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Conserved domains on  [gi|52138635|ref|NP_942037|]
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electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor [Rattus norvegicus]

Protein Classification

electron transfer flavoprotein-ubiquinone oxidoreductase( domain architecture ID 11428947)

electron transfer flavoprotein-ubiquinone oxidoreductase accepts electrons from ETF and reduces ubiquinone

CATH:  3.30.70.20|3.30.9.90|3.50.50.60
EC:  1.5.5.1
Gene Ontology:  GO:0004174|GO:0022900|GO:0046872|GO:0051539
SCOP:  4000064|4000127

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 511-614 3.29e-74

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


:

Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 3.29e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   511 GQISFDLLSSVALSGTNHEHDQPAHLTLKDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKT 590
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 52138635   591 CDIKDPSQNINWVVPEGGGGPAYN 614
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
75-440 2.37e-60

Dehydrogenase (flavoprotein) [Energy production and conversion];


:

Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 202.50  E-value: 2.37e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  75 AGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIGAHTLSGAcLDPAAFKELFPDWKEkgAPLNTPVTEDRFAILTEKHr 154
Cdd:COG0644   1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 155 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLYHedgsvkgiatndvgiqkDGAPKTTFERGL 234
Cdd:COG0644  71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 235 ELHAKVTIFAEGCHGHLAKQLYKKFDLRascDAQTYGIGLKELWVIDEKK-WKPGRVDHTVGwplDRHTYGGSFLYHLNE 313
Cdd:COG0644 128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPLEgVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 314 GepLVAVGfvvgldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGLQsiPKLTFPGGLLIGCSPGFMNV 393
Cdd:COG0644 202 G--RVSVG-------------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 52138635 394 PKIKGTHTAMKSGSLAAEAIFKQLTSENLQSKTAglhvTEYEDNLKQ 440
Cdd:COG0644 235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
PLN02661 super family cl42517
Putative thiazole synthesis
 27-109 1.51e-03

Putative thiazole synthesis


The actual alignment was detected with superfamily member PLN02661:

Pssm-ID: 455862  Cd Length: 357  Bit Score: 41.35  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   27 LCAPRCSSTSAVPQITTHYTIHP-------REKDKRWEgVNMERFAEeADVVIVGAGPAGLSAAIRLKqlaaeQEKDIRV 99
Cdd:PLN02661  47 APARSSSSSSTAPYDLNNFKFAPikesivsREMTRRYM-TDMITYAD-TDVVIVGAGSAGLSCAYELS-----KNPNVKV 119

                         90
                 ....*....|
gi 52138635  100 CLVEKAAQIG 109
Cdd:PLN02661 120 AIIEQSVSPG 129
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 511-614 3.29e-74

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 3.29e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   511 GQISFDLLSSVALSGTNHEHDQPAHLTLKDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKT 590
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 52138635   591 CDIKDPSQNINWVVPEGGGGPAYN 614
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
75-440 2.37e-60

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 202.50  E-value: 2.37e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  75 AGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIGAHTLSGAcLDPAAFKELFPDWKEkgAPLNTPVTEDRFAILTEKHr 154
Cdd:COG0644   1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 155 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLYHedgsvkgiatndvgiqkDGAPKTTFERGL 234
Cdd:COG0644  71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 235 ELHAKVTIFAEGCHGHLAKQLYKKFDLRascDAQTYGIGLKELWVIDEKK-WKPGRVDHTVGwplDRHTYGGSFLYHLNE 313
Cdd:COG0644 128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPLEgVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 314 GepLVAVGfvvgldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGLQsiPKLTFPGGLLIGCSPGFMNV 393
Cdd:COG0644 202 G--RVSVG-------------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 52138635 394 PKIKGTHTAMKSGSLAAEAIFKQLTSENLQSKTAglhvTEYEDNLKQ 440
Cdd:COG0644 235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
521-616 1.15e-42

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 148.04  E-value: 1.15e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 521 VALSGTNHEHDQPaHLTLKDDSIPVNRNLsiyDGPEQRFCPAGVYEFVpleqGDGfRLQINAQNCVHCKTCDIKDPSQNI 600
Cdd:COG2440   1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIV----GDG-RLQINYENCLECGTCRIKCPTQNI 71

                        90
                ....*....|....*.
gi 52138635 601 NWVVPEGGGGPAYNGM 616
Cdd:COG2440  72 TWVYPEGGGGVNYRFG 87
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 69-440 1.28e-28

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 118.86  E-value: 1.28e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   69 DVVIVGAGPAGLSAAIRLKQLAAEqekdirVCLVEKAAQIGAHTLSGACLDPAAFKELFPDWKEKgAPLNTPVTEDRFAI 148
Cdd:PRK10157   7 DAIIVGAGLAGSVAALVLAREGAQ------VLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKLAF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  149 LTEKHRIPVPILPGLPMN-NHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLyHEDGSVkgiatndVGIQKDGAPk 227
Cdd:PRK10157  80 MTEKSAMTMDYCNGDETSpSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLV-QRDGKV-------VGVEADGDV- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  228 ttfergleLHAKVTIFAEGCHGHLAKQLykkfDLRASCDAQTYGIGLKELW-----VIDEK---KWKPGRVDHTVGWPLD 299
Cdd:PRK10157 151 --------IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIelpksVIEDRfqlQGNQGAACLFAGSPTD 218

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  300 rHTYGGSFLYhlnEGEPLVAVGFVVGLDY-QNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGLQSIPKLTF 378
Cdd:PRK10157 219 -GLMGGGFLY---TNENTLSLGLVCGLHHlHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVG 294

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52138635  379 PGGLLIGCSPGF-MNVP-KIKGTHTAMKSGSLAAEAIFKQLTSENLQSKTaglhVTEYEDNLKQ 440
Cdd:PRK10157 295 DGVLIAGDAAGMcMNLGfTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQK----LAEYRQHLES 354
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 69-413 2.79e-10

