|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
49-661 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1184.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 49 SKQYPVVDHAYDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVKGSD 128
Cdd:PTZ00139 20 SSAYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSD 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 129 WLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLKFGKGGQAHRCCAVADRTGHSLLHTLYGQSLSY 208
Cdd:PTZ00139 100 WLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKY 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 209 DCNYFVEYFALDLIF-EDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDL 287
Cdd:PTZ00139 180 DCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPLQDL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 288 EFVQFHPTGIYGAGCLITEGCRGEGGYLINGNGERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKDHVYLQLHH 367
Cdd:PTZ00139 260 EFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGCGPNKDHIYLDLTH 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 368 LPPKQLAERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYRGQVITIDKDGKDVIVPGLYAAGEAASSSVHGA 447
Cdd:PTZ00139 340 LPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDDDKIVPGLLAAGEAACASVHGA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 448 NRLGANSLLDLVVFGRACAKTIAELNKPGAPAPTLKENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDG 527
Cdd:PTZ00139 420 NRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQRTMQKHAAVFRIG 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 528 PILQDGVNKMKEIYKQFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEydfskp 607
Cdd:PTZ00139 500 ESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDK------ 573
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 24655642 608 ldgqqkkpmdqHWRKHTLSWVCNDN-GDITLDYRNVIDTTLDNEVSTVPPAIRSY 661
Cdd:PTZ00139 574 -----------NWMKHTLSYIRDVKkGKVRLTYRPVITTPLDNEMETVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
21-661 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 1065.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 21 RAAAVGVQRSYHITHGRQQASAANPDKISKQYPVVDHAYDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAA 100
Cdd:PLN00128 13 LASSSASSSLASASLRTALSRFFSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 101 QGGINAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLKFGKG 180
Cdd:PLN00128 93 QGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKG 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 181 GQAHRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIF-EDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRA 259
Cdd:PLN00128 173 GQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMdSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 260 FFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINGNGERFMERYAPVAKDLASRDV 339
Cdd:PLN00128 253 YFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDV 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 340 VSRSMTIEIMEGRGAGPEKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYRGQVI 419
Cdd:PLN00128 333 VSRSMTMEIREGRGVGPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVV 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 420 TIDKDGKDVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAELNKPGAPAPTLKENAGEASVANLDKLRH 499
Cdd:PLN00128 413 TIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRN 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 500 ANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVS 579
Cdd:PLN00128 493 ANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHS 572
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 580 AEARKESRGAHAREDFKVREDEydfskpldgqqkkpmdqHWRKHTLSWVcnDNGDITLDYRNVIDTTLDNEVSTVPPAIR 659
Cdd:PLN00128 573 AEARKESRGAHAREDFTKRDDE-----------------NWMKHTLGYW--EEGKVRLDYRPVHMNTLDDEVETFPPKAR 633
|
..
gi 24655642 660 SY 661
Cdd:PLN00128 634 VY 635
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
80-661 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 966.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 80 EGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSR 159
Cdd:TIGR01816 4 GGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMPFSR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 160 TQDGKIYQRAFGGQSLKFGKGGQAHRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIFEDGECRGVLALNLEDG 239
Cdd:TIGR01816 84 TEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCLETG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 240 TLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINGN 319
Cdd:TIGR01816 164 EIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILINAN 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 320 GERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPV 399
Cdd:TIGR01816 244 GERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDPIPV 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 400 LPTVHYNMGGVPTNYRGQVITiDKDGKDVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAELNKPGAPA 479
Cdd:TIGR01816 324 LPTVHYNMGGIPTNYHGQVLR-DGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPGSDV 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 480 PTLKENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWNSD 559
Cdd:TIGR01816 403 KPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVWNTD 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 560 LVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEydfskpldgqqkkpmdqHWRKHTLSWVCNDNGDITLDY 639
Cdd:TIGR01816 483 LVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDE-----------------NWLKHTLSYVDINTGKVLLSY 545
|
570 580
....*....|....*....|..
gi 24655642 640 RNVIDTTLDneVSTVPPAIRSY 661
Cdd:TIGR01816 546 KPVIFKPLT--VADFEPKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
80-661 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 788.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 80 EGFRTAVITKLFPTRSHTIAAQGGINAALGNME-EDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFS 158
Cdd:TIGR01812 21 AGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDpDDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHWGVPFS 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 159 RTQDGKIYQRAFGGQSLKfgkggqahRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIFEDGECRGVLALNLED 238
Cdd:TIGR01812 101 RTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLKT 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 239 GTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLING 318
Cdd:TIGR01812 173 GEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVNK 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 319 NGERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAG-PEKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPI 397
Cdd:TIGR01812 253 NGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEPI 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 398 PVLPTVHYNMGGVPTNYRGQVITidkdgkDVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAE-LNKPG 476
Cdd:TIGR01812 333 PVRPTAHYSMGGIPTDYTGRVIC------ETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEyAAKTG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 477 APAPTLKENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIW 556
Cdd:TIGR01812 407 NPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRINDKSKVF 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 557 NSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEydfskpldgqqkkpmdqHWRKHTLSWVCNDnGDIT 636
Cdd:TIGR01812 487 NTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDE-----------------NWLKHTLAYYDNP-GTPR 548
|
570 580
....*....|....*....|....*
gi 24655642 637 LDYRNVIDTTLdnevstvPPAIRSY 661
Cdd:TIGR01812 549 LEYKPVTITKY-------EPAERKY 566
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
85-661 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 566.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 85 AVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGK 164
Cdd:PRK06069 35 AVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPWSRRPDGR 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 165 IYQRAFGGQSLKfgkggqahRCCAVADRTGHSLLHTLYGQSLSYD-CNYFVEYFALDLIFEDGECRGVLALNLEDGTLHR 243
Cdd:PRK06069 115 ISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRFDnIHFYDEHFVTSLIVENGVFKGVTAIDLKRGEFKV 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 244 FRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINGNGERF 323
Cdd:PRK06069 187 FQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLINKEGERF 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 324 MERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKD--HVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPVLP 401
Cdd:PRK06069 267 MKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlcYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVTEPIPVRP 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 402 TVHYNMGGVPTNYRGQVITIDKDGkdviVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGR----ACAKTIAELNKPGA 477
Cdd:PRK06069 347 AAHYTMGGIHTDVYGRVLTADGEW----VRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRiageQAAEYALKRPAPSS 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 478 PAPTLKENAgEASVanLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWN 557
Cdd:PRK06069 423 PVEKLAEKE-EKRI--FDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDKSRIYN 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 558 SDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEydfskpldgqqkkpmdqHWRKHTLSWVcnDNGDITL 637
Cdd:PRK06069 500 TDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDE-----------------NWLKHTLAYY--TGGGPKV 560
|
570 580
....*....|....*....|....
