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Conserved domains on  [gi|30695633|ref|NP_850963|]
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epithiospecifier protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02153 super family cl31833
epithiospecifier protein
 1-261 0e+00

epithiospecifier protein


The actual alignment was detected with superfamily member PLN02153:

Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 539.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633    1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLDEVGGPEARTFHSMASDENHVYVFGGVSKGGTMNTPTRFRT 80
Cdd:PLN02153  81 MVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRT 160

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   81 IEAYNIADGKWAQLPDPGDNFEKRGGAGFAVVQGKIWVVYGFATSIVPGGKDDYESNAVQFYDPASKKWTEVETTGAKPS 160
Cdd:PLN02153 161 IEAYNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPS 240

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  161 ARSVFAHAVVGKYIIIFAGEVWPDLNGHYGPGTLSNEGYALDTETLVWEKLGEEGAPAIPRGWTAYTAATVDGKNGLLMH 240
Cdd:PLN02153 241 ARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGEPAMPRGWTAYTTATVYGKNGLLMH 320

                        250       260
                 ....*....|....*....|.
gi 30695633  241 GGKLPTNERTDDLYFYAVNSA 261
Cdd:PLN02153 321 GGKLPTNERTDDLYFYAVNSA 341
 
Name Accession Description Interval E-value
PLN02153 PLN02153
epithiospecifier protein
 1-261 0e+00

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 539.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633    1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLDEVGGPEARTFHSMASDENHVYVFGGVSKGGTMNTPTRFRT 80
Cdd:PLN02153  81 MVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRT 160

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   81 IEAYNIADGKWAQLPDPGDNFEKRGGAGFAVVQGKIWVVYGFATSIVPGGKDDYESNAVQFYDPASKKWTEVETTGAKPS 160
Cdd:PLN02153 161 IEAYNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPS 240

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  161 ARSVFAHAVVGKYIIIFAGEVWPDLNGHYGPGTLSNEGYALDTETLVWEKLGEEGAPAIPRGWTAYTAATVDGKNGLLMH 240
Cdd:PLN02153 241 ARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGEPAMPRGWTAYTTATVYGKNGLLMH 320

                        250       260
                 ....*....|....*....|.
gi 30695633  241 GGKLPTNERTDDLYFYAVNSA 261
Cdd:PLN02153 321 GGKLPTNERTDDLYFYAVNSA 341
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
1-234 5.11e-20

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 86.75  E-value: 5.11e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLdevggPEARTFHSMA-SDENHVYVFGGVSKGGTMNTPTrfR 79
Cdd:COG3055  18 AALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPL-----PGPPRHHAAAvAQDGKLYVFGGFTGANPSSTPL--N 90

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  80 TIEAYNIADGKWAQLPDPgdnFEKRGGAGFAVVQGKIWVVYGFAtsivpggkDDYESNAVQFYDPASKKWTEV------- 152
Cdd:COG3055  91 DVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWD--------DGGNVAWVEVYDPATGTWTQLaplptpr 159

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633 153 ----------------------------ETTGAKPSARSVFAHAVVGKYIIIFAGEVWPdlnghygpgtlSNEGYALDTE 204
Cdd:COG3055 160 dhlaaavlpdgkilviggrngsgfsntwTTLAPLPTARAGHAAAVLGGKILVFGGESGF-----------SDEVEAYDPA 228

                       250       260       270
                ....*....|....*....|....*....|
gi 30695633 205 TLVWEKLGEegapaIPRGWTAYTAATVDGK 234
Cdd:COG3055 229 TNTWTALGE-----LPTPRHGHAAVLTDGK 253
Kelch_6 pfam13964
Kelch motif;
47-97 3.84e-07

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 45.79  E-value: 3.84e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 30695633    47 ARTFHSMASDENHVYVFggvskGGTMNTPTRFRTIEAYNIADGKWAQLPDP 97
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVF-----GGYTNASPALNKLEVYNPLTKSWEELPPL 46
Kelch smart00612
Kelch domain;
7-55 3.21e-05