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 61.57  E-value: 2.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    69 DVVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIGAHTLSGAcLDPAAFKELFPDWKekgAPLNTPVTEDRFAI 148
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLAD------KGLRVLLLEKKSFPRYKPCGGA-LSPRALEELDLPGE---LIVNLVRGARFFSP 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   149 LTEKHRIPVPILPGlpmnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATndvgiqkdgapkt 228
Cdd:TIGR02032  72 NGDSVEIPIETELA--------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRG------------- 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   229 tfeRGLELHAKVTIFAEGCHGHLAKQLYKKFDLRASCDAQTYGIGLKElwviDEKKWKPGRVDhtvgwpLDRHTYGGSFL 308
Cdd:TIGR02032 131 ---SEGTVTAKIVIGADGSRSIVAKKLGLKKEPREYGVAARAEVEMPD----EEVDEDFVEVY------IDRGIVPGGYG 197

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   309 YHLNEGEPLVAVGfvVGLDYQNPYLSPFREFQRW-KHHPSIRPTLEGGKRiaygaralneGGLqsIP------KLTFPGG 381
Cdd:TIGR02032 198 WVFPKGDGTANVG--VGSRSAEEGEDPKKYLKDFlARRPELKDAETVEVC----------GAL--IPigrpdeKLVRGNV 263

                         330       340       350
                  ....*....|....*....|....*....|..
gi 52138635   382 LLIGCSPGFMNVPKIKGTHTAMKSGSLAAEAI 413
Cdd:TIGR02032 264 LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 69-255 6.81e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 51.90  E-value: 6.81e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    69 DVVIVGAGPAGLSAAIRlkqlAAEQEKdiRVCLVEKAAQIGAHT-------------------------------LSGAC 117
Cdd:pfam00890   1 DVLVIGGGLAGLAAALA----AAEAGL--KVAVVEKGQPFGGATawssggidalgnppqggidspelhptdtlkgLDELA 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   118 LDPAAfkELFP-------DW-KEKGAPLNTpvTED------RFAILTEKHRIPVPILPGLPMNNHGNYIVRLGHlvswmg 183
Cdd:pfam00890  75 DHPYV--EAFVeaapeavDWlEALGVPFSR--TEDghldlrPLGGLSATWRTPHDAADRRRGLGTGHALLARLL------ 144

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 52138635   184 EQAEALGVEVYPGYAAAEVLyHEDGSVKGIAtndVGIQKDGapkttfeRGLELHAKV-TIFAEGCHGHLAKQL 255
Cdd:pfam00890 145 EGLRKAGVDFQPRTAADDLI-VEDGRVTGAV---VENRRNG-------REVRIRAIAaVLLATGGFGRLAELL 206
PLN02661 PLN02661
Putative thiazole synthesis
 27-109 1.51e-03

Putative thiazole synthesis


Pssm-ID: 178267  Cd Length: 357  Bit Score: 41.35  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   27 LCAPRCSSTSAVPQITTHYTIHP-------REKDKRWEgVNMERFAEeADVVIVGAGPAGLSAAIRLKqlaaeQEKDIRV 99
Cdd:PLN02661  47 APARSSSSSSTAPYDLNNFKFAPikesivsREMTRRYM-TDMITYAD-TDVVIVGAGSAGLSCAYELS-----KNPNVKV 119

                         90
                 ....*....|
gi 52138635  100 CLVEKAAQIG 109
Cdd:PLN02661 120 AIIEQSVSPG 129
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 511-614 3.29e-74

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 3.29e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   511 GQISFDLLSSVALSGTNHEHDQPAHLTLKDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKT 590
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 52138635   591 CDIKDPSQNINWVVPEGGGGPAYN 614
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
75-440 2.37e-60

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 202.50  E-value: 2.37e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  75 AGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIGAHTLSGAcLDPAAFKELFPDWKEkgAPLNTPVTEDRFAILTEKHr 154
Cdd:COG0644   1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 155 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLYHedgsvkgiatndvgiqkDGAPKTTFERGL 234
Cdd:COG0644  71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 235 ELHAKVTIFAEGCHGHLAKQLYKKFDLRascDAQTYGIGLKELWVIDEKK-WKPGRVDHTVGwplDRHTYGGSFLYHLNE 313
Cdd:COG0644 128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPLEgVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 314 GepLVAVGfvvgldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGLQsiPKLTFPGGLLIGCSPGFMNV 393
Cdd:COG0644 202 G--RVSVG-------------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 52138635 394 PKIKGTHTAMKSGSLAAEAIFKQLTSENLQSKTAglhvTEYEDNLKQ 440
Cdd:COG0644 235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
521-616 1.15e-42

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 148.04  E-value: 1.15e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 521 VALSGTNHEHDQPaHLTLKDDSIPVNRNLsiyDGPEQRFCPAGVYEFVpleqGDGfRLQINAQNCVHCKTCDIKDPSQNI 600
Cdd:COG2440   1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIV----GDG-RLQINYENCLECGTCRIKCPTQNI 71

                        90
                ....*....|....*.
gi 52138635 601 NWVVPEGGGGPAYNGM 616
Cdd:COG2440  72 TWVYPEGGGGVNYRFG 87
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 69-440 1.28e-28

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 118.86  E-value: 1.28e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   69 DVVIVGAGPAGLSAAIRLKQLAAEqekdirVCLVEKAAQIGAHTLSGACLDPAAFKELFPDWKEKgAPLNTPVTEDRFAI 148
Cdd:PRK10157   7 DAIIVGAGLAGSVAALVLAREGAQ------VLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKLAF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  149 LTEKHRIPVPILPGLPMN-NHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLyHEDGSVkgiatndVGIQKDGAPk 227
Cdd:PRK10157  80 MTEKSAMTMDYCNGDETSpSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLV-QRDGKV-------VGVEADGDV- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  228 ttfergleLHAKVTIFAEGCHGHLAKQLykkfDLRASCDAQTYGIGLKELW-----VIDEK---KWKPGRVDHTVGWPLD 299
Cdd:PRK10157 151 --------IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIelpksVIEDRfqlQGNQGAACLFAGSPTD 218