gi 24655642 638 DYRNVidttldnEVSTVPPAIRSY 661
Cdd:PRK06069 561 TYTPV-------TITKWKPEERKY 577
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
85-661 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 538.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 85 AVITKLFPTRSHTIAAQGGINAALGNME-EDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDG 163
Cdd:PRK05945 32 AVVAKTHPIRSHSVAAQGGIAASLKNVDpEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRLPDG 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 164 KIYQRAFGGQSLKfgkggqahRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIFEDGECRGVLALNLEDGTLHR 243
Cdd:PRK05945 112 RIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGRLEV 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 244 FRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINGNGERF 323
Cdd:PRK05945 184 VRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGDRF 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 324 MERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPE----KDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPV 399
Cdd:PRK05945 264 MADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEPMPV 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 400 LPTVHYNMGGVPTNYRGQVitidKDGKDVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAELnKPGAPA 479
Cdd:PRK05945 344 RPTVHYCMGGIPVNTDGRV----RRSADGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEY-VQGRKL 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 480 PTLKENAG-EASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWNS 558
Cdd:PRK05945 419 PEVDEQRYlKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKCWNT 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 559 DLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREdeydfskpldgqqkkpmDQHWRKHTLSWvCNDNGdITLD 638
Cdd:PRK05945 499 ELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRD-----------------DQNFLKHTLAY-YSPAG-IDIQ 559
|
570 580
....*....|....*....|...
gi 24655642 639 YRNVIdttldneVSTVPPAIRSY 661
Cdd:PRK05945 560 YMPVV-------ITMFEPQERKY 575
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
83-661 |
1.43e-170 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 499.55 E-value: 1.43e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 83 RTAVITKLFPTRSHTIAAQGGinAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQD 162
Cdd:PRK09231 31 KIALISKVYPMRSHTVAAEGG--SAAVAQDHDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKPD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 163 GKIYQRAFGGQSLKfgkggqahRCCAVADRTGHSLLHTLYGQSLSY-DCNYFVEYFALDLIFEDGECRGVLALNLEDGTL 241
Cdd:PRK09231 109 GSVNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 242 HRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINGNGE 321
Cdd:PRK09231 181 VQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGY 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 322 RFMERYA-----PVAK------DLASRDVVSRSMTIEIMEGRG-AGPEKDHVYLQLHHLPPKQLAERLPGISETAMIFAG 389
Cdd:PRK09231 261 RYLQDYGlgpetPLGEpknkymELGPRDKVSQAFWHEWRKGNTiSTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVG 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 390 VDVTREPIPVLPTVHYNMGGVPTNYRGQvitidkdgkdVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTI 469
Cdd:PRK09231 341 VDPVKEPIPVRPTAHYTMGGIETDQNCE----------TRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQA 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 470 AE--LNKPGAPAPTLKENAgEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDI 547
Cdd:PRK09231 411 AEraATAGPGNEAALDAQA-ADVEQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRV 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 548 KVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHARedfkvredeydfskpLDGQQKKPMDQHWRKHTLSW 627
Cdd:PRK09231 490 RITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQR---------------LDEGCTERDDVNFLKHTLAF 554
|
570 580 590
....*....|....*....|....*....|....
gi 24655642 628 VcNDNGDITLDYRNVIDTTLdnevstvPPAIRSY 661
Cdd:PRK09231 555 Y-NADGTPRIEYSDVKITKS-------PPAKRVY 580
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
79-602 |
8.31e-153 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 451.87 E-value: 8.31e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 79 AEGFRTAVITKLFPTRSHTIAAQGGINAALGnmEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFS 158
Cdd:COG0029 24 AERGRVTLLTKGELGESNTRWAQGGIAAVLD--PGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELGVPFD 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 159 RTQDGKIYQRAFGGQSlkfgkggqAHRCCAVADRTGHSLLHTLYGQSLSYDcN--YFVEYFALDLIFE-DGECRGVLALN 235
Cdd:COG0029 102 RDEDGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHP-NitVLENHFAVDLITDaDGRCVGAYVLD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 236 LEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC---LITEGCRGEG 312
Cdd:COG0029 173 EKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISEAVRGEG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 313 GYLINGNGERFMERYAPVAkDLASRDVVSRSMTIEIMEGRGagpekDHVYLQLHHLPPKQLAERLPGISETAMIFaGVDV 392
Cdd:COG0029 253 AVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYARCLEL-GIDI 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 393 TREPIPVLPTVHYNMGGVPTNYRGQviTiDkdgkdviVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAEL 472
Cdd:COG0029 326 TKEPIPVAPAAHYTMGGVATDLDGR--T-S-------IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAEDIAAR 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 473 NKPGAPAPTLKENAgeasvanlDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDR 552
Cdd:COG0029 396 LAESPLPPEIPEWD--------ESVTDPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREEIEEYANFRV 467
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 24655642 553 SliwnsdlVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEY 602
Cdd:COG0029 468 S-------RDLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPAW 510
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
59-636 |
9.68e-148 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 440.48 E-value: 9.68e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 59 YDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAAL-GNMEEDDWKWHM-YDTVKGSDWLGDQDAI 136
Cdd:PRK06452 6 YDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDPNDNPDYMtYDTVKGGDYLVDQDAA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 137 HYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLKfgkggqahRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEY 216
Cdd:PRK06452 86 ELLSNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 217 FALDLIFEDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTG 296
Cdd:PRK06452 158 FSLDLVTDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 297 IYGAGCLITEGCRGEGGYLINGNGERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAgpEKDHVYLQLHHLPPKQLAER 376
Cdd:PRK06452 238 LYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF--PGGYVGLDLTHLGEEYIKER 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 377 LPGISETAMIFAGVDVTREPIPVLPTVHYNMGGvptnyrgqvITIDKDGKDVIVPGLYAAGEAASSSVHGANRLGANSLL 456
Cdd:PRK06452 316 LALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGG---------IDVDIDGRNPDIVGLFSAGEAACVSVHGANRLGSNSLL 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 457 DLVVFGRACAKTIAELNKPGAPAPTLK-ENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVN 535
Cdd:PRK06452 387 DTLVFGQVTGRTVVQFLKSNPGNPTSNyEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLNAMS 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 536 KMKEIYKQFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREdeydfskpldgqqkkp 615
Cdd:PRK06452 467 EINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRD---------------- 530
|
570 580
....*....|....*....|.
