|
Name |
Accession |
Description |
Interval |
E-value |
| SpoU-like_RNMTL1 |
cd18106 |
SAM-dependent rRNA methylase related to RNMTL1; RNMTL1 (also known as HC90, MRM3 and RMTL1) ... |
210-400 |
1.31e-82 |
|
SAM-dependent rRNA methylase related to RNMTL1; RNMTL1 (also known as HC90, MRM3 and RMTL1) catalyzes the methylation of 2'-O-ribose residues G1370 to GmG residue of the mitochondrial 16S rRNA. RNMTL1 is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349979 Cd Length: 148 Bit Score: 249.86 E-value: 1.31e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVNNVEWETVPNHLPPDTRVYVADN 289
Cdd:cd18106 1 LTVICDNIRDPGNLGSILRSAAAAGCSKVLLTKGCVDPWEPKVLRAGAGAHFRLPIYGNLSWDDIPNYLPDDSKVFLADN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 290 cghyaqvqmsdktgdrdwacdrrflkfhkyeedldtktrkdwlpKLEVQSYD-LDWTGAPAAVVIGGETHGVSLESLQLA 368
Cdd:cd18106 81 --------------------------------------------NLPVQPYDsIDYCSGPIVLVIGGETHGVSPEAYKLA 116
|
170 180 190
....*....|....*....|....*....|..
gi 166197675 369 ESTGGKRLLIPVVPGVDSLNSAMAASILLFEG 400
Cdd:cd18106 117 HSTGGSRVHIPLANGVDSLNSAVAASILLFEM 148
|
|
| SpoU |
COG0566 |
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA ... |
112-407 |
3.62e-55 |
|
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA G18 (ribose-2'-O)-methylase SpoU is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440332 [Multi-domain] Cd Length: 265 Bit Score: 183.47 E-value: 3.62e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 112 KSRPFREKQGKILLEGRRLIADALKAGAVPKAFFFS--RLEYVKELpVDKLK--DVSLIKVKFEDIKDWSDLVTPQGIMG 187
Cdd:COG0566 16 RDKKYREEEGLFLAEGRHAVEEALKAGREIEELLVTegALDRLAEL-LALAKaaGIPVYEVSREVLDKLSGTETHQGVLA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 188 IFAKPDPVKMTYPETPLHHTlPLVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVn 267
Cdd:COG0566 95 VVRPPEYADLEDLLAEAGEP-PLLLVLDGVQDPGNLGAILRSAAAFGVDGVILPKRRADPYNPKVVRASAGALFHVPVA- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 268 nvewetvpnhlppdtRVyvadncghyaqvqmsdktgdRDWACDRRFLKFHKY---------EEDLdtktrkdwlpklevq 338
Cdd:COG0566 173 ---------------RV--------------------TNLADALEELKEAGFwvvgtdldgEASL--------------- 202
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 166197675 339 sYDLDWTGaPAAVVIGGETHGVSLESLQLAEstggKRLLIPVVPGVDSLNSAMAASILLFEGKRQLRIK 407
Cdd:COG0566 203 -YEVDLPG-PVALVLGNEGKGLSRLVLEACD----ELVRIPMAGGVESLNVAVAAAILLYEAARQRRAK 265
|
|
| SpoU_methylase |
pfam00588 |
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet. |
209-398 |
4.50e-28 |
|
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.
Pssm-ID: 425768 Cd Length: 142 Bit Score: 107.62 E-value: 4.50e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 209 PLVLICDNLRDPGNLGTILRSAAGAGCSKVLLTK-GCVDAWEPKVLRAGMGAHFQVPIVNNVEWETVPNHLPP-DTRVYV 286
Cdd:pfam00588 1 PLVVVLDNIQDPGNLGAIIRTAAAFGADGLILVEpRSADPYNPKAIRASAGALFHLPLVVVDNLEEALKDLKEaGYAVVA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 287 ADncghyaqvqmsdkTGDRDWacdrrflkfhkyeedldtktrkdwlpklevqsYDLDWTGaPAAVVIGGETHGVSLESLQ 366
Cdd:pfam00588 81 TS-------------LGGKSL--------------------------------YEIDFPK-KVALVFGNEGTGLSNEVLE 114
|
170 180 190
....*....|....*....|....*....|..