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  300 rHTYGGSFLYhlnEGEPLVAVGFVVGLDY-QNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGLQSIPKLTF 378
Cdd:PRK10157 219 -GLMGGGFLY---TNENTLSLGLVCGLHHlHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVG 294

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52138635  379 PGGLLIGCSPGF-MNVP-KIKGTHTAMKSGSLAAEAIFKQLTSENLQSKTaglhVTEYEDNLKQ 440
Cdd:PRK10157 295 DGVLIAGDAAGMcMNLGfTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQK----LAEYRQHLES 354
PRK10015 PRK10015
oxidoreductase; Provisional
 66-453 1.53e-28

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 118.54  E-value: 1.53e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   66 EEADVVIVGAGPAGLSAAIRLKQLAAEqekdirVCLVEKAAQIGAHTLSGACLDPAAFKELFPDWKEKgAPLNTPVTEDR 145
Cdd:PRK10015   4 DKFDAIVVGAGVAGSVAALVMARAGLD------VLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  146 FAILTEK-------HRIPvpilPGLPmnNHGNYIVRLGHLVSWMGEQAEALGVEVYPGyAAAEVLYHEDGSVKGI-ATND 217
Cdd:PRK10015  77 ISFLTEEsavtldfHREQ----PDVP--QHASYTVLRNRLDPWLMEQAEQAGAQFIPG-VRVDALVREGNKVTGVqAGDD 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  218 VgiqkdgapkttfergleLHAKVTIFAEGCHGHLAKQLykkfDLRASCDAQTYGIGLKELW-----VIDEK---KWKPGR 289
Cdd:PRK10015 150 I-----------------LEANVVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIgltpeQINDRfniTGEEGA 208

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  290 VDHTVGWPLDrHTYGGSFLYhlnEGEPLVAVGFVVGL-DYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEG 368
Cdd:PRK10015 209 AWLFAGSPSD-GLMGGGFLY---TNKDSISLGLVCGLgDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEG 284

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  369 GLQSIPKLTFPGGLLIGCSPGF-MNVP-KIKGTHTAMKSGSLAAE-AIFKQLTSENLQSKTAGlhvteYEDNLKQSWVWK 445
Cdd:PRK10015 285 GLAMVPQLVNDGVMIVGDAAGFcLNLGfTVRGMDLAIASAQAAATtVIAAKERADFSASSLAQ-----YKRELEQSCVMR 359


                 ....*...
gi 52138635  446 ELHAVRNI 453
Cdd:PRK10015 360 DMQHFRKI 367
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 66-253 2.78e-14

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 75.25  E-value: 2.78e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  66 EEADVVIVGAGPAGLSAAIRLKqlaaeqEKDIRVCLVEKAAQIGAHT-LSG----ACLDPAAFK-------ELFPDWKEK 133
Cdd:COG1053   2 HEYDVVVVGSGGAGLRAALEAA------EAGLKVLVLEKVPPRGGHTaAAQgginAAGTNVQKAagedspeEHFYDTVKG 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 134 GAPLNTPVTEDRFA-------ILTEKH-----RIPVPILPGLPMNNHGNYI---VRLGH-LVSWMGEQAEALGVEVYPGY 197
Cdd:COG1053  76 GDGLADQDLVEALAeeapeaiDWLEAQgvpfsRTPDGRLPQFGGHSVGRTCyagDGTGHaLLATLYQAALRLGVEIFTET 155

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 52138635 198 AAAEvLYHEDGSVKGIatndVGIQKDGAPKTtfergleLHAKVTIFAEGCHGHLAK 253
Cdd:COG1053 156 EVLD-LIVDDGRVVGV----VARDRTGEIVR-------IRAKAVVLATGGFGRNYE 199
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 65-255 2.41e-12

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 68.43  E-value: 2.41e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  65 AEEADVVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIG----AHTLSGACLDpaAFKEL--FPDWKEKGAPLn 138
Cdd:COG0654   1 MMRTDVLIVGGGPAGLALALALAR------AGIRVTVVERAPPPRpdgrGIALSPRSLE--LLRRLglWDRLLARGAPI- 71

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 139 tpvteDRFAILTEKHRIPVPILPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLYHEDGsvkgiatndV 218
Cdd:COG0654  72 -----RGIRVRDGSDGRVLARFDAAETGLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADG---------V 137

                       170       180       190
                ....*....|....*....|....*....|....*..
gi 52138635 219 GIqkdgapktTFERGLELHAKVTIFAEGCHGHLAKQL 255
Cdd:COG0654 138 TV--------TLADGRTLRADLVVGADGARSAVRRLL 166
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 69-413 2.79e-10

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 61.57  E-value: 2.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    69 DVVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIGAHTLSGAcLDPAAFKELFPDWKekgAPLNTPVTEDRFAI 148
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLAD------KGLRVLLLEKKSFPRYKPCGGA-LSPRALEELDLPGE---LIVNLVRGARFFSP 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   149 LTEKHRIPVPILPGlpmnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATndvgiqkdgapkt 228
Cdd:TIGR02032  72 NGDSVEIPIETELA--------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRG------------- 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   229 tfeRGLELHAKVTIFAEGCHGHLAKQLYKKFDLRASCDAQTYGIGLKElwviDEKKWKPGRVDhtvgwpLDRHTYGGSFL 308
Cdd:TIGR02032 131 ---SEGTVTAKIVIGADGSRSIVAKKLGLKKEPREYGVAARAEVEMPD----EEVDEDFVEVY------IDRGIVPGGYG 197