gi 24655642 616 mDQHWRKHTLSWVCNDNGDIT 636
Cdd:PRK06452 531 -DNNWLKHTIAYLRGNTVEVT 550
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
80-661 |
5.58e-139 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 420.92 E-value: 5.58e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 80 EGFRTAVITKLFPTRSHTIAAQGGINAALGN--MEE-DDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMP 156
Cdd:PRK08626 27 RGLDTIVLSLVPAKRSHSAAAQGGMQASLGNavKGEgDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGVP 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 157 FSRTQDGK---------------------IYQRAFGGQSlKFgkggqahRCCAVADRTGHSLLHTLYGQSLSYDCNYFVE 215
Cdd:PRK08626 107 WTRVTAGPrtvvingekvtitekeeahglINARDFGGTK-KW-------RTCYTADGTGHTMLYAVDNEAIKLGVPVHDR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 216 YFALDLIFEDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGL-PSQDLEFVQFHP 294
Cdd:PRK08626 179 KEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFHP 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 295 TGIYGAGCLITEGCRGEGGYLINGNGERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGA-GPEKDHVYLQLHHLPPKQL 373
Cdd:PRK08626 259 TAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGRKHI 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 374 AERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYRGQVITIDkdgkdvivpGLYAAGEAASSSVHGANRLGAN 453
Cdd:PRK08626 339 ETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESYGLK---------GLFSAGEAACWDMHGFNRLGGN 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 454 SLLDLVVFGRACAKTIAE--LNKPGAPAPTLKENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQ 531
Cdd:PRK08626 410 SLAETVVAGMIVGKYVADfcLGNELEIDTALVEKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPELE 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 532 DGVNKMKEIYKQFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREdeydfskpldgq 611
Cdd:PRK08626 490 KAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRN------------ 557
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 24655642 612 qkkpmDQHWRKHTL-SWVCNDNGDITLDYRNvidttLDNEVSTVPPAIRSY 661
Cdd:PRK08626 558 -----DRDWLNRTLaSWPEGEALEPTLEYEP-----LDVMKMELPPGFRGY 598
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
80-471 |
2.87e-136 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 406.53 E-value: 2.87e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 80 EGFRTAVITKLFPTRSHTIAAQGGINAALGNME----EDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGM 155
Cdd:COG1053 25 AGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQkaagEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWLEAQGV 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 156 PFSRTQDGKIYQraFGGQSlkfgkggqAHRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIFEDGECRGVLALN 235
Cdd:COG1053 105 PFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVDDGRVVGVVARD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 236 lEDGTLHRFRAKNTVIATGGYGRAF------------FSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCL 303
Cdd:COG1053 175 -RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGDGGL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 304 ITEGCRG-EGGYLINGNGERFMERYAPvakdlasRDVVSRSMTIEIMEG------------------RGAGPEKDHVylq 364
Cdd:COG1053 254 ISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPaylvldlrhrrrleeyleAGYLVKADTI--- 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 365 lhhlppKQLAERLpGISETAMIF----------AGVDVTRE-----------PIPVLPTVHYNMGGVPTNYRGQVItiDK 423
Cdd:COG1053 324 ------EELAAKL-GIDAAELAAtvarynaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVL--DA 394
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 24655642 424 DGKdvIVPGLYAAGEAASSsVHGANRLGANSLLDLVVFGRACAKTIAE 471
Cdd:COG1053 395 DGT--PIPGLYAAGEAAGS-VHGANRLGGNSLGDALVFGRIAGRHAAE 439
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
97-602 |
4.31e-136 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 409.76 E-value: 4.31e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 97 TIAAQGGINAALGnmEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLK 176
Cdd:PRK06263 46 TVMAEGGYNAVLN--PEDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSFN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 177 fgkggqahRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIFEDG-ECRGVLALNLEDGTLHRFRAKNTVIATGG 255
Cdd:PRK06263 124 --------RTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVDENrEVIGAIFLDLRNGEIFPIYAKATILATGG 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 256 YGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGI----YGAGCLITEGCRGEGGYLINGNGERFMERYAPVA 331
Cdd:PRK06263 196 AGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPER 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 332 KDLASRDVVSRSMTIEIMEGRGAgpekDH--VYLQLHHLPPKQLAERLPGISETAMIFaGVDVTREPIPVLPTVHYNMGG 409
Cdd:PRK06263 276 MELSTRDVVARAIYTEIQEGRGT----NHggVYLDVTHLPDEVIEEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGG 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 410 VPtnyrgqvitIDKDGKDVIvPGLYAAGEAAsSSVHGANRLGANSLLDLVVFGR---ACAKTIAELNKPGAPAPTLKENa 486
Cdd:PRK06263 351 IR---------INEDCETNI-PGLFACGEVA-GGVHGANRLGGNALADTQVFGAiagKSAAKNAENNEFKKVNRSVEED- 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 487 gEASVANLDKLRhaNGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRsliwnSDLVETLEL 566
Cdd:PRK06263 419 -IARIKSEIKFL--NGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVNGI-----VDFNKALEL 490
|
490 500 510
....*....|....*....|....*....|....*.
gi 24655642 567 QNLLANAQMTIVSAEARKESRGAHAREDFKVREDEY 602
Cdd:PRK06263 491 ENMILVAELVIKSALLRKESRGAHYREDYPETNDEW 526
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
80-455 |
7.13e-129 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 385.87 E-value: 7.13e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 80 EGFRTAVITKLFPTRSHTIAAQGGINAALG--NMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPF 157
Cdd:pfam00890 21 AGLKVAVVEKGQPFGGATAWSSGGIDALGNppQGGIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEALGVPF 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 158 SRTQDGKIYQRAFGGQSLKfgkggqAHRCCAVADR-----TGHSLLHTLYGQSLSYDCNYFVEYFALDLIFEDGECRGVL 232
Cdd:pfam00890 101 SRTEDGHLDLRPLGGLSAT------WRTPHDAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVEDGRVTGAV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 233 ALNLEDGTLHRFRAK-NTVIATGGYGR---------AFFSCTSAHTCTGDGTAMVARQGLPSQD--LEFVQFHPTGIYG- 299
Cdd:pfam00890 175 VENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSLVGi 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 300 ---AGCLItEGCRGEGGYLINGNGERFMeryapvaKDLASRDVVSRSMT-IEIMEGRGAgpekdHVYLQLHH-LPPKQLA 374
Cdd:pfam00890 255 rlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRGA-----NVYLDASGsLDAEGLE 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 375 ERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYRGQVItidkDGKDVIVPGLYAAGEAASSSVHGANRLGANS 454
Cdd:pfam00890 322 ATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVL----DADGQPIPGLYAAGEVACGGVHGANRLGGNS 397
|
.
gi 24655642 455 L 455
Cdd:pfam00890 398 L 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
57-637 |
2.16e-113 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 353.96 E-value: 2.16e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 57 HAYDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNM-EEDDWKWHMYDTVKGSDWLGDQDA 135
Cdd:PRK07803 7 HSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVnPKDNWQVHFRDTMRGGKFLNNWRM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 136 IHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLKfgkggqahRCCAVADRTGHSLLHTL-----------YGQ 204
Cdd:PRK07803 87 AELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHTYP--------RLAHVGDRTGLELIRTLqqkivslqqedHAE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 205 SLSYDCN--YFVEYFALDLIFEDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGL 282
Cdd:PRK07803 159 LGDYEARikVFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 283 PSQDLEFVQFHPTGIYGA----GCLITEGCRGEGGYLINGNGERFMERYAP-VAK------------------------D 333
Cdd:PRK07803 239 TLINMEFVQFHPTGMVWPpsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdVFKgqyaeteeeadrwykdndnnrrppE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 334 LASRDVVSRSMTIEIMEGRGAgpEKDHVYLQL-HHLPPKQLAERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGvpt 412
