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Conserved domains on  [gi|30679001|ref|NP_849284|]
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dihydroorotate dehydrogenase [Arabidopsis thaliana]

Protein Classification

DUF952 domain-containing protein( domain architecture ID 10532885)

DUF952 domain-containing protein similar to Arabidopsis thaliana dihydroorotate dehydrogenase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF952 pfam06108
Protein of unknown function (DUF952); This family consists of several hypothetical bacterial ...
 12-102 1.75e-27

Protein of unknown function (DUF952); This family consists of several hypothetical bacterial and plant proteins of unknown function.


:

Pssm-ID: 428774  Cd Length: 84  Bit Score: 96.49  E-value: 1.75e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30679001    12 TEQEWEEFKKNGSSYGAEIDKSTCYYHLSKLDQVQLTLKNFFVDVKEyLYLLQVDPKKLGDGLIYEAVDEVNSFPHFYGp 91
Cdd:pfam06108   1 PAAEWEAAQAAGVYRGASLDDADGFIHLSTAEQVPGTANRFFAGQED-LVLLVIDPAKLGAPLRWEPSRGGELFPHLYG- 78

                          90
                  ....*....|.
gi 30679001    92 dktfvPLPLDS 102
Cdd:pfam06108  79 -----PLPLDA 84
 
Name Accession Description Interval E-value
DUF952 pfam06108
Protein of unknown function (DUF952); This family consists of several hypothetical bacterial ...
 12-102 1.75e-27

Protein of unknown function (DUF952); This family consists of several hypothetical bacterial and plant proteins of unknown function.


Pssm-ID: 428774  Cd Length: 84  Bit Score: 96.49  E-value: 1.75e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30679001    12 TEQEWEEFKKNGSSYGAEIDKSTCYYHLSKLDQVQLTLKNFFVDVKEyLYLLQVDPKKLGDGLIYEAVDEVNSFPHFYGp 91
Cdd:pfam06108   1 PAAEWEAAQAAGVYRGASLDDADGFIHLSTAEQVPGTANRFFAGQED-LVLLVIDPAKLGAPLRWEPSRGGELFPHLYG- 78

                          90
                  ....*....|.
gi 30679001    92 dktfvPLPLDS 102
Cdd:pfam06108  79 -----PLPLDA 84
COG3502 COG3502
Uncharacterized conserved protein, DUF952 family [Function unknown];
6-106 1.60e-21

Uncharacterized conserved protein, DUF952 family [Function unknown];


Pssm-ID: 442725  Cd Length: 113  Bit Score: 82.19  E-value: 1.60e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30679001   6 FIYRISTEQEWEEFKKNGSSYGAEIDKSTcYYHLSKLDQVQLTLKNFFVDVKEyLYLLQVDPKKLGDGLIYEAVDEVNSF 85
Cdd:COG3502   3 MIYHIAPAAEWEAAEAAGEYRGASLDADG-FIHFSTAEQVAETANKHFAGQED-LVLLAIDPDALGAALRWEPSRGGALF 80

                        90       100
                ....*....|....*....|.
gi 30679001  86 PHFYGpdktfvPLPLDSVVKA 106
Cdd:COG3502  81 PHLYG------PLPLDAVVWV 95
 
Name Accession Description Interval E-value
DUF952 pfam06108
Protein of unknown function (DUF952); This family consists of several hypothetical bacterial ...
 12-102 1.75e-27

Protein of unknown function (DUF952); This family consists of several hypothetical bacterial and plant proteins of unknown function.


Pssm-ID: 428774  Cd Length: 84  Bit Score: 96.49  E-value: 1.75e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30679001    12 TEQEWEEFKKNGSSYGAEIDKSTCYYHLSKLDQVQLTLKNFFVDVKEyLYLLQVDPKKLGDGLIYEAVDEVNSFPHFYGp 91
Cdd:pfam06108   1 PAAEWEAAQAAGVYRGASLDDADGFIHLSTAEQVPGTANRFFAGQED-LVLLVIDPAKLGAPLRWEPSRGGELFPHLYG- 78

                          90
                  ....*....|.
gi 30679001    92 dktfvPLPLDS 102
Cdd:pfam06108  79 -----PLPLDA 84
COG3502 COG3502
Uncharacterized conserved protein, DUF952 family [Function unknown];
6-106 1.60e-21

Uncharacterized conserved protein, DUF952 family [Function unknown];


Pssm-ID: 442725  Cd Length: 113  Bit Score: 82.19  E-value: 1.60e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30679001   6 FIYRISTEQEWEEFKKNGSSYGAEIDKSTcYYHLSKLDQVQLTLKNFFVDVKEyLYLLQVDPKKLGDGLIYEAVDEVNSF 85
Cdd:COG3502   3 MIYHIAPAAEWEAAEAAGEYRGASLDADG-FIHFSTAEQVAETANKHFAGQED-LVLLAIDPDALGAALRWEPSRGGALF 80

                        90       100
                ....*....|....*....|.
gi 30679001  86 PHFYGpdktfvPLPLDSVVKA 106
Cdd:COG3502  81 PHLYG------PLPLDAVVWV 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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