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Conserved domains on  [gi|453232370|ref|NP_741517|]
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Ubiquitin carboxyl-terminal hydrolase 36 [Caenorhabditis elegans]

Protein Classification

ubiquitin carboxyl-terminal hydrolase( domain architecture ID 10115580)

ubiquitin carboxyl-terminal hydrolase is a C19 family peptidase that catalyzes the thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the-terminal Gly of ubiquitin, a 76-residue protein attached to proteins as an intracellular targeting signal

CATH:  2.20.210.10
EC:  3.4.19.12
Gene Ontology:  GO:0004843|GO:0016579
SCOP:  4003158

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidase_C19 cd02257
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
163-378 5.89e-40

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


:

Pssm-ID: 239072 [Multi-domain]  Cd Length: 255  Bit Score: 142.62  E-value: 5.89e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 163 RQEDAHDALLAILGKLD----KISVQSNPRLKGRKVADDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMlrKDPSGKS 238
Cdd:cd02257   21 EQQDAHEFLLFLLDKLHeelkKSSKRTSDSSSLKSLIHDLFGGKLESTIVCLECGHESVSTEPELFLSLPL--PVKGLPQ 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 239 HSIKELMQALFTESKIFGYNCSKC--KKKSDAPVKPTLLRAPQILLMHISRFSFDGWG--KKISRPVTLNETLDVTSMAT 314
Cdd:cd02257   99 VSLEDCLEKFFKEEILEGDNCYKCekKKKQEATKRLKIKKLPPVLIIHLKRFSFNEDGtkEKLNTKVSFPLELDLSPYLS 178
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 453232370 315 AGA--------STVYKLCGAVIHGGTTLDYGHYWCVARSRKReEQFVTLNDSSVSQHTNPRDAL------QSYIVLYR 378
Cdd:cd02257  179 EGEkdsdsdngSYKYELVAVVVHSGTSADSGHYVAYVKDPSD-GKWYKFNDDKVTEVSEEEVLEfgslssSAYILFYE 255
 
Name Accession Description Interval E-value
Peptidase_C19 cd02257
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
163-378 5.89e-40

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239072 [Multi-domain]  Cd Length: 255  Bit Score: 142.62  E-value: 5.89e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 163 RQEDAHDALLAILGKLD----KISVQSNPRLKGRKVADDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMlrKDPSGKS 238
Cdd:cd02257   21 EQQDAHEFLLFLLDKLHeelkKSSKRTSDSSSLKSLIHDLFGGKLESTIVCLECGHESVSTEPELFLSLPL--PVKGLPQ 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 239 HSIKELMQALFTESKIFGYNCSKC--KKKSDAPVKPTLLRAPQILLMHISRFSFDGWG--KKISRPVTLNETLDVTSMAT 314
Cdd:cd02257   99 VSLEDCLEKFFKEEILEGDNCYKCekKKKQEATKRLKIKKLPPVLIIHLKRFSFNEDGtkEKLNTKVSFPLELDLSPYLS 178
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 453232370 315 AGA--------STVYKLCGAVIHGGTTLDYGHYWCVARSRKReEQFVTLNDSSVSQHTNPRDAL------QSYIVLYR 378
Cdd:cd02257  179 EGEkdsdsdngSYKYELVAVVVHSGTSADSGHYVAYVKDPSD-GKWYKFNDDKVTEVSEEEVLEfgslssSAYILFYE 255
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
90-377 3.39e-39

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 142.20  E-value: 3.39e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370   90 GIQNPSIYCYAISCVQLLSHVPAIVRILQ-------DHQCQDTACLCCNWKKNFLQSHGHAGTI----NWFREAFKKDRK 158
Cdd:pfam00443   2 GLVNLGNTCYMNSVLQSLFSIPPFRDYLLrisplseDSRYNKDINLLCALRDLFKALQKNSKSSsvspKMFKKSLGKLNP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  159 -FNQGRQEDAHDALLAILGKLDKISVQSNPRLKGRKVaDDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVrMLRKDPSGK 237
Cdd:pfam00443  82 dFSGYKQQDAQEFLLFLLDGLHEDLNGNHSTENESLI-TDLFRGQLKSRLKCLSCGEVSETFEPFSDLSL-PIPGDSAEL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  238 SHSIKELMQALFTESKIFG----YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFDGWG-KKISRPVTLNETLDVTSM 312
Cdd:pfam00443 160 KTASLQICFLQFSKLEELDdeekYYCDKCGCKQDAIKQLKISRLPPVLIIHLKRFSYNRSTwEKLNTEVEFPLELDLSRY 239
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 453232370  313 ATAGA------STVYKLCGAVIHGGtTLDYGHYWCVARSrKREEQFVTLNDSSVSQHTNPRDAL--QSYIVLY 377
Cdd:pfam00443 240 LAEELkpktnnLQDYRLVAVVVHSG-SLSSGHYIAYIKA-YENNRWYKFDDEKVTEVDEETAVLssSAYILFY 310
UBP12 COG5560
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
248-380 4.82e-04