Cdd:PRK07803 319 LLPRDEVARAINSEVKAGRGS--PHGGVYLDIaSRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGG--- 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 413 nyrgqvITIDKDGKDVIVPGLYAAGEAAsSSVHGANRLGANSLLDLVVFGRACAKTIAELNKPGAPAPTLKENAGEASVA 492
Cdd:PRK07803 394 ------VEVDPDTGAATVPGLFAAGECA-GGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEEAVDAAAR 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 493 N-LDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKvVDRSLIWNSDLVETLELQNLLA 571
Cdd:PRK07803 467 EaLAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVS-VEGHRQYNPGWHLALDLRNMLL 545
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 572 NAQMTIVSAEARKESRGAHAREDFkvredeydfskpldgqqkkP-MDQHWRKHTLswVC---NDNGDITL 637
Cdd:PRK07803 546 VSECVARAALERTESRGGHTRDDH-------------------PgMDPEWRRINL--VCradPVGGHVTV 594
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
78-600 |
7.14e-99 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 315.11 E-value: 7.14e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 78 VAEGFRTAVITKLFPTRSHTIAAQGGINAALGnmEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPF 157
Cdd:PLN02815 48 VAEYGTVAIITKDEPHESNTNYAQGGVSAVLD--PSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASF 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 158 SRTQDGKIYQRAFGGQSlkfgkggqAHRCCAVADRTGHSLLHTLYgQSLSYDCN--YFVEYFALDLIF-EDGE---CRGV 231
Cdd:PLN02815 126 DHGEDGNLHLAREGGHS--------HHRIVHAADMTGREIERALL-EAVKNDPNitFFEHHFAIDLLTsQDGGsivCHGA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 232 LALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC--------- 302
Cdd:PLN02815 197 DVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakare 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 303 ---LITEGCRGEGGYLINGNGERFMERYAPVAkDLASRDVVSRSMTIEIMEGRgagpEKdHVYLQLHHLPPKQLAERLPG 379
Cdd:PLN02815 277 nafLITEAVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPREEILSHFPN 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 380 ISETAMIFaGVDVTREPIPVLPTVHYNMGGVPTNYRGQvitidkdgkdVIVPGLYAAGEAASSSVHGANRLGANSLLDLV 459
Cdd:PLN02815 351 IAAECLKR-GLDITKQPIPVVPAAHYMCGGVRTGLQGE----------TNVQGLYAAGEVACTGLHGANRLASNSLLEAL 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 460 VFG-RACAKTIAELNKP--------GAPAPTLKENAGEASVANLDKlrhangqiTTADLRLKMQKTMQHHAAVFRDGPIL 530
Cdd:PLN02815 420 VFArRAVQPSIDHMARAlrdvsaaaAWARPVAPTALADSVMDEILE--------WTAVVRKELQRIMWNYVGIVRSTERL 491
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 531 QDGVNKMKEIYKQFKDIkVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVRED 600
Cdd:PLN02815 492 ETAERKLEELEAEWEAI-LFRHGWKPTMVGLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
86-599 |
9.23e-99 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 311.92 E-value: 9.23e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 86 VITKLFPTRSHTIAAQGGINAALGnmEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKi 165
Cdd:PRK08071 30 IITKKTKRNSNSHLAQGGIAAAVA--TYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGP- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 166 yqrafggqsLKFGKGGqAHR----CCAVADRTGHSLLHTLYGQSLSYdcNYFVEY-FALDLIFEDGECRGVLALNlEDGT 240
Cdd:PRK08071 107 ---------LHLGKEG-AHRkrriLHAGGDATGKNLLEHLLQELVPH--VTVVEQeMVIDLIIENGRCIGVLTKD-SEGK 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 241 LHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAG-C--LITEGCRGEGGYLIN 317
Cdd:PRK08071 174 LKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGrCvgLVSEAVRGEGAVLIN 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 318 GNGERFMERYAPVaKDLASRDVVSRSMTIEIMEGrgagpekDHVYLQLHHLPpkQLAERLPGISETAMIfAGVDVTREPI 397
Cdd:PRK08071 254 EDGRRFMMGIHPL-ADLAPRDVVARAIHEELLSG-------EKVYLNISSIQ--NFEERFPTISALCEK-NGVDIETKRI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 398 PVLPTVHYNMGGVPTNyrgqvitidKDGKDVIvPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIaeLNKPgA 477
Cdd:PRK08071 323 PVVPGAHFLMGGVKTN---------LDGETSI-PGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHI--LTKA-T 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 478 PAPTLKENAGEASvanldklrhangQITTADLRLK--MQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSli 555
Cdd:PRK08071 390 KPRLNPFAEKEKK------------FIVLNHLPTKeeIQEKMMKYVGIVRTEQSLSEAKRWLEKYGVRNMILDHDALT-- 455
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 24655642 556 wnsdlVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVRE 599
Cdd:PRK08071 456 -----NEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHRN 494
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
79-595 |
5.30e-98 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 309.42 E-value: 5.30e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 79 AEGFRTAVITKLFPTRSHTIAAQGGINAALgnMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFS 158
Cdd:TIGR00551 22 AEKGRVSVITKASVTDSNSYYAQGGIAAAL--AETDSIDAHVEDTLAAGAGICDEEAVWFVVSDGSEAVQFLVSHGVTFD 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 159 RTQDGKIYQRAFGGQSLKfgkggqahRCCAVADRTGHSLLHTLYGQSLSY-DCNYFVEYFALDLIFEDGECRGVLALNle 237
Cdd:TIGR00551 100 RNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEKHARSEpNVNIIEGEFALDLLIETGRCAGVFVQG-- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 238 DGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC---LITEGCRGEGGY 314
Cdd:TIGR00551 170 SGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfLITEAVRGEGAK 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 315 LINGNGERFMERYAPVAkDLASRDVVSRSMTIEIMEGrgagpEKDHVYLQLHHLPPkqLAERLPGISETaMIFAGVDVTR 394
Cdd:TIGR00551 250 LVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN--FKDRFPTIYAV-CRGAGIDPER 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 395 EPIPVLPTVHYNMGGVPTNYRGQVItidkdgkdviVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAeLNK 474
Cdd:TIGR00551 321 EPIPVAPGAHYTMGGISVDAFGRTT----------IPGLYAIGETACTGLHGANRLASNSLLECLVFGLRAARTIS-REP 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 475 PGAPAPTLKENAGEASVANLDKLrhangqittADLRLKMQK---TMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIkvvd 551
Cdd:TIGR00551 390 PYASREYQSGVWDEPRSENPLDR---------HELQHKMSSlrsVLWNHAGIVRLEWSLREALRKLVEIQDEVDER---- 456
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 24655642 552 rsliwnsdlvetLELQNLLANAQMTIVSAEARKESRGAHAREDF 595
Cdd:TIGR00551 457 ------------MELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
58-631 |
2.77e-94 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 301.58 E-value: 2.77e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 58 AYDAIVVGAGGAGLRAAFGLVAEgFRTAVITKLFPTRSHTIAAQGGINAALGnmEEDDWKWHMYDTVKGSDWLGDQDAIH 137
Cdd:PRK07395 9 QFDVLVVGSGAAGLYAALCLPSH-LRVGLITKDTLKTSASDWAQGGIAAAIA--PDDSPKLHYEDTLKAGAGLCDPEAVR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 138 YMTREAPKAVIELENYGMPFSRTQDgkiyQRAFggqSLKfgkggQAHRCCAV---ADRTGHSLLHTLYGQSLSY-DCNYF 213
Cdd:PRK07395 86 FLVEQAPEAIASLVEMGVAFDRHGQ----HLAL---TLE-----AAHSRPRVlhaADTTGRAIVTTLTEQVLQRpNIEII 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 214 VEYFALDLIF--EDGECRGVLALnlEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQ 291
Cdd:PRK07395 154 SQALALSLWLepETGRCQGISLL--YQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQ 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 292 FHPTGIYGAGC---LITEGCRGEGGYLINGNGERFMERYAPvAKDLASRDVVSRSMtIEIMEGRGAGPEKDHVYLQLHHL 368
Cdd:PRK07395 232 FHPTALTKPGAprfLISEAVRGEGAHLVDAQGRRFAFDYHP-AGELAPRDVVSRAI-FSHLQKTATDPATAHVWLDLRPI 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 369 PPKQLAERLPGISETAMIFaGVDVTREPIPVLPTVHYNMGGVPTNYRGQViTIdkdgkdvivPGLYAAGEAASSSVHGAN 448
Cdd:PRK07395 310 PAERIRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVTDLNNQT-SI---------PGLYAVGETASTGVHGAN 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 449 RLGANSLLDLVVFGRACAK---TIAELNKPGAPAPTLKENAGEASVaNLDKLRHangqittadLRLKMQKTMQHHAAVFR 525
Cdd:PRK07395 379 RLASNSLLECLVFAAQLAQlelPIEPPASPDLPPISFIIDASQWKN-EQEQIQR---------IRQELPELVWQSAGICR 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 526 DGPILQDGVNKMKEIYKQFKDIKVV--------DRSLIWNSDLVET-----LELQNLLANAQMTIVSAEARKESRGAHAR 592
Cdd:PRK07395 449 EADTLERAIAQVEQWQQQLAALPLSqflanlppGQTVSFNGPDAEQqlrlwAETRNLLDIAYLILKSALFRTESRGGHYR 528
|
570 580 590
....*....|....*....|....*....|....*....