gi 166197675 367 LAEstggKRLLIPVVPGVDSLNSAMAASILLF 398
Cdd:pfam00588 115 LCD----RLVRIPMSGDVESLNVAVAAAIALY 142
|
|
| rRNA_methyl_3 |
TIGR00186 |
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases ... |
209-404 |
2.82e-13 |
|
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases [Protein synthesis, tRNA and rRNA base modification]
Pssm-ID: 129290 [Multi-domain] Cd Length: 237 Bit Score: 68.91 E-value: 2.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 209 PLVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVnnveweTVPNHLPPDTR----- 283
Cdd:TIGR00186 90 PFLLILDEITDPHNLGAILRTAEAFGVDGVILPKRRSAPLNSTVVKTSSGAVEYVPLA------RVTNLSRTITKlkesg 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 284 --VYVADncghyaqvqmsdktGDRDWAcdrrflkfhKYEEDLDtktrkdwlpklevqsydldwtgAPAAVVIGGETHGVS 361
Cdd:TIGR00186 164 fwTVGTD--------------LDAQDT---------LYQVKLT----------------------KPLALVVGNEGEGVS 198
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 166197675 362 LESLQLAEStggkRLLIPVVPGVDSLNSAMAASILLFEGKRQL 404
Cdd:TIGR00186 199 RLIKENCDF----LIKIPMAGKVDSLNVSVAAGILLFEIKRQR 237
|
|
| SpoU_sub_bind |
smart00967 |
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose ... |
125-191 |
1.93e-08 |
|
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Pssm-ID: 214943 [Multi-domain] Cd Length: 70 Bit Score: 50.61 E-value: 1.93e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 125 LEGRRLIADALKAGAVPKAFFFSRLEYVKELPVDKL---KDVSLIKVKFEDIKDWSDLVTPQGIMGIFAK 191
Cdd:smart00967 1 IEGRHAVEEALKSGRRIKELYLTEGRAERLKELLKLakeRGIKVIEVSKKELDKLSGTANHQGVVAVVKP 70
|
|
| PRK11081 |
PRK11081 |
tRNA guanosine-2'-O-methyltransferase; Provisional |
341-403 |
1.47e-07 |
|
tRNA guanosine-2'-O-methyltransferase; Provisional
Pssm-ID: 236837 [Multi-domain] Cd Length: 229 Bit Score: 51.92 E-value: 1.47e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166197675 341 DLDWTgAPAAVVIGGETHGVSLESLQLAEstggKRLLIPVVPGVDSLNSAMAASILLFEGKRQ 403
Cdd:PRK11081 107 EIDYT-RPTCILMGQEKTGISQEALALAD----QDIIIPMIGMVQSLNVSVASALILYEAQRQ 164
|
|
| TrmL |
COG0219 |
tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ... |
220-404 |
4.97e-07 |
|
tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]; tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 439989 Cd Length: 153 Bit Score: 48.88 E-value: 4.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 220 PGNLGTILRSAAGAGCsKVLLTKGCVDAWEPKVL-RAGMGAHFQVPIVNNVEWETVPNHLPPDtRVYVADNCG--HYAQV 296
Cdd:COG0219 12 PQNTGNIIRLCAATGA-RLHLIEPLGFSLDDKKLkRAGLDYWELVDLTVHDSWEAFLEALPGG-RLFLFTTKGtkPYTDV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 297 QmsdktgdrdwacdrrflkfhkYEEDldtktrkDWLpklevqsydldwtgapaavVIGGETHGVSLEslqLAESTGGKRL 376
Cdd:COG0219 90 D---------------------YQPG-------DVL-------------------LFGRETAGLPEE---VLAAPADQRL 119
|
170 180
....*....|....*....|....*...
