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Conserved domains on  [gi|30680880|ref|NP_850546|]
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Major facilitator superfamily protein [Arabidopsis thaliana]

Protein Classification

Unc-93 family MFS transporter( domain architecture ID 13023803)

Unc-93 family MFS transporter similar to Arabidopsis thaliana UNC93-like protein 3

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
31-428 2.14e-129

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 379.00  E-value: 2.14e-129
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  31 VHILSISFLLIFLAYGAAQNLETTVNKD-LGTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPS 109
Cdd:cd17338   1 VIILSFGFLLIFLAYSALQNLQTSLHENgLGSISLGILYSSFAVSSFIAPLLVKLLGEKITLVLGGLGYAIFIASNIFPI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 110 WFTMVPASLYLGFAASIIWVGQGTYLTSIARSHatdhglhegsVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGSts 189
Cdd:cd17338  81 WGTLVPASIILGFAAAILWTAQGTYITRISDES----------NIGRNFGIFWSIFQLSQVFGNLISLALLNHSKGSS-- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 190 GTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLDIRMLLIVPLLAYSGLQQAFVWA 269
Cdd:cd17338 149 GTTILFIVFMAIMLVGIILLFFLRGPDNEVITEIESSSVGESMEKKNLFKLPFTLLKDKRFLLLIPLLIYSGLEQTFFSG 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 270 EFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFTSG-LSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPL 348
Cdd:cd17338 229 VFTLIIGTPTTGIARVGYVMAVYGFGDALGSLVAGLLSDWrFGRIVLAVIGAFVHIASLILLFLSGNVTPYGLGGSWLAY 308
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 349 IMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFLFLALK 428
Cdd:cd17338 309 VSAILWGLGDAIFNTQIYALLGSLYENDSESAFAVYKLWQSIATAIAYFLSPYLPLFVKLFVLLALLILLAIFFLFVELK 388
 
Name Accession Description Interval E-value
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
31-428 2.14e-129

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 379.00  E-value: 2.14e-129
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  31 VHILSISFLLIFLAYGAAQNLETTVNKD-LGTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPS 109
Cdd:cd17338   1 VIILSFGFLLIFLAYSALQNLQTSLHENgLGSISLGILYSSFAVSSFIAPLLVKLLGEKITLVLGGLGYAIFIASNIFPI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 110 WFTMVPASLYLGFAASIIWVGQGTYLTSIARSHatdhglhegsVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGSts 189
Cdd:cd17338  81 WGTLVPASIILGFAAAILWTAQGTYITRISDES----------NIGRNFGIFWSIFQLSQVFGNLISLALLNHSKGSS-- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 190 GTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLDIRMLLIVPLLAYSGLQQAFVWA 269
Cdd:cd17338 149 GTTILFIVFMAIMLVGIILLFFLRGPDNEVITEIESSSVGESMEKKNLFKLPFTLLKDKRFLLLIPLLIYSGLEQTFFSG 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 270 EFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFTSG-LSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPL 348
Cdd:cd17338 229 VFTLIIGTPTTGIARVGYVMAVYGFGDALGSLVAGLLSDWrFGRIVLAVIGAFVHIASLILLFLSGNVTPYGLGGSWLAY 308
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 349 IMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFLFLALK 428
Cdd:cd17338 309 VSAILWGLGDAIFNTQIYALLGSLYENDSESAFAVYKLWQSIATAIAYFLSPYLPLFVKLFVLLALLILLAIFFLFVELK 388
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
54-423 9.34e-33

