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Conserved domains on  [gi|28570190|ref|NP_788269|]
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sodium-dependent glucose transporter 1 [Rattus norvegicus]

Protein Classification

sodium-dependent glucose transporter 1( domain architecture ID 13024592)

sodium-dependent glucose transporter 1 (NaGLT1) may function as a sodium-dependent glucose transporter, which is a potential channel for urea in the inner medulla of kidney

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_NaGLT1_MFSD4B cd17454
Sodium-dependent glucose transporter 1, also called Major facilitator superfamily ...
45-452 0e+00

Sodium-dependent glucose transporter 1, also called Major facilitator superfamily domain-containing protein 4B; Sodium-dependent glucose transporter 1 (NaGLT1) is also called major facilitator superfamily domain-containing protein 4B (MFSD4B). NaGLT1 is a primary fructose transporter in rat renal brush-border membranes. It also facilitates sodium-independent urea uptake in assays performed on Xenopus oocytes. NaGLT1/MFSD4B belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 341012  Cd Length: 369  Bit Score: 571.31  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  45 VLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTP 124
Cdd:cd17454   1 ALCASFLGLGMSIAVLGPTFQDLATNVNKNISNISYIFVGRSLGYLGGSVLGGILFDCMNHHLLLGFSMLITAAGLFAIP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 125 FCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAWgttasaqnhtepqldr 204
Cdd:cd17454  81 WCKKALLLTALMSLIGVSMGVLDTGGNVLILNTWGDQAGPHMQALHFSFALGAFVAPILAKLAF---------------- 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 205 salnrsfeaasdsvlavpddmnlLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCLLFLFFF 284
Cdd:cd17454 145 -----------------------LWAYIVIGTYVLLVSLFFFILYSKSSSNREKSKASAQKTRFAKYHNALIILLFLFFF 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 285 FYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVLFDKSP 364
Cdd:cd17454 202 FYVGAEVTYGSYIFTYAKTYVHMEESEAAGLNSLFWGTFAACRGLAIFFAACLYPGTMILLSLIGSTVSSLFLVLFSKNP 281
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 365 LCLWIASSVYGASMAATFPSGISWIEQYTTLTGKSAAFILVGAALGLMATPALSGILQGHYPDLPVILYMCLGSAVLTTV 444
Cdd:cd17454 282 ISLWVGTAVYGASMATTFPSGISWIEQYTTITGKSAALFVVGAALGEMVIPAVVGYLQGHVPDYPVLMYTALGTSTMTAI 361

                ....*...
gi 28570190 445 LFPVMYKV 452
Cdd:cd17454 362 LFPVMYKL 369
 
Name Accession Description Interval E-value
MFS_NaGLT1_MFSD4B cd17454
Sodium-dependent glucose transporter 1, also called Major facilitator superfamily ...
45-452 0e+00

Sodium-dependent glucose transporter 1, also called Major facilitator superfamily domain-containing protein 4B; Sodium-dependent glucose transporter 1 (NaGLT1) is also called major facilitator superfamily domain-containing protein 4B (MFSD4B). NaGLT1 is a primary fructose transporter in rat renal brush-border membranes. It also facilitates sodium-independent urea uptake in assays performed on Xenopus oocytes. NaGLT1/MFSD4B belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341012  Cd Length: 369  Bit Score: 571.31  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  45 VLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTP 124
Cdd:cd17454   1 ALCASFLGLGMSIAVLGPTFQDLATNVNKNISNISYIFVGRSLGYLGGSVLGGILFDCMNHHLLLGFSMLITAAGLFAIP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 125 FCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAWgttasaqnhtepqldr 204
Cdd:cd17454  81 WCKKALLLTALMSLIGVSMGVLDTGGNVLILNTWGDQAGPHMQALHFSFALGAFVAPILAKLAF---------------- 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 205 salnrsfeaasdsvlavpddmnlLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCLLFLFFF 284
Cdd:cd17454 145 -----------------------LWAYIVIGTYVLLVSLFFFILYSKSSSNREKSKASAQKTRFAKYHNALIILLFLFFF 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 285 FYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVLFDKSP 364
Cdd:cd17454 202 FYVGAEVTYGSYIFTYAKTYVHMEESEAAGLNSLFWGTFAACRGLAIFFAACLYPGTMILLSLIGSTVSSLFLVLFSKNP 281
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 365 LCLWIASSVYGASMAATFPSGISWIEQYTTLTGKSAAFILVGAALGLMATPALSGILQGHYPDLPVILYMCLGSAVLTTV 444
Cdd:cd17454 282 ISLWVGTAVYGASMATTFPSGISWIEQYTTITGKSAALFVVGAALGEMVIPAVVGYLQGHVPDYPVLMYTALGTSTMTAI 361