gi 166197675 377 LIPVVPGVDSLNSAMAASILLFEGKRQL 404
Cdd:COG0219 120 RIPMRPGVRSLNLSNAVAIVLYEALRQL 147
|
|
| SpoU_sub_bind |
pfam08032 |
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose ... |
124-192 |
2.85e-03 |
|
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Pssm-ID: 429793 [Multi-domain] Cd Length: 74 Bit Score: 36.45 E-value: 2.85e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166197675 124 LLEGRRLIADALKAGAVPKAFFFSRLEYVKEL-PVDKL---KDVSLIKVKFEDIKDWSDLVTPQGIMGIFAKP 192
Cdd:pfam08032 1 LIYGRHAVLEALKSGPEIKKLYLTEGRRDPRLkELLKLakeRGIKVEEVDRKKLDKLSGTANHQGVVAEVKPY 73
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SpoU-like_RNMTL1 |
cd18106 |
SAM-dependent rRNA methylase related to RNMTL1; RNMTL1 (also known as HC90, MRM3 and RMTL1) ... |
210-400 |
1.31e-82 |
|
SAM-dependent rRNA methylase related to RNMTL1; RNMTL1 (also known as HC90, MRM3 and RMTL1) catalyzes the methylation of 2'-O-ribose residues G1370 to GmG residue of the mitochondrial 16S rRNA. RNMTL1 is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349979 Cd Length: 148 Bit Score: 249.86 E-value: 1.31e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVNNVEWETVPNHLPPDTRVYVADN 289
Cdd:cd18106 1 LTVICDNIRDPGNLGSILRSAAAAGCSKVLLTKGCVDPWEPKVLRAGAGAHFRLPIYGNLSWDDIPNYLPDDSKVFLADN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 290 cghyaqvqmsdktgdrdwacdrrflkfhkyeedldtktrkdwlpKLEVQSYD-LDWTGAPAAVVIGGETHGVSLESLQLA 368
Cdd:cd18106 81 --------------------------------------------NLPVQPYDsIDYCSGPIVLVIGGETHGVSPEAYKLA 116
|
170 180 190
....*....|....*....|....*....|..
gi 166197675 369 ESTGGKRLLIPVVPGVDSLNSAMAASILLFEG 400
Cdd:cd18106 117 HSTGGSRVHIPLANGVDSLNSAVAASILLFEM 148
|
|
| SpoU |
COG0566 |
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA ... |
112-407 |
3.62e-55 |
|
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA G18 (ribose-2'-O)-methylase SpoU is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440332 [Multi-domain] Cd Length: 265 Bit Score: 183.47 E-value: 3.62e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 112 KSRPFREKQGKILLEGRRLIADALKAGAVPKAFFFS--RLEYVKELpVDKLK--DVSLIKVKFEDIKDWSDLVTPQGIMG 187
Cdd:COG0566 16 RDKKYREEEGLFLAEGRHAVEEALKAGREIEELLVTegALDRLAEL-LALAKaaGIPVYEVSREVLDKLSGTETHQGVLA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 188 IFAKPDPVKMTYPETPLHHTlPLVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVn 267
Cdd:COG0566 95 VVRPPEYADLEDLLAEAGEP-PLLLVLDGVQDPGNLGAILRSAAAFGVDGVILPKRRADPYNPKVVRASAGALFHVPVA- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 268 nvewetvpnhlppdtRVyvadncghyaqvqmsdktgdRDWACDRRFLKFHKY---------EEDLdtktrkdwlpklevq 338
Cdd:COG0566 173 ---------------RV--------------------TNLADALEELKEAGFwvvgtdldgEASL--------------- 202
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 166197675 339 sYDLDWTGaPAAVVIGGETHGVSLESLQLAEstggKRLLIPVVPGVDSLNSAMAASILLFEGKRQLRIK 407
Cdd:COG0566 203 -YEVDLPG-PVALVLGNEGKGLSRLVLEACD----ELVRIPMAGGVESLNVAVAAAILLYEAARQRRAK 265
|
|
| SpoU-like_rRNA-MTase |
cd18095 |
SAM-dependent rRNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes ... |
210-399 |
1.27e-45 |
|
SAM-dependent rRNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349968 Cd Length: 143 Bit Score: 154.12 E-value: 1.27e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVNNVEWETVPNHLPP-DTRVYVAD 288
Cdd:cd18095 1 LVLVLDGVQDPGNLGTIIRTAAAFGVDGVILSKGTVDPYNPKVVRASMGALFRLPIIRVDDLEELLEELKEaGYKVVAAD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 289 ncghyaqvqmsdktgdrdwacdrrflkfhkyeedldtktrkdwlPKLEVQSYDLDWTGaPAAVVIGGETHGVSLESLQLA 368
Cdd:cd18095 81 --------------------------------------------LDGGSSLYDLDLPK-PVALVLGNEGNGLSDELLELC 115
|
170 180 190
....*....|....*....|....*....|.
