Wee1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270899 [Multi-domain]  Cd Length: 252  Bit Score: 46.61  E-value: 2.24e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  62 HPCLLRFLSCSVQDGGIHLVTEPVQP--LKRLLDNLSAE------EICAGLYDLLQALVFLHDRGkSSHNNVCISSVFVG 133
Cdd:cd13997  59 HPNIVRYYSSWEEGGHLYIQMELCENgsLQDALEELSPIsklseaEVWDLLLQVALGLAFIHSKG-IVHLDIKPDNIFIS 137
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469 134 EDGHWKLG--GMETVC----KFSEATPEFLksiqnvrensaipPEEKLEGFKTlpekHAHSRDAFSFGVMV--------- 198
Cdd:cd13997 138 NKGTCKIGdfGLATRLetsgDVEEGDSRYL-------------APELLNENYT----HLPKADIFSLGVTVyeaatgepl 200
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 41054469 199 -----------EALLPLLTGHV-SDDLLVSLKNMLQaslltPDHKSRPSLSTLLTH 242
Cdd:cd13997 201 prngqqwqqlrQGKLPLPPGLVlSQELTRLLKVMLD-----PDPTRRPTADQLLAH 251
PKc_TESK cd14155
Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; ...
57-118 4.60e-04

Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TESK proteins phosphorylate cofilin and induce actin cytoskeletal reorganization. In the Drosphila eye, TESK is required for epithelial cell organization. Mammals contain two TESK proteins, TESK1 and TESK2, which are highly expressed in testis and play roles in spermatogenesis. TESK1 is found in testicular germ cells while TESK2 is expressed mainly in nongerminal Sertoli cells. TESK1 is stimulated by integrin-mediated signaling pathways. It regulates cell spreading and focal adhesion formation. The TESK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271057 [Multi-domain]  Cd Length: 253  Bit Score: 42.85  E-value: 4.60e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 41054469  57 LKTLRHPCLLRFLSCSVQDGGIHLVTEPVQ--PLKRLLDN---LSAEEICAGLYDLLQALVFLHDRG 118
Cdd:cd14155  42 MNRLSHPNILRFMGVCVHQGQLHALTEYINggNLEQLLDSnepLSWTVRVKLALDIARGLSYLHSKG 108
PK_GC-A_B cd14042
Pseudokinase domain of the membrane Guanylate Cyclase receptors, GC-A and GC-B; The ...
41-140 4.35e-03

Pseudokinase domain of the membrane Guanylate Cyclase receptors, GC-A and GC-B; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity and/or ATP binding. GC-A binds and is activated by the atrial and B-type natriuretic peptides, ANP and BNP, which are important in blood pressure regulation and cardiac pathophysiology. GC-B binds the C-type natriuretic peptide, CNP, which is a potent vasorelaxant and functions in vascular remodeling and bone growth regulation. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC-A/B subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270944 [Multi-domain]  Cd Length: 279  Bit Score: 39.89  E-value: 4.35e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  41 VHKQ--DNEDKVNKAAKHLKTLRHPCLLRFLSCSVQDGGIHLVTE--PVQPLKRLLDNlsaEEI-------CAGLYDLLQ 109
Cdd:cd14042  38 VNKKriDLTREVLKELKHMRDLQHDNLTRFIGACVDPPNICILTEycPKGSLQDILEN---EDIkldwmfrYSLIHDIVK 114
                        90       100       110
                ....*....|....*....|....*....|.
gi 41054469 110 ALVFLHDRGKSSHNNVCISSVFVgeDGHWKL 140
Cdd:cd14042 115 GMHYLHDSEIKSHGNLKSSNCVV--DSRFVL 143
STKc_CDKL cd07833
Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs ...
40-149 7.22e-03

Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270827 [Multi-domain]  Cd Length: 288  Bit Score: 39.22  E-value: 7.22e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41054469  40 FVHKQDNEDKVNKAA---KHLKTLRHPCLLRFLSCSVQDGGIHLVTEPV-----QPLKRLLDNLSAEEICAGLYDLLQAL 111
Cdd:cd07833  34 FKESEDDEDVKKTALrevKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVertllELLEASPGGLPPDAVRSYIWQLLQAI 113
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 41054469 112 VFLHdRGKSSHNNVCISSVFVGEDGHWKLggmetvCKF 149
Cdd:cd07833 114 AYCH-SHNIIHRDIKPENILVSESGVLKL------CDF 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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