                ....*...
gi 28570190 445 LFPVMYKV 452
Cdd:cd17454 362 LFPVMYKL 369
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
39-452 4.47e-28

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 115.34  E-value: 4.47e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  39 RWFTTVVLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAA 118
Cdd:COG0738   6 YRRALIAIYLLFFLWGFATALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMAL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 119 GLYLTPFCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAwgttasaqnht 198
Cdd:COG0738  86 GLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRLNLLHAFFSLGALLGPLLGGLL----------- 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 199 epqldrsalnrsfeaasdsvLAVPDDMNLLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCL 278
Cdd:COG0738 155 --------------------ILLGLSLSWHLPYLILAVLLLLLALLFLRSKLPEIEEEEEEAAGSAASLKSLLKNPRLLL 214
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 279 LFLFFFFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLV 358
Cdd:COG0738 215 GGLAIFLYVGAEGAIGDWLPLYLKDVLGLSEATAALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRLSALLAAVGLLLAL 294
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 359 LFDKSPLCLWIASSVyGASMAATFPSGISW-IEQYTTLTGKSAAFILVGAALGLMATPALSGILQGHYpDLPVILYMCLG 437
Cdd:COG0738 295 LAPGPWLALIGLALV-GLGLSLMFPTIFSLaLDGLGKRTAAAVSAVLIMGIVGGAIGPPLIGFLADAF-GLRAAFLVPLV 372
                       410
                ....*....|....*
gi 28570190 438 SAVLTTVLFPVMYKV 452
Cdd:COG0738 373 CYLLILLLALALKRK 387
PRK03699 PRK03699
putative transporter; Provisional
53-425 2.90e-04

putative transporter; Provisional


Pssm-ID: 235151 [Multi-domain]  Cd Length: 394  Bit Score: 42.99  E-value: 2.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   53 MGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLfdcMNHF------LLLGLSHLLTAAGLYLTPfc 126
Cdd:PRK03699  19 TGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWL---MEIIplkrqlIFGFALMILAVAGLMFSH-- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  127 kTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKgaphIQALH-----FSFALGAFLAPLLAklAWgttasaqnhtepq 201
Cdd:PRK03699  94 -SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK----QRGSRllftdSFFSMAGMIFPIIA--AY------------- 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  202 ldrsALNRSFEaasdsvlavpddmnLLWAYASIG-TYVLVLSVFLFAPFfkkrSKQKKSAASAQGARRAKYHRALLCLLF 280
Cdd:PRK03699 154 ----LLARSIE--------------WYWVYACIGlVYVAIFILTLFSEF----PALGKHAPKADKPVAKEKWGIGVLFLA 211
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  281 LFFFFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGtfAACRGLAIFFATL----LQpgTMMVLCNIGSLASSFF 356
Cdd:PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWM--AYMVGMWIFSFIVrffdLQ--RILTVLAGLALVLMYL 287
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  357 LVLFDKSPLCLWIASSvYGASMAATFPSGISWIEQYTTLTG-KSAAFILVGAALGLMATPALSGILQGHY 425
Cdd:PRK03699 288 FVNTDDPSHLLYAILG-LGFFSSAIYTTIITLGSQQTKVASpKLVNFILTCGTIGTMLTFVVTSPIVAHF 356
MFS_1 pfam07690
Major Facilitator Superfamily;
49-415 6.53e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 42.02  E-value: 6.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190    49 AFLGMGVSAAVLGPTFP-DLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTPFCK 127
Cdd:pfam07690   4 AAFLAALGRSLLGPALPlLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFAS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   128 TAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQAL-HFSFALGAFLAPLLAklawgttasaqnhtepqldrsa 206
Cdd:pfam07690  84 SLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLvSAGFGLGAALGPLLG---------------------- 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   207 lnrsfeaasdSVLAVPDDMNLLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCLLFLFFFFY 286
Cdd:pfam07690 142 ----------GLLASLFGWRAAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLL 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   287 VGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVL--FDKSP 364
Cdd:pfam07690 212 FGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLlsLTLSS 291
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 28570190   365 LCLWIASSVYGASMAATFPSGISWIEQY--TTLTGKSAAFILVGAALGLMATP 415
Cdd:pfam07690 292 LWLLLALLLLGFGFGLVFPALNALVSDLapKEERGTASGLYNTAGSLGGALGP 344
 