gi 166197675 369 EstggKRLLIPVVPGVDSLNSAMAASILLFE 399
Cdd:cd18095 116 D----KRVTIPMSGGVESLNVAVAAAILLYE 142
|
|
| SpoU-like_RNA-MTase |
cd18104 |
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes ... |
210-403 |
1.87e-29 |
|
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349977 Cd Length: 146 Bit Score: 111.52 E-value: 1.87e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVNNVEWETVpnhlppdtrvyvadn 289
Cdd:cd18104 1 LILVLEGLEKPGNLGAILRSADAAGADAVILCDPKTDLFNPNVIRASLGAVFTLPVAEASSEETL--------------- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 290 cghyaqvqmsdktgdrdwacdrRFLKFHKYEEDLDTktrkdwlPKLEVQSYDLDWTGaPAAVVIGGETHGVSLESLQLAe 369
Cdd:cd18104 66 ----------------------AWLKENKIRILATT-------PKAEKLYYEADLRG-PIAIVVGSESEGLSEFWLKAA- 114
|
170 180 190
....*....|....*....|....*....|....
gi 166197675 370 stgGKRLLIPVVPGVDSLNSAMAASILLFEGKRQ 403
Cdd:cd18104 115 ---DERVRIPMAGQADSLNVSVAAAILLYEALRQ 145
|
|
| SpoU_methylase |
pfam00588 |
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet. |
209-398 |
4.50e-28 |
|
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.
Pssm-ID: 425768 Cd Length: 142 Bit Score: 107.62 E-value: 4.50e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 209 PLVLICDNLRDPGNLGTILRSAAGAGCSKVLLTK-GCVDAWEPKVLRAGMGAHFQVPIVNNVEWETVPNHLPP-DTRVYV 286
Cdd:pfam00588 1 PLVVVLDNIQDPGNLGAIIRTAAAFGADGLILVEpRSADPYNPKAIRASAGALFHLPLVVVDNLEEALKDLKEaGYAVVA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 287 ADncghyaqvqmsdkTGDRDWacdrrflkfhkyeedldtktrkdwlpklevqsYDLDWTGaPAAVVIGGETHGVSLESLQ 366
Cdd:pfam00588 81 TS-------------LGGKSL--------------------------------YEIDFPK-KVALVFGNEGTGLSNEVLE 114
|
170 180 190
....*....|....*....|....*....|..
gi 166197675 367 LAEstggKRLLIPVVPGVDSLNSAMAASILLF 398
Cdd:pfam00588 115 LCD----RLVRIPMSGDVESLNVAVAAAIALY 142
|
|
| SpoU-like_RNA-MTase |
cd18109 |
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes ... |
210-399 |
2.20e-27 |
|
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349982 Cd Length: 141 Bit Score: 106.08 E-value: 2.20e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVNNVEWETVPNHlPPDTRVYVADN 289
Cdd:cd18109 1 LTLALDGIQDPGNLGTIIRTADWFGIRQIICSPDTVDPYNPKVVQASMGSIFRVQIHYTDLPALLAEL-KKAFPVYGADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 290 CGHYAqvqmsdktgdrdwacdrrflkfhkYEEDLDTktrkdwlpklevqsydldwtgaPAAVVIGGETHGVSLESLQLAE 369
Cdd:cd18109 80 DGENL------------------------YEFTLPE----------------------KGILVMGNEGHGISPEVLKLLT 113
|
170 180 190
....*....|....*....|....*....|.