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 42.18  E-value: 4.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 248 LFTESKIFG----YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFDgwgkkISRPVTLNETLD--VTSMATAGAsTVY 321
Cdd:COG5560  683 EFSKPEQLGlsdsWYCPGCKEFRQASKQMELWRLPMILIIHLKRFSSV-----RSFRDKIDDLVEypIDDLDLSGV-EYM 756
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 322 KLCGAVI---------HGGTTldYGHYWCVARsRKREEQFVTLNDSSVSQhTNPRDALQS--YIVLYRRR 380
Cdd:COG5560  757 VDDPRLIydlyavdnhYGGLS--GGHYTAYAR-NFANNGWYLFDDSRITE-VDPEDSVTSsaYVLFYRRK 822
 
Name Accession Description Interval E-value
Peptidase_C19 cd02257
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
163-378 5.89e-40

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239072 [Multi-domain]  Cd Length: 255  Bit Score: 142.62  E-value: 5.89e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 163 RQEDAHDALLAILGKLD----KISVQSNPRLKGRKVADDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMlrKDPSGKS 238
Cdd:cd02257   21 EQQDAHEFLLFLLDKLHeelkKSSKRTSDSSSLKSLIHDLFGGKLESTIVCLECGHESVSTEPELFLSLPL--PVKGLPQ 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 239 HSIKELMQALFTESKIFGYNCSKC--KKKSDAPVKPTLLRAPQILLMHISRFSFDGWG--KKISRPVTLNETLDVTSMAT 314
Cdd:cd02257   99 VSLEDCLEKFFKEEILEGDNCYKCekKKKQEATKRLKIKKLPPVLIIHLKRFSFNEDGtkEKLNTKVSFPLELDLSPYLS 178
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 453232370 315 AGA--------STVYKLCGAVIHGGTTLDYGHYWCVARSRKReEQFVTLNDSSVSQHTNPRDAL------QSYIVLYR 378
Cdd:cd02257  179 EGEkdsdsdngSYKYELVAVVVHSGTSADSGHYVAYVKDPSD-GKWYKFNDDKVTEVSEEEVLEfgslssSAYILFYE 255
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
90-377 3.39e-39

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 142.20  E-value: 3.39e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370   90 GIQNPSIYCYAISCVQLLSHVPAIVRILQ-------DHQCQDTACLCCNWKKNFLQSHGHAGTI----NWFREAFKKDRK 158
Cdd:pfam00443   2 GLVNLGNTCYMNSVLQSLFSIPPFRDYLLrisplseDSRYNKDINLLCALRDLFKALQKNSKSSsvspKMFKKSLGKLNP 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  159 -FNQGRQEDAHDALLAILGKLDKISVQSNPRLKGRKVaDDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVrMLRKDPSGK 237
Cdd:pfam00443  82 dFSGYKQQDAQEFLLFLLDGLHEDLNGNHSTENESLI-TDLFRGQLKSRLKCLSCGEVSETFEPFSDLSL-PIPGDSAEL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  238 SHSIKELMQALFTESKIFG----YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFDGWG-KKISRPVTLNETLDVTSM 312
Cdd:pfam00443 160 KTASLQICFLQFSKLEELDdeekYYCDKCGCKQDAIKQLKISRLPPVLIIHLKRFSYNRSTwEKLNTEVEFPLELDLSRY 239
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 453232370  313 ATAGA------STVYKLCGAVIHGGtTLDYGHYWCVARSrKREEQFVTLNDSSVSQHTNPRDAL--QSYIVLY 377
Cdd:pfam00443 240 LAEELkpktnnLQDYRLVAVVVHSG-SLSSGHYIAYIKA-YENNRWYKFDDEKVTEVDEETAVLssSAYILFY 310
Peptidase_C19E cd02661
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
90-377 3.88e-36

