|
Name |
Accession |
Description |
Interval |
E-value |
| LC_FACS_euk1 |
cd17639 |
Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins; The ... |
129-701 |
0e+00 |
|
Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins; The members of this family are eukaryotic fatty acid CoA synthetases (EC 6.2.1.3) that activate fatty acids with chain lengths of 12 to 20 and includes fungal proteins. They act on a wide range of long-chain saturated and unsaturated fatty acids, but the enzymes from different tissues show some variation in specificity. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Organisms tend to have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. In Schizosaccharomyces pombe, lcf1 gene encodes a new fatty acyl-CoA synthetase that preferentially recognizes myristic acid as a substrate.
Pssm-ID: 341294 [Multi-domain] Cd Length: 507 Bit Score: 782.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 129 GDYKWKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCitetevtt 208
Cdd:cd17639 1 GEYKYMSYAEVWERVLNFGRGLVELGLKPGDKVAIFAETRAEWLITALGCWSQNIPIVTVYATLGEDALIHS-------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 209 vitshdllpkfktlldkcplvktiiyiedqLQKTETTGfkegvkilpfnqvVKTGqdskfehvpPKGDDIAIIMYTSGST 288
Cdd:cd17639 73 ------------------------------LNETECSA-------------IFTD---------GKPDDLACIMYTSGST 100
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 289 GTPKGVLLSHKNCIATMKGFVDMVP--IYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPLTLIDtssKIKRGCKG 366
Cdd:cd17639 101 GNPKGVMLTHGNLVAGIAGLGDRVPelLGPDDRYLAYLPLAHIFELAAENVCLYRGGTIGYGSPRTLTD---KSKRGCKG 177
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 367 DATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFLYQYKVKWVQRGYKTPLIDKLVFKKVAKLMGGKVRIIMS 446
Cdd:cd17639 178 DLTEFKPTLMVGVPAIWDTIRKGVLAKLNPMGGLKRTLFWTAYQSKLKALKEGPGTPLLDELVFKKVRAALGGRLRYMLS 257
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 447 GGAPLSADTHEQIKTCLClELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYrVTNKPYPQGEVLI 526
Cdd:cd17639 258 GGAPLSADTQEFLNIVLC-PVIQGYGLTETCAGGTVQDPGDLETGRVGPPLPCCEIKLVDWEEGGY-STDKPPPRGEILI 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 527 GGECVSQGYYKLPGKTNEDFfeeDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENIC 606
Cdd:cd17639 336 RGPNVFKGYYKNPEKTKEAF---DGDGWFHTGDIGEFHPDGTLKIIDRKKDLVKLQNGEYIALEKLESIYRSNPLVNNIC 412
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 607 VYGDPTKQYTVALVVPNQNHLEELAQKHGLGDKSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITLCKEVWSPD 686
Cdd:cd17639 413 VYADPDKSYPVAIVVPNEKHLTKLAEKHGVINSEWEELCEDKKLQKAVLKSLAETARAAGLEKFEIPQGVVLLDEEWTPE 492
|
570
....*....|....*
gi 24586634 687 MGLVTAAFKLKRKDI 701
Cdd:cd17639 493 NGLVTAAQKLKRKEI 507
|
|
| PLN02387 |
PLN02387 |
long-chain-fatty-acid-CoA ligase family protein |
82-714 |
0e+00 |
|
long-chain-fatty-acid-CoA ligase family protein
Pssm-ID: 215217 [Multi-domain] Cd Length: 696 Bit Score: 699.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 82 ENIDTLEKVFNYVAKTYTSKRCLGTRQILSEEDEVQQNGRVFKKYNLGDYKWKTFTEAERTAANFGRGLRELGQKPRENI 161
Cdd:PLN02387 55 EGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 162 VIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPKFKTLLDKCPLVKTIIYIEDQLQK 241
Cdd:PLN02387 135 AIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVD 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 242 TETTGFK-EGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVP-IYPDDV 319
Cdd:PLN02387 215 SDSSLSGsSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPkLGKNDV 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 320 LIGFLPLAHVFELVAESVCLMTGVPIGYSTPLTLIDTSSKIKRGCKGDATVLKPTCMTSVPLILDRISKGINDKVNSGSA 399
Cdd:PLN02387 295 YLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGG 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 400 FKKSLFKFLYQYKVKWVQ------RGYKTPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGL 473
Cdd:PLN02387 375 LAKKLFDIAYKRRLAAIEgswfgaWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGL 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 474 TETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDF-FEEDGQ 552
Cdd:PLN02387 455 TETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYkVDERGM 534
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 553 RWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYTVALVVPNQNHLEELAQ 632
Cdd:PLN02387 535 RWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFHSYCVALVVPSQQALEKWAK 614
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 633 KHGLGDKSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRM 712
Cdd:PLN02387 615 KAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKREQIRKKFKDDLKKL 694
|
..
gi 24586634 713 YA 714
Cdd:PLN02387 695 YE 696
|
|
| LC-FACS_euk |
cd05927 |
Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS); The members of this family are ... |
129-714 |
1.85e-177 |
|
Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS); The members of this family are eukaryotic fatty acid CoA synthetases that activate fatty acids with chain lengths of 12 to 20. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Organisms tend to have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells.
Pssm-ID: 341250 [Multi-domain] Cd Length: 545 Bit Score: 517.54 E-value: 1.85e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 129 GDYKWKTFTEAERTAANFGRGLRELGQKPREN--IVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDgvahcitetev 206
Cdd:cd05927 1 GPYEWISYKEVAERADNIGSALRSLGGKPAPAsfVGIYSINRPEWIISELACYAYSLVTVPLYDTLGPE----------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 207 ttvitshdllpkfktlldkcplvkTIIYIEDQlQKTETTGFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSG 286
Cdd:cd05927 70 ------------------------AIEYILNH-AEISIVFCDAGVKVYSLEEFEKLGKKNKVPPPPPKPEDLATICYTSG 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 287 STGTPKGVLLSHKNCIAT----MKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYST--PLTLIDtsski 360
Cdd:cd05927 125 TTGNPKGVMLTHGNIVSNvagvFKILEILNKINPTDVYISYLPLAHIFERVVEALFLYHGAKIGFYSgdIRLLLD----- 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 361 krgckgDATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFLYQYKVKWVQRG--YKTPLIDKLVFKKVAKLMG 438
Cdd:cd05927 200 ------DIKALKPTVFPGVPRVLNRIYDKIFNKVQAKGPLKRKLFNFALNYKLAELRSGvvRASPFWDKLVFNKIKQALG 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 439 GKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTnKP 518
Cdd:cd05927 274 GNVRLMLTGSAPLSPEVLEFLRVALGCPVLEGYGQTECTAGATLTLPGDTSVGHVGGPLPCAEVKLVDVPEMNYDAK-DP 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 519 YPQGEVLIGGECVSQGYYKLPGKTNEDFfEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKT 598
Cdd:cd05927 353 NPRGEVCIRGPNVFSGYYKDPEKTAEAL-DEDG--WLHTGDIGEWLPNGTLKIIDRKKNIFKLSQGEYVAPEKIENIYAR 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 599 CGIIENICVYGDPTKQYTVALVVPNQNHLEELAQKHGLGDKSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITL 678
Cdd:cd05927 430 SPFVAQIFVYGDSLKSFLVAIVVPDPDVLKEWAASKGGGTGSFEELCKNPEVKKAILEDLVRLGKENGLKGFEQVKAIHL 509
|
570 580 590
....*....|....*....|....*....|....*.