gi 166197675 370 stggKRLLIPVVP-GVDSLNSAMAASILLFE 399
Cdd:cd18109 114 ----HRLTIPRYGkGAESLNVAVATAILLSE 140
|
|
| SpoU-like_family |
cd18082 |
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase ... |
211-399 |
7.36e-23 |
|
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349955 Cd Length: 145 Bit Score: 93.83 E-value: 7.36e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 211 VLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPI--VNNVEwETVPNHLPPDTRVYVAd 288
Cdd:cd18082 1 HLVLDNIRSPGNIGSIFRTADAFGVEKIYLVGPTADIFDPKAKRTSRGTHFSVPYerVDNFE-EYLKSLKEEGYPLIGL- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 289 ncghyaqvqMSDKTGDRdwacdrrflkfhkyeedldtktrkdwlpkleVQSYDLDWTGaPAAVVIGGETHGVSLESLQLA 368
Cdd:cd18082 79 ---------ELTDGSIP-------------------------------LSEFKFKKPK-KIALIFGNERSGLSPELLALC 117
|
170 180 190
....*....|....*....|....*....|.
gi 166197675 369 EstggKRLLIPVVPGVDSLNSAMAASILLFE 399
Cdd:cd18082 118 D----YTVHIPMSGKNSSLNVSVATGIALYE 144
|
|
| SpoU-like_AviRb |
cd18107 |
SAM-dependent rRNA methylase related to AviRb; AviRb from Streptomyces viridochromogenes ... |
210-399 |
2.68e-17 |
|
SAM-dependent rRNA methylase related to AviRb; AviRb from Streptomyces viridochromogenes methylates the 2'-O atom of U2479 of the 23S ribosomal RNA. AviRb is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349980 Cd Length: 148 Bit Score: 78.20 E-value: 2.68e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVNnvewetVPNHLPPDTRVYVADN 289
Cdd:cd18107 1 LVVLFDRPTSPGNLGTIIRSADALGAHGLVVTGHAADVYDPKTIRASTGSLFSLPIVR------VPSNRELEDWVEARKA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 290 CGHYAQVQMSDKTGDrdwacdrrflkfhkyeedldtktrkdwlpkleVQSYDLDWTGaPAAVVIGGETHGVSLESLQLAE 369
Cdd:cd18107 75 RGTPLQLVGTDEHGD--------------------------------HQIADHDFTR-PTLLLIGNETAGLSAAWRELCD 121
|
170 180 190
....*....|....*....|....*....|
gi 166197675 370 STGGkrllIPVVPGVDSLNSAMAASILLFE 399
Cdd:cd18107 122 ETVS----IPMAGSASSLNAACAASIFLYE 147
|
|
| SpoU-like_RlmB |
cd18103 |
SAM-dependent rRNA methylase related to RlmB; 23S rRNA-M2G2251-MTase RlmB catalyzes the ... |
210-399 |
6.74e-17 |
|
SAM-dependent rRNA methylase related to RlmB; 23S rRNA-M2G2251-MTase RlmB catalyzes the methylation of guanosine 2251, a modification conserved in the peptidyltransferase domain of 23S rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349976 Cd Length: 143 Bit Score: 77.04 E-value: 6.74e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTK-GCVDAwEPKVLRAGMGAHFQVPI--VNNVE-----------Wetvp 275
Cdd:cd18103 1 LLLILDGITDPHNLGAIIRSAEAFGVDGVIIPKrRSAPL-TPTVAKASAGALEHLPIarVTNLAraleelkeagfW---- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 276 nhlppdtrVYVADncghyaqvqmsdktgdrdwacdrrflkfHKYEEDLdtktrkdwlpklevqsYDLDWTGaPAAVVIGG 355
Cdd:cd18103 76 --------IYGAD----------------------------GEAEKSL----------------YDVDLTG-PLALVLGS 102
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 166197675 356 ETHGVSLESLQLAEstggKRLLIPVVPGVDSLNSAMAASILLFE 399
Cdd:cd18103 103 EGKGLRRLVLKNCD----FLVKIPMAGKVDSLNVSVAAGIILYE 142
|
|
| SpoU-like |
cd18097 |
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase ... |
210-399 |
2.17e-13 |
|
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349970 Cd Length: 144 Bit Score: 67.20 E-value: 2.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLtkgCVDAWEP---KVLRAGMGAHfqvpivNNVEWETVPnHLPPDTRVYV 286
Cdd:cd18097 1 LVVVLDNLRSAHNVGSIFRTADAAGVEKIYL---CGYTPTPphpKVAKTALGAE------ESVPWEHFE-DTLEAVRALK 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 287 ADNcghYAQVQMSDKTGDRDWacdrrflkfhkyeedldtktrkdwlpklevqsYDLDWtGAPAAVVIGGETHGVSLESLQ 366
Cdd:cd18097 71 ARG---YTIIALETTENSVPL--------------------------------HEARL-PRPLALVLGNEVRGVSPEVLA 114
|
170 180 190
....*....|....*....|....*....|...