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239126 [Multi-domain]  Cd Length: 304  Bit Score: 133.94  E-value: 3.88e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  90 GIQNPSIYCYAISCVQLLSHVPAIVRILQDHQ-----CQDTACLCCNWK---KNFLQSHGHAGTINWFREAFKK-DRKFN 160
Cdd:cd02661    3 GLQNLGNTCFLNSVLQCLTHTPPLANYLLSREhskdcCNEGFCMMCALEahvERALASSGPGSAPRIFSSNLKQiSKHFR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 161 QGRQEDAHDALLAILGKLDKI-------SVQSNPRLKGRKVADDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMLrkd 233
Cdd:cd02661   83 IGRQEDAHEFLRYLLDAMQKAcldrfkkLKAVDPSSQETTLVQQIFGGYLRSQVKCLNCKHVSNTYDPFLDLSLDIK--- 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 234 psgKSHSIKELMQALFTESKIFG---YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFDGwGKKISRPVTLNETLDVT 310
Cdd:cd02661  160 ---GADSLEDALEQFTKPEQLDGenkYKCERCKKKVKASKQLTIHRAPNVLTIHLKRFSNFR-GGKINKQISFPETLDLS 235
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 453232370 311 SMAT--AGASTVYKLCGAVIHGGTTLDYGHYWCVARSrkREEQFVTLNDSSVSQhTNPRDAL--QSYIVLY 377
Cdd:cd02661  236 PYMSqpNDGPLKYKLYAVLVHSGFSPHSGHYYCYVKS--SNGKWYNMDDSKVSP-VSIETVLsqKAYILFY 303
Peptidase_C19R cd02674
A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
163-378 1.89e-23

A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239139 [Multi-domain]  Cd Length: 230  Bit Score: 97.36  E-value: 1.89e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 163 RQEDAHDALLAILGKLDKIsvqsnprlkgrkvADDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVRMLRKDPSGKSHSIK 242
Cdd:cd02674   21 DQQDAQEFLLFLLDGLHSI-------------IVDLFQGQLKSRLTCLTCGKTSTTFEPFTYLSLPIPSGSGDAPKVTLE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 243 ELMQALFTESKIFGYN---CSKCKKKSDAPVKPTLLRAPQILLMHISRFSFD-GWGKKISRPVTLN-ETLDVTSMATAGA 317
Cdd:cd02674   88 DCLRLFTKEETLDGDNawkCPKCKKKRKATKKLTISRLPKVLIIHLKRFSFSrGSTRKLTTPVTFPlNDLDLTPYVDTRS 167
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 453232370 318 ST---VYKLCGAVIHGGtTLDYGHYWCVARSRKREEQFVtLNDSSVSQhTNPRDAL--QSYIVLYR 378
Cdd:cd02674  168 FTgpfKYDLYAVVNHYG-SLNGGHYTAYCKNNETNDWYK-FDDSRVTK-VSESSVVssSAYILFYE 230
Peptidase_C19B cd02658
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
90-378 2.98e-18

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239123 [Multi-domain]  Cd Length: 311  Bit Score: 84.68  E-value: 2.98e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  90 GIQNPSIYCYAISCVQLLSHVPA---------------IVRILQDHQCQDT----ACLCCNWKKNFLQSHGHAGTINWFR 150
Cdd:cd02658    1 GLRNLGNSCYLNSVLQVLFSIPSfqwryddlenkfpsdVVDPANDLNCQLIkladGLLSGRYSKPASLKSENDPYQVGIK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 151 -EAFKK-----DRKFNQGRQEDAHDALLAILGKLDKISVQ---SNPrlkgrkvaDDLFGYSIRNEVQCPGCKnkHVYY-- 219
Cdd:cd02658   81 pSMFKAligkgHPEFSTMRQQDALEFLLHLIDKLDRESFKnlgLNP--------NDLFKFMIEDRLECLSCK--KVKYts 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 220 EHNTVMTVRMLRKDPSGKSHSIK-----ELMQAL--FTESKIFGYNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFD- 291
Cdd:cd02658  151 ELSEILSLPVPKDEATEKEEGELvyepvPLEDCLkaYFAPETIEDFCSTCKEKTTATKTTGFKTFPDYLVINMKRFQLLe 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 292 GWgkkisRPVTLNETLDVTSMATAGAstvYKLCGAVIHGGTTLDYGHYwcVARSRKR---EEQFVTLNDSSVSQHTNPRD 368
Cdd:cd02658  231 NW-----VPKKLDVPIDVPEELGPGK---YELIAFISHKGTSVHSGHY--VAHIKKEidgEGKWVLFNDEKVVASQDPPE 300
                        330
                 ....*....|.
gi 453232370 369 ALQ-SYIVLYR 378
Cdd:cd02658  301 MKKlGYIYFYQ 311
Peptidase_C19L cd02668
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
90-365 1.53e-17