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   309 YHLNEGEPLVAVGfvVGLDYQNPYLSPFREFQRW-KHHPSIRPTLEGGKRiaygaralneGGLqsIP------KLTFPGG 381
Cdd:TIGR02032 198 WVFPKGDGTANVG--VGSRSAEEGEDPKKYLKDFlARRPELKDAETVEVC----------GAL--IPigrpdeKLVRGNV 263

                         330       340       350
                  ....*....|....*....|....*....|..
gi 52138635   382 LLIGCSPGFMNVPKIKGTHTAMKSGSLAAEAI 413
Cdd:TIGR02032 264 LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 65-198 1.77e-07

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 53.94  E-value: 1.77e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  65 AEEADVVIVGAGPAGLSAAIRLKQLAAeqekdiRVCLVEKaaqigaHTLSGACL-----------DPAAFKELFPDWKEK 133
Cdd:COG1249   1 MKDYDLVVIGAGPGGYVAAIRAAQLGL------KVALVEK------GRLGGTCLnvgcipskallHAAEVAHEARHAAEF 68

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 52138635 134 GAPLNTPvTEDRFAILTEKHRIpvpilpglpmnnhgnyivrLGHLVSWMGEQAEALGVEVYPGYA 198
Cdd:COG1249  69 GISAGAP-SVDWAALMARKDKV-------------------VDRLRGGVEELLKKNGVDVIRGRA 113
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
66-263 2.20e-07

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 53.37  E-value: 2.20e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  66 EEADVVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVEkAAQIGAHTlSGAC-------LDPAAFKELFP---------- 128
Cdd:COG0665   1 ATADVVVIGGGIAGLSTAYHL------ARRGLDVTVLE-RGRPGSGA-SGRNagqlrpgLAALADRALVRlarealdlwr 72

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 129 ----------DWKEKGApLNTPVTEDRFAILTEKHR------IPVPIL---------PGLPMNN--HGNYIVRLGH---- 177
Cdd:COG0665  73 elaaelgidcDFRRTGV-LYLARTEAELAALRAEAEalralgLPVELLdaaelrerePGLGSPDyaGGLYDPDDGHvdpa 151

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 178 -LVSWMGEQAEALGVEVYPGYAAAEVLyHEDGSVKGIATndvgiqkdgapkttfERGlELHAKVTIFAEGCH-GHLAKQL 255
Cdd:COG0665 152 kLVRALARAARAAGVRIREGTPVTGLE-REGGRVTGVRT---------------ERG-TVRADAVVLAAGAWsARLLPML 214


                ....*...
gi 52138635 256 YKKFDLRA 263
Cdd:COG0665 215 GLRLPLRP 222
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 65-119 3.59e-07

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 52.94  E-value: 3.59e-07
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 52138635  65 AEEADVVIVGAGPAGLSAAIRLKQLaaeqekDIRVCLVEKAAQIG----AHTLSGACLD 119
Cdd:COG2072   4 TEHVDVVVIGAGQAGLAAAYHLRRA------GIDFVVLEKADDVGgtwrDNRYPGLRLD 56
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 69-114 5.23e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 52.54  E-value: 5.23e-07
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*...
gi 52138635  69 DVVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVEKAAQIG--AHTLS 114
Cdd:COG1233   5 DVVVIGAGIGGLAAAALL------ARAGYRVTVLEKNDTPGgrARTFE 46
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 69-255 6.81e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 51.90  E-value: 6.81e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    69 DVVIVGAGPAGLSAAIRlkqlAAEQEKdiRVCLVEKAAQIGAHT-------------------------------LSGAC 117
Cdd:pfam00890   1 DVLVIGGGLAGLAAALA----AAEAGL--KVAVVEKGQPFGGATawssggidalgnppqggidspelhptdtlkgLDELA 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   118 LDPAAfkELFP-------DW-KEKGAPLNTpvTED------RFAILTEKHRIPVPILPGLPMNNHGNYIVRLGHlvswmg 183
Cdd:pfam00890  75 DHPYV--EAFVeaapeavDWlEALGVPFSR--TEDghldlrPLGGLSATWRTPHDAADRRRGLGTGHALLARLL------ 144

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 52138635   184 EQAEALGVEVYPGYAAAEVLyHEDGSVKGIAtndVGIQKDGapkttfeRGLELHAKV-TIFAEGCHGHLAKQL 255
Cdd:pfam00890 145 EGLRKAGVDFQPRTAADDLI-VEDGRVTGAV---VENRRNG-------REVRIRAIAaVLLATGGFGRLAELL 206
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 69-216 9.97e-07

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 51.24  E-value: 9.97e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    69 DVVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVEKAAQIGAHTlSGA----------CLDPAAFKELF----------- 127
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYEL------ARRGLSVTLLERGDDPGSGA-SGRnaglihpglrYLEPSELARLAlealdlweele 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   128 ------PDWKEKGA-PLNTPVTEDRFAILTE---KHRIPVPIL---------PGLPMNNHGNYIVRLGH-----LVSWMG 183
Cdd:pfam01266  74 eelgidCGFRRCGVlVLARDEEEEALEKLLAalrRLGVPAELLdaeelrelePLLPGLRGGLFYPDGGHvdparLLRALA 153

                         170       180       190
                  ....*....|....*....|....*....|...
gi 52138635   184 EQAEALGVEVYPGYAAAEVLyhEDGSVKGIATN 216
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTGIE--EEGGVWGVVTT 184
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 69-109 1.71e-06

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 50.60  E-value: 1.71e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 52138635  69 DVVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVEKAAQIG 109
Cdd:COG1232   3 RVAVIGGGIAGLTAAYRL------AKAGHEVTVLEASDRVG 37
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 67-261 2.64e-06