gi 24586634 679 CKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMYA 714
Cdd:cd05927 510 EPEPFSVENGLLTPTFKLKRPQLKKYYKKQIDEMYK 545
|
|
| PLN02736 |
PLN02736 |
long-chain acyl-CoA synthetase |
84-714 |
4.63e-150 |
|
long-chain acyl-CoA synthetase
Pssm-ID: 178337 [Multi-domain] Cd Length: 651 Bit Score: 451.09 E-value: 4.63e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 84 IDTLEKVFNYVAKTYTSKRCLGTRqilseedeVQQNGRVfkkynlGDYKWKTFTEA--ERTAAnfGRGLRELGQKPRENI 161
Cdd:PLN02736 43 IGTLHDNFVYAVETFRDYKYLGTR--------IRVDGTV------GEYKWMTYGEAgtARTAI--GSGLVQHGIPKGACV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 162 VIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPKFKTLLDKCPLVKTIIYI---EDQ 238
Cdd:PLN02736 107 GLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVggaDEP 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 239 LQKTETTgfkEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDD 318
Cdd:PLN02736 187 LPSLPSG---TGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSD 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 319 VLIGFLPLAHVFELVAESVCLMTGVPIGY--STPLTLIDtsskikrgckgDATVLKPTCMTSVPLILDRISKGINDKVNS 396
Cdd:PLN02736 264 VHISYLPLAHIYERVNQIVMLHYGVAVGFyqGDNLKLMD-----------DLAALRPTIFCSVPRLYNRIYDGITNAVKE 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 397 GSAFKKSLFKFLYQYKVKWVQRGYK-TPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTE 475
Cdd:PLN02736 333 SGGLKERLFNAAYNAKKQALENGKNpSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTE 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 476 TTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWF 555
Cdd:PLN02736 413 TSCVISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTRE-VIDEDG--WL 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 556 KTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYTVALVVPNQNHLEELAQKHG 635
Cdd:PLN02736 490 HTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVVVDPEVLKAWAASEG 569
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24586634 636 LGDKSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMYA 714
Cdd:PLN02736 570 IKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISDMYA 648
|
|
| FAA1 |
COG1022 |
Long-chain acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism]; |
129-714 |
2.41e-137 |
|
Long-chain acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism];
Pssm-ID: 440645 [Multi-domain] Cd Length: 603 Bit Score: 416.81 E-value: 2.41e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 129 GDYKWKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFK-QAMPiVTVYATLGDDGVAHCItetevt 207
Cdd:COG1022 36 GIWQSLTWAEFAERVRALAAGLLALGVKPGDRVAILSDNRPEWVIADLAILAaGAVT-VPIYPTSSAEEVAYIL------ 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 208 tvitSH-----------DLLPKFKTLLDKCPLVKTIIYIEDqlqktetTGFKEGVKILPFNQVVKTGQDSKFEH------ 270
Cdd:COG1022 109 ----NDsgakvlfvedqEQLDKLLEVRDELPSLRHIVVLDP-------RGLRDDPRLLSLDELLALGREVADPAelearr 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTP 350
Cdd:COG1022 178 AAVKPDDLATIIYTSGTTGRPKGVMLTHRNLLSNARALLERLPLGPGDRTLSFLPLAHVFERTVSYYALAAGATVAFAES 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 L-TLIDtsskikrgckgDATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFL----YQY--------KVKWVQ 417
Cdd:COG1022 258 PdTLAE-----------DLREVKPTFMLAVPRVWEKVYAGIQAKAEEAGGLKRKLFRWAlavgRRYararlagkSPSLLL 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 418 RgYKTPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHE--QIktcLCLELIQGYGLTETTSGATVMDYRDMTYGRTGG 495
Cdd:COG1022 327 R-LKHALADKLVFSKLREALGGRLRFAVSGGAALGPELARffRA---LGIPVLEGYGLTETSPVITVNRPGDNRIGTVGP 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 496 PLTVCDIRLVnweegnyrvtnkpyPQGEVLIGGECVSQGYYKLPGKTNEDfFEEDGqrWFKTGDIGEIQADGVLKIIDRK 575
Cdd:COG1022 403 PLPGVEVKIA--------------EDGEILVRGPNVMKGYYKNPEATAEA-FDADG--WLHTGDIGELDEDGFLRITGRK 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 576 KDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDpTKQYTVALVVPNQNHLEELAQKHGLGDKSFEELCSSPIIEKAIL 655
Cdd:COG1022 466 KDLIVTSGGKNVAPQPIENALKASPLIEQAVVVGD-GRPFLAALIVPDFEALGEWAEENGLPYTSYAELAQDPEVRALIQ 544
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 24586634 656 KEIAEhARKcKLQKYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMYA 714
Cdd:COG1022 545 EEVDR-ANA-GLSRAEQIKRFRLLPKEFTIENGELTPTLKLKRKVILEKYADLIEALYA 601
|
|
| PTZ00216 |
PTZ00216 |
acyl-CoA synthetase; Provisional |
66-714 |
4.24e-136 |
|
acyl-CoA synthetase; Provisional
Pssm-ID: 240316 [Multi-domain] Cd Length: 700 Bit Score: 416.68 E-value: 4.24e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 66 YRTTDPPRDVHVKMLQE--NIDTLEKVFNYVAKTYTSKRCLGTRQILSEEDEV--QQNG--RVFKKYNLGDYKWKTFTEA 139
Cdd:PTZ00216 48 YRIAGVTDEEHERLRNEwyYGPNFLQRLERICKERGDRRALAYRPVERVEKEVvkDADGkeRTMEVTHFNETRYITYAEL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 140 ERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPKF 219
Cdd:PTZ00216 128 WERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 220 KTLLDKCPLVKT-IIYIeDQLQKTETTgfkEGVKILPFNQVVKTGQdSKFEHVPPKG----DDIAIIMYTSGSTGTPKGV 294
Cdd:PTZ00216 208 LRLMKSGGMPNTtIIYL-DSLPASVDT---EGCRLVAWTDVVAKGH-SAGSHHPLNIpennDDLALIMYTSGTTGDPKGV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 295 LLSHKNCIATMKGFVDMV-----PIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPLTLIDTSSKIkrgcKGDAT 369
Cdd:PTZ00216 283 MHTHGSLTAGILALEDRLndligPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGSPRTLTDTFARP----HGDLT 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 370 VLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFLYQYKVKWVQRGYKTPLIDKLVFKKVAKLMGGKVRIIMSGGA 449
Cdd:PTZ00216 359 EFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGG 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 450 PLSADTHEQIKTCLCLeLIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEgnYRVTNKPYPQGEVLIGGE 529
Cdd:PTZ00216 439 PLSAATQEFVNVVFGM-VIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEE--YKHTDTPEPRGEILLRGP 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 530 CVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIEN--ICV 607
Cdd:PTZ00216 516 FLFKGYYKQEELTRE-VLDEDG--WFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPngVCV 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 608 YGDPTKQYTVALVVPNQNHLEELAQKHGLGDkSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITLCKEVWSPDM 687
Cdd:PTZ00216 593 LVHPARSYICALVLTDEAKAMAFAKEHGIEG-EYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPEN 671
|
650 660
....*....|....*....|....*..
gi 24586634 688 GLVTAAFKLKRKDIQDRYQHDINRMYA 714
Cdd:PTZ00216 672 GVLTAAMKLKRRVIDERYADLIKELFA 698
|
|
| PLN02430 |
PLN02430 |
long-chain-fatty-acid-CoA ligase |
71-714 |
2.38e-121 |
|
long-chain-fatty-acid-CoA ligase
Pssm-ID: 178049 [Multi-domain] Cd Length: 660 Bit Score: 377.23 E-value: 2.38e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 71 PPRDvhvkmlqENIDTLEKVFNYVAKTYTSKRCLGTRQILSEEdevqqngrvfkkynLGDYKWKTFTEAERTAANFGRGL 150
Cdd:PLN02430 35 PPID-------SDITTAWDIFSKSVEKYPDNKMLGWRRIVDGK--------------VGPYMWKTYKEVYEEVLQIGSAL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 151 RELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDllpKFKTLLD---KCP 227
Cdd:PLN02430 94 RASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDK---KIKELLEpdcKSA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 228 -LVKTIIYIEDQLQKTETTGFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMK 306
Cdd:PLN02430 171 kRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVR 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 307 GfVDMV------PIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPltliDTSSkikrgCKGDATVLKPTCMTSVP 380
Cdd:PLN02430 251 G-VDLFmeqfedKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHG----DLNA-----LRDDLMELKPTLLAGVP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 381 LILDRISKGINDKVNSGSAFKKSLFKFLYQYKVKWVQRGYK----TPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTH 456
Cdd:PLN02430 321 RVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYShkkaSPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIE 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 457 EQIKTCLCLELIQGYGLTETTSGATVMDYRDMTY-GRTGGPLTVCDIRLVNWEEGNYRVTNKPyPQGEVLIGGECVSQGY 535
Cdd:PLN02430 401 EFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMlGTVGAPAVYNELRLEEVPEMGYDPLGEP-PRGEICVRGKCLFSGY 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 536 YKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQY 615
Cdd:PLN02430 480 YKNPELTEEVM--KDG--WFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDSFKSM 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 616 TVALVVPNQNHLEELAQKHGLgDKSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITLCKEVWSPDMGLVTAAFK 695
Cdd:PLN02430 556 LVAVVVPNEENTNKWAKDNGF-TGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLK 634
|
650
....*....|....*....
gi 24586634 696 LKRKDIQDRYQHDINRMYA 714
Cdd:PLN02430 635 KRRNNLLKYYQVEIDEMYR 653
|
|
| VL_LC_FACS_like |
cd05907 |
Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA ... |
129-701 |
2.09e-117 |
|
Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases; This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.
Pssm-ID: 341233 [Multi-domain] Cd Length: 452 Bit Score: 359.99 E-value: 2.09e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 129 GDYKWKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHcitetevtt 208
Cdd:cd05907 1 GVWQPITWAEFAEEVRALAKGLIALGVEPGDRVAILSRNRPEWTIADLAILAIGAVPVPIYPTSSAEQIAY--------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 209 vitshdllpkfktLLDKCplvktiiyiedqlqktettgfkeGVKILpfnqvvktgqdskfehVPPKGDDIAIIMYTSGST 288
Cdd:cd05907 72 -------------ILNDS-----------------------EAKAL----------------FVEDPDDLATIIYTSGTT 99
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 289 GTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVA-ESVCLMTGVPIGYSTPL-TLIDTSSKIKrgckg 366
Cdd:cd05907 100 GRPKGVMLSHRNILSNALALAERLPATEGDRHLSFLPLAHVFERRAgLYVPLLAGARIYFASSAeTLLDDLSEVR----- 174
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 367 datvlkPTCMTSVPLILDRISKGIndKVNSGSAFKKSLFkflyqykvkwvqrgyktplidklvfkkvAKLMGGKVRIIMS 446
Cdd:cd05907 175 ------PTVFLAVPRVWEKVYAAI--KVKAVPGLKRKLF----------------------------DLAVGGRLRFAAS 218
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 447 GGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVnweegnyrvtnkpyPQGEVLI 526
Cdd:cd05907 219 GGAPLPAELLHFFRA-LGIPVYEGYGLTETSAVVTLNPPGDNRIGTVGKPLPGVEVRIA--------------DDGEILV 283
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 527 GGECVSQGYYKLPGKTNEDFfEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENIC 606
Cdd:cd05907 284 RGPNVMLGYYKNPEATAEAL-DADG--WLHTGDLGEIDEDGFLHITGRKKDLIITSGGKNISPEPIENALKASPLISQAV 360
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 607 VYGDpTKQYTVALVVPNQNHLEELAQKHGLGDKSFEELCSSPIIEKAILKEIaEHARKcKLQKYEVPAAITLCKEVWSPD 686
Cdd:cd05907 361 VIGD-GRPFLVALIVPDPEALEAWAEEHGIAYTDVAELAANPAVRAEIEAAV-EAANA-RLSRYEQIKKFLLLPEPFTIE 437
|
570
....*....|....*
gi 24586634 687 MGLVTAAFKLKRKDI 701
Cdd:cd05907 438 NGELTPTLKLKRPVI 452
|
|
| PLN02861 |
PLN02861 |
long-chain-fatty-acid-CoA ligase |
80-714 |
3.91e-112 |
|
long-chain-fatty-acid-CoA ligase
Pssm-ID: 178452 [Multi-domain] Cd Length: 660 Bit Score: 353.38 E-value: 3.91e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 80 LQENIDTLEKVFNYVAKTYTSKRCLGTRQILseedevqqNGRVfkkynlGDYKWKTFTEAERTAANFGRGLRELGQKPRE 159
Cdd:PLN02861 38 LPADIDSPWQFFSDAVKKYPNNQMLGRRQVT--------DSKV------GPYVWLTYKEVYDAAIRIGSAIRSRGVNPGD 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 160 NIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPKFKTLLDKC-PLVKTIIYIED- 237
Cdd:PLN02861 104 RCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCsSNLKTIVSFGDv 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 238 -QLQKTETTgfKEGVKILPFNQVVKTG-QDSKfehVPPK-GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKG-----FV 309
Cdd:PLN02861 184 sSEQKEEAE--ELGVSCFSWEEFSLMGsLDCE---LPPKqKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLStdhllKV 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 310 DMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYstpltlidTSSKIkRGCKGDATVLKPTCMTSVPLILDRISKG 389
Cdd:PLN02861 259 TDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGF--------WQGDI-RYLMEDVQALKPTIFCGVPRVYDRIYTG 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 390 INDKVNSGSAFKKSLFKFLYQYKVKWVQRGYK----TPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCL 465
Cdd:PLN02861 330 IMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKqeeaSPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCS 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 466 ELIQGYGLTETTSGA--TVMDYRDMTyGRTGGPLTVCDIRLVNWEEGNYRVTNKpYPQGEVLIGGECVSQGYYKLPGKTN 543
Cdd:PLN02861 410 VLSQGYGLTESCGGCftSIANVFSMV-GTVGVPMTTIEARLESVPEMGYDALSD-VPRGEICLRGNTLFSGYHKRQDLTE 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 544 EDFFeeDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYTVALVVPN 623
Cdd:PLN02861 488 EVLI--DG--WFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSFESFLVAVVVPD 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 624 QNHLEELAQKHGLGDkSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQD 703
Cdd:PLN02861 564 RQALEDWAANNNKTG-DFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLK 642
|
650
....*....|.