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239133 [Multi-domain]  Cd Length: 324  Bit Score: 82.85  E-value: 1.53e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  90 GIQNPSIYCYAISCVQLLSHVPAIVRILQDHQCQDTACLCCNWKKNFLQSHG------------HAGTINWFR-EAFKKD 156
Cdd:cd02668    1 GLKNLGATCYVNSFLQLWFMNLEFRKAVYECNSTEDAELKNMPPDKPHEPQTiidqlqlifaqlQFGNRSVVDpSGFVKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 157 RKFNQGRQEDAHDALLAILGKL-DKISVQSNPrlKGRKVADDLFGYSIRNEVQCPGCKNKHV----YYEhntvmtVRMLR 231
Cdd:cd02668   81 LGLDTGQQQDAQEFSKLFLSLLeAKLSKSKNP--DLKNIVQDLFRGEYSYVTQCSKCGRESSlpskFYE------LELQL 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 232 KDPSGKSHSIKELmqalFTESKIFG---YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFD---GWGKKISRPVTLNE 305
Cdd:cd02668  153 KGHKTLEECIDEF----LKEEQLTGdnqYFCESCNSKTDATRRIRLTTLPPTLNFQLLRFVFDrktGAKKKLNASISFPE 228
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 453232370 306 TLDVTS--MATAGASTVYKLCGAVIHGGTTLDYGHYWCVARSRKREEqFVTLNDSSVSQHTN 365
Cdd:cd02668  229 ILDMGEylAESDEGSYVYELSGVLIHQGVSAYSGHYIAHIKDEQTGE-WYKFNDEDVEEMPG 289
Peptidase_C19D cd02660
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
89-361 3.84e-16

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239125 [Multi-domain]  Cd Length: 328  Bit Score: 78.57  E-value: 3.84e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  89 KGIQNPSIYCYAISCVQLLSHVPAIVRIL--QDHQCQD-----TACLCCNWKKNFLQSHGHA-----GTINWFREAFKKD 156
Cdd:cd02660    1 RGLINLGATCFMNVILQALLHNPLLRNYFlsDRHSCTClscspNSCLSCAMDEIFQEFYYSGdrspyGPINLLYLSWKHS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 157 RKFNQGRQEDAHDALLAILGKLDKISVQSNPRLKGRK----VADDLFGYSIRNEVQCPGCKNkhvyyEHNTV-------M 225
Cdd:cd02660   81 RNLAGYSQQDAHEFFQFLLDQLHTHYGGDKNEANDEShcncIIHQTFSGSLQSSVTCQRCGG-----VSTTVdpfldlsL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 226 TVRMLRKDPSGKSHSIKELMQAL------FTES---KIFGYNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFDGWG-- 294
Cdd:cd02660  156 DIPNKSTPSWALGESGVSGTPTLsdcldrFTRPeklGDFAYKCSGCGSTQEATKQLSIKKLPPVLCFQLKRFEHSLNKts 235
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 453232370 295 KKISRPVTLNETLDVTSMATAGAST-----------VYKLCGAVIHGGtTLDYGHYWCVarSRKREEQFVTLNDSSVS 361
Cdd:cd02660  236 RKIDTYVQFPLELNMTPYTSSSIGDtqdsnsldpdyTYDLFAVVVHKG-TLDTGHYTAY--CRQGDGQWFKFDDAMIT 310
peptidase_C19C cd02659
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
90-373 3.31e-14