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 49.01  E-value: 2.64e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    67 EADVVIVGAGPAGLSAAIRLKqlaaeQEKDIRVCLVEKAAQIGAHTLSGACLDPAAFkelfpdwkekgaplntpVTEDRF 146
Cdd:pfam01946  17 ESDVVIVGAGSSGLTAAYYLA-----KNRGLKVAIIERSVSPGGGAWLGGQLFSAMV-----------------VRKPAH 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   147 AILTEKhripvpilpGLPMNNHGNYIVrLGHLVSWMGEQAEAL----GVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQK 222
Cdd:pfam01946  75 LFLDEF---------GIPYEDEGDYVV-VKHAALFTSTLMSKAlqlpNVKLFNATSVEDLIVRPGVGVAGVVTNWTLVEQ 144

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 52138635   223 DGA---PKTtfergleLHAKVTIFAEGCHGHLAKQLYKKFDL 261
Cdd:pfam01946 145 AGLhmdPNT-------IRAKVVVSATGHDGPFGAFCVKRIKL 179
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
66-116 3.36e-06

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 49.76  E-value: 3.36e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|.
gi 52138635  66 EEADVVIVGAGPAGLSAAIRLKQLaaeqeKDIRVCLVEKAAQIGAHTlSGA 116
Cdd:COG0579   3 EMYDVVIIGAGIVGLALARELSRY-----EDLKVLVLEKEDDVAQES-SGN 47
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
69-147 3.36e-06

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 49.95  E-value: 3.36e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  69 DVVIVGAGPAGLSAAIrlkQLAAEQEKDIRVCLVEKAAQIGA----HTLSGACL-------------DPAAFKelfpDW- 130
Cdd:COG4529   7 RIAIIGGGASGTALAI---HLLRRAPEPLRITLFEPRPELGRgvaySTDSPEHLlnvpagrmsafpdDPDHFL----RWl 79

                        90
                ....*....|....*..
gi 52138635 131 KEKGAPLNTPVTEDRFA 147
Cdd:COG4529  80 RENGARAAPAIDPDAFV 96
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
61-208 4.07e-06

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 49.53  E-value: 4.07e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  61 MERFAEEADVVIVGAGPAGLSAAIRLKQLaaeqekDIRVCLVEKAAQIG--AHTLSGACLDPAAfkelfpdwkEKGApln 138
Cdd:COG1231   1 MSRRARGKDVVIVGAGLAGLAAARELRKA------GLDVTVLEARDRVGgrVWTLRFGDDGLYA---------ELGA--- 62

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 52138635 139 tpvtedrfailtekHRIPVpilpglpmnNHGNYIvrlgHLvswmgeqAEALGVEVYPGY-AAAEVLYHEDG 208
Cdd:COG1231  63 --------------MRIPP---------SHTNLL----AL-------ARELGLPLEPFPnENGNALLYLGG 99
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 69-132 1.09e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 47.70  E-value: 1.09e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52138635    69 DVVIVGAGPAGLSAAIRLKQLaaeqEKDIRVCLVEKAAQIGAHTLSGACLDPAAFKELFPDWKE 132
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTLAQL----GGKVTLIEDEGTCPYGGCVLSKALLGAAEAPEIASLWAD 61
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 66-118 1.15e-05

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 48.25  E-value: 1.15e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 52138635   66 EEADVVIVGAGPAGLSAAIRLKQLAAeqekdiRVCLVEKAaqigahTLSGACL 118
Cdd:PRK06292   2 EKYDVIVIGAGPAGYVAARRAAKLGK------KVALIEKG------PLGGTCL 42
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 67-255 2.44e-05

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 46.93  E-value: 2.44e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    67 EADVVIVGAGPAGLSAAIRLKQLAaeqekdIRVCLVEKAAqiGAHTLSGAC-LDPAAFkELFPD------WKEKGAPlnt 139
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAG------VRVVLVERHA--TTSVLPRAHgLNQRTM-ELLRQagledrILAEGVP--- 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   140 pvtEDRFAILTEKHRIPV---PILPGLPMNNHG-NYIVRLghlvswMGEQAEALGVEVYPGyaaAEVLYHE--DGSVKGI 213
Cdd:pfam01494  69 ---HEGMGLAFYNTRRRAdldFLTSPPRVTVYPqTELEPI------LVEHAEARGAQVRFG---TEVLSLEqdGDGVTAV 136

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 52138635   214 ATNdvgiQKDGAPKTtfergleLHAKVTIFAEGCHGHLAKQL 255
Cdd:pfam01494 137 VRD----RRDGEEYT-------VRAKYLVGCDGGRSPVRKTL 167
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 64-118 2.54e-05

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 47.06  E-value: 2.54e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 52138635   64 FAEEADVVIVGAGPAGLSAAIRLKQLaaeqekDIRVCLVEKAaqigahTLSGACL 118
Cdd:PRK06416   1 FAFEYDVIVIGAGPGGYVAAIRAAQL------GLKVAIVEKE------KLGGTCL 43
HI0933_like pfam03486
HI0933-like protein;
69-246 3.11e-05

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 46.81  E-value: 3.11e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635    69 DVVIVGAGPAGLSAAIRLKQLAAeqekdiRVCLVEKAAQIGAHTL-SG--------ACLDPAAFKELFPD-WKEKGAPLN 138
Cdd:pfam03486   2 DVIVIGGGAAGLMAAISAAKRGR------RVLLIEKGKKLGRKILiSGggrcnvtnLSEEPDNFLSRYPGnPKFLKSALS 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   139 TpVTEDRFAILTEKHRIPVPILPG---LPMNNHGNYIVRLghLVSWMgeqaEALGVEVYPGYAAAEVlYHEDGSVKGIAT 215
Cdd:pfam03486  76 R-FTPWDFIAFFESLGVPLKEEDHgrlFPDSDKASDIVDA--LLNEL----KELGVKIRLRTRVLSV-EKDDDGRFRVKT 147