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 40.23  E-value: 3.21e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 30695633      7 KIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLdevggPEARTFHSMAS 55
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSM-----PTPRSGHGVAV 44
 
Name Accession Description Interval E-value
PLN02153 PLN02153
epithiospecifier protein
 1-261 0e+00

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 539.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633    1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLDEVGGPEARTFHSMASDENHVYVFGGVSKGGTMNTPTRFRT 80
Cdd:PLN02153  81 MVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRT 160

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   81 IEAYNIADGKWAQLPDPGDNFEKRGGAGFAVVQGKIWVVYGFATSIVPGGKDDYESNAVQFYDPASKKWTEVETTGAKPS 160
Cdd:PLN02153 161 IEAYNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPS 240

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  161 ARSVFAHAVVGKYIIIFAGEVWPDLNGHYGPGTLSNEGYALDTETLVWEKLGEEGAPAIPRGWTAYTAATVDGKNGLLMH 240
Cdd:PLN02153 241 ARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGEPAMPRGWTAYTTATVYGKNGLLMH 320

                        250       260
                 ....*....|....*....|.
gi 30695633  241 GGKLPTNERTDDLYFYAVNSA 261
Cdd:PLN02153 321 GGKLPTNERTDDLYFYAVNSA 341
PLN02193 PLN02193
nitrile-specifier protein
 1-261 1.67e-103

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 308.81  E-value: 1.67e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633    1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLDEvgGPEARTFHSMASDENHVYVFGGVSkggtmnTPTRFRT 80
Cdd:PLN02193 224 MVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEE--GPTPRSFHSMAADEENVYVFGGVS------ATARLKT 295

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   81 IEAYNIADGKWAQLPDPGDNFEKRGGAGFAVVQGKIWVVYGFatsivpggkDDYESNAVQFYDPASKKWTEVETTGAKPS 160
Cdd:PLN02193 296 LDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGF---------NGCEVDDVHYYDPVQDKWTQVETFGVRPS 366

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  161 ARSVFAHAVVGKYIIIFAGEVWPDLNGHYGPGTLSNEGYALDTETLVWEKL----GEEGAPAIpRGWTAYTAATVDGKNG 236
Cdd:PLN02193 367 ERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLdkfgEEEETPSS-RGWTASTTGTIDGKKG 445

                        250       260
                 ....*....|....*....|....*
gi 30695633  237 LLMHGGKLPTNERTDDLYFYAVNSA 261
Cdd:PLN02193 446 LVMHGGKAPTNDRFDDLFFYGIDSA 470
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
1-234 5.11e-20

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 86.75  E-value: 5.11e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLdevggPEARTFHSMA-SDENHVYVFGGVSKGGTMNTPTrfR 79
Cdd:COG3055  18 AALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPL-----PGPPRHHAAAvAQDGKLYVFGGFTGANPSSTPL--N 90

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  80 TIEAYNIADGKWAQLPDPgdnFEKRGGAGFAVVQGKIWVVYGFAtsivpggkDDYESNAVQFYDPASKKWTEV------- 152
Cdd:COG3055  91 DVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWD--------DGGNVAWVEVYDPATGTWTQLaplptpr 159

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633 153 ----------------------------ETTGAKPSARSVFAHAVVGKYIIIFAGEVWPdlnghygpgtlSNEGYALDTE 204
Cdd:COG3055 160 dhlaaavlpdgkilviggrngsgfsntwTTLAPLPTARAGHAAAVLGGKILVFGGESGF-----------SDEVEAYDPA 228

                       250       260       270
                ....*....|....*....|....*....|
gi 30695633 205 TLVWEKLGEegapaIPRGWTAYTAATVDGK 234
Cdd:COG3055 229 TNTWTALGE-----LPTPRHGHAAVLTDGK 253
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
1-181 6.87e-16

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 75.19  E-value: 6.87e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLdevggPEARTFHSMA-SDENHVYVFGGVSKGGtmntptrfr 79
Cdd:COG3055 117 ALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPL-----PTPRDHLAAAvLPDGKILVIGGRNGSG--------- 182