gi 24586634 704 RYQHDINRMYA 714
Cdd:PLN02861 643 YYKDCIDQLYS 653
|
|
| PLN02614 |
PLN02614 |
long-chain acyl-CoA synthetase |
82-715 |
1.20e-106 |
|
long-chain acyl-CoA synthetase
Pssm-ID: 166255 [Multi-domain] Cd Length: 666 Bit Score: 339.30 E-value: 1.20e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 82 ENIDTLEKVFNYVAKTYTSKRCLGTRQILseedevqqNGRVfkkynlGDYKWKTFTEAERTAANFGRGLRELGQKPRENI 161
Cdd:PLN02614 42 EGMDSCWDVFRMSVEKYPNNPMLGRREIV--------DGKP------GKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKC 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 162 VIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPK-FKTLLDKCPLVKTIIYIE--DQ 238
Cdd:PLN02614 108 GIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISElFKTCPNSTEYMKTVVSFGgvSR 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 239 LQKTETTGFkeGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMV-----P 313
Cdd:PLN02614 188 EQKEEAETF--GLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLksanaA 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 314 IYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPltliDTSSKIKrgckgDATVLKPTCMTSVPLILDRISKGINDK 393
Cdd:PLN02614 266 LTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRG----DVKLLIE-----DLGELKPTIFCAVPRVLDRVYSGLQKK 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 394 VNSGSAFKKSLFKFLYQYKVKWVQRGYK----TPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQ 469
Cdd:PLN02614 337 LSDGGFLKKFVFDSAFSYKFGNMKKGQShveaSPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQ 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 470 GYGLTETTSG--ATVMDYRDMtYGRTGGPLTVCDIRLVNWEEGNYRVTNKPyPQGEVLIGGECVSQGYYKLPGKTNEDFF 547
Cdd:PLN02614 417 GYGLTESCAGtfVSLPDELDM-LGTVGPPVPNVDIRLESVPEMEYDALAST-PRGEICIRGKTLFSGYYKREDLTKEVLI 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 548 eeDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYTVALVVPNQNHL 627
Cdd:PLN02614 495 --DG--WLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFESFLVAIANPNQQIL 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 628 EELAQKHGL-GDksFEELCSSPIIEKAILKEIAEHARKCKLQKYEVPAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQ 706
Cdd:PLN02614 571 ERWAAENGVsGD--YNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQ 648
|
....*....
gi 24586634 707 HDINRMYAS 715
Cdd:PLN02614 649 SVIDEMYKT 657
|
|
| AMP-binding |
pfam00501 |
AMP-binding enzyme; |
126-582 |
1.01e-93 |
|
AMP-binding enzyme;
Pssm-ID: 459834 [Multi-domain] Cd Length: 417 Bit Score: 297.30 E-value: 1.01e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 126 YNLGDYKWKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETE 205
Cdd:pfam00501 14 LEVGEGRRLTYRELDERANRLAAGLRALGVGKGDRVAILLPNSPEWVVAFLACLKAGAVYVPLNPRLPAEELAYILEDSG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 206 VTTV-ITSHDLLPKFKTLLDKCPLVKTIIYIEdqlqktettgFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYT 284
Cdd:pfam00501 94 AKVLiTDDALKLEELLEALGKLEVVKLVLVLD----------RDPVLKEEPLPEEAKPADVPPPPPPPPDPDDLAYIIYT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 285 SGSTGTPKGVLLSHKNCIATMKGFVDMVP----IYPDDVLIGFLPLAHVFELVAE-SVCLMTGVPIGYSTPLTLIDTssk 359
Cdd:pfam00501 164 SGTTGKPKGVMLTHRNLVANVLSIKRVRPrgfgLGPDDRVLSTLPLFHDFGLSLGlLGPLLAGATVVLPPGFPALDP--- 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 360 ikRGCKGDATVLKPTCMTSVPLILDRIskgindkVNSGsAFKKSLFkflyqykvkwvqrgyktplidklvfkkvaklmgG 439
Cdd:pfam00501 241 --AALLELIERYKVTVLYGVPTLLNML-------LEAG-APKRALL---------------------------------S 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 440 KVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATV---MDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTN 516
Cdd:pfam00501 278 SLRLVLSGGAPLPPELARRFRELFGGALVNGYGLTETTGVVTTplpLDEDLRSLGSVGRPLPGTEVKIVDDETGEPVPPG 357
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24586634 517 KPypqGEVLIGGECVSQGYYKLPGKTNEDFFEEdgqRWFKTGDIGEIQADGVLKIIDRKKDLVKLQ 582
Cdd:pfam00501 358 EP---GELCVRGPGVMKGYLNDPELTAEAFDED---GWYRTGDLGRRDEDGYLEIVGRKKDQIKLG 417
|
|
| LC_FACS_like |
cd17640 |
Long-chain fatty acid CoA synthetase; This family includes long-chain fatty acid (C12-C20) CoA ... |
129-698 |
9.73e-72 |
|
Long-chain fatty acid CoA synthetase; This family includes long-chain fatty acid (C12-C20) CoA synthetases, including an Arabidopsis gene At4g14070 that plays a role in activation and elongation of exogenous fatty acids. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.
Pssm-ID: 341295 [Multi-domain] Cd Length: 468 Bit Score: 241.11 E-value: 9.73e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 129 GDYKWKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGcfkqAMPIVTVYATLGDDgvahcitetevtt 208
Cdd:cd17640 1 KPPKRITYKDLYQEILDFAAGLRSLGVKAGEKVALFADNSPRWLIADQG----IMALGAVDVVRGSD------------- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 209 vITSHDLLpkfktlldkcplvktiiYIedqlqktettgfkegvkilpFNQVvktgqDSKFEHVPPKGDDIAIIMYTSGST 288
Cdd:cd17640 64 -SSVEELL-----------------YI--------------------LNHS-----ESVALVVENDSDDLATIIYTSGTT 100
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 289 GTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPLTLidtsskikrgcKGDA 368
Cdd:cd17640 101 GNPKGVMLTHANLLHQIRSLSDIVPPQPGDRFLSILPIWHSYERSAEYFIFACGCSQAYTSIRTL-----------KDDL 169
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 369 TVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFLyqykvkwvqrgyktplidklvfkkvakLMGGKVRIIMSGG 448
Cdd:cd17640 170 KRVKPHYIVSVPRLWESLYSGIQKQVSKSSPIKQFLFLFF---------------------------LSGGIFKFGISGG 222
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 449 A--PLSADT-HEQIKtclcLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNwEEGNyrVTNKPYPQGEVL 525
Cdd:cd17640 223 GalPPHVDTfFEAIG----IEVLNGYGLTETSPVVSARRLKCNVRGSVGRPLPGTEIKIVD-PEGN--VVLPPGEKGIVW 295
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 526 IGGECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENI 605
Cdd:cd17640 296 VRGPQVMKGYYKNPEATSK-VLDSDG--WFNTGDLGWLTCGGELVLTGRAKDTIVLSNGENVEPQPIEEALMRSPFIEQI 372
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 606 CVYGDPTKQYTvALVVPNQNHLEELAQKHGLG-DKSFEELCSSPIIEKAILKEIAEHARKCKLQK-YEVPAAITLCKEVW 683
Cdd:cd17640 373 MVVGQDQKRLG-ALIVPNFEELEKWAKESGVKlANDRSQLLASKKVLKLYKNEIKDEISNRPGFKsFEQIAPFALLEEPF 451
|
570
....*....|....*
gi 24586634 684 SPDmGLVTAAFKLKR 698
Cdd:cd17640 452 IEN-GEMTQTMKIKR 465
|
|
| MenE/FadK |
COG0318 |
O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) [Lipid ... |
135-706 |
1.09e-60 |
|
O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism]; O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) is part of the Pathway/BioSystem: Menaquinone biosynthesis
Pssm-ID: 440087 [Multi-domain] Cd Length: 452 Bit Score: 210.82 E-value: 1.09e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCitetevttvitshd 214
Cdd:COG0318 26 TYAELDARARRLAAALRALGVGPGDRVALLLPNSPEFVVAFLAALRAGAVVVPLNPRLTAEELAYI-------------- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 215 llpkfktlLDKCplvktiiyiedqlqktettgfkeGVKILpfnqVVktgqdskfehvppkgddiAIIMYTSGSTGTPKGV 294
Cdd:COG0318 92 --------LEDS-----------------------GARAL----VT------------------ALILYTSGTTGRPKGV 118
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 295 LLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESV-CLMTG---VPIGYSTPLTLIDTsskIKRGckgdatv 370
Cdd:COG0318 119 MLTHRNLLANAAAIAAALGLTPGDVVLVALPLFHVFGLTVGLLaPLLAGatlVLLPRFDPERVLEL---IERE------- 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 371 lKPTCMTSVPLILDRIskgindkvnsgsafkkslfkflyqykvkwvqrgYKTPLIDKLVFkkvaklmgGKVRIIMSGGAP 450
Cdd:COG0318 189 -RVTVLFGVPTMLARL---------------------------------LRHPEFARYDL--------SSLRLVVSGGAP 226
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 451 LSADTHEQIKTCLCLELIQGYGLTETTSGATV--MDYRDMTYGRTGGPLTVCDIRLVNwEEGNyrvtnkPYPQ---GEVL 525
Cdd:COG0318 227 LPPELLERFEERFGVRIVEGYGLTETSPVVTVnpEDPGERRPGSVGRPLPGVEVRIVD-EDGR------ELPPgevGEIV 299
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 526 IGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVESELKTCGIIENI 605
Cdd:COG0318 300 VRGPNVMKGYWNDPEATAEAF--RDG--WLRTGDLGRLDEDGYLYIVGRKKDMIIS-GGENVYPAEVEEVLAAHPGVAEA 374
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 606 CVYGDPTKQY---TVALVVPNQNHLEELAqkhglgdksfeelcsspiiekailkEIAEHARKcKLQKYEVPAAITLCKEV 682
Cdd:COG0318 375 AVVGVPDEKWgerVVAFVVLRPGAELDAE-------------------------ELRAFLRE-RLARYKVPRRVEFVDEL 428
|
570 580
....*....|....*....|....
gi 24586634 683 wsPdmglVTAAFKLKRKDIQDRYQ 706
Cdd:COG0318 429 --P----RTASGKIDRRALRERYA 446
|
|
| LC_FACS_bac |
cd05932 |
Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter ... |
130-705 |
6.94e-58 |
|
Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase; The members of this family are bacterial long-chain fatty acid CoA synthetase. Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase in this family is involved in the synthesis of isoprenoid wax ester storage compounds when grown on phytol as the sole carbon source. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.