gi 24655642 593 EdfkvredeyDFSKPldgqqkkpmDQHWRKHTLswVCND 631
Cdd:PRK07395 529 L---------DYPQT---------DPAWQVHTL--VQGE 547
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
100-595 |
2.00e-92 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 295.67 E-value: 2.00e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 100 AQGGINAALGnmEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIyqrAFGGQSlkfgk 179
Cdd:PRK07512 50 AQGGIAAALG--PDDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRL---ALGLEA----- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 180 ggqAH---RCCAVA-DRTGHSLLHTLYGQSLSYDCNYFVE-YFALDLIFEDGECRGVLALNleDGTLHRFRAKNTVIATG 254
Cdd:PRK07512 120 ---AHsrrRIVHVGgDGAGAAIMRALIAAVRATPSITVLEgAEARRLLVDDGAVAGVLAAT--AGGPVVLPARAVVLATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 255 GYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGaGC----LITEGCRGEGGYLINGNGERFMERYAPv 330
Cdd:PRK07512 195 GIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDI-GRdpapLATEALRGEGAILINEDGERFMADIHP- 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 331 AKDLASRDVVSRSMTIEIMEGRGagpekdhVYLQLHHLPPKQLAERLPGISEtAMIFAGVDVTREPIPVLPTVHYNMGGV 410
Cdd:PRK07512 273 GAELAPRDVVARAVFAEIAAGRG-------AFLDARAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 411 PTnyrgqvitiDKDGKDVIvPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAELNkPGAPAPTLKENAGEAS 490
Cdd:PRK07512 345 AV---------DADGRSSL-PGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTP-AAAAAPLSAAAAPALD 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 491 VANLDKLRhangqittadlrlkmqKTMQHHAAVFRDGPILQDGVNkmkeiykqfkdikvvdrsliwnsdLVETLE----- 565
Cdd:PRK07512 414 PADLALLR----------------PIMSRHVGVLRDADGLRRAIA------------------------ALLPLEagagp 453
|
490 500 510
....*....|....*....|....*....|
gi 24655642 566 LQNLLANAQMTIVSAEARKESRGAHAREDF 595
Cdd:PRK07512 454 AADPATVALLIAVAALAREESRGAHFRTDF 483
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
94-661 |
5.79e-92 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 296.50 E-value: 5.79e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 94 RSHTIAAQGGINAALGNMEEDDWKW-HMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGG 172
Cdd:PRK08641 39 RSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLDRMGVMFNRTPEGLLDFRRFGG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 173 QslkfgkggQAHRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFA----LDLIF-EDGECRGVLALNLEDGTLHRFRAK 247
Cdd:PRK08641 119 T--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEgwefLGAVLdDEGVCRGIVAQDLFTMEIESFPAD 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 248 NTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC--LITEGCRGEGGYL-INGNGER-- 322
Cdd:PRK08641 191 AVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLMSESARGEGGRVwTYKDGKPwy 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 323 FMERYAPVAKDLASRDVVSRsmtiEIM-----EGRGAGPEkDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPI 397
Cdd:PRK08641 271 FLEEKYPAYGNLVPRDIATR----EIFdvcveQKLGINGE-NMVYLDLSHKDPKELDIKLGGILEIYEKFTGDDPRKVPM 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 398 PVLPTVHYNMGGVPTNYRgQVITIdkdgkdvivPGLYAAGEaASSSVHGANRLGANSLLDLV----VFGRACAKTIAELN 473
Cdd:PRK08641 346 KIFPAVHYSMGGLWVDYD-QMTNI---------PGLFAAGE-CDYSYHGANRLGANSLLSAIyggmVAGPNAVEYIKGLG 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 474 KPGAPAP-TLKENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDR 552
Cdd:PRK08641 415 KSADDVSsSVFEQALKQEQEKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRENDKLLETDEKIQELMERYKRISVNDT 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 553 SLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEydfskpldgqqkkpmdqHWRKHTLSWVCNDN 632
Cdd:PRK08641 495 SRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERNDE-----------------NWLKTTMATYTPEG 557
|
570 580
....*....|....*....|....*....
gi 24655642 633 GDITLDYRNViDTTLdnevstVPPAIRSY 661
Cdd:PRK08641 558 EEPEFSYEDV-DTSL------IPPRKRDY 579
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
92-661 |
1.26e-91 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 296.38 E-value: 1.26e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 92 PTRSHTIAAQGGINAALGNMEEDDWKW-HMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAF 170
Cdd:TIGR01811 33 PRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEIIDLMDAMGVPFAREYGGLLDTRSF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 171 GGQslkfgkggQAHRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFA----LDLIFEDGE-CRGVLALNLEDGTLHRFR 245
Cdd:TIGR01811 113 GGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIVVDGNrARGIIARNLVTGEIETHS 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 246 AKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC------LITEGCRGEG------- 312
Cdd:TIGR01811 185 ADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGTwqsklrLMSESLRNDGriwtpke 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 313 ---GYLING--NGER--FMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKDHVYLQLHH----LPPKQLAERLPGIS 381
Cdd:TIGR01811 265 kndNRDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVYLDFSDaderLGRKEIDAKYGNLF 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 382 ETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYRgQVITIdkdgkdvivPGLYAAGEaASSSVHGANRLGANSLLDLVVF 461
Cdd:TIGR01811 345 EMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDYD-QMTNI---------PGLFAAGE-CDFSQHGANRLGANSLLSAIAD 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 462 GR-ACAKTIAELNKPGAPAPTLKENAGEASVA------NLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGV 534
Cdd:TIGR01811 414 GYfALPFTIPNYLGPELSSEDMPEDAPEFQAAlaeeqeRFDRLLKMRGDENPYYLHRELGEIMTENCGVSRNNEKLLKTD 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 535 NKMKEIYKQF-KDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEYDFSkpldgqqk 613
Cdd:TIGR01811 494 EKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPEFPTPDGEAERN-------- 565
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 24655642 614 kpmDQHWRKHTLSWVCNDNGDITLDYRNVidttldnEVSTVPPAIRSY 661
Cdd:TIGR01811 566 ---DEEFLKVTAWEFQGENDAPEFHYEEL-------DFELVPPRKRDY 603
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
78-595 |
4.76e-86 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 279.49 E-value: 4.76e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 78 VAEGFRTAVITKLFPTRSHTIAAQGGINAALGnmEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPF 157
Cdd:PRK09077 27 LAEHRRVAVLSKGPLSEGSTFYAQGGIAAVLD--ETDSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 158 SRTQDgkiyqrAFGGQSLKFGK-GGQAHR-CCAVADRTGHSLLHTLYGQSLSY-DCNYFVEYFALDLIFED------GEC 228
Cdd:PRK09077 105 TTDEQ------ANGEEGYHLTReGGHSHRrILHAADATGKAVQTTLVERARNHpNITVLERHNAIDLITSDklglpgRRV 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 229 RGVLALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC---LIT 305
