C-type lectin domain family 7 member A isoform f [Homo sapiens]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Ly49 super family | cl07131 | Ly49-like protein, N-terminal region; The sequences making up this family are annotated as, or ... |
40-67 | 2.92e-09 | ||
Ly49-like protein, N-terminal region; The sequences making up this family are annotated as, or are similar to, Ly49 receptors. These are type II transmembrane receptors expressed by mouse natural killer (NK) cells. They are classified as being activating (e.g.Ly49D and H) or inhibitory (e.g. Ly49A and G), depending on their effect on NK cell function. They are members of the C-type lectin receptor superfamily, and in fact in many family members this region is found immediately N-terminal to a lectin C-type domain (pfam00059). The actual alignment was detected with superfamily member pfam08391: Pssm-ID: 462461 [Multi-domain] Cd Length: 119 Bit Score: 49.28 E-value: 2.92e-09
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| Ly49 | pfam08391 | Ly49-like protein, N-terminal region; The sequences making up this family are annotated as, or ... |
40-67 | 2.92e-09 | ||
Ly49-like protein, N-terminal region; The sequences making up this family are annotated as, or are similar to, Ly49 receptors. These are type II transmembrane receptors expressed by mouse natural killer (NK) cells. They are classified as being activating (e.g.Ly49D and H) or inhibitory (e.g. Ly49A and G), depending on their effect on NK cell function. They are members of the C-type lectin receptor superfamily, and in fact in many family members this region is found immediately N-terminal to a lectin C-type domain (pfam00059). Pssm-ID: 462461 [Multi-domain] Cd Length: 119 Bit Score: 49.28 E-value: 2.92e-09
|
||||||
| JMTM_Notch | cd21701 | juxtamembrane and transmembrane (JMTM) domain found in Notch protein family; Neurogenic locus ... |
29-71 | 2.50e-03 | ||
juxtamembrane and transmembrane (JMTM) domain found in Notch protein family; Neurogenic locus notch homolog (Notch) proteins are a family of type-1 transmembrane proteins that form a core component of the Notch signaling pathway. They operate in a variety of different tissues and play a role in a variety of developmental processes by controlling cell fate decisions. The model corresponds to the juxtamembrane and transmembrane (JMTM) domain of Notch proteins, which comprises an extended coil, a transmembrane helix (TM), and a beta-strand. Pssm-ID: 411984 Cd Length: 85 Bit Score: 33.12 E-value: 2.50e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| Ly49 | pfam08391 | Ly49-like protein, N-terminal region; The sequences making up this family are annotated as, or ... |
40-67 | 2.92e-09 | ||
Ly49-like protein, N-terminal region; The sequences making up this family are annotated as, or are similar to, Ly49 receptors. These are type II transmembrane receptors expressed by mouse natural killer (NK) cells. They are classified as being activating (e.g.Ly49D and H) or inhibitory (e.g. Ly49A and G), depending on their effect on NK cell function. They are members of the C-type lectin receptor superfamily, and in fact in many family members this region is found immediately N-terminal to a lectin C-type domain (pfam00059). Pssm-ID: 462461 [Multi-domain] Cd Length: 119 Bit Score: 49.28 E-value: 2.92e-09
|
||||||
| JMTM_Notch | cd21701 | juxtamembrane and transmembrane (JMTM) domain found in Notch protein family; Neurogenic locus ... |
29-71 | 2.50e-03 | ||
juxtamembrane and transmembrane (JMTM) domain found in Notch protein family; Neurogenic locus notch homolog (Notch) proteins are a family of type-1 transmembrane proteins that form a core component of the Notch signaling pathway. They operate in a variety of different tissues and play a role in a variety of developmental processes by controlling cell fate decisions. The model corresponds to the juxtamembrane and transmembrane (JMTM) domain of Notch proteins, which comprises an extended coil, a transmembrane helix (TM), and a beta-strand. Pssm-ID: 411984 Cd Length: 85 Bit Score: 33.12 E-value: 2.50e-03
|
||||||
| Blast search parameters | ||||
|