                         170       180       190
                  ....*....|....*....|....*....|.
gi 52138635   216 NdvgiqkdgapkttferGLELHAKVTIFAEG 246
Cdd:pfam03486 148 G----------------GEELEADSLVLATG 162
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 69-103 3.78e-05

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 46.26  E-value: 3.78e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 52138635    69 DVVIVGAGPAGLSAAIRLkqlaAEQEKDIRVCLVE 103
Cdd:pfam05834   1 DVVIIGAGPAGLSLAARL----AAAKPGLSVVLIE 31
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
69-248 4.01e-05

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 45.88  E-value: 4.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635  69 DVVIVGAGPAGLSAAIRLKQLaaeqekDIRVCLVEKaAQIGahtlsgacldpaafkelfpdwkekGAPLNTPVTEDrfai 148
Cdd:COG0492   2 DVVIIGAGPAGLTAAIYAARA------GLKTLVIEG-GEPG------------------------GQLATTKEIEN---- 46

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635 149 ltekhripvpiLPGLPMNNHGNYIVRLGHlvswmgEQAEALGVEVYPGyaaaEVlyhedgsvkgiatndVGIQKDGAPKT 228
Cdd:COG0492  47 -----------YPGFPEGISGPELAERLR------EQAERFGAEILLE----EV---------------TSVDKDDGPFR 90

                       170       180
                ....*....|....*....|.
gi 52138635 229 -TFERGLELHAKVTIFAEGCH 248
Cdd:COG0492  91 vTTDDGTEYEAKAVIIATGAG 111
PRK08294 PRK08294
phenol 2-monooxygenase; Provisional
 49-104 4.30e-05

phenol 2-monooxygenase; Provisional


Pssm-ID: 236223 [Multi-domain]  Cd Length: 634  Bit Score: 46.52  E-value: 4.30e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 52138635   49 PREKDKRWEGVNM-ERFAEEADVVIVGAGPAGLSAAIRLKQLAaeqekDIRVCLVEK 104
Cdd:PRK08294  13 PRIQPAAGRGINRpADLPDEVDVLIVGCGPAGLTLAAQLSAFP-----DITTRIVER 64
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
72-114 4.86e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 41.36  E-value: 4.86e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 52138635    72 IVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIGAHTLS 114
Cdd:pfam13450   1 IVGAGLAGLVAAALLAK------RGFRVLVLEKRDRLGGNAYS 37
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
65-108 7.66e-05

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 45.67  E-value: 7.66e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 52138635   65 AEEADVVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQI 108
Cdd:PRK06183   8 AHDTDVVIVGAGPVGLTLANLLGQ------YGVRVLVLERWPTL 45
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
69-104 8.72e-05

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 45.49  E-value: 8.72e-05
                        10        20        30
                ....*....|....*....|....*....|....*.
gi 52138635  69 DVVIVGAGPAGLSAAIRLKqlaaeqEKDIRVCLVEK 104
Cdd:COG2509  32 DVVIVGAGPAGLFAALELA------EAGLKPLVLER 61
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
71-109 9.33e-05

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 45.04  E-value: 9.33e-05
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 52138635  71 VIVGAGPAGLSAAIRLKQLAAeqekdiRVCLVEKAAQIG 109
Cdd:COG2081   1 IVIGAGAAGLMAAITAAERGA------RVLLLEKNPKVG 33
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
69-134 9.74e-05

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 44.87  E-value: 9.74e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 52138635  69 DVVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVEKAAQIG----AHTLSGACLDP---------AAFKELFPDWKEKG 134
Cdd:COG3380   5 DIAIIGAGIAGLAAARAL------QDAGHEVTVFEKSRGVGgrmaTRRLDGGRFDHgaqyftardPRFQALVEEWLAAG 77
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
69-111 1.49e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 44.85  E-value: 1.49e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 52138635  69 DVVIVGAGPAGLSAAIRLkqlaAEQEkdIRVCLVEKAAQIGAH 111
Cdd:COG1148 142 RALVIGGGIAGMTAALEL----AEQG--YEVYLVEKEPELGGR 178
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
67-119 1.51e-04

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 44.46  E-value: 1.51e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 52138635   67 EADVVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVEKAaqIGAHTLSGACLD 119
Cdd:PRK05329   2 KFDVLVIGGGLAGLTAALAA------AEAGKRVALVAKG--QGALHFSSGSID 46
PRK09231 PRK09231
fumarate reductase flavoprotein subunit; Validated
 68-114 1.64e-04

fumarate reductase flavoprotein subunit; Validated


Pssm-ID: 236421 [Multi-domain]  Cd Length: 582  Bit Score: 44.62  E-value: 1.64e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 52138635   68 ADVVIVGAGPAGLSAAIRlkqlAAEQEKDIRVCLVEKAAQIGAHTLS 114
Cdd:PRK09231   5 ADLAIIGAGGAGLRAAIA----AAEANPNLKIALISKVYPMRSHTVA 47
PRK07233 PRK07233
hypothetical protein; Provisional
 70-109 3.00e-04

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 43.72  E-value: 3.00e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 52138635   70 VVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVEKAAQIG 109
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRL------AKRGHEVTVFEADDQLG 35
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 69-109 3.17e-04

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 43.69  E-value: 3.17e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 52138635  69 DVVIVGAGPAGLSAAIRLkqlaAEQekDIRVCLVEKAAQIG 109
Cdd:COG3349   5 RVVVVGGGLAGLAAAVEL----AEA--GFRVTLLEARPRLG 39
PRK06847 PRK06847
hypothetical protein; Provisional
 69-208 3.60e-04

