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Conserved domains on  [gi|34147189|ref|NP_898983|]
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transmembrane protein 252 [Mus musculus]

Protein Classification

TMEM252 domain-containing protein( domain architecture ID 11238829)

TMEM252 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM252 pfam15664
Transmembrane protein 252 family; This family of proteins is found in eukaryotes. Proteins in ...
 28-166 5.67e-94

Transmembrane protein 252 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 152 and 182 amino acids in length. The function is not known.


:

Pssm-ID: 434839  Cd Length: 139  Bit Score: 269.31  E-value: 5.67e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34147189    28 ISNSIFHSQRNLVVAYVLLPMGFVILLSGIFWGTYRQANENKEMFNHVLRQHLAFQDLPLATVDRPDFYPPAYEESLDVE 107
Cdd:pfam15664   1 SSGSIFNCQGNLILAYLLLPLGFVILLSGIFWSTYRQASESKGVFTHVLRQHLAHGALPLATVDRPDFYPPAYEESLDAE 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 34147189   108 KQACPAGRELLGFPPPLYTETNLEFEHLEDPQPEAPPPYQEIIADAGAPAKAQDAEEPS 166
Cdd:pfam15664  81 KQTCPAEGEASDIPPPLYTETGLEFEDENDAHPEAPPSYEESVADLVAAATSEDAERPS 139
 
Name Accession Description Interval E-value
TMEM252 pfam15664
Transmembrane protein 252 family; This family of proteins is found in eukaryotes. Proteins in ...
 28-166 5.67e-94

Transmembrane protein 252 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 152 and 182 amino acids in length. The function is not known.


Pssm-ID: 434839  Cd Length: 139  Bit Score: 269.31  E-value: 5.67e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34147189    28 ISNSIFHSQRNLVVAYVLLPMGFVILLSGIFWGTYRQANENKEMFNHVLRQHLAFQDLPLATVDRPDFYPPAYEESLDVE 107
Cdd:pfam15664   1 SSGSIFNCQGNLILAYLLLPLGFVILLSGIFWSTYRQASESKGVFTHVLRQHLAHGALPLATVDRPDFYPPAYEESLDAE 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 34147189   108 KQACPAGRELLGFPPPLYTETNLEFEHLEDPQPEAPPPYQEIIADAGAPAKAQDAEEPS 166
Cdd:pfam15664  81 KQTCPAEGEASDIPPPLYTETGLEFEDENDAHPEAPPSYEESVADLVAAATSEDAERPS 139
 
Name Accession Description Interval E-value
TMEM252 pfam15664
Transmembrane protein 252 family; This family of proteins is found in eukaryotes. Proteins in ...
 28-166 5.67e-94

Transmembrane protein 252 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 152 and 182 amino acids in length. The function is not known.


Pssm-ID: 434839  Cd Length: 139  Bit Score: 269.31  E-value: 5.67e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34147189    28 ISNSIFHSQRNLVVAYVLLPMGFVILLSGIFWGTYRQANENKEMFNHVLRQHLAFQDLPLATVDRPDFYPPAYEESLDVE 107
Cdd:pfam15664   1 SSGSIFNCQGNLILAYLLLPLGFVILLSGIFWSTYRQASESKGVFTHVLRQHLAHGALPLATVDRPDFYPPAYEESLDAE 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 34147189   108 KQACPAGRELLGFPPPLYTETNLEFEHLEDPQPEAPPPYQEIIADAGAPAKAQDAEEPS 166
Cdd:pfam15664  81 KQTCPAEGEASDIPPPLYTETGLEFEDENDAHPEAPPSYEESVADLVAAATSEDAERPS 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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