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Conserved domains on  [gi|24668022|ref|NP_730622|]
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uncharacterized protein Dmel_CG32436 [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK00247 super family cl31999
putative inner membrane protein translocase component YidC; Validated
 1062-1130 9.16e-03

putative inner membrane protein translocase component YidC; Validated


The actual alignment was detected with superfamily member PRK00247:

Pssm-ID: 178945 [Multi-domain]  Cd Length: 429  Bit Score: 40.60  E-value: 9.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24668022  1062 NNLHGRFRPWR-----------KEDDDKEVKQETARQKRLREQRLEKMRYIDEElqKEKERIQMFLKAKQEHMDRKAGIK 1130
Cdd:PRK00247  311 NRLRMIITPWRapelhaenaeiKKTRTAEKNEAKARKKEIAQKRRAAEREINRE--ARQERAAAMARARARRAAVKAKKK 388
 
Name Accession Description Interval E-value
PRK00247 PRK00247
putative inner membrane protein translocase component YidC; Validated
 1062-1130 9.16e-03

putative inner membrane protein translocase component YidC; Validated


Pssm-ID: 178945 [Multi-domain]  Cd Length: 429  Bit Score: 40.60  E-value: 9.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24668022  1062 NNLHGRFRPWR-----------KEDDDKEVKQETARQKRLREQRLEKMRYIDEElqKEKERIQMFLKAKQEHMDRKAGIK 1130
Cdd:PRK00247  311 NRLRMIITPWRapelhaenaeiKKTRTAEKNEAKARKKEIAQKRRAAEREINRE--ARQERAAAMARARARRAAVKAKKK 388
 
Name Accession Description Interval E-value
PRK00247 PRK00247
putative inner membrane protein translocase component YidC; Validated
 1062-1130 9.16e-03

putative inner membrane protein translocase component YidC; Validated


Pssm-ID: 178945 [Multi-domain]  Cd Length: 429  Bit Score: 40.60  E-value: 9.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24668022  1062 NNLHGRFRPWR-----------KEDDDKEVKQETARQKRLREQRLEKMRYIDEElqKEKERIQMFLKAKQEHMDRKAGIK 1130
Cdd:PRK00247  311 NRLRMIITPWRapelhaenaeiKKTRTAEKNEAKARKKEIAQKRRAAEREINRE--ARQERAAAMARARARRAAVKAKKK 388
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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