Cdd:PRK09077 179 VGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYHPQArsfLIT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 306 EGCRGEGGYLINGNGERFMERYAPVAkDLASRDVVSRSMTIEiMEGRGAgpekDHVYLQLHHLPPKQLAERLPGISETAM 385
Cdd:PRK09077 259 EALRGEGAYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHE-MKRLGA----DCVYLDISHKPADFIRQHFPTIYERCL 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 386 IFaGVDVTREPIPVLPTVHYNMGGVPTNYRGQVitiDkdgkdviVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRAC 465
Cdd:PRK09077 333 EL-GIDITKEPIPVVPAAHYTCGGVMVDLHGRT---D-------LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 466 AKTIAELNKPGAPAPTLK-------ENAGEASVA--NLDKLRHAN----GqITTADLRLkmqKTMQHHAAvfrdgpILQD 532
Cdd:PRK09077 402 AEDILSRLPKAPMPPTLPawdesrvTDSDEEVVIqhNWHELRLFMwdyvG-IVRTTKRL---ERALHRIR------LLQQ 471
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24655642 533 GVNkmkEIYKQFKdikvVDRSLiwnsdlvetLELQNLLANAQMTIVSAEARKESRGAHAREDF 595
Cdd:PRK09077 472 EID---EYYANFR----VSNNL---------LELRNLVQVAELIVRCAMERKESRGLHYTLDY 518
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
79-602 |
1.24e-78 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 260.29 E-value: 1.24e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 79 AEGFRTAVITKLFPTRSHTIAAQGGINAALGNmeEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFS 158
Cdd:PRK07804 37 RAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVALGARFD 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 159 RTQDGKIYQRAFGGQSlkfgkggqAHRCC-AVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIF-EDGECRGVLALNL 236
Cdd:PRK07804 115 ESPDGRWALTREGGHS--------RRRIVhAGGDATGAEVQRALDAAVRADPLDIREHALALDLLTdGTGAVAGVTLHVL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 237 EDGTLHRF---RAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIY-GAGC-----LITEG 307
Cdd:PRK07804 187 GEGSPDGVgavHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLFlGPAAggqrpLISEA 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 308 CRGEGGYLINGNGERFMERYAPVAkDLASRDVVSRSMTiEIMEGRGAgpekDHVYLQLHHLPpkQLAERLPGISEtAMIF 387
Cdd:PRK07804 267 VRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAID-RRMKATGD----DHVYLDARGIE--GFARRFPTITA-SCRA 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 388 AGVDVTREPIPVLPTVHYNMGGVPTNYRGQVItidkdgkdviVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAK 467
Cdd:PRK07804 338 AGIDPVRQPIPVAPAAHYSCGGVVTDVYGRTS----------VPGLYAAGEVACTGVHGANRLASNSLLEGLVVGERAGA 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 468 TIAelnkpgapaptlkENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGpilqDGVNKMKEIYKQFKDI 547
Cdd:PRK07804 408 AAA-------------AHAAAAGRPRATPAVGPEPGLLPALDRAELQRAMTRGAGVLRSA----AGLARAADRLAAGAPA 470
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 24655642 548 KVVDRsliwnsdlVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEY 602
Cdd:PRK07804 471 RVVPG--------RADWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDDEW 517
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
80-469 |
2.06e-67 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 227.26 E-value: 2.06e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 80 EGFRTAVITKLFPTRSHTIAAQGGINAALGnmeEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSR 159
Cdd:PRK06175 25 KDLKILMVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDK 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 160 TQDGKIYQRAfGGQSLkfgkggqaHRCCAVADRTGHSLLHTLYGQSLSYDCNYFVE--YFaLDLIFEDGECRGvlALNLE 237
Cdd:PRK06175 102 DEKELSYTKE-GAHSV--------NRIVHFKDNTGKKVEKILLKKVKKRKNITIIEncYL-VDIIENDNTCIG--AICLK 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 238 DGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC-----LITEGCRGEG 312
Cdd:PRK06175 170 DNKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkkfLISESVRGEG 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 313 GYLINGNGERFMeryapvaKDLASRDVVSRSMTIEImegrgagpEKD---HVYLQLHHLPPKQLAERLPGISETAMIfAG 389
Cdd:PRK06175 250 GKLLNSKGERFV-------DELLPRDVVTKAILEEM--------KKTgsnYVYLDITFLDKDFLKNRFPTIYEECLK-RG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 390 VDVTREPIPVLPTVHYNMGGvptnyrgqvITIDKDGKDVIvPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTI 469
Cdd:PRK06175 314 IDITKDAIPVSPAQHYFMGG---------IKVDLNSKTSM-KNLYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKI 383
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
510-661 |
5.70e-62 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 201.90 E-value: 5.70e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 510 RLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGA 589
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24655642 590 HAREDFKVREDEydfskpldgqqkkpmdqHWRKHTLSWVCNDNGDITLDYRNVIDTTLdnevstVPPAIRSY 661
Cdd:pfam02910 81 HAREDYPERDDE-----------------NWLKHTLAYYDGDDGGPRLEYEPVTFTTL------FPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
77-611 |
2.66e-61 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 211.58 E-value: 2.66e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 77 LVAEGFRTAVITKLfPTRSHTIAAQGGInaALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMP 156
Cdd:PRK08401 20 LAKKGFDVTIIGPG-IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 157 FSRTQdgkiyqrAFGGQSLkfgkggqaHRCCAVADRTGHSLLHTLYGQSLSYDCNyFVEYFALDLIFEDGECRGVLAlnl 236
Cdd:PRK08401 97 FEGNE-------LEGGHSF--------PRVFTIKNETGKHIIKILYKHARELGVN-FIRGFAEELAIKNGKAYGVFL--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 237 eDGTLHRFRAknTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC--LITEGCRGEGGY 314
Cdd:PRK08401 158 -DGELLKFDA--TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKRGtyLISEAVRGAGAK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 315 LINGNGERFMeryapvaKDLASRDVVSRSMTIEIMEGRGagpekdhVYLQLHHLppKQLAERLPGISeTAMIFAGVDVTR 394
Cdd:PRK08401 235 LVTGDGERFV-------NELETRDIVARAIYRKMQEGKG-------VFLDATGI--EDFKRRFPQIY-AFLRKEGIDPSR 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 395 EPIPVLPTVHYNMGG--VPTNYRGQVitidkdgkdvivPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAEL 472
Cdd:PRK08401 298 DLIPVTPIAHYTIGGisVDTFYRTGI------------KNLYAIGEAASNGFHGANRLASNSLLECIVSGLEVARTISRE 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 473 NKPGAPAPTLKENAGEAsvANLDKLRhangqittadlrlkmqKTMQHHAAVFRDGPILQDGVNKMKEIYkqfkdikvVDR 552
Cdd:PRK08401 366 RPKLREVKEPPYHGYEL--GDVDSIR----------------EILWNHAGIVRSEESLREGLKKLEGIE--------ADP 419
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 24655642 553 SLiwnsdlvetlelqNLLANAqmTIVSAEARKESRGAHAREDFKVREDEYDFSKPLDGQ 611
Cdd:PRK08401 420 RL-------------KLLAKG--VLECALAREESRGAHYREDFPFMRKEFERPSFFDGR 463
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
92-601 |