Pssm-ID: 341255 [Multi-domain] Cd Length: 508 Bit Score: 204.62 E-value: 6.94e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 130 DYKWKTFTEAERTAANFgrgLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTV 209
Cdd:cd05932 6 EFTWGEVADKARRLAAA---LRALGLEPGSKIALISKNCAEWFITDLAIWMAGHISVPLYPTLNPDTIRYVLEHSESKAL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 210 itshdllpkFKTLLDKCP---------LVKTIIYIEDQLQKTETtgfkegvkilpFNQVVKTGQDSKfEHVPPKGDDIAI 280
Cdd:cd05932 83 ---------FVGKLDDWKamapgvpegLISISLPPPSAANCQYQ-----------WDDLIAQHPPLE-ERPTRFPEQLAT 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 281 IMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVA-ESVCLMTGVPIGYSTPLtliDT-SS 358
Cdd:cd05932 142 LIYTSGTTGQPKGVMLTFGSFAWAAQAGIEHIGTEENDRMLSYLPLAHVTERVFvEGGSLYGGVLVAFAESL---DTfVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 359 KIKRGckgdatvlKPTCMTSVPLILDRISKGINDKVnsgsafkkslfkflyqyKVKWVQRGYKTPLIDKLVFKKVAKLMG 438
Cdd:cd05932 219 DVQRA--------RPTLFFSVPRLWTKFQQGVQDKI-----------------PQQKLNLLLKIPVVNSLVKRKVLKGLG 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 439 -GKVRIIMSGGAPLSADTHEQIKTcLCLELIQGYGLTEtTSGATVMDY--RDMTyGRTGGPLTVCDIRLVnweegnyrvt 515
Cdd:cd05932 274 lDQCRLAGCGSAPVPPALLEWYRS-LGLNILEAYGMTE-NFAYSHLNYpgRDKI-GTVGNAGPGVEVRIS---------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 516 nkpyPQGEVLIGGECVSQGYYKLPGKTNEDfFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKVESE 595
Cdd:cd05932 341 ----EDGEILVRSPALMMGYYKDPEATAEA-FTADG--FLRTGDKGELDADGNLTITGRVKDIFKTSKGKYVAPAPIENK 413
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 596 LKTCGIIENICVYGDPTKQyTVALVVPNQN-HLEELAQKHGLGDKSFeelcsspiieKAILKEIAEHarkckLQKYEVPA 674
Cdd:cd05932 414 LAEHDRVEMVCVIGSGLPA-PLALVVLSEEaRLRADAFARAELEASL----------RAHLARVNST-----LDSHEQLA 477
|
570 580 590
....*....|....*....|....*....|.
gi 24586634 675 AITLCKEVWSPDMGLVTAAFKLKRKDIQDRY 705
Cdd:cd05932 478 GIVVVKDPWSIDNGILTPTLKIKRNVLEKAY 508
|
|
| AFD_class_I |
cd04433 |
Adenylate forming domain, Class I, also known as the ANL superfamily; This family is known as ... |
277-632 |
3.15e-52 |
|
Adenylate forming domain, Class I, also known as the ANL superfamily; This family is known as the ANL (acyl-CoA synthetases, the NRPS adenylation domains, and the Luciferase enzymes) superfamily. It includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases.The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain.
Pssm-ID: 341228 [Multi-domain] Cd Length: 336 Bit Score: 184.03 E-value: 3.15e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTG---VPIGYSTPLTL 353
Cdd:cd04433 1 DPALILYTSGTTGKPKGVVLSHRNLLAAAAALAASGGLTEGDVFLSTLPLFHIGGLFGLLGALLAGgtvVLLPKFDPEAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 354 IDTsskIKRgckgdatvLKPTCMTSVPLILDRISKGINDKVNSGSAfkkslfkflyqykvkwvqrgyktplidklvfkkv 433
Cdd:cd04433 81 LEL---IER--------EKVTILLGVPTLLARLLKAPESAGYDLSS---------------------------------- 115
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 434 aklmggkVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVM--DYRDMTYGRTGGPLTVCDIRLVNwEEGN 511
Cdd:cd04433 116 -------LRALVSGGAPLPPELLERFEEAPGIKLVNGYGLTETGGTVATGppDDDARKPGSVGRPVPGVEVRIVD-PDGG 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 512 YRVTNKPypqGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGK 591
Cdd:cd04433 188 ELPPGEI---GELVVRGPSVMKGYWNNPEATAAVD--EDG--WYRTGDLGRLDEDGYLYIVGRLKDMIKSG-GENVYPAE 259
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 24586634 592 VESELKTC-GIIEnICVYG--DPTK-QYTVALVVPNQNH---LEELAQ 632
Cdd:cd04433 260 VEAVLLGHpGVAE-AAVVGvpDPEWgERVVAVVVLRPGAdldAEELRA 306
|
|
| LC_FACL_like |
cd05914 |
Uncharacterized subfamily of fatty acid CoA ligase (FACL); The members of this family are ... |
276-633 |
5.11e-50 |
|
Uncharacterized subfamily of fatty acid CoA ligase (FACL); The members of this family are bacterial long-chain fatty acid CoA synthetase, most of which are as yet uncharacterized. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.
Pssm-ID: 341240 [Multi-domain] Cd Length: 463 Bit Score: 181.87 E-value: 5.11e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFElvaesvCLMTGV-PIGYSTPLTLI 354
Cdd:cd05914 89 DDVALINYTSGTTGNSKGVMLTYRNIVSNVDGVKEVVLLGKGDKILSILPLHHIYP------LTFTLLlPLLNGAHVVFL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 D--TSSKIKRGCKGDatvLKPTCMTSVPLILDRISKgiNDKVNsgsafKKSLFKFLYQYKVKWVQRGyktplIDKLVFKK 432
Cdd:cd05914 163 DkiPSAKIIALAFAQ---VTPTLGVPVPLVIEKIFK--MDIIP-----KLTLKKFKFKLAKKINNRK-----IRKLAFKK 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 433 VAKLMGGKVRIIMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRlvnweegny 512
Cdd:cd05914 228 VHEAFGGNIKEFVIGGAKINPDVEEFLRT-IGFPYTIGYGMTETAPIISYSPPNRIRLGSAGKVIDGVEVR--------- 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 513 rvTNKPYPQ---GEVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSL 589
Cdd:cd05914 298 --IDSPDPAtgeGEIIVRGPNVMKGYYKNPEATAE-AFDKDG--WFHTGDLGKIDAEGYLYIRGRKKEMIVLSSGKNIYP 372
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 24586634 590 GKVESEL--KTCGIIENICVygdpTKQYTVALVVPNQNHLEELAQK 633
Cdd:cd05914 373 EEIEAKInnMPFVLESLVVV----QEKKLVALAYIDPDFLDVKALK 414
|
|
| Firefly_Luc_like |
cd05911 |
Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL); This family ... |
135-634 |
2.00e-48 |
|
Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL); This family contains insect firefly luciferases that share significant sequence similarity to plant 4-coumarate:coenzyme A ligases, despite their functional diversity. Luciferase catalyzes the production of light in the presence of MgATP, molecular oxygen, and luciferin. In the first step, luciferin is activated by acylation of its carboxylate group with ATP, resulting in an enzyme-bound luciferyl adenylate. In the second step, luciferyl adenylate reacts with molecular oxygen, producing an enzyme-bound excited state product (Luc=O*) and releasing AMP. This excited-state product then decays to the ground state (Luc=O), emitting a quantum of visible light.
Pssm-ID: 341237 [Multi-domain] Cd Length: 486 Bit Score: 177.79 E-value: 2.00e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHD 214
Cdd:cd05911 12 TYAQLRTLSRRLAAGLRKLGLKKGDVVGIISPNSTYYPPVFLGCLFAGGIFSAANPIYTADELAHQLKISKPKVIFTDPD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 215 LLPKFKTLLDKCPLVKTIIYIEDQLQKtettgfkegvkILPFNQVVKTGQDSKFEHVPP----KGDDIAIIMYTSGSTGT 290
Cdd:cd05911 92 GLEKVKEAAKELGPKDKIIVLDDKPDG-----------VLSIEDLLSPTLGEEDEDLPPplkdGKDDTAAILYSSGTTGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 291 PKGVLLSHKNCIATMK--GFVDMVPIYPDDVLIGFLPLAHvfelvaesvclMTGVPIGYSTPLtlidtsskikRGCkgda 368
Cdd:cd05911 161 PKGVCLSHRNLIANLSqvQTFLYGNDGSNDVILGFLPLYH-----------IYGLFTTLASLL----------NGA---- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 369 TVLKPTCMTSVPLiLDRISKgindkvnsgsafkkslfkflyqYKVKW-------VQRGYKTPLIDKlvfkkvAKLmgGKV 441
Cdd:cd05911 216 TVIIMPKFDSELF-LDLIEK----------------------YKITFlylvppiAAALAKSPLLDK------YDL--SSL 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 442 RIIMSGGAPLSADTHEQIKTCLCL-ELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTNKPyp 520
Cdd:cd05911 265 RVILSGGAPLSKELQELLAKRFPNaTIKQGYGMTETGGILTVNPDGDDKPGSVGRLLPNVEAKIVDDDGKDSLGPNEP-- 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 521 qGEVLIGGECVSQGYYKLPGKTNEDFFEEDgqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCG 600
Cdd:cd05911 343 -GEICVRGPQVMKGYYNNPEATKETFDEDG---WLHTGDIGYFDEDGYLYIVDRKKELIKYK-GFQVAPAELEAVLLEHP 417
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 24586634 601 IIENICVYG--DPTK-QYTVALVVPNQN------HLEELAQKH 634
Cdd:cd05911 418 GVADAAVIGipDEVSgELPRAYVVRKPGekltekEVKDYVAKK 460
|
|
| LC_FACS_bac1 |
cd17641 |
bacterial long-chain fatty acid CoA synthetase; The members of this family are bacterial ... |
133-705 |
9.69e-48 |
|
bacterial long-chain fatty acid CoA synthetase; The members of this family are bacterial long-chain fatty acid CoA synthetase, most of which are as yet uncharacterized. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.