Name Accession Description Interval E-value
MFS_NaGLT1_MFSD4B cd17454
Sodium-dependent glucose transporter 1, also called Major facilitator superfamily ...
45-452 0e+00

Sodium-dependent glucose transporter 1, also called Major facilitator superfamily domain-containing protein 4B; Sodium-dependent glucose transporter 1 (NaGLT1) is also called major facilitator superfamily domain-containing protein 4B (MFSD4B). NaGLT1 is a primary fructose transporter in rat renal brush-border membranes. It also facilitates sodium-independent urea uptake in assays performed on Xenopus oocytes. NaGLT1/MFSD4B belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341012  Cd Length: 369  Bit Score: 571.31  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  45 VLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTP 124
Cdd:cd17454   1 ALCASFLGLGMSIAVLGPTFQDLATNVNKNISNISYIFVGRSLGYLGGSVLGGILFDCMNHHLLLGFSMLITAAGLFAIP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 125 FCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAWgttasaqnhtepqldr 204
Cdd:cd17454  81 WCKKALLLTALMSLIGVSMGVLDTGGNVLILNTWGDQAGPHMQALHFSFALGAFVAPILAKLAF---------------- 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 205 salnrsfeaasdsvlavpddmnlLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCLLFLFFF 284
Cdd:cd17454 145 -----------------------LWAYIVIGTYVLLVSLFFFILYSKSSSNREKSKASAQKTRFAKYHNALIILLFLFFF 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 285 FYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVLFDKSP 364
Cdd:cd17454 202 FYVGAEVTYGSYIFTYAKTYVHMEESEAAGLNSLFWGTFAACRGLAIFFAACLYPGTMILLSLIGSTVSSLFLVLFSKNP 281
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 365 LCLWIASSVYGASMAATFPSGISWIEQYTTLTGKSAAFILVGAALGLMATPALSGILQGHYPDLPVILYMCLGSAVLTTV 444
Cdd:cd17454 282 ISLWVGTAVYGASMATTFPSGISWIEQYTTITGKSAALFVVGAALGEMVIPAVVGYLQGHVPDYPVLMYTALGTSTMTAI 361

                ....*...
gi 28570190 445 LFPVMYKV 452
Cdd:cd17454 362 LFPVMYKL 369
MFS_MFSD4 cd17395
Major facilitator superfamily domain-containing protein 4; The Major facilitator superfamily ...
45-452 1.67e-157

Major facilitator superfamily domain-containing protein 4; The Major facilitator superfamily domain-containing protein 4 (MFSD4) subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The MFSD4 subfamily belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340953 [Multi-domain]  Cd Length: 367  Bit Score: 451.59  E-value: 1.67e-157
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  45 VLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTP 124
Cdd:cd17395   1 TYWSVFFSFGLSIAFLGPTLLDLACNTNSSLPQISWVFFSRQLGYLLGSALGGVFKRTLNSLWALFTSSLLIALVLAVIP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 125 FCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAwgttasaqnhtepqldr 204
Cdd:cd17395  81 FCKDVKVLASVMAIAGLAMGCLDTGANMQIVRMWQKDSAPFLQVLHFSFGFGAFLAPLIADPF----------------- 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 205 salnrsfeaasdsvlavpddmnLLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAA-SAQGARRAKYHRALLCLLFLFF 283
Cdd:cd17395 144 ----------------------LSYAYWIMALINLPVPMAVLMLLSKERLLTCCSQRrRKNLRRAPYSFFAIHITGALFL 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 284 FFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVLFDKS 363
Cdd:cd17395 202 FMYVGLEGAYGAFVYSYAVEKPGVGHKVAAYLPSLFWGTFTLGRLLSIPISSRMKPATMVVLNVVGVVVTSLVLLLFSKS 281
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 364 PLCLWIASSVYGASMAATFPSGISWIEQYTTLTGKSAAFILVGAALGLMATPALSGILQghyPDLPVILYMCLGSAVLTT 443
Cdd:cd17395 282 VVFLWIGTASLGLFLASTFPSMLSYTEDSLQYTGCSTTVLVTGAGLGEMVLPMLVGSIQ---PFQAQGSYSFLVCGVLFG 358

