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Conserved domains on  [gi|30695843|ref|NP_850746|]
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G-protein gamma subunit 2 [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
G-gamma super family cl47573
GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the ...
 22-100 1.91e-06

GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA. G-gamma likely shares a common origin with the helical N-terminal unit of G-beta. All organizms that posses a G-beta possess a G-gamma.


The actual alignment was detected with superfamily member pfam00631:

Pssm-ID: 459879 [Multi-domain]  Cd Length: 69  Bit Score: 41.56  E-value: 1.91e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695843    22 KHRIQAELKRLEQEARFLEEeleqlekmdNASASCKEFLDSVD--SKPDPLLPETTGPVnATWDQWFEGPKeakrcGCSI 99
Cdd:pfam00631   4 KLKLKREIEQLREELKRERI---------KVSKACEELIDYCEqrSTKDPLLPGVWGPP-AGENPWREDDG-----CCWI 68


                  .
gi 30695843   100 L 100
Cdd:pfam00631  69 L 69
 
Name Accession Description Interval E-value
G-gamma pfam00631
GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the ...
 22-100 1.91e-06

GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA. G-gamma likely shares a common origin with the helical N-terminal unit of G-beta. All organizms that posses a G-beta possess a G-gamma.


Pssm-ID: 459879 [Multi-domain]  Cd Length: 69  Bit Score: 41.56  E-value: 1.91e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695843    22 KHRIQAELKRLEQEARFLEEeleqlekmdNASASCKEFLDSVD--SKPDPLLPETTGPVnATWDQWFEGPKeakrcGCSI 99
Cdd:pfam00631   4 KLKLKREIEQLREELKRERI---------KVSKACEELIDYCEqrSTKDPLLPGVWGPP-AGENPWREDDG-----CCWI 68


                  .
gi 30695843   100 L 100
Cdd:pfam00631  69 L 69
 
Name Accession Description Interval E-value
G-gamma pfam00631
GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the ...
 22-100 1.91e-06

GGL domain; G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA. G-gamma likely shares a common origin with the helical N-terminal unit of G-beta. All organizms that posses a G-beta possess a G-gamma.


Pssm-ID: 459879 [Multi-domain]  Cd Length: 69  Bit Score: 41.56  E-value: 1.91e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695843    22 KHRIQAELKRLEQEARFLEEeleqlekmdNASASCKEFLDSVD--SKPDPLLPETTGPVnATWDQWFEGPKeakrcGCSI 99
Cdd:pfam00631   4 KLKLKREIEQLREELKRERI---------KVSKACEELIDYCEqrSTKDPLLPGVWGPP-AGENPWREDDG-----CCWI 68


                  .
gi 30695843   100 L 100
Cdd:pfam00631  69 L 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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