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  80 tieayniADGKWAQLPDPgdnFEKRGGAGFAVVQGKIWVVygfatsivpGGKDDYeSNAVQFYDPASKKWTeveTTGAKP 159
Cdd:COG3055 183 -------FSNTWTTLAPL---PTARAGHAAAVLGGKILVF---------GGESGF-SDEVEAYDPATNTWT---ALGELP 239

                       170       180
                ....*....|....*....|..
gi 30695633 160 SARSVFAHAVVGKYIIIFAGEV 181
Cdd:COG3055 240 TPRHGHAAVLTDGKVYVIGGET 261
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
45-242 8.23e-15

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 72.11  E-value: 8.23e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  45 PEARTFHSMASDENHVYVFGGVSKGGTMNtptrfrTIEAYNIADGKWAQLPD-PGdnfEKRGGAGFAVVQGKIWVVYGFA 123
Cdd:COG3055  10 PTPRSEAAAALLDGKVYVAGGLSGGSASN------SFEVYDPATNTWSELAPlPG---PPRHHAAAVAQDGKLYVFGGFT 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633 124 TSIVPGGkddyESNAVQFYDPASKKWTEvetTGAKPSARSVFAHAVVGKYIIIFAGevwpdlnghYGPGTLSNEGYALDT 203
Cdd:COG3055  81 GANPSST----PLNDVYVYDPATNTWTK---LAPMPTPRGGATALLLDGKIYVVGG---------WDDGGNVAWVEVYDP 144

                       170       180       190
                ....*....|....*....|....*....|....*....
gi 30695633 204 ETLVWEKLgeegaPAIPRGWTAYTAATVDGKNGLLMhGG 242
Cdd:COG3055 145 ATGTWTQL-----APLPTPRDHLAAAVLPDGKILVI-GG 177
PHA03098 PHA03098
kelch-like protein; Provisional
 2-149 1.04e-10

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 61.32  E-value: 1.04e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633    2 VAVGTKIYIFGGRDENRNFEN-FRSYDTVTSEWTFLTKLDevggpEARTFHSMASDENHVYVFGGVSKGGTMNtptrfrT 80
Cdd:PHA03098 291 VVLNNVIYFIGGMNKNNLSVNsVVSYDTKTKSWNKVPELI-----YPRKNPGVTVFNNRIYVIGGIYNSISLN------T 359

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30695633   81 IEAYNIADGKWAQLPDPgdnFEKRGGAGFAVVQGKIWVVYGFAtsivpggKDDYESNAVQFYDPASKKW 149
Cdd:PHA03098 360 VESWKPGESKWREEPPL---IFPRYNPCVVNVNNLIYVIGGIS-------KNDELLKTVECFSLNTNKW 418
PHA03098 PHA03098
kelch-like protein; Provisional
 8-150 4.97e-08

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 53.23  E-value: 4.97e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633    8 IYIFGGRDEN-RNFENFRSYDTVTSEWTFLTKLdevggPEARTFHSMASDENHVYVFGGVSkggTMNTPTRFRTIEAYNI 86
Cdd:PHA03098 392 IYVIGGISKNdELLKTVECFSLNTNKWSKGSPL-----PISHYGGCAIYHDGKIYVIGGIS---YIDNIKVYNIVESYNP 463

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30695633   87 ADGKWAQLPDPgdNFeKRGGAGFAVVQGKIWVVYGFatsivpggKDDYESNAVQFYDPASKKWT 150
Cdd:PHA03098 464 VTNKWTELSSL--NF-PRINASLCIFNNKIYVVGGD--------KYEYYINEIEVYDDKTNTWT 516
Kelch_6 pfam13964
Kelch motif;
47-97 3.84e-07