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 127.44  E-value: 9.34e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880    54 TVNKDLGTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPSWFTMVPASLYLGFAASIIWVGQGT 133
Cdd:pfam05978   4 GISAYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAFLWTGQGS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880   134 YLTSIARSHAtdhglhegsvIGVFNGEFWAMFACHQLFGNLITLALLKDGKEG---STSGTTLLMLVFLFSMTLGTILMF 210
Cdd:pfam05978  84 YLSENSTRET----------IERNTSISWAMLQSSLIGGGIFLFIVFQSGGQGdeiSDGQIKLLYSVFTAISIVGIVVFA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880   211 FIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPlldiRMLLIVPLLAYSGLQQAFVWA------EFTKEIVT-----PA 279
Cdd:pfam05978 154 FLPSPDYENVLSSKEKIQSFADQFKSTFRLLRTP----KMLLLAVFFFYTGLEVSFWTSiyptciSFTSKLGTnttylIA 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880   280 IGVSGVGGAMAVYGALDAVCSMTAGRFtsGLSSITFIvsgGAVAQASVFLWLLLGYRQTSGVLGTAYP-----------L 348
Cdd:pfam05978 230 IYSISTGLGQIIGGIFFGPLGKRIRKF--GRDPTILL---GTLLHLVYFILIYLSFPNDAPLHPTDGPgllitpslylaF 304
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30680880   349 IMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFL 423
Cdd:pfam05978 305 IISFLLGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
64-425 1.55e-03

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 40.61  E-value: 1.55e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  64 LGILYVSFMFCSMVASLVVRLMGSKNALVLG----TTGYWLFVAAnlkPSWFTMVPASLYLGFAASIIWVGQGTYLTSIA 139
Cdd:COG0738  49 LFAFFLGYLLASLPAGRLIDRFGYKRGLLLGlllmALGLLLFALA---PSYPLLLLALFLLGLGLGLLDVAANPYVAALG 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 140 RSHATdhglhegSVIGVFNgefwAMFACHQLFGNLITLALLKDGKEGSTSGTTLLMLVFLFSMTLGTILMFFIRKIDGED 219
Cdd:COG0738 126 PETAA-------SRLNLLH----AFFSLGALLGPLLGGLLILLGLSLSWHLPYLILAVLLLLLALLFLRSKLPEIEEEEE 194
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 220 GKGPVGSPVGlvdSLASLPRMIitplldirmLLIVPLLAYSGLQQAF-VWaeftkeIVTPAIGVSGVGGAMAVYGALDAV 298
Cdd:COG0738 195 EAAGSAASLK---SLLKNPRLL---------LGGLAIFLYVGAEGAIgDW------LPLYLKDVLGLSEATAALGLSLFW 256
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 299 CSMTAGRFTSG-----LSSITFIVSGGAVAQASVFLWLLLGYRQTSgvlgtaypLIMAAILGIGDGILNTQISALLALLF 373
Cdd:COG0738 257 GGMTIGRFLGGfllkrFGPVRLLRLSALLAAVGLLLALLAPGPWLA--------LIGLALVGLGLSLMFPTIFSLALDGL 328
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 30680880 374 KHDTEGAFAQLKVWQSAAIAIVF----FLSPYISLQAMLIVMLVMVCVSLFSFLFL 425
Cdd:COG0738 329 GKRTAAAVSAVLIMGIVGGAIGPpligFLADAFGLRAAFLVPLVCYLLILLLALAL 384
 
Name Accession Description Interval E-value
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
31-428 2.14e-129

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 379.00  E-value: 2.14e-129
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  31 VHILSISFLLIFLAYGAAQNLETTVNKD-LGTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPS 109
Cdd:cd17338   1 VIILSFGFLLIFLAYSALQNLQTSLHENgLGSISLGILYSSFAVSSFIAPLLVKLLGEKITLVLGGLGYAIFIASNIFPI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 110 WFTMVPASLYLGFAASIIWVGQGTYLTSIARSHatdhglhegsVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGSts 189
Cdd:cd17338  81 WGTLVPASIILGFAAAILWTAQGTYITRISDES----------NIGRNFGIFWSIFQLSQVFGNLISLALLNHSKGSS-- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 190 GTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLDIRMLLIVPLLAYSGLQQAFVWA 269
Cdd:cd17338 149 GTTILFIVFMAIMLVGIILLFFLRGPDNEVITEIESSSVGESMEKKNLFKLPFTLLKDKRFLLLIPLLIYSGLEQTFFSG 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 270 EFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFTSG-LSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPL 348
Cdd:cd17338 229 VFTLIIGTPTTGIARVGYVMAVYGFGDALGSLVAGLLSDWrFGRIVLAVIGAFVHIASLILLFLSGNVTPYGLGGSWLAY 308
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 349 IMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFLFLALK 428
Cdd:cd17338 309 VSAILWGLGDAIFNTQIYALLGSLYENDSESAFAVYKLWQSIATAIAYFLSPYLPLFVKLFVLLALLILLAIFFLFVELK 388
MFS_unc93A_like cd17406
Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of ...
33-424 6.69e-72

Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Caenorhabditis elegans Uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93), human protein unc-93 homolog A (HmUnc-93A or UNC93A), and similar proteins. Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. This unc93A-like subfamily belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340964 [Multi-domain]  Cd Length: 390  Bit Score: 231.37  E-value: 6.69e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  33 ILSISFLLIFLAYGAAQNLETTVNKD--LGTISLGILYVSFMFCSM-VASLVVRLMGSKNALVLGTTGYWLFVAANLKPS 109
Cdd:cd17406   3 VISFAFLLLFTAFQGLQNLQSSLNSDdgLGVVSLSVIYASLIVSCMfLPPLLIKKLGCKWTIVLSMFCYVLYIAANFYPS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 110 WFTMVPASLYLGFAASIIWVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLALLKDGKegsts 189
Cdd:cd17406  83 WYTLIPASIILGFGAAPLWSAKCTYLTESGNRYAKLTGKSGDDVINRFFGIFFMIFQSSQIWGNLISSLVFSQSL----- 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 190 gTTLLMLVFLFSMTLGTILM-FFIRKIDGeDGKGPVGSPVGLVDSLASLprmIITPLLDIRMLLIVPLLAYSGLQQAFVW 268
Cdd:cd17406 158 -IYTLLGIYLGCGILAVIIVaVFLDPLKR-DKEKRKQETKFSVLSLLLA---TFKHLKDPRQLLLIPLTIYSGLEQAFLS 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 269 AEFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFTSGLSSITFIVSgGAVAQASVFLWLLLGYRQTSGVlgtAYPL 348
Cdd:cd17406 233 GDFTKSYVTCALGIWNVGYVMICFGVVNALCSFLFGRLVKYTGRIPLFAL-GALVNLGLIIALLLWEPDPDQL---AIFF 308
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30680880 349 IMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFLF 424
Cdd:cd17406 309 VFAGLWGMADAVWQTQINALYGVLFPKNKEAAFSNYRLWESLGFVIAFAYSNFLCVYVKLYILLAVLLLGMVGYGV 384
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
31-425 3.48e-34

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 131.61  E-value: 3.48e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  31 VHILSISFLLIFLAYGAAQNLETTVNKDL----------GTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWL 100
Cdd:cd17407   1 VIILGVAFMFIFTAFQTCGNIEQTVIKSLnqgnttfhgsGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 101 FVAANLKPSWFTMVPASLYLGFAASIIWVGQGTYLTSIArshatdhglhEGSVIGVFNGEFWAMFACHQLFGNLITLALL 180
Cdd:cd17407  81 FIASFIQPMTWSLYTASVLLGIGAAVLWTGQGNFLTINS----------DSETIGRNSGIFWALLQCSLLFGNLYVYFAF 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 181 KDGKEGSTSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKgpvgspvglvdslaslprmiitplldirMLLIVPLLAYS 260
Cdd:cd17407 151 QGKTTISDHDRRTVFIVLTVISLVGVVLLFLLRKPPSEPKE----------------------------MLLLSVTFAYT 202
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 261 GLQQAFVWA------EFTKEIVTPA---IGVSGV---------GGAMAVYGA------------LDAVCSMTA------- 303
Cdd:cd17407 203 GLELTFFSGvygtciGNTNKFGEDAkslIGLSGIfigigeilgGGLFGILGKktnrfgrdpivlLGFVVHLIAfylifln 282
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 304 ----GRFTSGLSSITFIVSGGAVAQASVFLwlllgyrqtsgvlgtayplimaaiLGIGDGILNTQISALLALLFKHDTEG 379
Cdd:cd17407 283 ipsdAPIAEGTNDSAYIEPSAYVALFCSFL------------------------LGFGDSCFNTQIYSILGFMYPEDSAP 338
                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*.
gi 30680880 380 AFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFLFL 425
Cdd:cd17407 339 AFALFKFVQSIAAAIAFFYSNYLLLQWQLLILVVFGFLGTISFFLV 384
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
54-423 9.34e-33