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 43.32  E-value: 3.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   69 DVVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKA---AQIGAH-TLSGACLdpAAFKEL--FPDWKEKGAPLNTpvt 142
Cdd:PRK06847   6 KVLIVGGGIGGLSAAIALRR------AGIAVDLVEIDpewRVYGAGiTLQGNAL--RALRELgvLDECLEAGFGFDG--- 74

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52138635  143 edrFAILTEK----HRIPVPIL--PGLPMNNHgnyIVR--LGHLvswMGEQAEALGVEVYPGYAAAEVLYHEDG 208
Cdd:PRK06847  75 ---VDLFDPDgtllAELPTPRLagDDLPGGGG---IMRpaLARI---LADAARAAGADVRLGTTVTAIEQDDDG 139
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
67-106 3.73e-04

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 43.37  E-value: 3.73e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 52138635   67 EADVVIVGAGPAGLSAAIRLKQLAaeqeKDIRVCLVEKAA 106
Cdd:PRK06854  11 DTDILIIGGGMAGCGAAFEAKEWA----PDLKVLIVEKAN 46
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 70-109 4.94e-04

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 42.91  E-value: 4.94e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 52138635   70 VVIVGAGPAGLSAAIRLKQlaaeQEKDIRVCLVEKAAQIG 109
Cdd:PRK11883   3 VAIIGGGITGLSAAYRLHK----KGPDADITLLEASDRLG 38
lipoamide_DH TIGR01350
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ...
 69-118 5.08e-04

dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.


Pssm-ID: 273568 [Multi-domain]  Cd Length: 460  Bit Score: 43.01  E-value: 5.08e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 52138635    69 DVVIVGAGPAGLSAAIRLKQLAAeqekdiRVCLVEKAaqigahTLSGACL 118
Cdd:TIGR01350   3 DVIVIGGGPGGYVAAIRAAQLGL------KVALVEKE------YLGGTCL 40
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 66-106 7.70e-04

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 42.40  E-value: 7.70e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 52138635  66 EEADVVIVGAGPAGLSAAIRLKQLAaeqekdiRVCLVEKAA 106
Cdd:COG0029   3 LKTDVLVIGSGIAGLSAALKLAERG-------RVTLLTKGE 36
PRK06370 PRK06370
FAD-containing oxidoreductase;
61-118 7.96e-04

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 42.11  E-value: 7.96e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 52138635   61 MERFaeeaDVVIVGAGPAGLSAAIRLKQLAAeqekdiRVCLVEKaaqigaHTLSGACL 118
Cdd:PRK06370   3 AQRY----DAIVIGAGQAGPPLAARAAGLGM------KVALIER------GLLGGTCV 44
PRK09126 PRK09126
FAD-dependent hydroxylase;
69-106 1.02e-03

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 41.85  E-value: 1.02e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 52138635   69 DVVIVGAGPAGLSAAIRLKQLaaeqekDIRVCLVEKAA 106
Cdd:PRK09126   5 DIVVVGAGPAGLSFARSLAGS------GLKVTLIERQP 36
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 69-109 1.04e-03

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 41.83  E-value: 1.04e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 52138635    69 DVVIVGAGPAGLSAAIRlkqlAAEQEKdiRVCLVEKAAQIG 109
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIA----AARAGA--KVLLVERRGFLG 35
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
69-117 1.26e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 41.68  E-value: 1.26e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 52138635   69 DVVIVGAGPAGLSAAIRlkqlAAEQEKdiRVCLVEKAAQIGahtlsGAC 117
Cdd:PRK05249   7 DLVVIGSGPAGEGAAMQ----AAKLGK--RVAVIERYRNVG-----GGC 44
sdhA PRK06069
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
61-114 1.37e-03

succinate dehydrogenase/fumarate reductase flavoprotein subunit;


Pssm-ID: 235689 [Multi-domain]  Cd Length: 577  Bit Score: 41.58  E-value: 1.37e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 52138635   61 MERFaeEADVVIVGAGPAGLSAAIRlkqlAAEQEKD-IRVCLVEKAAQIGAHTLS 114
Cdd:PRK06069   1 MEVL--KYDVVIVGSGLAGLRAAVA----AAERSGGkLSVAVVSKTQPMRSHSVS 49
PLN02661 PLN02661
Putative thiazole synthesis
 27-109 1.51e-03

Putative thiazole synthesis


Pssm-ID: 178267  Cd Length: 357  Bit Score: 41.35  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52138635   27 LCAPRCSSTSAVPQITTHYTIHP-------REKDKRWEgVNMERFAEeADVVIVGAGPAGLSAAIRLKqlaaeQEKDIRV 99
Cdd:PLN02661  47 APARSSSSSSTAPYDLNNFKFAPikesivsREMTRRYM-TDMITYAD-TDVVIVGAGSAGLSCAYELS-----KNPNVKV 119

                         90
                 ....*....|
gi 52138635  100 CLVEKAAQIG 109
Cdd:PLN02661 120 AIIEQSVSPG 129
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 70-109 1.58e-03

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 41.39  E-value: 1.58e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 52138635   70 VVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIG 109
Cdd:PRK08132  26 VVVVGAGPVGLALAIDLAQ------QGVPVVLLDDDDTLS 59
PRK06481 PRK06481
flavocytochrome c;
66-113 1.61e-03

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 41.36  E-value: 1.61e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 52138635   66 EEADVVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIGAHTL 113
Cdd:PRK06481  60 DKYDIVIVGAGGAGMSAAIEAKD------AGMNPVILEKMPVAGGNTM 101
PRK07208 PRK07208
hypothetical protein; Provisional
 69-109 1.75e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 41.03  E-value: 1.75e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 52138635   69 DVVIVGAGPAGLSAAIRLKQlaaeqeKDIRVCLVEKAAQIG 109
Cdd:PRK07208   6 SVVIIGAGPAGLTAAYELLK------RGYPVTVLEADPVVG 40
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
65-116 1.98e-03