gi 166197675 367 LAESTggkrLLIPVVPGVDSLNSAMAASILLFE 399
Cdd:cd18097 115 LCDAV----VEIPMFGRKNSLNVAVAAAVALYE 143
|
|
| rRNA_methyl_3 |
TIGR00186 |
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases ... |
209-404 |
2.82e-13 |
|
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases [Protein synthesis, tRNA and rRNA base modification]
Pssm-ID: 129290 [Multi-domain] Cd Length: 237 Bit Score: 68.91 E-value: 2.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 209 PLVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFQVPIVnnveweTVPNHLPPDTR----- 283
Cdd:TIGR00186 90 PFLLILDEITDPHNLGAILRTAEAFGVDGVILPKRRSAPLNSTVVKTSSGAVEYVPLA------RVTNLSRTITKlkesg 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 284 --VYVADncghyaqvqmsdktGDRDWAcdrrflkfhKYEEDLDtktrkdwlpklevqsydldwtgAPAAVVIGGETHGVS 361
Cdd:TIGR00186 164 fwTVGTD--------------LDAQDT---------LYQVKLT----------------------KPLALVVGNEGEGVS 198
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 166197675 362 LESLQLAEStggkRLLIPVVPGVDSLNSAMAASILLFEGKRQL 404
Cdd:TIGR00186 199 RLIKENCDF----LIKIPMAGKVDSLNVSVAAGILLFEIKRQR 237
|
|
| SpoU-like_TrmH |
cd18092 |
SAM-dependent tRNA methylase related to TrmH; TrmH catalyzes the transfer of the methyl group ... |
210-404 |
8.12e-10 |
|
SAM-dependent tRNA methylase related to TrmH; TrmH catalyzes the transfer of the methyl group from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of the ribose of the universally conserved guanosine 18 (G18) position in tRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349965 Cd Length: 162 Bit Score: 57.48 E-value: 8.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLtkgcvdAWEPKVLRAG----MGAHfqvpivnnvEWETVpnHLPPDTrvy 285
Cdd:cd18092 17 LTVVLENVHDPHNASAVLRTCDAFGVQDVHV------IEPKNKFKKNrgvaMGAD---------KWLDV--HRHDST--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 286 vaDNCghYAQVQMSdktGDRDWACDrrflkFHKYEEDLDtktrkdwlpklevqsyDLDWTGaPAAVVIGGETHGVSLESL 365
Cdd:cd18092 77 --EEC--LAALKEQ---GYRIVATS-----LSPDAVPLD----------------ELDYTR-PTALVFGNEKDGVSEEAL 127
|
170 180 190
....*....|....*....|....*....|....*....