Pssm-ID: 341296 [Multi-domain] Cd Length: 569 Bit Score: 177.61 E-value: 9.69e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 133 WKTFT--EAERTAANFGRGLRELGQKPRENIVIFAETRAEW---MIAAHGCfkQAMPiVTVYATLGDDGVA----HCITE 203
Cdd:cd17641 9 WQEFTwaDYADRVRAFALGLLALGVGRGDVVAILGDNRPEWvwaELAAQAI--GALS-LGIYQDSMAEEVAyllnYTGAR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 204 TEVTTVITSHDllpKFKTLLDKCPLVKTIIYIEdqlqKTETTGFKEGvKILPFNQVVKTGQDSKFEHvpP---------- 273
Cdd:cd17641 86 VVIAEDEEQVD---KLLEIADRIPSVRYVIYCD----PRGMRKYDDP-RLISFEDVVALGRALDRRD--Pglyerevaag 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 274 KGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFE-LVAESVCLMTGVPIGY-STPL 351
Cdd:cd17641 156 KGEDVAVLCTTSGTTGKPKLAMLSHGNFLGHCAAYLAADPLGPGDEYVSVLPLPWIGEqMYSVGQALVCGFIVNFpEEPE 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 352 TLidtsskikrgcKGDATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKFLYQYKVKWVQRGYKTP-------- 423
Cdd:cd17641 236 TM-----------MEDLREIGPTFVLLPPRVWEGIAADVRARMMDATPFKRFMFELGMKLGLRALDRGKRGRpvslwlrl 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 424 ---LIDKLVFKKVAKLMG-GKVRIIMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTV 499
Cdd:cd17641 305 aswLADALLFRPLRDRLGfSRLRSAATGGAALGPDTFRFFHA-IGVPLKQLYGQTELAGAYTVHRDGDVDPDTVGVPFPG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 500 CDIRLVNweegnyrvtnkpypQGEVLIGGECVSQGYYKLPGKTNEDfFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLV 579
Cdd:cd17641 384 TEVRIDE--------------VGEILVRSPGVFVGYYKNPEATAED-FDEDG--WLHTGDAGYFKENGHLVVIDRAKDVG 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 580 KLQAGEYVSLGKVESELKTCGIIENICVYGDpTKQYTVALVVPNQNHLEELAQKHGLGDKSFEELCSSPIIEKAILKEI- 658
Cdd:cd17641 447 TTSDGTRFSPQFIENKLKFSPYIAEAVVLGA-GRPYLTAFICIDYAIVGKWAEQRGIAFTTYTDLASRPEVYELIRKEVe 525
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 24586634 659 ---AEHARKCKLQKYevpaaITLCKEVwSPDMGLVTAAFKLKRKDIQDRY 705
Cdd:cd17641 526 kvnASLPEAQRIRRF-----LLLYKEL-DADDGELTRTRKVRRGVIAEKY 569
|
|
| PRK06187 |
PRK06187 |
long-chain-fatty-acid--CoA ligase; Validated |
212-705 |
1.96e-44 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 235730 [Multi-domain] Cd Length: 521 Bit Score: 167.29 E-value: 1.96e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 212 SHDLLPKFKTLLDKCPLVKTIIYIEDqlqkteTTGFKEGVKILPFNQVVKtGQDSKFEHVPPKGDDIAIIMYTSGSTGTP 291
Cdd:PRK06187 110 DSEFVPLLAAILPQLPTVRTVIVEGD------GPAAPLAPEVGEYEELLA-AASDTFDFPDIDENDAAAMLYTSGTTGHP 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 292 KGVLLSHKN-------CIATMKgfvdmvpIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGY------STPLTLIDTss 358
Cdd:PRK06187 183 KGVVLSHRNlflhslaVCAWLK-------LSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIprrfdpENLLDLIET-- 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 359 kikrgckgdatvLKPTCMTSVPLILDRISKgindkvnsgsafkkslfkflyqykvkwvqrgYKTPlidklVFKKVAKLmg 438
Cdd:PRK06187 254 ------------ERVTFFFAVPTIWQMLLK-------------------------------APRA-----YFVDFSSL-- 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 439 gkvRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGR------TGGPLTVCDIRLVNwEEGNy 512
Cdd:PRK06187 284 ---RLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQwtkrrsAGRPLPGVEARIVD-DDGD- 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 513 RVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKV 592
Cdd:PRK06187 359 ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI--DGG--WLHTGDVGYIDEDGYLYITDRIKDVII-SGGENIYPREL 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 593 ESELKTCGIIENICVYGDPTKQY---TVALVVPnqnhleelaqKHGlgdksfeelcsspiiEKAILKEIAEHARKcKLQK 669
Cdd:PRK06187 434 EDALYGHPAVAEVAVIGVPDEKWgerPVAVVVL----------KPG---------------ATLDAKELRAFLRG-RLAK 487
|
490 500 510
....*....|....*....|....*....|....*.
gi 24586634 670 YEVPAAITLCKEVwsPDmglvTAAFKLKRKDIQDRY 705
Cdd:PRK06187 488 FKLPKRIAFVDEL--PR----TSVGKILKRVLREQY 517
|
|
| PTZ00342 |
PTZ00342 |
acyl-CoA synthetase; Provisional |
250-698 |
2.46e-44 |
|
acyl-CoA synthetase; Provisional
Pssm-ID: 240370 [Multi-domain] Cd Length: 746 Bit Score: 170.28 E-value: 2.46e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 250 GVKILPFNQVVKTgQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVD--MVPIYPDDVLIGFLPLA 327
Cdd:PTZ00342 279 GISIILFDDMTKN-KTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKhsIFKKYNPKTHLSYLPIS 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 328 HVFELVAESVCLMTGVPIgystpltliDTSSK-IKRGCKgDATVLKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFK 406
Cdd:PTZ00342 358 HIYERVIAYLSFMLGGTI---------NIWSKdINYFSK-DIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVK 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 407 FLYQYKvKWVQRGYKTPLIDKL--VFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMD 484
Cdd:PTZ00342 428 KILSLR-KSNNNGGFSKFLEGIthISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQH 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 485 YRDMTYGRTGGPLTV-CDIRLVNWEegNYRVTNKPyPQGEVLIGGECVSQGYYkLPGKTNEDFFEEDGqrWFKTGDIGEI 563
Cdd:PTZ00342 507 ADDNNTESIGGPISPnTKYKVRTWE--TYKATDTL-PKGELLIKSDSIFSGYF-LEKEQTKNAFTEDG--YFKTGDIVQI 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 564 QADGVLKIIDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYTVALVVPNQN----HLEE--LAQKHGLG 637
Cdd:PTZ00342 581 NKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSMDGPLAIISVDKYllfkCLKDdnMLESTGIN 660
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 638 DKSFEELCSSPIIEKAI----LKE-IAEHARKCKLQKYEVPAAITLCKEVWspDM-GLVTAAFKLKR 698
Cdd:PTZ00342 661 EKNYLEKLTDETINNNIyvdyVKGkMLEVYKKTNLNRYNIINDIYLTSKVW--DTnNYLTPTFKVKR 725
|
|
| FC-FACS_FadD_like |
cd05936 |
Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD; This ... |
132-677 |
3.29e-43 |
|
Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD; This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341259 [Multi-domain] Cd Length: 468 Bit Score: 162.73 E-value: 3.29e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 132 KWKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHcitetevttvit 211
Cdd:cd05936 23 RKLTYRELDALAEAFAAGLQNLGVQPGDRVALMLPNCPQFPIAYFGALKAGAVVVPLNPLYTPRELEH------------ 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 212 shdllpkfktLLDKCplvktiiyiedqlqktettGFKEGVKILPFNQVVKTGQDSKFEhVPPKGDDIAIIMYTSGSTGTP 291
Cdd:cd05936 91 ----------ILNDS-------------------GAKALIVAVSFTDLLAAGAPLGER-VALTPEDVAVLQYTSGTTGVP 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 292 KGVLLSHKN-------CIATMKGFVDmvpiyPDDVLIGFLPLAHVFELvaeSVCLMTGVPIGYS-------TPLTLIDTs 357
Cdd:cd05936 141 KGAMLTHRNlvanalqIKAWLEDLLE-----GDDVVLAALPLFHVFGL---TVALLLPLALGATivliprfRPIGVLKE- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 358 skIKRGckgdatvlKPTCMTSVPLILDRIskgindkVNSgSAFKKSLFKflyqykvkwvqrgyktplidklvfkkvaklm 437
Cdd:cd05936 212 --IRKH--------RVTIFPGVPTMYIAL-------LNA-PEFKKRDFS------------------------------- 242
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 438 ggKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTY-GRTGGPLTVCDIRLVNwEEGNyrvTN 516
Cdd:cd05936 243 --SLRLCISGGAPLPVEVAERFEELTGVPIVEGYGLTETSPVVAVNPLDGPRKpGSIGIPLPGTEVKIVD-DDGE---EL 316
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 517 KPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESEL 596
Cdd:cd05936 317 PPGEVGELWVRGPQVMKGYWNRPEETAEAF--VDG--WLRTGDIGYMDEDGYFFIVDRKKDMI-IVGGFNVYPREVEEVL 391
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 597 KTCGIIENICVYGDPTKQY---TVALVVPnqnhleelaqKHGlgdksfeelcsspiiEKAILKEIAEHARKcKLQKYEVP 673
Cdd:cd05936 392 YEHPAVAEAAVVGVPDPYSgeaVKAFVVL----------KEG---------------ASLTEEEIIAFCRE-QLAGYKVP 445
|
....
gi 24586634 674 AAIT 677
Cdd:cd05936 446 RQVE 449
|
|
| AFD_CAR-like |
cd17632 |
adenylation domain of carboxylic acid reductase (CAR); This family contains the adenylation ... |
272-692 |
1.83e-42 |
|
adenylation domain of carboxylic acid reductase (CAR); This family contains the adenylation domain of carboxylic acid reductase enzymes (CARs), and performs an equivalent function to that of the ANL superfamily of adenylating enzymes. It takes a carboxylic acid substrate and ATP, and produces an AMP-acyl phosphoester intermediate, releasing pyrophosphate. Kinetic analysis using various substrates shows that this enzyme has a broad but similar substrate specificity, preferring electron-rich acids. This suggests that attack by the carboxylate on the alpha-phosphate of adenosine triphosphate (ATP) is the step that determines the substrate specificity and reaction kinetics. CAR is an important enzyme for use as a biocatalyst providing regiospecific route to aldehydes from their respective carboxylic acids.