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 45.79  E-value: 3.84e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 30695633    47 ARTFHSMASDENHVYVFggvskGGTMNTPTRFRTIEAYNIADGKWAQLPDP 97
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVF-----GGYTNASPALNKLEVYNPLTKSWEELPPL 46
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 1-39 1.73e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 43.75  E-value: 1.73e-06
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 30695633     1 MVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKL 39
Cdd:pfam01344   7 VVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSM 45
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 47-98 1.70e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 41.06  E-value: 1.70e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 30695633    47 ARTFHSMASDENHVYVFGGvskggtMNTPTRFRTIEAYNIADGKWAQLPDPG 98
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGG------FDGNQSLNSVEVYDPETNTWSKLPSMP 46
Kelch smart00612
Kelch domain;
7-55 3.21e-05

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 40.23  E-value: 3.21e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 30695633      7 KIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLdevggPEARTFHSMAS 55
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSM-----PTPRSGHGVAV 44
Kelch_4 pfam13418
Galactose oxidase, central domain;
47-97 7.91e-04

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 36.44  E-value: 7.91e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 30695633    47 ARTFHSMASDENH-VYVFGG-VSKGGTMNTptrfrtIEAYNIADGKWAQLPDP 97
Cdd:pfam13418   1 PRAYHTSTSIPDDtIYLFGGeGEDGTLLSD------LWVFDLSTNEWTRLGSL 47
PHA03098 PHA03098
kelch-like protein; Provisional
 15-179 2.26e-03

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 38.98  E-value: 2.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   15 DENRNFENFRSYDTVTSEWTFLTKLDEVGGPEarTFHSMASDENhVYVFGGVSkggtmNTPTRFRTIEAYNIADGKWAQL 94
Cdd:PHA03098 255 IHITMSIFTYNYITNYSPLSEINTIIDIHYVY--CFGSVVLNNV-IYFIGGMN-----KNNLSVNSVVSYDTKTKSWNKV 326

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   95 PDPGDNfekRGGAGFAVVQGKIWVVYGFATSIVpggkddyeSNAVQFYDPASKKWTEvETTGAKPsaRSVFAHAVVGKYI 174
Cdd:PHA03098 327 PELIYP---RKNPGVTVFNNRIYVIGGIYNSIS--------LNTVESWKPGESKWRE-EPPLIFP--RYNPCVVNVNNLI 392


                 ....*
gi 30695633  175 IIFAG 179
Cdd:PHA03098 393 YVIGG 397
PRK14131 PRK14131
N-acetylneuraminate epimerase;
58-185 2.28e-03

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 38.84  E-value: 2.28e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633   58 NHVYVFGGVSKGGTMNTPTRFRTIEAYNIADGKWAQLPdpgdnfeKR------GGAGFAVVQGKIWVVYGFATSIVPG-- 129
Cdd:PRK14131  85 GKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLD-------TRspvglaGHVAVSLHNGKAYITGGVNKNIFDGyf 157

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695633  130 ------GKDDYESNAV------------QF------YDPASKKWTEVETTGAKPSARSvfAHAVVGKYIIIFAGEVWPDL 185
Cdd:PRK14131 158 edlaaaGKDKTPKDKIndayfdkkpedyFFnkevlsYDPSTNQWKNAGESPFLGTAGS--AVVIKGNKLWLINGEIKPGL 235
Kelch smart00612
Kelch domain;
59-114 3.25e-03

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 34.84  E-value: 3.25e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 30695633     59 HVYVFGGvskggtMNTPTRFRTIEAYNIADGKWAQLPdpgDNFEKRGGAGFAVVQG 114
Cdd:smart00612   1 KIYVVGG------FDGGQRLKSVEVYDPETNKWTPLP---SMPTPRSGHGVAVING 47
Kelch_3 pfam13415
Galactose oxidase, central domain;
7-56 3.63e-03

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 34.57  E-value: 3.63e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 30695633     7 KIYIFGGRDENRNFENFR--SYDTVTSEWtflTKLDEVggPEARTFHSMASD 56
Cdd:pfam13415   3 KLYIFGGLGFDGQTRLNDlyVYDLDTNTW---TQIGDL--PPPRSGHSATYI 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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