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239124 [Multi-domain]  Cd Length: 334  Bit Score: 73.06  E-value: 3.31e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  90 GIQNPSIYCYAISCVQLLSHVP----AIVRILQDHQCQDTACLCCNWKKNFLQSH-GHAGTINwfREAFKKDRKF----- 159
Cdd:cd02659    4 GLKNQGATCYMNSLLQQLYMTPefrnAVYSIPPTEDDDDNKSVPLALQRLFLFLQlSESPVKT--TELTDKTRSFgwdsl 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 160 NQGRQEDAHDALLAILGKLDKISVQsnprLKGRKVADDLFGYSIRNEVQCPGCKNKHVYYEHNTVMTVrmlrkDPSGKSh 239
Cdd:cd02659   82 NTFEQHDVQEFFRVLFDKLEEKLKG----TGQEGLIKNLFGGKLVNYIICKECPHESEREEYFLDLQV-----AVKGKK- 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 240 SIKELMQALFTESKIFG---YNCSKCKKKSDApVKPTLLRA-PQILLMHISRFSFD---GWGKKI----SRPVTLN---- 304
Cdd:cd02659  152 NLEESLDAYVQGETLEGdnkYFCEKCGKKVDA-EKGVCFKKlPPVLTLQLKRFEFDfetMMRIKIndrfEFPLELDmepy 230
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 453232370 305 -----ETLDVTSMATAGASTVYKLCGAVIHGGtTLDYGHYWCVARSRKREEQFVtLNDSSVSQHTNPRDALQSY 373
Cdd:cd02659  231 tekglAKKEGDSEKKDSESYIYELHGVLVHSG-DAHGGHYYSYIKDRDDGKWYK-FNDDVVTPFDPNDAEEECF 302
Peptidase_C19F cd02662
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
90-346 2.10e-13

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239127 [Multi-domain]  Cd Length: 240  Bit Score: 69.32  E-value: 2.10e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  90 GIQNPSIYCYAISCVQLLSHVPAIVRILqdhqcqdtaclccnwkknflqshghagtiNWFREafkkdrkfnqgrQEDAHD 169
Cdd:cd02662    1 GLVNLGNTCFMNSVLQALASLPSLIEYL-----------------------------EEFLE------------QQDAHE 39
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 170 ALLAILGKLDKISvqSNPRlkgrkvaDDLFGYSIRnevqCPGCKNK-HVYYEHNTVMTVRmLRKDPSGKSHSIKELMQAL 248
Cdd:cd02662   40 LFQVLLETLEQLL--KFPF-------DGLLASRIV----CLQCGESsKVRYESFTMLSLP-VPNQSSGSGTTLEHCLDDF 105
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 249 FTESKIFGYNCSKCKKKsdapvkptLLRAPQILLMHISRFSFDGWG--KKISRPVTLNETLDVTSmatagastvYKLCGA 326
Cdd:cd02662  106 LSTEIIDDYKCDRCQTV--------IVRLPQILCIHLSRSVFDGRGtsTKNSCKVSFPERLPKVL---------YRLRAV 168
                        250       260
                 ....*....|....*....|
gi 453232370 327 VIHGGTTlDYGHYWCVARSR 346
Cdd:cd02662  169 VVHYGSH-SSGHYVCYRRKP 187
Peptidase_C19H cd02664
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
159-378 9.65e-12

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239129 [Multi-domain]  Cd Length: 327  Bit Score: 65.59  E-value: 9.65e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 159 FNQGRQEDAHDALLAILGKLDKIsvqsnprlkgrkvADDLFGYSIRNEVQCPGCknkhvyyeHNTVMTVRMLRkDPSGKS 238
Cdd:cd02664   76 FTPGSQQDCSEYLRYLLDRLHTL-------------IEKMFGGKLSTTIRCLNC--------NSTSARTERFR-DLDLSF 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 239 HSIKELMQALFTESKIFG---YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFD---GWGKKISRPVTLNETLDVT-- 310
Cdd:cd02664  134 PSVQDLLNYFLSPEKLTGdnqYYCEKCASLQDAEKEMKVTGAPEYLILTLLRFSYDqktHVREKIMDNVSINEVLSLPvr 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 311 ---------------SMATAGASTV----YKLCGAVIHGGTTLDYGHYWCVARSRK---------------REEQF---- 352
Cdd:cd02664  214 veskssesplekkeeESGDDGELVTrqvhYRLYAVVVHSGYSSESGHYFTYARDQTdadstgqecpepkdaEENDEsknw 293
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 453232370 353 VTLNDSSVSQHT----------NPRDAlqSYIVLYR 378
Cdd:cd02664  294 YLFNDSRVTFSSfesvqnvtsrFPKDT--PYILFYE 327
Peptidase_C19A cd02657
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
90-378 4.34e-08