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 127.44  E-value: 9.34e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880    54 TVNKDLGTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPSWFTMVPASLYLGFAASIIWVGQGT 133
Cdd:pfam05978   4 GISAYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAFLWTGQGS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880   134 YLTSIARSHAtdhglhegsvIGVFNGEFWAMFACHQLFGNLITLALLKDGKEG---STSGTTLLMLVFLFSMTLGTILMF 210
Cdd:pfam05978  84 YLSENSTRET----------IERNTSISWAMLQSSLIGGGIFLFIVFQSGGQGdeiSDGQIKLLYSVFTAISIVGIVVFA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880   211 FIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPlldiRMLLIVPLLAYSGLQQAFVWA------EFTKEIVT-----PA 279
Cdd:pfam05978 154 FLPSPDYENVLSSKEKIQSFADQFKSTFRLLRTP----KMLLLAVFFFYTGLEVSFWTSiyptciSFTSKLGTnttylIA 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880   280 IGVSGVGGAMAVYGALDAVCSMTAGRFtsGLSSITFIvsgGAVAQASVFLWLLLGYRQTSGVLGTAYP-----------L 348
Cdd:pfam05978 230 IYSISTGLGQIIGGIFFGPLGKRIRKF--GRDPTILL---GTLLHLVYFILIYLSFPNDAPLHPTDGPgllitpslylaF 304
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30680880   349 IMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFL 423
Cdd:pfam05978 305 IISFLLGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
MFS_unc93B1 cd17408
Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 ...
80-429 2.79e-11

Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 homolog B1 (UNC93B1) controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. It regulates differential transport of TLR7 and TLR9 into signaling endosomes to prevent autoimmunity. UNC93B1 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340966 [Multi-domain]  Cd Length: 456  Bit Score: 65.19  E-value: 2.79e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  80 LVVRLMGSKNALVLGTTGYWLFVAANLKPSWFTMVPASLYLGFAASIIWVGQGTYLTSIAR-----SHATDHGLHE---- 150
Cdd:cd17408  65 VLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVAIGVAIVPLWASMGNYITRMAQkyyeyVNYKEEDVQEqkrp 144
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 151 -----GSVIGVFNGEFWAMFACHQLFGNLITLALLKD-----------------GKEGSTSG-----------TTLLMLV 197
Cdd:cd17408 145 prgayHKYIIIFQSVFYAIFHLSFVCAQLPMIFFLNNylydynhtlynvkhcgaQSKGILEGfnktvlitlprSLNLIIV 224
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 198 FLFSMTLGTILMFFIRKIDGEDGKgpvgsPVGLVD-------SLASLPrmiITPLLDIRMLLIVPLLAYSGLQQAFVWAE 270
Cdd:cd17408 225 ESALMGAAFLSMLLVLLLCGAAYR-----PTEEIDlrsigwgNIFQLP---FKHLRDYRLRLLIPFFIYSGFEVLFACTG 296
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 271 FTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAgrftsgLSSITFIVSGGAVAQASVFLWLLLG---YRQTSGVLGTAYP 347
Cdd:cd17408 297 FALSYGVCSLGLERLAYLLMAYGLSASLCSLLA------LSLLRLPRPVPLVAGAFLHLTLLITlffWAPTPRLTSQMPL 370
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 348 LIMAAIL-GIGDGILNTQISALLALLF--KHDTEGAFAQLKVWQSAAIAIVFFLSPyISLQAMLIVMLVMVCVSLFSFLF 424
Cdd:cd17408 371 LYVVAALwGLGSALNKTGLSTLLGILYedKERQDFIFTIYHWWQALAIFIVYLWSN-LPMKAKLGILLATLVIALLSYLW 449