Pssm-ID: 341287 [Multi-domain] Cd Length: 588 Bit Score: 163.01 E-value: 1.83e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 272 PPKGDDIAIIMYTSGSTGTPKGVLLSHKNcIATM----KGFVDMVPiyPDDVLIGFLPLAHVFELVAESVCLMTGvPIGY 347
Cdd:cd17632 219 EPDDDPLALLIYTSGSTGTPKGAMYTERL-VATFwlkvSSIQDIRP--PASITLNFMPMSHIAGRISLYGTLARG-GTAY 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 348 STPL----TLIDtsskikrgckgDATVLKPTCMTSVPLILDRIskgindkvnsgsaFKKslfkflYQYKV-KWVQRGykt 422
Cdd:cd17632 295 FAAAsdmsTLFD-----------DLALVRPTELFLVPRVCDML-------------FQR------YQAELdRRSVAG--- 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 423 plIDKLVFKKVAK------LMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETtsGATVMDyrdmtyGRTGGP 496
Cdd:cd17632 342 --ADAETLAERVKaelrerVLGGRLLAAVCGSAPLSAEMKAFMESLLDLDLHDGYGSTEA--GAVILD------GVIVRP 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 497 lTVCDIRLVNWEEGNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDI-GEIQADGvLKIIDRK 575
Cdd:cd17632 412 -PVLDYKLVDVPELGYFRTDRPHPRGELLVKTDTLFPGYYKRPEVTAE-VFDEDG--FYRTGDVmAELGPDR-LVYVDRR 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 576 KDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYTVALVVPNQNHLEelaqkhGLGDksfEELcsspiieKAIL 655
Cdd:cd17632 487 NNVLKLSQGEFVTVARLEAVFAASPLVRQIFVYGNSERAYLLAVVVPTQDALA------GEDT---ARL-------RAAL 550
|
410 420 430
....*....|....*....|....*....|....*...
gi 24586634 656 KE-IAEHARKCKLQKYEVPAAITLCKEVWSPDMGLVTA 692
Cdd:cd17632 551 AEsLQRIAREAGLQSYEIPRDFLIETEPFTIANGLLSG 588
|
|
| PRK07656 |
PRK07656 |
long-chain-fatty-acid--CoA ligase; Validated |
135-579 |
1.54e-39 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 236072 [Multi-domain] Cd Length: 513 Bit Score: 153.14 E-value: 1.54e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQ---AMPIVTVYAT------LGDDGVAhcitete 205
Cdd:PRK07656 32 TYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAgavVVPLNTRYTAdeaayiLARGDAK------- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 206 vtTVITSHDLLPKFKTLLDKCPLVKTIIYIEDqlqkteTTGFKEGVKILPFNQVVKTGQDSKFEhVPPKGDDIAIIMYTS 285
Cdd:PRK07656 105 --ALFVLGLFLGVDYSATTRLPALEHVVICET------EEDDPHTEKMKTFTDFLAAGDPAERA-PEVDPDDVADILFTS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 286 GSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFEL-VAESVCLMTGVPIgysTPLTLIDTSSKIKRGC 364
Cdd:PRK07656 176 GTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYkAGVNAPLMRGATI---LPLPVFDPDEVFRLIE 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 365 KGDATVLK--PTcmtsvplildriskgindkvnsgsafkksLFKFLYQYkvkwvqrgyktpliDKLVFKKVAKLmggkvR 442
Cdd:PRK07656 253 TERITVLPgpPT-----------------------------MYNSLLQH--------------PDRSAEDLSSL-----R 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 443 IIMSGGAPLSADTHEQIKTCL-CLELIQGYGLTEtTSGATVM----DYRDMTYGRTGGPLTVCDIRLVNwEEGNYRVTNK 517
Cdd:PRK07656 285 LAVTGAASMPVALLERFESELgVDIVLTGYGLSE-ASGVTTFnrldDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGE 362
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24586634 518 PypqGEVLIGGECVSQGYYKLPGKTNEDfFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLV 579
Cdd:PRK07656 363 V---GELLVRGPNVMKGYYDDPEATAAA-IDADG--WLHTGDLGRLDEEGYLYIVDRKKDMF 418
|
|
| MCS |
cd05941 |
Malonyl-CoA synthetase (MCS); MCS catalyzes the formation of malonyl-CoA in a two-step ... |
277-691 |
1.10e-38 |
|
Malonyl-CoA synthetase (MCS); MCS catalyzes the formation of malonyl-CoA in a two-step reaction consisting of the adenylation of malonate with ATP, followed by malonyl transfer from malonyl-AMP to CoA. Malonic acid and its derivatives are the building blocks of polyketides and malonyl-CoA serves as the substrate of polyketide synthases. Malonyl-CoA synthetase has broad substrate tolerance and can activate a variety of malonyl acid derivatives. MCS may play an important role in biosynthesis of polyketides, the important secondary metabolites with therapeutic and agrochemical utility.
Pssm-ID: 341264 [Multi-domain] Cd Length: 442 Bit Score: 148.98 E-value: 1.10e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVC-LMTGVPIGYstpLTLID 355
Cdd:cd05941 90 DPALILYTSGTTGRPKGVVLTHANLAANVRALVDAWRWTEDDVLLHVLPLHHVHGLVNALLCpLFAGASVEF---LPKFD 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 356 TSSKIKRGCKGDATVLkptcmTSVPLILDRISKGINDKVNSGSAFKKSLFKflyqykvkwvqrgyktplidklvfkkvak 435
Cdd:cd05941 167 PKEVAISRLMPSITVF-----MGVPTIYTRLLQYYEAHFTDPQFARAAAAE----------------------------- 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 436 lmggKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTET---TSGATVMDYRDmtyGRTGGPLTVCDIRLVNWEEGNY 512
Cdd:cd05941 213 ----RLRLMVSGSAALPVPTLEEWEAITGHTLLERYGMTEIgmaLSNPLDGERRP---GTVGMPLPGVQARIVDEETGEP 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 513 RVTNKpypQGEVLIGGECVSQGYYKLPGKTNEDFfEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEYVSLGKV 592
Cdd:cd05941 286 LPRGE---VGEIQVRGPSVFKEYWNKPEATKEEF-TDDG--WFKTGDLGVVDEDGYYWILGRSSVDIIKSGGYKVSALEI 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 593 ESELKTCGIIENICVYGDPTKQY---TVALVVPNqnhleelAQKHGLgdkSFEELCsspiiekailkeiaEHARKcKLQK 669
Cdd:cd05941 360 ERVLLAHPGVSECAVIGVPDPDWgerVVAVVVLR-------AGAAAL---SLEELK--------------EWAKQ-RLAP 414
|
410 420
....*....|....*....|..
gi 24586634 670 YEVPAAITLCKEVWSPDMGLVT 691
Cdd:cd05941 415 YKRPRRLILVDELPRNAMGKVN 436
|
|
| ACSBG_like |
cd05933 |
Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS); This family of very ... |
129-713 |
2.00e-38 |
|
Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS); This family of very long-chain fatty acid CoA synthetase is named bubblegum because Drosophila melanogaster mutant bubblegum (BGM) has elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene of this family. The human homolog (hsBG) has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. VL-FACS is involved in the first reaction step of very long chain fatty acid degradation. It catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.
Pssm-ID: 341256 [Multi-domain] Cd Length: 596 Bit Score: 150.97 E-value: 2.00e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 129 GDYKWKTFT-----EAERTAAnfgRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITE 203
Cdd:cd05933 2 RGDKWHTLTykeyyEACRQAA---KAFLKLGLERFHGVGILGFNSPEWFIAAVGAIFAGGIAVGIYTTNSPEACQYVAET 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 204 TEVTTVIT-SHDLLPKFKTLLDKCPLVKTIIYIEDQLQKTET-----TGFKEGVKILPFNQVvktgqDSKFEHVPPkgDD 277
Cdd:cd05933 79 SEANILVVeNQKQLQKILQIQDKLPHLKAIIQYKEPLKEKEPnlyswDEFMELGRSIPDEQL-----DAIISSQKP--NQ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 278 IAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDV----LIGFLPLAHVfelVAESVCLMTGVPIGYSTPL-- 351
Cdd:cd05933 152 CCTLIYTSGTTGMPKGVMLSHDNITWTAKAASQHMDLRPATVgqesVVSYLPLSHI---AAQILDIWLPIKVGGQVYFaq 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 352 ------TLIDTSSKIkrgckgdatvlKPTCMTSVPLILDRISKGINDKVNSGSAFKKSLFKF-----LYQYKvKWVQRGY 420
Cdd:cd05933 229 pdalkgTLVKTLREV-----------RPTAFMGVPRVWEKIQEKMKAVGAKSGTLKRKIASWakgvgLETNL-KLMGGES 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 421 KTP----LIDKLVFKKVAKLMG-GKVRIIMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATV---MDYRDMTYGR 492
Cdd:cd05933 297 PSPlfyrLAKKLVFKKVRKALGlDRCQKFFTGAAPISRETLEFFLS-LNIPIMELYGMSETSGPHTIsnpQAYRLLSCGK 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 493 TggpLTVCDIRLVNWE-EGnyrvtnkpypQGEVLIGGECVSQGYYKLPGKTNEDfFEEDGqrWFKTGDIGEIQADGVLKI 571
Cdd:cd05933 376 A---LPGCKTKIHNPDaDG----------IGEICFWGRHVFMGYLNMEDKTEEA-IDEDG--WLHSGDLGKLDEDGFLYI 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 572 IDRKKDLVKLQAGEYVSLGKVESELKT-CGIIENICVYGDPTKQYTVALVVPNQNHLE-------------ELAQKHGLG 637
Cdd:cd05933 440 TGRIKELIITAGGENVPPVPIEDAVKKeLPIISNAMLIGDKRKFLSMLLTLKCEVNPEtgepldelteeaiEFCRKLGSQ 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 638 DKSFEELCSSP------IIEKAIlKEIAEHA--RKCKLQKYEVpaaitLCKEvWSPDMGLVTAAFKLKRKDIQDRYQHDI 709
Cdd:cd05933 520 ATRVSEIAGGKdpkvyeAIEEGI-KRVNKKAisNAQKIQKWVI-----LEKD-FSVPGGELGPTMKLKRPVVAKKYKDEI 592
|
....