gi 166197675 366 QLAEstggKRLLIPVVPGVDSLNSAMAASILLFEGKRQL 404
Cdd:cd18092 128 AAAD----ERVYIPMYGFVESLNVSVAAAIILYELQRQR 162
|
|
| SpoU-like_MRM1 |
cd18105 |
SAM-dependent rRNA methylase related to MRM1; MRM1 catalyzes the methylation of 2'-O-ribose ... |
210-397 |
1.74e-08 |
|
SAM-dependent rRNA methylase related to MRM1; MRM1 catalyzes the methylation of 2'-O-ribose residues G1145 to GmG residue of the mitochondrial 16S rRNA. MRM1 is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349978 Cd Length: 158 Bit Score: 53.29 E-value: 1.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 210 LVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAhfqvpivnnVEwetvpnHLPpdtrVYVADN 289
Cdd:cd18105 1 LWLLLDEITDPQNLGAILRSAYFLGVDGVVVSSKNSAPLSPVVSKASAGA---------LE------LMP----IYSVDN 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 290 CGHYaqVQMSDKTGdrdW----ACDrrflkfhkyeeDLDTKTRKDWLPKLEVQSydlDWTGAPAAVVIGGETHGVSLESL 365
Cdd:cd18105 62 LASF--LKSSKENG---WkvvgTSA-----------PPSASSDKKTIPANELSE---LLLEKPTILVLGNEGRGLRTNIK 122
|
170 180 190
....*....|....*....|....*....|....*..
gi 166197675 366 QLAESTggkrLLIPV-----VPGVDSLNSAMAASILL 397
Cdd:cd18105 123 NLCDYL----VSIPGgrsaeNPGVDSLNVSVAAGILL 155
|
|
| SpoU_sub_bind |
smart00967 |
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose ... |
125-191 |
1.93e-08 |
|
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Pssm-ID: 214943 [Multi-domain] Cd Length: 70 Bit Score: 50.61 E-value: 1.93e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 125 LEGRRLIADALKAGAVPKAFFFSRLEYVKELPVDKL---KDVSLIKVKFEDIKDWSDLVTPQGIMGIFAK 191
Cdd:smart00967 1 IEGRHAVEEALKSGRRIKELYLTEGRAERLKELLKLakeRGIKVIEVSKKELDKLSGTANHQGVVAVVKP 70
|
|
| PRK11081 |
PRK11081 |
tRNA guanosine-2'-O-methyltransferase; Provisional |
341-403 |
1.47e-07 |
|
tRNA guanosine-2'-O-methyltransferase; Provisional
Pssm-ID: 236837 [Multi-domain] Cd Length: 229 Bit Score: 51.92 E-value: 1.47e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166197675 341 DLDWTgAPAAVVIGGETHGVSLESLQLAEstggKRLLIPVVPGVDSLNSAMAASILLFEGKRQ 403
Cdd:PRK11081 107 EIDYT-RPTCILMGQEKTGISQEALALAD----QDIIIPMIGMVQSLNVSVASALILYEAQRQ 164
|
|
| SpoU-like_TrmL |
cd18094 |
SAM-dependent tRNA methylase related to TrmL; tRNA (Um34/Cm34) methyltransferase TrmL ... |
220-404 |
4.22e-07 |
|
SAM-dependent tRNA methylase related to TrmL; tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349967 Cd Length: 145 Bit Score: 48.99 E-value: 4.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 220 PGNLGTILRSAAGAGCSKVLLtkgcvdawEP--------KVLRAGMGAHFQVPIVNNVEWETVPNHLPPDTRVYVAdncg 291
Cdd:cd18094 10 PQNTGNIARTCAATGARLHLI--------EPlgfslddkRLKRAGLDYWDHVDLTVHDSWEAFLEALPPGRLFLFT---- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 292 hyaqvqmsdKTGDRdwacdrRFLKFhKYEEDldtktrkDWLpklevqsydldwtgapaavVIGGETHGVSLEslqLAEST 371
Cdd:cd18094 78 ---------TKGTK------PYTDF-DFKPG-------DYL-------------------VFGRESTGLPEE---ILDAF 112
|
170 180 190
....*....|....*....|....*....|...