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 41.17  E-value: 1.98e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 52138635   65 AEEADVVIVGAGPAGLSAAIRlkqlAAEQekDIRVCLVEKAAQIGAHTL-SGA 116
Cdd:PRK07843   5 VQEYDVVVVGSGAAGMVAALT----AAHR--GLSTVVVEKAPHYGGSTArSGG 51
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
 64-115 2.20e-03

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 40.86  E-value: 2.20e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 52138635   64 FAEEADVVIVGAGPAGLSAAIrlkqLAAEQekDIRVCLVEKAAQIGAHT-LSG 115
Cdd:PRK06134   9 PDLECDVLVIGSGAAGLSAAV----TAAWH--GLKVIVVEKDPVFGGTTaWSG 55
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 66-135 2.23e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 40.89  E-value: 2.23e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 52138635   66 EEADVVIVGAGPAGLSAAirlkqLAAeQEKDIRVCLVEKAAQIGAHT-LSGACL----DPAAFKELFPDWKEKGA 135
Cdd:PRK12844   5 ETYDVVVVGSGGGGMCAA-----LAA-ADSGLEPLIVEKQDKVGGSTaMSGGVLwlpnNPLMKAAGVPDSHEDAL 73
GlpB COG3075
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
69-119 2.90e-03

Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];


Pssm-ID: 442309  Cd Length: 415  Bit Score: 40.55  E-value: 2.90e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|.
gi 52138635  69 DVVIVGAGPAGLSAAIRLkqlaaeQEKDIRVCLVekAAQIGAHTLSGACLD 119
Cdd:COG3075   4 DVVVIGGGLAGLTAAIRA------AEAGLRVAIV--SAGQSALHFSSGSLD 46
PRK12843 PRK12843
FAD-dependent oxidoreductase;
57-116 2.96e-03

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 40.49  E-value: 2.96e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 52138635   57 EGVNMERFAEEADVVIVGAGPAGLSAAirlkqLAAEQEkDIRVCLVEKAAQIGAHT-LSGA 116
Cdd:PRK12843   6 SELSPERWDAEFDVIVIGAGAAGMSAA-----LFAAIA-GLKVLLVERTEYVGGTTaTSAG 60
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 66-103 3.15e-03

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 40.58  E-value: 3.15e-03
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 52138635  66 EEADVVIVGAGPAGLSAAIRLkqlaAEQEkDIRVCLVE 103
Cdd:COG2303   3 EEYDYVIVGAGSAGCVLANRL----SEDA-GLRVLLLE 35
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 67-118 4.60e-03

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 40.06  E-value: 4.60e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 52138635   67 EADVVIVGAGPAGLSAAIRLKQLAaeqekdIRVCLVEKAAQIGAHT-LSGACL 118
Cdd:PRK12842   9 TCDVLVIGSGAGGLSAAITARKLG------LDVVVLEKEPVFGGTTaFSGGVL 55
PRK08275 PRK08275
putative oxidoreductase; Provisional
 67-105 5.31e-03

putative oxidoreductase; Provisional


Pssm-ID: 181346 [Multi-domain]  Cd Length: 554  Bit Score: 39.65  E-value: 5.31e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 52138635   67 EADVVIVGAGPAGLSAAIRlkqlAAEQEKDIRVCLVEKA 105
Cdd:PRK08275   9 ETDILVIGGGTAGPMAAIK----AKERNPALRVLLLEKA 43
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
68-104 6.56e-03

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 39.35  E-value: 6.56e-03
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 52138635  68 ADVVIVGAGPAGLSAAirlKQLAAEQEKDIRVCLVEK 104
Cdd:COG1252   2 KRIVIVGGGFAGLEAA---RRLRKKLGGDAEVTLIDP 35
NAD_binding_9 pfam13454
FAD-NAD(P)-binding;
71-105 7.80e-03

FAD-NAD(P)-binding;


Pssm-ID: 433222 [Multi-domain]  Cd Length: 155  Bit Score: 37.26  E-value: 7.80e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 52138635    71 VIVGAGPAGLSAAIRLkqLAAEQEKDIRVCLVEKA 105
Cdd:pfam13454   1 AIVGGGPSGLALLERL--LARAPKRPLEITLFDPS 33
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
69-122 9.21e-03

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 38.73  E-value: 9.21e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 52138635   69 DVVIVGAGPAGLSAAIRLkqlaaeqekdirvclvekaAQIGAHTlsgACLDPAA 122
Cdd:PRK07494   9 DIAVIGGGPAGLAAAIAL-------------------ARAGASV---ALVAPEP 40
PRK07804 PRK07804
L-aspartate oxidase; Provisional
 66-107 9.34e-03

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 38.80  E-value: 9.34e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 52138635   66 EEADVVIVGAGPAGLSAAIRLKqlaaeqEKDIRVCLVEKAAQ 107
Cdd:PRK07804  15 DAADVVVVGSGVAGLTAALAAR------RAGRRVLVVTKAAL 50
Tdh COG1063
Threonine dehydrogenase or related Zn-dependent dehydrogenase [Amino acid transport and ...
 56-112 9.93e-03

Threonine dehydrogenase or related Zn-dependent dehydrogenase [Amino acid transport and metabolism, General function prediction only]; Threonine dehydrogenase or related Zn-dependent dehydrogenase is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 440683 [Multi-domain]  Cd Length: 341  Bit Score: 38.58  E-value: 9.93e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52138635  56 WEGVNMERFAEEADVVIVGAGPAGLSAAIRLKQLAAEqekdiRVCLV-------EKAAQIGAHT 112
Cdd:COG1063 151 LHAVERAGVKPGDTVLVIGAGPIGLLAALAARLAGAA-----RVIVVdrnperlELARELGADA 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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