                ....*
gi 30680880 425 LALKV 429
Cdd:cd17408 450 MERKL 454
MFS_unc93-like cd06178
Uncharacterized Unc-93-like proteins of the Major Facilitator Superfamily of transporters; ...
67-256 2.74e-09

Uncharacterized Unc-93-like proteins of the Major Facilitator Superfamily of transporters; This subfamily consists of uncharacterized proteins, mainly from fungi and plants, with similarity to Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The unc93-like subfamily belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340867  Cd Length: 415  Bit Score: 58.85  E-value: 2.74e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  67 LYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANL-----KPSWFTMVpASLYLGFAASIIWVGQGTYLTSIARS 141
Cdd:cd06178  41 LYATFAVFGFFGGGIFNLLGPRLTLAFGGTGYPLYAGSLLsynhvQNQGFVIF-AGAILGIGAGLLWTAQGAIMLSYPTE 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 142 HATdhglhegsviGVFNGEFWAMFACHQLFGNLITLALLKDGKEGSTSGTTLLMlvFLFSMTLGTILMFFI----RKIDG 217
Cdd:cd06178 120 NQK----------GRFIAIFWVIFNLGGVIGSLIPFGLNYHSTSATVNDATYIA--FIVLMAVGAVLALLLldppKVVRK 187
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 30680880 218 EDGKGPVGSPVGLVDSLASLprmIITPLLDIRMLLIVPL 256
Cdd:cd06178 188 DGGRVAAIKSATWVSEELKL---LLKLFKDPKMLLLFPA 223
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
64-425 1.55e-03

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 40.61  E-value: 1.55e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880  64 LGILYVSFMFCSMVASLVVRLMGSKNALVLG----TTGYWLFVAAnlkPSWFTMVPASLYLGFAASIIWVGQGTYLTSIA 139
Cdd:COG0738  49 LFAFFLGYLLASLPAGRLIDRFGYKRGLLLGlllmALGLLLFALA---PSYPLLLLALFLLGLGLGLLDVAANPYVAALG 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 140 RSHATdhglhegSVIGVFNgefwAMFACHQLFGNLITLALLKDGKEGSTSGTTLLMLVFLFSMTLGTILMFFIRKIDGED 219
Cdd:COG0738 126 PETAA-------SRLNLLH----AFFSLGALLGPLLGGLLILLGLSLSWHLPYLILAVLLLLLALLFLRSKLPEIEEEEE 194
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 220 GKGPVGSPVGlvdSLASLPRMIitplldirmLLIVPLLAYSGLQQAF-VWaeftkeIVTPAIGVSGVGGAMAVYGALDAV 298
Cdd:COG0738 195 EAAGSAASLK---SLLKNPRLL---------LGGLAIFLYVGAEGAIgDW------LPLYLKDVLGLSEATAALGLSLFW 256
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30680880 299 CSMTAGRFTSG-----LSSITFIVSGGAVAQASVFLWLLLGYRQTSgvlgtaypLIMAAILGIGDGILNTQISALLALLF 373
Cdd:COG0738 257 GGMTIGRFLGGfllkrFGPVRLLRLSALLAAVGLLLALLAPGPWLA--------LIGLALVGLGLSLMFPTIFSLALDGL 328
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 30680880 374 KHDTEGAFAQLKVWQSAAIAIVF----FLSPYISLQAMLIVMLVMVCVSLFSFLFL 425
Cdd:COG0738 329 GKRTAAAVSAVLIMGIVGGAIGPpligFLADAFGLRAAFLVPLVCYLLILLLALAL 384
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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