4.72e-53 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 193.11 E-value: 4.72e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 92 PTRSHTIAAQGGINAALGNMEEDDWKW-HMYDTVKGSDwlgdqdaihYMTREA--------PKAVIELEN-YGMPFSRTQ 161
Cdd:PRK07573 70 PRRAHSIAAQGGINAAKNYQNDGDSVYrLFYDTVKGGD---------FRAREAnvyrlaevSVNIIDQCVaQGVPFAREY 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 162 DGKIYQRAFGG-Q-SLKFGKGGQahrccavadrTGHSLLHTLYgQSLSYDCNY-FVEYFA----LDLIFEDGECRGVLAL 234
Cdd:PRK07573 141 GGLLANRSFGGaQvSRTFYARGQ----------TGQQLLLGAY-QALSRQIAAgTVKMYTrtemLDLVVVDGRARGIVAR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 235 NLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGL----PSqdleFVQFHPTGIYGAG------CLI 304
Cdd:PRK07573 210 NLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGSNATAIWRAHKKGAyfanPC----FTQIHPTCIPVSGdyqsklTLM 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 305 TEGCRGEG--------GYLINGNG----ER--FMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKDHVYLQL----H 366
Cdd:PRK07573 286 SESLRNDGriwvpkkkGDKRKPNDipeeERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPTGLGVYLDFadaiK 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 367 HLPPKQLAERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYRGQViTIdkdgkdvivPGLYAAGEaASSSVHG 446
Cdd:PRK07573 366 RLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLMS-TI---------PGLFVIGE-ANFSDHG 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 447 ANRLGANSLLdlvvfgRACAK-------TI----AELNKPGAPAPTLKE--NAGEASVANLDKLRHANGQITTADLRLKM 513
Cdd:PRK07573 435 ANRLGASALM------QGLADgyfvlpyTIgnylADTIGTPKVSTDHPEfkEAEAEVQDRIDRLLNIKGKRTVDSFHREL 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 514 QKTMQHHAAVFRDGPILQDGVNKMKEIYKQF-KDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAR 592
Cdd:PRK07573 509 GKIMWDYCGMARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQELEKAGRVADFLELGELMCRDALHREESCGGHFR 588
|
....*....
gi 24655642 593 EDFKVREDE 601
Cdd:PRK07573 589 EEHQTEDGE 597
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
97-463 |
2.83e-38 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 147.49 E-value: 2.83e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 97 TIAAQGGINAALGNME-----EDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAViELENYGMPFSRTQDGKiyqraFG 171
Cdd:TIGR01813 39 SAIAAGGMNAAGTDQQkalgiEDSPELFIKDTLKGGRGINDPELVRILAEESKDAV-DWLQDGVGARLDDLIQ-----LG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 172 GQSLKfgkggQAHRCCAVAdRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIF-EDGECRGVLALNlEDGTLHRFRAKNTV 250
Cdd:TIGR01813 113 GHSVP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQdDQGSVVGVVVKG-KGKGIYIKAAKAVV 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 251 IATGGYGRAF------------FSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTG-IYGAGCLITEGCRGEGGYLIN 317
Cdd:TIGR01813 186 LATGGFGSNKemiakydptlkhLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVN 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 318 GNGERFMEryapvakDLASRDVVSRsmtiEIMEGRGAGP-----EKDHV-------YLQLHHLPPK----QLAERLpGIS 381
Cdd:TIGR01813 266 KTGERFMN-------ELATRDKVSD----AILAQPGKDAylifdDDVYKkakmvdnYYRLGVAYKGdsleELAKQF-GIP 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 382 ETA----------------------MIFAGVDVTREP---IPVLPTVHYNMGGVPTNYRGQVitIDKDGKdvIVPGLYAA 436
Cdd:TIGR01813 334 AAAlkqtikdyngyvasgkdtpfgrPMDMPTDLSKAPyyaIKVTPGVHHTMGGVKINTKAEV--LDANGK--PIPGLFAA 409
|
410 420
....*....|....*....|....*..
gi 24655642 437 GEaASSSVHGANRLGANSLLDLVVFGR 463
Cdd:TIGR01813 410 GE-VTGGVHGANRLGGNAIADCIVFGR 435
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
33-474 |
6.44e-33 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 133.04 E-value: 6.44e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 33 ITHGRQQASAANPDKISKQYpvvdhayDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNME 112
Cdd:PRK06481 43 VTSGASKTSYTDPSELKDKY-------DIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQ 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 113 E----DDWKWHMYD-TVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQdgkiyqrAFGGQSLKfgkggQAHRCc 187
Cdd:PRK06481 116 KaqgiADSNDKFYEeTLKGGGGTNDKALLRYFVDNSASAIDWLDSMGIKLDNLT-------ITGGMSEK-----RTHRP- 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 188 AVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIFEDGECRGVlALNLEDGTLHRFRAKNTVIATGGYGR--------- 258
Cdd:PRK06481 183 HDGSAVGGYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVTGV-KVKINGKETKTISSKAVVVTTGGFGAnkdmiakyr 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 259 ---AFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINGNGERFM----------- 324
Cdd:PRK06481 262 pdlKGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsa 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 325 ------ERYAPVAKDLASRDvvsRSMTIEIMEGRGAGPEKDHV--YLQLHHLPPKQLAERLPGISE-------------T 383
Cdd:PRK06481 342 ainklpEKYAYVVFDSGVKD---RVKAIAQYEEKGFVEEGKTIdeLAKKINVPAETLTKTLDTWNKavknkkdeafgrtT 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 384 AMifaGVDVTREP---IPVLPTVHYNMGGVPTNYRGQVitIDKDGKDviVPGLYAAGEAAsSSVHGANRLGANSLLDLVV 460
Cdd:PRK06481 419 GM---DNDLSTGPyyaIKIAPGIHYTMGGVKINTNTEV--LKKDGSP--ITGLYAAGEVT-GGLHGENRIGGNSVADIII 490
|
490
....*....|....
gi 24655642 461 FGRACAKTIAELNK 474
Cdd:PRK06481 491 FGRQAGTQSAEFAK 504
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
221-617 |
1.13e-16 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 83.56 E-value: 1.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 221 LIFEDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRA-------FFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFH 293
Cdd:PRK08275 164 LTDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRLglpasgyLFGTYENPTNAGDGYAMAYHAGAELANLECFQIN 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 294 P--TGIYGAGCLITEGcrGEGGYLINGNGERFMERYAPvakdlasrdvvSRSMTIEIME--GRGAGPekdhVYLQLHHLP 369
Cdd:PRK08275 244 PliKDYNGPACAYVTG--PLGGYTANAKGERFIECDYW-----------SGQMMWEFYQelQSGNGP----VFLKLDHLA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 370 PKQlaerlpgISETAMIFAGVDvtRepiPVLPTVHYNMGgvpTNYRGQVIT------------------IDKDGKdVIVP 431
Cdd:PRK08275 307 EET-------IQTIETILHTNE--R---PSRGRFHEGRG---TDYRQQMVEmhiseigfcsghsasgvwVNEKAE-TTVP 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 432 GLYAAGEAASssvhganrLGANSLLDLVVFGRACAKTIAELNKpGAPAPTLKENAGEASVAN-LDKLRHANGqITTADLR 510
Cdd:PRK08275 371 GLYAAGDMAS--------VPHNYMLGAFTYGWFAGENAAEYVA-GRDLPEVDAAQVEAERARvLAPLHREDG-LPPAQVE 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 511 LKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDrsliWNsDLVETLELQNLLANAQMTIVSAEARKESRGA- 589
Cdd:PRK08275 441 YKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARD----PH-ELMRALEVSSIRDCAEMAARASLFRTESRWGl 515
|
410 420 430
....*....|....*....|....*....|....*..