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239122 [Multi-domain]  Cd Length: 305  Bit Score: 54.26  E-value: 4.34e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  90 GIQNPSIYCYAISCVQLLSHVPAIVRILQDHQ------CQDTACLCCNWKKNF--LQSHGHAGT----INWFREAF---- 153
Cdd:cd02657    1 GLTNLGNTCYLNSTLQCLRSVPELRDALKNYNparrgaNQSSDNLTNALRDLFdtMDKKQEPVPpiefLQLLRMAFpqfa 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 154 KKDRKfNQGRQEDAHDALLAILGKLdkisvQSNPRLKGRK--VADDLFGYSIRNEVQC------PGCKNKHVYYEH---N 222
Cdd:cd02657   81 EKQNQ-GGYAQQDAEECWSQLLSVL-----SQKLPGAGSKgsFIDQLFGIELETKMKCtespdeEEVSTESEYKLQchiS 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 223 TVMTVRMLRkdpSGKSHSIKELMQALfteSKIFGYNcSKCKKKSdapvkpTLLRAPQILLMHISRFSfdgWGK------K 296
Cdd:cd02657  155 ITTEVNYLQ---DGLKKGLEEEIEKH---SPTLGRD-AIYTKTS------RISRLPKYLTVQFVRFF---WKRdiqkkaK 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 297 ISRPVTLNETLDVTSMATAgaSTVYKLCGAVIHGGTTLDYGHYwcVARSRKRE-EQFVTLNDSSVSQHTnPRDALQS--- 372
Cdd:cd02657  219 ILRKVKFPFELDLYELCTP--SGYYELVAVITHQGRSADSGHY--VAWVRRKNdGKWIKFDDDKVSEVT-EEDILKLsgg 293
                        330
                 ....*....|..
gi 453232370 373 ------YIVLYR 378
Cdd:cd02657  294 gdwhiaYILLYK 305
UCH_1 pfam13423
Ubiquitin carboxyl-terminal hydrolase;
91-339 5.43e-07

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 463872 [Multi-domain]  Cd Length: 305  Bit Score: 50.73  E-value: 5.43e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370   91 IQNpsiyCYAISCVQLLSHVPAIVRILQDHQ---CQDTACLCC----------NWKK------NFLQ---SHGHAGTINW 148
Cdd:pfam13423   7 IPN----SYTNSLLQLLRFIPPLRNLALSHLateCLKEHCLLCelgflfdmleKAKGkncqasNFLRalsSIPEASALGL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  149 FREafkkdrkfnqGRQEDAHDALLAILGK-----LDKISVQSNPRLKGRKVA----DDLFGYSIRNEVQCPGCKNKHVyy 219
Cdd:pfam13423  83 LDE----------DRETNSAISLSSLIQSfnrflLDQLSSEENSTPPNPSPAesplEQLFGIDAETTIRCSNCGHESV-- 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370  220 EHNTVMTVRML------RKDPSGKSHSIKELMQA-LFTESKIFGYnCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFDg 292
Cdd:pfam13423 151 RESSTHVLDLIyprkpsSNNKKPPNQTFSSILKSsLERETTTKAW-CEKCKRYQPLESRRTVRNLPPVLSLNAALTNEE- 228
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 453232370  293 WGKKISRPVTLNETLDVT---SMATAGASTVYKLCGAVIHGGTTLDYGHY 339
Cdd:pfam13423 229 WRQLWKTPGWLPPEIGLTlsdDLQGDNEIVKYELRGVVVHIGDSGTSGHL 278
Peptidase_C19Q cd02673
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
159-377 3.17e-06