                ....*....
gi 28570190 444 VLFPVMYKV 452
Cdd:cd17395 359 CLAFTFYIL 367
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
49-445 3.02e-29

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 118.19  E-value: 3.02e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  49 AFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTPFCKT 128
Cdd:cd17333   4 SFFSNGLTDALLGILGPSLEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 129 AALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAWGTTASAQnhtepqldrsaln 208
Cdd:cd17333  84 IYLFVVLMFLAGLGAGILDTGANTFVGALFEESSATRLNVLHGFFGLGALIGPLIATSLLTSELSWS------------- 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 209 rsfeaasdsvlavpddmnllWAYASIGTYVLVLSVFLFAPFFKKR--SKQKKSAASAQGARRAKYHR-ALLCLLFLFFFF 285
Cdd:cd17333 151 --------------------WAYLIIGLIYLLLAILILLTLFPELpsARNPQQSVGAFSASASRLLRnPSIILGALALFL 210
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 286 YVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLAsSFFLVLFDKSPL 365
Cdd:cd17333 211 YVGAETAFSSWVPSYLVEKKHVSDGLAGYLLSGFWVGITIGRLLGGPISRRIKPHTLLVLSGSGALL-GLLILLLAPTLV 289
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 366 CLWIASSVYGASMAATFPSGISW-IEQYTTLTGKSAAFILVGAALGLMATPALSGILqGHYPDLPVILYMCLGSAVLTTV 444
Cdd:cd17333 290 VGLVATALLGLFMAALFPTILSLgISNLPYAKGKGTSVLLAAGSIGGAIIPFIMGFI-AEAVGIQTAMLLITILYAIIFV 368

                .
gi 28570190 445 L 445
Cdd:cd17333 369 L 369
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
39-452 4.47e-28

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 115.34  E-value: 4.47e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  39 RWFTTVVLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAA 118
Cdd:COG0738   6 YRRALIAIYLLFFLWGFATALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMAL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 119 GLYLTPFCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAwgttasaqnht 198
Cdd:COG0738  86 GLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRLNLLHAFFSLGALLGPLLGGLL----------- 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 199 epqldrsalnrsfeaasdsvLAVPDDMNLLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCL 278
Cdd:COG0738 155 --------------------ILLGLSLSWHLPYLILAVLLLLLALLFLRSKLPEIEEEEEEAAGSAASLKSLLKNPRLLL 214
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 279 LFLFFFFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLV 358
Cdd:COG0738 215 GGLAIFLYVGAEGAIGDWLPLYLKDVLGLSEATAALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRLSALLAAVGLLLAL 294
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 359 LFDKSPLCLWIASSVyGASMAATFPSGISW-IEQYTTLTGKSAAFILVGAALGLMATPALSGILQGHYpDLPVILYMCLG 437
Cdd:COG0738 295 LAPGPWLALIGLALV-GLGLSLMFPTIFSLaLDGLGKRTAAAVSAVLIMGIVGGAIGPPLIGFLADAF-GLRAAFLVPLV 372
                       410
                ....*....|....*
gi 28570190 438 SAVLTTVLFPVMYKV 452
Cdd:COG0738 373 CYLLILLLALALKRK 387
MFS_MFSD4A cd17453
Major facilitator superfamily domain-containing protein 4A; Major facilitator superfamily ...
50-446 1.08e-16