gi 24655642 590 -HAREDFKVREDEYDFS-----KPLDGQ---QKKPMD 617
Cdd:PRK08275 516 yHYRVDFPERNDAEWFChthlrKDEDGRmvsFKRPVE 552
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
238-463 |
1.18e-16 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 84.45 E-value: 1.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 238 DGTLHRFRAKNTVIATGGYGR---------------AFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYG--- 299
Cdd:PTZ00306 601 SGQVMDLLADAVILATGGFSNdhtpnsllreyapqlSGFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkd 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 300 ----AGCLITEGCRGEGGYLINGNGERFMeryapvaKDLASRDVVSRSMTIEIMEGRGAGPEKdHVYLQLHHLPPK---- 371
Cdd:PTZ00306 681 psnrTKYLGPEALRGSGGVLLNKNGERFV-------NELDLRSVVSQAIIAQGNEYPGSGGSK-FAYCVLNEAAAKlfgk 752
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 372 ----------QLAERLPGISETAM--------------------------------IFAGVDVTREPIPV---LPTVHYN 406
Cdd:PTZ00306 753 nslgfywkrlGLFQRVDDVKGLAKligcpvenlhrtletyerlstkkvacpltgkvVFPCVVGTQGPYYVafvTPSIHYT 832
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24655642 407 MGGVPTNYRGQVITIDKDGK--DVIVP--GLYAAGEAaSSSVHGANRLGANSLLDLVVFGR 463
Cdd:PTZ00306 833 MGGCLISPSAEMQMEDNSVNifEDRRPilGLFGAGEV-TGGVHGGNRLGGNSLLECVVFGK 892
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
134-601 |
1.86e-13 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 73.42 E-value: 1.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 134 DAIHYMTREAPKAVIELENYGMPFSRTQDGKiYQRAfG-------GQSLKfgkggqahrcCAVADRTGHSLlhtlygqsl 206
Cdd:PRK06854 88 DLVYDIARHVDSVVHLFEEWGLPIWKDENGK-YVRR-GrwqiminGESYK----------PIVAEAAKKAL--------- 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 207 syDCNYFVEYFALDLIFEDGECRGVLALNLEDGTLHRFRAKNTVIATGG----Y---------GRAFFSCTSahtcTGDG 273
Cdd:PRK06854 147 --GDNVLNRVFITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiYrprspgegrGRMWYPPFN----TGSG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 274 TAMVARQG--LPSQDLEFVQFH------PTGIYGAGClitegcrgeGGYLINGNGERFMERYAPVAKDLASRDVVSR--- 342
Cdd:PRK06854 221 YAMGIRAGaeMTTFENRFIPLRfkdgygPVGAWFLLF---------KAKAVNALGEEYEAKNAAELKKYVPYADYKPipt 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 343 -----SMTIEIMEGRgaGPekdhVYLQLHH-LPPKQLAERL--------PGIsetAMIFAGVDV--TREPIPVLPTVHYN 406
Cdd:PRK06854 292 clrnyATVEENKAGR--GP----IYMDTEEaLQDKHLESELwedfldmtPGQ---ALLWAAQNIepEEENSEIMGTEPYI 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 407 MGG----------------VPTNYRG--QVITIDkdgkdvivpGLYAAGEAA-------SSSVHGANRLGANS----LLD 457
Cdd:PRK06854 363 VGShsgasgywvsgpedwvPEEYKWGynRMTTVE---------GLFAAGDVVggsphkfSSGSFAEGRIAAKAavryILD 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 458 LVVFGRACAKTIAE--LNKPGAPAPTLKENAGEASVANLDklrhaNGQITTADLRLKMQKTMQHHAA----VFR-DGPIL 530
Cdd:PRK06854 434 NKDEKPEIDDDQIEelKKEIYAPLERYEEFKDYSTDPDVN-----PNYISPEQLEERLQKIMDEYAGgistNYTtNEKLL 508
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24655642 531 QDGVNKMKEIYKQFKDIKVVDrsliwNSDLVETLELQNLLANAQMTIVSAEARKESR--GAHAREDFKVREDE 601
Cdd:PRK06854 509 EIALELLEMLEEDSEKLAARD-----LHELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDDE 576
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
224-484 |
1.30e-06 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 51.77 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 224 EDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRA-------FFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHP-- 294
Cdd:PRK13800 172 EGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLglpasgyLYGTYENPTNAGDGYSMAYHAGAELSGIECFQINPli 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 295 TGIYGAGCLITegCRGEGGYLINGNGERFmeryapVAKDLASRDVVSRsMTIEIMEGRGAgpekdhVYLQLHHLPpkqla 374
Cdd:PRK13800 252 KDYNGPACAYV--ANPFGGYQVNAQGERF------VDSDYWSGQMMAE-VKREIESARGP------IYLKVSHLP----- 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 375 erlpgiSETAMIFAGVDVTREPiPVLPTVHYNMG---------------GVPTNYRGQVITIDKDGKdVIVPGLYAAGEA 439
Cdd:PRK13800 312 ------EETLSALESILHTTER-PTRGTFHANRGhdyrthdiemhiseiGLCSGHSASGVWVDEHAR-TTVPGLYAAGDL 383
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 24655642 440 AssSVHGANRLGANSLLDLVvfGRACAKTIAELNKPGA-PAPTLKE 484
Cdd:PRK13800 384 A--CVPHNYMIGAFVFGDLA--GAHAAGTLAEVPAPGElPADQLAE 425
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
408-481 |
5.67e-04 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 42.82 E-value: 5.67e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24655642 408 GGVPTNYRGQVItiDKDGKdvIVPGLYAAGEaASSSVHGANRLGAN-SLLDLVVFGRACAKTIAELNKpGAPAPT 481
Cdd:PRK12844 489 GGLLTDEHARVL--REDGS--VIPGLYATGN-CTASVMGRTYPGAGaSIGNSFVFGYIAALHAAGARS-ADPPPT 557
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
407-450 |
8.77e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 42.19 E-value: 8.77e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 24655642 407 MGGVPTNYRGQVItiDKDGKdvIVPGLYAAGEAA---SSSVHGANRL 450
Cdd:PRK12834 485 LGGLETDLDSRVL--GADGT--PLPGLYAAGEAAgfgGGGVHGYNAL 527
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
407-471 |
2.82e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 40.93 E-value: 2.82e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24655642 407 MGGVPTNYRGQVItiDKDGkdVIVPGLYAAGEAA---SSSVHGANRL-GanSLLDLVVF-GRACAKTIAE 471
Cdd:COG3573 486 LGGLQTDLDSRVL--DADG--QPIPGLYAAGEAAgfgGGGVHGYRALeG--TFLGGCIFsGRAAGRAIAA 549
|
|
| |