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239138 [Multi-domain]  Cd Length: 245  Bit Score: 47.91  E-value: 3.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 159 FNQGRQEDAHDALLAILGKLDKIsVQSNPRLKGRKVAD-------DLFGYSIRNEVQCPGCKNkhvyyEHNTVMTVRMLR 231
Cdd:cd02673   28 FDNDDQQDAHEFLLTLLEAIDDI-MQVNRTNVPPSNIEikrlnplEAFKYTIESSYVCIGCSF-----EENVSDVGNFLD 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 232 KDPSGKSHSIKELMQALFTESKIFGYNCSKCKKKSdAPVKPTLLRAPQILLMHISRFSFD---GWGKKISRPVTLNETLD 308
Cdd:cd02673  102 VSMIDNKLDIDELLISNFKTWSPIEKDCSSCKCES-AISSERIMTFPECLSINLKRYKLRiatSDYLKKNEEIMKKYCGT 180
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 453232370 309 VTSmatagastvYKLCGAVIHGGTTLDYGHYWCVARSRKREEQFVTLNDSS---VSQHTNPRDALQS-YIVLY 377
Cdd:cd02673  181 DAK---------YSLVAVICHLGESPYDGHYIAYTKELYNGSSWLYCSDDEirpVSKNDVSTNARSSgYLIFY 244
Peptidase_C19G cd02663
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
149-377 3.43e-06

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239128 [Multi-domain]  Cd Length: 300  Bit Score: 48.46  E-value: 3.43e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 149 FREAFKKDRK-FNQGRQEDAHDALLAILGKLDKI-------------SVQSNPRLKGRKVADDLFGYSIRNEVQCPGCKN 214
Cdd:cd02663   49 FITRLKRENElFDNYMHQDAHEFLNFLLNEIAEIldaerkaekanrkLNNNNNAEPQPTWVHEIFQGILTNETRCLTCET 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 215 ---KH-------VYYEHNTVMTvRMLRkdpsgkSHSIKELMQAlftESKIFgynCSKCKKKSDAPVKPTLLRAPQILLMH 284
Cdd:cd02663  129 vssRDetfldlsIDVEQNTSIT-SCLR------QFSATETLCG---RNKFY---CDECCSLQEAEKRMKIKKLPKILALH 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 285 ISRFSFD---GWGKKISRPVTLNETLDV--TSMATAGASTVYKLCGAVIHGGTTLDYGHYWCVARSRKREEQF----VTL 355
Cdd:cd02663  196 LKRFKYDeqlNRYIKLFYRVVFPLELRLfnTTDDAENPDRLYELVAVVVHIGGGPNHGHYVSIVKSHGGWLLFddetVEK 275
                        250       260
                 ....*....|....*....|....
gi 453232370 356 -NDSSVSQHTNPRDALQS-YIVLY 377
Cdd:cd02663  276 iDENAVEEFFGDSPNQATaYVLFY 299
Peptidase_C19O cd02671
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
230-339 1.18e-05

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239136 [Multi-domain]  Cd Length: 332  Bit Score: 46.81  E-value: 1.18e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 230 LRKDPSGKSHSIKELMQALFTESKIFG---YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFS-----FDGWG--KKISR 299
Cdd:cd02671  171 ISPDPKTEMKTLKWAISQFASVERIVGedkYFCENCHHYTEAERSLLFDKLPEVITIHLKCFAangseFDCYGglSKVNT 250
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 453232370 300 PVTLNETLDVTSMATAGASTVYKLCGAVIHGGTTLDYGHY 339
Cdd:cd02671  251 PLLTPLKLSLEEWSTKPKNDVYRLFAVVMHSGATISSGHY 290
UBP12 COG5560
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
248-380 4.82e-04

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 42.18  E-value: 4.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 248 LFTESKIFG----YNCSKCKKKSDAPVKPTLLRAPQILLMHISRFSFDgwgkkISRPVTLNETLD--VTSMATAGAsTVY 321
Cdd:COG5560  683 EFSKPEQLGlsdsWYCPGCKEFRQASKQMELWRLPMILIIHLKRFSSV-----RSFRDKIDDLVEypIDDLDLSGV-EYM 756
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 453232370 322 KLCGAVI---------HGGTTldYGHYWCVARsRKREEQFVTLNDSSVSQhTNPRDALQS--YIVLYRRR 380
Cdd:COG5560  757 VDDPRLIydlyavdnhYGGLS--GGHYTAYAR-NFANNGWYLFDDSRITE-VDPEDSVTSsaYVLFYRRK 822
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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