Major facilitator superfamily domain-containing protein 4A; Major facilitator superfamily domain-containing protein 4A (MFSD4A) belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341011  Cd Length: 415  Bit Score: 81.77  E-value: 1.08e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  50 FLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLY-LTPFCKT 128
Cdd:cd17453   8 FFSFGLCIAFLGPTLLDLRCQTQSSLQQITWVFFSQQFCLLLGSTLGGVFKRTLAQSLFALFVSSLAISVVFaIIPFCRN 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 129 AALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAklawgttasaqnhtEPQL-DRSAL 207
Cdd:cd17453  88 VGVLAFVMAVAGLAMGCIDTISNMQLVKIYQKDSAVFLQALHFFVGFGALLSPLIA--------------DPFLsDTNCV 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 208 NRSFEAASDSVLAVPddmnllwayasIGTYVLVLSVFLFAPFFKKR-------------SKQKKSAASAQGARRAKYHR- 273
Cdd:cd17453 154 SYAFWIMAIINLPVP-----------IAVFVLLYKERMVPCCSDPSrpllsadelameaRPEEKLDESTGKAHTSNGHAd 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 274 ----ALLCLLFLFFFFYVGAEVT--------------YGSYVFSFATTH-VGMEESEAAGLNSIFWGTFAACRGLAIFFA 334
Cdd:cd17453 223 lfscCQSKNFRGAPFSFFAIHVTgalvlfmtdgivgeYSGFVYSYAVEPpLNLPHKVAGYLPSLFWGFITLGRLISIPIS 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 335 TLLQPGTMMVLCNIGSLASSFFLVLFDKSPLCLWIASSVYGASMAATFPSGISWIEQYTTLTGKSAAFILVGAALGLMAT 414
Cdd:cd17453 303 YRMKPATMVFINLVGVIVTFLLLLIFSNSTVFLFVGTASLGLFLSSTFPSMLAYTEDILQYKGCATTVLVTGAGMGEMVL 382
                       410       420       430
                ....*....|....*....|....*....|....*
gi 28570190 415 PALSGIL---QGHYPDLpvILYMCLGSAVLTTVLF 446
Cdd:cd17453 383 QMLVGSImhsQGSYSFL--VCGMIFGCLAFTFYTF 415
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
49-446 7.03e-09

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 57.44  E-value: 7.03e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  49 AFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTPFCKT 128
Cdd:cd06174   4 GFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 129 AALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSF-ALGAFLAPLLAklawgttasaqnhtepqldrsal 207
Cdd:cd06174  84 FWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFgSVGGILGPLLG----------------------- 140
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 208 nrsfeaasdSVLAVPDDMNLLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAK-----YHRALLCLLFLF 282
Cdd:cd06174 141 ---------GILASSLGFGWRAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLKllkrvLKNPGLWLLLLA 211
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 283 FFFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVLFDK 362
Cdd:cd06174 212 IFLVNLAYYSFSTLLPLFLLDLGGLSVAVAGLLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAP 291
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 363 SPLCLWIASSVYGASMAATFPSGISWIEQYTTLTGKSAA--FILVGAALGLMATPALSGILQGHYPDLPVILYMCLGSAV 440
Cdd:cd06174 292 SLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAfgLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLL 371

                ....*.
gi 28570190 441 LTTVLF 446
Cdd:cd06174 372 LAAILL 377
MFS_FucP_like cd17394
Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters; ...
129-421 7.91e-09

Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of L-fucose permease (also called L-fucose-proton symporter) and similar proteins such as glucose/galactose transporter and N-acetyl glucosamine transporter NagP. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. Glucose/galactose transporter functions in the uptake of of glucose and galactose. The FucP-like subfamily belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340952 [Multi-domain]  Cd Length: 401  Bit Score: 57.62  E-value: 7.91e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 129 AALLTAMMSI-TGVSFgvLDTGGNVLILDLWGDKGAPHIQALHFSF-ALGAFLAPLLAKLAWGTTASAQNHTEPQLDRSA 206
Cdd:cd17394  91 GLFLIALFVLaSGLAL--LQTAANPYVTVLGPEETAARRLNLAQAFnSLGSTIAPLFGSYLILSGIPSTATALAAMSAAE 168
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 207 LNRSFEAASDSVLAVpddmnllwaYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCLLFLFFFFY 286
Cdd:cd17394 169 LQAYKTAELASVQLP---------YLGIALVLLLLAVLILLSKLPEIEAAEAEALGSKGTLLRLLKNPHLRLGVLAIFFY 239
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 287 VGAEVTYGSYVFSFATTHV-GMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVLFDK-SP 364
Cdd:cd17394 240 VGAEVAIWSFLINYLMEYIaGLTETSAATFVSYYWGGFMVGRFLGTALLKKISPKKLLAVFALLGLLLLLGAIFTGGmVA 319
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 28570190 365 LCLWIASSVYGASMAAT-FPSGISWIEQYTtltgKSAAFILVGAALGLMATPALSGIL 421
Cdd:cd17394 320 LYALVLVGFFNSIMFPTiFSLALKGLGKHT----KTGSGLLVMAIVGGAVVPLIQGAV 373
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
39-416 9.86e-07

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 50.74  E-value: 9.86e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  39 RWFTTVVLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAA 118
Cdd:COG2814   8 RWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFAL 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 119 GLYLTPFCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFS-FALGAFLAPLLAklawgttasaqnh 197
Cdd:COG2814  88 GSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAgLGLGPALGPLLG------------- 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 198 tepqldrsalnrsfeaasdSVLAVpddmNLLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLC 277
Cdd:COG2814 155 -------------------GLLAD----LFGWRWVFLVNAVLALLALLLLLRLLPESRPAARARLRGSLRELLRRPRLLL 211
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 278 LLFLFFFFYVGAeVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCnIGSLASSFFL 357
Cdd:COG2814 212 LLLLAFLLGFGF-FALFTYLPLYLQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIG-LLLLALGLLL 289
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 28570190 358 VLFDKSPLCLWIASSVYGASMAATFPSGISWIEQYTTLTGKSAAFILVGAALGLMATPA 416
Cdd:COG2814 290 LALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGGPLA 348
PRK03699 PRK03699
putative transporter; Provisional
53-425 2.90e-04

putative transporter; Provisional


Pssm-ID: 235151 [Multi-domain]  Cd Length: 394  Bit Score: 42.99  E-value: 2.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   53 MGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLfdcMNHF------LLLGLSHLLTAAGLYLTPfc 126
Cdd:PRK03699  19 TGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWL---MEIIplkrqlIFGFALMILAVAGLMFSH-- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  127 kTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKgaphIQALH-----FSFALGAFLAPLLAklAWgttasaqnhtepq 201
Cdd:PRK03699  94 -SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK----QRGSRllftdSFFSMAGMIFPIIA--AY------------- 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  202 ldrsALNRSFEaasdsvlavpddmnLLWAYASIG-TYVLVLSVFLFAPFfkkrSKQKKSAASAQGARRAKYHRALLCLLF 280
Cdd:PRK03699 154 ----LLARSIE--------------WYWVYACIGlVYVAIFILTLFSEF----PALGKHAPKADKPVAKEKWGIGVLFLA 211
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  281 LFFFFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGtfAACRGLAIFFATL----LQpgTMMVLCNIGSLASSFF 356
Cdd:PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWM--AYMVGMWIFSFIVrffdLQ--RILTVLAGLALVLMYL 287
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  357 LVLFDKSPLCLWIASSvYGASMAATFPSGISWIEQYTTLTG-KSAAFILVGAALGLMATPALSGILQGHY 425
Cdd:PRK03699 288 FVNTDDPSHLLYAILG-LGFFSSAIYTTIITLGSQQTKVASpKLVNFILTCGTIGTMLTFVVTSPIVAHF 356
MFS_1 pfam07690
Major Facilitator Superfamily;
49-415 6.53e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 42.02  E-value: 6.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190    49 AFLGMGVSAAVLGPTFP-DLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTPFCK 127
Cdd:pfam07690   4 AAFLAALGRSLLGPALPlLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFAS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   128 TAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQAL-HFSFALGAFLAPLLAklawgttasaqnhtepqldrsa 206
Cdd:pfam07690  84 SLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLvSAGFGLGAALGPLLG---------------------- 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   207 lnrsfeaasdSVLAVPDDMNLLWAYASIGTYVLVLSVFLFAPFFKKRSKQKKSAASAQGARRAKYHRALLCLLFLFFFFY 286
Cdd:pfam07690 142 ----------GLLASLFGWRAAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLL 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190   287 VGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVL--FDKSP 364
Cdd:pfam07690 212 FGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLlsLTLSS 291
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 28570190   365 LCLWIASSVYGASMAATFPSGISWIEQY--TTLTGKSAAFILVGAALGLMATP 415
Cdd:pfam07690 292 LWLLLALLLLGFGFGLVFPALNALVSDLapKEERGTASGLYNTAGSLGGALGP 344
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
284-451 6.86e-04