gi 166197675 372 GGKRLLIPVVPGVDSLNSAMAASILLFEGKRQL 404
Cdd:cd18094 113 PDRRLRIPMRPKVRSLNLSNSVAIVLYEALRQL 145
|
|
| TrmL |
COG0219 |
tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ... |
220-404 |
4.97e-07 |
|
tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]; tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 439989 Cd Length: 153 Bit Score: 48.88 E-value: 4.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 220 PGNLGTILRSAAGAGCsKVLLTKGCVDAWEPKVL-RAGMGAHFQVPIVNNVEWETVPNHLPPDtRVYVADNCG--HYAQV 296
Cdd:COG0219 12 PQNTGNIIRLCAATGA-RLHLIEPLGFSLDDKKLkRAGLDYWELVDLTVHDSWEAFLEALPGG-RLFLFTTKGtkPYTDV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 297 QmsdktgdrdwacdrrflkfhkYEEDldtktrkDWLpklevqsydldwtgapaavVIGGETHGVSLEslqLAESTGGKRL 376
Cdd:COG0219 90 D---------------------YQPG-------DVL-------------------LFGRETAGLPEE---VLAAPADQRL 119
|
170 180
....*....|....*....|....*...
gi 166197675 377 LIPVVPGVDSLNSAMAASILLFEGKRQL 404
Cdd:COG0219 120 RIPMRPGVRSLNLSNAVAIVLYEALRQL 147
|
|
| PRK11181 |
PRK11181 |
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; |
187-403 |
1.19e-04 |
|
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;
Pssm-ID: 183021 [Multi-domain] Cd Length: 244 Bit Score: 43.42 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 187 GIFAKPDPVKmTYPETPL-----HHTLPLVLICDNLRDPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHF 261
Cdd:PRK11181 69 GIIARVKPGR-QLQENDLpdllaSLEQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAE 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 262 QVPIVnnveweTVPN------HLpPDTRVYVADNCGhyaqvqmsdktgdrdwacdrrflkfhkyEEDLDTktrkdwlpkl 335
Cdd:PRK11181 148 TVPLI------RVTNlartmrML-QEKNIWIVGTAG----------------------------EADHTL---------- 182
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 166197675 336 evqsYDLDWTGaPAAVVIGgethgvsleslqlAESTGGKRLL---------IPVVPGVDSLNSAMAASILLFEGKRQ 403
Cdd:PRK11181 183 ----YQSKLTG-PLALVMG-------------AEGEGMRRLTrehcdelisIPMAGSVSSLNVSVATGICLFEAVRQ 241
|
|
| SpoU-like_TrmJ |
cd18093 |
SAM-dependent tRNA methylase related to TrmJ; tRNA methyltransferase TrmJ catalyzes the methyl ... |
220-399 |
1.68e-03 |
|
SAM-dependent tRNA methylase related to TrmJ; tRNA methyltransferase TrmJ catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 32 in both tRNASer1 and tRNAGln2. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349966 Cd Length: 153 Bit Score: 38.63 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 220 PGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFqvpivnnvewetvpnhlppdtrvyVADNCGHYAQVqmS 299
Cdd:cd18093 11 PGNIGAVARAMKNFGLSDLRLVNPRCDDPEEAARALASGAED------------------------VLENAKVYDTL--E 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166197675 300 DKTGDRDW--ACDRRflKFHKYEEDLDTKTRKDWLPKLEvqsydldwTGAPAAVVIGGETHGVSLESLQLAEstggKRLL 377
Cdd:cd18093 65 EALADCDLvvATTAR--PRGLRRPLLTPRELAELLKEHA--------AGGKVALVFGREDSGLTNEELALCD----LLVT 130
|
170 180
....*....|....*....|..
gi 166197675 378 IPVVPGVDSLNSAMAASILLFE 399
Cdd:cd18093 131 IPTNPEYPSLNLAQAVAIVLYE 152
|
|
| SpoU_sub_bind |
pfam08032 |
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose ... |
124-192 |
2.85e-03 |
|
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Pssm-ID: 429793 [Multi-domain] Cd Length: 74 Bit Score: 36.45 E-value: 2.85e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166197675 124 LLEGRRLIADALKAGAVPKAFFFSRLEYVKEL-PVDKL---KDVSLIKVKFEDIKDWSDLVTPQGIMGIFAKP 192
Cdd:pfam08032 1 LIYGRHAVLEALKSGPEIKKLYLTEGRRDPRLkELLKLakeRGIKVEEVDRKKLDKLSGTANHQGVVAEVKPY 73
|
|
| |