gi 24586634 710 NRMY 713
Cdd:cd05933 593 DKLY 596
|
|
| PRK08633 |
PRK08633 |
2-acyl-glycerophospho-ethanolamine acyltransferase; Validated |
218-645 |
3.09e-36 |
|
2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Pssm-ID: 236315 [Multi-domain] Cd Length: 1146 Bit Score: 146.99 E-value: 3.09e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 218 KFKTLLDKCPLVKTIIYIED---QLQKTETTGFKEGVKILPFNQVvktgqdSKFEHVPPKGDDIAIIMYTSGSTGTPKGV 294
Cdd:PRK08633 727 KNKGFDLELPENVKVIYLEDlkaKISKVDKLTALLAARLLPARLL------KRLYGPTFKPDDTATIIFSSGSEGEPKGV 800
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 295 LLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFEL-VAESVCLMTGVPIGYSTPLTLIDTSSKIKRgcKGDATVLkp 373
Cdd:PRK08633 801 MLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLtVTLWLPLLEGIKVVYHPDPTDALGIAKLVA--KHRATIL-- 876
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 374 tCMTSVplildriskgindkvnsgsafkkslfkFLYQYkvkwvqrgyktplidkLVFKKVAKLMGGKVRIIMSGGAPLSA 453
Cdd:PRK08633 877 -LGTPT---------------------------FLRLY----------------LRNKKLHPLMFASLRLVVAGAEKLKP 912
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 454 DTHEQIKTCLCLELIQGYGLTETTSGATVM--DYRDMTY--------GRTGGPLTVCDIRLVNWEegnyrvTNKPYPQGE 523
Cdd:PRK08633 913 EVADAFEEKFGIRILEGYGATETSPVASVNlpDVLAADFkrqtgskeGSVGMPLPGVAVRIVDPE------TFEELPPGE 986
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 524 ---VLIGGECVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVESELKTcg 600
Cdd:PRK08633 987 dglILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKI-GGEMVPLGAVEEELAK-- 1063
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 24586634 601 iienicVYGDPTKQYTVAlVVPNQNHLEELAQKHGLGDKSFEELC 645
Cdd:PRK08633 1064 ------ALGGEEVVFAVT-AVPDEKKGEKLVVLHTCGAEDVEELK 1101
|
|
| 4CL |
cd05904 |
4-Coumarate-CoA Ligase (4CL); 4-Coumarate:coenzyme A ligase is a key enzyme in the ... |
271-580 |
6.08e-36 |
|
4-Coumarate-CoA Ligase (4CL); 4-Coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids.
Pssm-ID: 341230 [Multi-domain] Cd Length: 505 Bit Score: 142.37 E-value: 6.08e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVP--IYPDDVLIGFLPLAHVFELvaeSVCLMTGVPIG-- 346
Cdd:cd05904 153 VVIKQDDVAALLYSSGTTGRSKGVMLTHRNLIAMVAQFVAGEGsnSDSEDVFLCVLPMFHIYGL---SSFALGLLRLGat 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 347 ------YSTPLTLidtsSKIKRgckgdatvLKPTCMTSVPLILDRISKGindkvnsgsafkkslfkflyqykvkwvqrgy 420
Cdd:cd05904 230 vvvmprFDLEELL----AAIER--------YKVTHLPVVPPIVLALVKS------------------------------- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 421 ktPLIDKLVFKKVaklmggkvRIIMSGGAPLSADTHEQIKTCLCL-ELIQGYGLTETTSGATVMDYRDMT---YGRTGGP 496
Cdd:cd05904 267 --PIVDKYDLSSL--------RQIMSGAAPLGKELIEAFRAKFPNvDLGQGYGMTESTGVVAMCFAPEKDrakYGSVGRL 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 497 LTVCDIRLVNWEegnyrvTNKPYP---QGEVLIGGECVSQGYYKLPGKTNEDFfeeDGQRWFKTGDIGEIQADGVLKIID 573
Cdd:cd05904 337 VPNVEAKIVDPE------TGESLPpnqTGELWIRGPSIMKGYLNNPEATAATI---DKEGWLHTGDLCYIDEDGYLFIVD 407
|
....*..
gi 24586634 574 RKKDLVK 580
Cdd:cd05904 408 RLKELIK 414
|
|
| AAS_C |
cd05909 |
C-terminal domain of the acyl-acyl carrier protein synthetase (also called ... |
191-636 |
1.28e-35 |
|
C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas); Acyl-acyl carrier protein synthase (Aas) is a membrane protein responsible for a minor pathway of incorporating exogenous fatty acids into membrane phospholipids. Its in vitro activity is characterized by the ligation of free fatty acids between 8 and 18 carbons in length to the acyl carrier protein sulfydryl group (ACP-SH) in the presence of ATP and Mg2+. However, its in vivo function is as a 2-acylglycerophosphoethanolamine (2-acyl-GPE) acyltransferase. The reaction occurs in two steps: the acyl chain is first esterified to acyl carrier protein (ACP) via a thioester bond, followed by a second step where the acyl chain is transferred to a 2-acyllysophospholipid, thus completing the transacylation reaction. This model represents the C-terminal domain of the enzyme, which belongs to the class I adenylate-forming enzyme family, including acyl-CoA synthetases.
Pssm-ID: 341235 [Multi-domain] Cd Length: 490 Bit Score: 141.31 E-value: 1.28e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 191 TLGDDGVAHCITETEVTTVITSHDLLPKFKtlLDKCPLVKT---IIYIEDQLqktETTGFKEGVKILPFNQVVKTGQDSK 267
Cdd:cd05909 64 TAGLRELRACIKLAGIKTVLTSKQFIEKLK--LHHLFDVEYdarIVYLEDLR---AKISKADKCKAFLAGKFPPKWLLRI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 268 FEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELvaeSVCLMtgvpigy 347
Cdd:cd05909 139 FGVAPVQPDDPAVILFTSGSEGLPKGVVLSHKNLLANVEQITAIFDPNPEDVVFGALPFFHSFGL---TGCLW------- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 348 sTPLTlidtsskikrgcKGDATVLKPTcmtsvPLILDRISKGINDKvnsGSAFKKSLFKFLYQYKVKWVQRGYKTplidk 427
Cdd:cd05909 209 -LPLL------------SGIKVVFHPN-----PLDYKKIPELIYDK---KATILLGTPTFLRGYARAAHPEDFSS----- 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 428 lvfkkvaklmggkVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATV----MDYRDMTYGRtggPLTVCDIR 503
Cdd:cd05909 263 -------------LRLVVAGAEKLKDTLRQEFQEKFGIRILEGYGTTECSPVISVntpqSPNKEGTVGR---PLPGMEVK 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 504 LVNWEegnyrvTNKPYPQGE---VLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVK 580
Cdd:cd05909 327 IVSVE------THEEVPIGEgglLLVRGPNVMLGYLNEPELTSFAF--GDG--WYDTGDIGKIDGEGFLTITGRLSRFAK 396
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24586634 581 LqAGEYVSLGKVESEL-KTCGIIENICVYGDPTKQYTVALVV------PNQNHLEELAQKHGL 636
Cdd:cd05909 397 I-AGEMVSLEAIEDILsEILPEDNEVAVVSVPDGRKGEKIVLlttttdTDPSSLNDILKNAGI 458
|
|
| OSB_CoA_lg |
cd05912 |
O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA ... |
273-699 |
2.45e-35 |
|
O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE); O-succinylbenzoic acid-CoA synthase catalyzes the coenzyme A (CoA)- and ATP-dependent conversion of o-succinylbenzoic acid to o-succinylbenzoyl-CoA. The reaction is the fourth step of the biosynthesis pathway of menaquinone (vitamin K2). In certain bacteria, menaquinone is used during fumarate reduction in anaerobic respiration. In cyanobacteria, the product of the menaquinone pathway is phylloquinone (2-methyl-3-phytyl-1,4-naphthoquinone), a molecule used exclusively as an electron transfer cofactor in Photosystem 1. In green sulfur bacteria and heliobacteria, menaquinones are used as loosely bound secondary electron acceptors in the photosynthetic reaction center.
Pssm-ID: 341238 [Multi-domain] Cd Length: 411 Bit Score: 138.63 E-value: 2.45e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 273 PKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELvaeSVcLMTGVPigYSTPLT 352
Cdd:cd05912 74 VKLDDIATIMYTSGTTGKPKGVQQTFGNHWWSAIGSALNLGLTEDDNWLCALPLFHISGL---SI-LMRSVI--YGMTVY 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 353 LIDtsskikrgcKGDAtvlkptcmtsvplilDRISKGIND-KVNSGSAFKKSLFKFLYQYkvkwvQRGYKTPLidklvfk 431
Cdd:cd05912 148 LVD---------KFDA---------------EQVLHLINSgKVTIISVVPTMLQRLLEIL-----GEGYPNNL------- 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 432 kvaklmggkvRIIMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATVMDYRDM--TYGRTGGPLTVCDIRLVNWEe 509
Cdd:cd05912 192 ----------RCILLGGGPAPKPLLEQCKE-KGIPVYQSYGMTETCSQIVTLSPEDAlnKIGSAGKPLFPVELKIEDDG- 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 510 gnyrvtNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSL 589
Cdd:cd05912 260 ------QPPYEVGEILLKGPNVTKGYLNRPDATEESF--ENG--WFKTGDIGYLDEEGFLYVLDRRSDLI-ISGGENIYP 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 590 GKVESELKTCGIIENICVYGDPTK---QYTVALVVpnqnhleelaqkhglgdksfeelCSSPIIEkailKEIAEHARKcK 666
Cdd:cd05912 329 AEIEEVLLSHPAIKEAGVVGIPDDkwgQVPVAFVV-----------------------SERPISE----EELIAYCSE-K 380
|
410 420 430
....*....|....*....|....*....|...
gi 24586634 667 LQKYEVPAAITLCKEVwsPDmglvTAAFKLKRK 699
Cdd:cd05912 381 LAKYKVPKKIYFVDEL--PR----TASGKLLRH 407
|
|
| FACL_fum10p_like |
cd05926 |
Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis; FACL ... |
272-699 |
3.27e-35 |
|
Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis; FACL catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Fum10p is a fatty acid CoA ligase involved in the synthesis of fumonisin, a polyketide mycotoxin, in Gibberella moniliformis.