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 41.79  E-value: 6.86e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 284 FFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPGTMMVLCNIGSLASSFFLVLFDKS 363
Cdd:COG2223 215 FGTFGSFIGFSSWLPPYLVDQFGLSAATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALMALGLLLLALALGS 294
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 364 PLCLWIASSVYGASMAATFPSGISWIEQY--TTLTGKSAAFILVGAALGLMATPALSGILQGHYPDLPVILYMCLGSAVL 441
Cdd:COG2223 295 LWLFLVLFLLLGLALGGGNGAVFALVPDIfpTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATGSYTAAFLVFAVLALV 374
                       170
                ....*....|
gi 28570190 442 TTVLFPVMYK 451
Cdd:COG2223 375 ALVLTLLLYR 384
MFS_MosC_like cd17393
Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of ...
48-197 1.76e-03

Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters; The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340951 [Multi-domain]  Cd Length: 373  Bit Score: 40.70  E-value: 1.76e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  48 AAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGLSHLLTAAGLYLTPFCK 127
Cdd:cd17393   6 AFFFINGILMASWATRIPAIKDRLGLSDAALGLLLLALGVGALVAMPLAGRLVARFGSRRVTRLGALLLLLALLLLGLAP 85
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 128 TAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFALGAFLAPLLAKLAWGTTASAQNH 197
Cdd:cd17393  86 SVPALALALFLFGAANGALDVAMNAQGVAVERAYGRPIMSSLHAMWSLGGLAGALLGAAAIGAGVSPGVH 155
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
32-451 9.18e-03

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 38.31  E-value: 9.18e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190  32 DQVGRTLRWFTTVVLNAAFLGMGVSAAVLGPTFPDLARNVNRNISSLSEIFVGRALGYLGGSVVGGVLFDCMNHFLLLGL 111
Cdd:COG2271   1 ARAPSRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 112 SHLLTAAGLYLTPFCKTAALLTAMMSITGVSFGVLDTGGNVLILDLWGDKGAPHIQALHFSFA-LGAFLAPLLaklawgt 190
Cdd:COG2271  81 GLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGpLGGALAPPL------- 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 191 tasaqnhtepqldrsalnrsfeaasdsVLAVPDDMNLLWAYASIGTYVLVLSVFLFAPFFkkrskqkksaasaqgarrak 270
Cdd:COG2271 154 ---------------------------LGWLLAAFGWRAAFLILGLPGLLLALLRFWLLA-------------------- 186
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 271 yhrallcllfLFFFFYVGAEVTYGSYVFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATLLQPG--TMMVLCNI 348
Cdd:COG2271 187 ----------LAYFLVYFALYGFLTWLPTYLVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLL 256
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28570190 349 GSLASSFFLVLFDkSPLCLWIASSVYGASMAATFPSGISWIEQY--TTLTGKSAAFILVGAALGLMATPALSGILQGHYp 426
Cdd:COG2271 257 LAALALLLLALLP-SPALAIALLFLAGFGLGGAFGLLWALAAELfpKKARGTASGLVNTFGFLGGALGPLLVGYLLDAT- 334
                       410       420
                ....*....|....*....|....*
gi 28570190 427 DLPVILYMCLGSAVLTTVLFPVMYK 451
Cdd:COG2271 335 GYQAAFLLLAALALLAALLALLLLR 359
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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