Pssm-ID: 341249 [Multi-domain] Cd Length: 493 Bit Score: 140.14 E-value: 3.27e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 272 PPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAesVCLMTgvpigystpl 351
Cdd:cd05926 145 VPLPDDLALILHTSGTTGRPKGVPLTHRNLAASATNITNTYKLTPDDRTLVVMPLFHVHGLVA--SLLST---------- 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 352 tlidtsskikRGCKGdATVLKPTCmtsvplildriskgindkvnSGSAFkkslFKFLYQYKVKWVQrgyKTPLIDKLVFK 431
Cdd:cd05926 213 ----------LAAGG-SVVLPPRF--------------------SASTF----WPDVRDYNATWYT---AVPTIHQILLN 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 432 KVAKLMGG---KVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGAT-----VMDYRDMTYGRTGGPltvcDIR 503
Cdd:cd05926 255 RPEPNPESpppKLRFIRSCSASLPPAVLEALEATFGAPVLEAYGMTEAAHQMTsnplpPGPRKPGSVGKPVGV----EVR 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 504 LVNwEEGNyrvTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFFEEDgqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQA 583
Cdd:cd05926 331 ILD-EDGE---ILPPGVVGEICLRGPNVTRGYLNNPEANAEAAFKDG---WFRTGDLGYLDADGYLFLTGRIKELIN-RG 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 584 GEYVSLGKVESELKTCGIIENICVYGDPTKQY---TVALVVPNQNHleelaqkhglgdksfeelcsspiieKAILKEIAE 660
Cdd:cd05926 403 GEKISPLEVDGVLLSHPAVLEAVAFGVPDEKYgeeVAAAVVLREGA-------------------------SVTEEELRA 457
|
410 420 430
....*....|....*....|....*....|....*....
gi 24586634 661 HARKcKLQKYEVPaaitlcKEVWSPDMGLVTAAFKLKRK 699
Cdd:cd05926 458 FCRK-HLAAFKVP------KKVYFVDELPKTATGKIQRR 489
|
|
| AA-adenyl-dom |
TIGR01733 |
amino acid adenylation domain; This model represents a domain responsible for the specific ... |
271-607 |
4.74e-34 |
|
amino acid adenylation domain; This model represents a domain responsible for the specific recognition of amino acids and activation as adenylyl amino acids. The reaction catalyzed is aa + ATP -> aa-AMP + PPi. These domains are usually found as components of multi-domain non-ribosomal peptide synthetases and are usually called "A-domains" in that context. A-domains are almost invariably followed by "T-domains" (thiolation domains, pfam00550) to which the amino acid adenylate is transferred as a thiol-ester to a bound pantetheine cofactor with the release of AMP (these are also called peptide carrier proteins, or PCPs. When the A-domain does not represent the first module (corresponding to the first amino acid in the product molecule) it is usually preceded by a "C-domain" (condensation domain, pfam00668) which catalyzes the ligation of two amino acid thiol-esters from neighboring modules. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Pssm-ID: 273779 [Multi-domain] Cd Length: 409 Bit Score: 135.09 E-value: 4.74e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAH---VFELVAesvCLMTGvpigy 347
Cdd:TIGR01733 115 APSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFdasVEEIFG---ALLAG----- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 348 STPLTLIDTSSKIKRGCKGDAT-VLKPTCMTSVPLILDRISKGINDKVNSgsafkkslfkflyqykvkwvqrgyktplid 426
Cdd:TIGR01733 187 ATLVVPPEDEERDDAALLAALIaEHPVTVLNLTPSLLALLAAALPPALAS------------------------------ 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 427 klvfkkvaklmggkVRIIMSGGAPLSADTHEQIK-TCLCLELIQGYGLTETTSGATVMDY--------RDMTYGRtggPL 497
Cdd:TIGR01733 237 --------------LRLVILGGEALTPALVDRWRaRGPGARLINLYGPTETTVWSTATLVdpddapreSPVPIGR---PL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 TVCDIRLVNwEEGNyrvtnkPYP---QGEVLIGGECVSQGYYKLPGKTNEDFFE-----EDGQRWFKTGDIGEIQADGVL 569
Cdd:TIGR01733 300 ANTRLYVLD-DDLR------PVPvgvVGELYIGGPGVARGYLNRPELTAERFVPdpfagGDGARLYRTGDLVRYLPDGNL 372
|
330 340 350
....*....|....*....|....*....|....*...
gi 24586634 570 KIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICV 607
Cdd:TIGR01733 373 EFLGRIDDQVKIR-GYRIELGEIEAALLRHPGVREAVV 409
|
|
| PRK05605 |
PRK05605 |
long-chain-fatty-acid--CoA ligase; Validated |
253-704 |
7.48e-33 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 235531 [Multi-domain] Cd Length: 573 Bit Score: 133.97 E-value: 7.48e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 253 ILPFNQVVKT---GQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDD--VLIGFLPLA 327
Cdd:PRK05605 193 TVPWETLVDAaigGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGpeRVLAALPMF 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 328 HVFELvaeSVCLMTGVPIGystpltlidtsSKIkrgckgdatVLKPTcmTSVPLILDriskgindkvnsgsAFKKSLFKF 407
Cdd:PRK05605 273 HAYGL---TLCLTLAVSIG-----------GEL---------VLLPA--PDIDLILD--------------AMKKHPPTW 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 408 LYQYKvkwvqrgyktPLIDKLVfkKVAK-----LMGgkVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETT---SG 479
Cdd:PRK05605 314 LPGVP----------PLYEKIA--EAAEergvdLSG--VRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSpiiVG 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 480 ATVMDYRDMTYgrTGGPLTVCDIRLVNWEegNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTnEDFFEEDgqrWFKTGD 559
Cdd:PRK05605 380 NPMSDDRRPGY--VGVPFPDTEVRIVDPE--DPDETMPDGEEGELLVRGPQVFKGYWNRPEET-AKSFLDG---WFRTGD 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 560 IGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVpnqnhLEELAqkhgl 636
Cdd:PRK05605 452 VVVMEEDGFIRIVDRIKELI-ITGGFNVYPAEVEEVLREHPGVEDAAVVGLPREdgsEEVVAAVV-----LEPGA----- 520
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 637 gdksfeelcsspIIEKAILKeiaEHARKcKLQKYEVPAAITLCKEVWSPDMGlvtaafKLKRKDIQDR 704
Cdd:PRK05605 521 ------------ALDPEGLR---AYCRE-HLTRYKVPRRFYHVDELPRDQLG------KVRRREVREE 566
|
|
| PRK07514 |
PRK07514 |
malonyl-CoA synthase; Validated |
263-622 |
2.27e-31 |
|
malonyl-CoA synthase; Validated
Pssm-ID: 181011 [Multi-domain] Cd Length: 504 Bit Score: 128.84 E-value: 2.27e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 263 GQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFEL-VAESVCLMT 341
Cdd:PRK07514 143 AAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLfVATNVALLA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 342 GVPIGYstpLTLIDTSSKIKRgcKGDATVlkptcMTSVPLILDRIskgindkvnsgsafkkslfkflyqykvkwvqrgyk 421
Cdd:PRK07514 223 GASMIF---LPKFDPDAVLAL--MPRATV-----MMGVPTFYTRL----------------------------------- 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 422 tpLIDKLVFKKVAKLMggkvRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTET---TS--------GATVmdyrdmty 490
Cdd:PRK07514 258 --LQEPRLTREAAAHM----RLFISGSAPLLAETHREFQERTGHAILERYGMTETnmnTSnpydgerrAGTV-------- 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 491 grtGGPLTVCDIRLVNWEEGnyrvtnKPYPQGEvlIG-----GECVSQGYYKLPGKTNEDFfEEDGqrWFKTGDIGEIQA 565
Cdd:PRK07514 324 ---GFPLPGVSLRVTDPETG------AELPPGE--IGmievkGPNVFKGYWRMPEKTAEEF-RADG--FFITGDLGKIDE 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24586634 566 DGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTC-GIIENiCVYGDPTKQY---TVALVVP 622
Cdd:PRK07514 390 RGYVHIVGRGKDLI-ISGGYNVYPKEVEGEIDELpGVVES-AVIGVPHPDFgegVTAVVVP 448
|
|
| LC_FACS_like |
cd05935 |
Putative long-chain fatty acid CoA ligase; The members of this family are putative long-chain ... |
276-611 |
1.42e-30 |
|
Putative long-chain fatty acid CoA ligase; The members of this family are putative long-chain fatty acyl-CoA synthetases, which catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters.
Pssm-ID: 341258 [Multi-domain] Cd Length: 430 Bit Score: 125.28 E-value: 1.42e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAEsvcLMTGVPIGystpltlid 355
Cdd:cd05935 84 DDLALIPYTSGTTGLPKGCMHTHFSAAANALQSAVWTGLTPSDVILACLPLFHVTGFVGS---LNTAVYVG--------- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 356 tsskikrgckgdATVLkptcmtsvplildriSKGINDKVNSGSAFKKslfkflyqYKVK-WVqrGYKTPLIDKLVFKKVA 434
Cdd:cd05935 152 ------------GTYV---------------LMARWDRETALELIEK--------YKVTfWT--NIPTMLVDLLATPEFK 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 435 KLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRV 514
Cdd:cd05935 195 TRDLSSLKVLTGGGAPMPPAVAEKLLKLTGLRFVEGYGLTETMSQTHTNPPLRPKLQCLGIP*FGVDARVIDIETGRELP 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 515 TNKpypQGEVLIGGECVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVES 594
Cdd:cd05935 275 PNE---VGEIVVRGPQIFKGYWNRPEETEESFIEIKGRRFFRTGDLGYMDEEGYFFFVDRVKRMINV-SGFKVWPAEVEA 350
|
330
....*....|....*..
gi 24586634 595 ELKTCGIIENICVYGDP 611
Cdd:cd05935 351 KLYKHPAI*EVCVISVP 367
|
|
| FACL_FadD13-like |
cd17631 |
fatty acyl-CoA synthetase, including FadD13; This family contains fatty acyl-CoA synthetases, ... |
276-624 |
1.48e-30 |
|
fatty acyl-CoA synthetase, including FadD13; This family contains fatty acyl-CoA synthetases, including Mycobacterium tuberculosis acid-induced operon MymA encoding the fatty acyl-CoA synthetase FadD13 which is essential for virulence and intracellular growth of the pathogen. The fatty acyl-CoA synthetase activates lipids before entering into the metabolic pathways and is also involved in transmembrane lipid transport. However, unlike soluble fatty acyl-CoA synthetases, but like the mammalian integral-membrane very-long-chain acyl-CoA synthetases, FadD13 accepts lipid substrates up to the maximum length of C26, and this is facilitated by an extensive hydrophobic tunnel from the active site to a positively charged patch. Also included is feruloyl-CoA synthetase (Fcs) in Rhodococcus strains where it is involved in biotechnological vanillin production from eugenol and ferulic acid via a non-beta-oxidative pathway.
Pssm-ID: 341286 [Multi-domain] Cd Length: 435 Bit Score: 125.03 E-value: 1.48e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIA-TMKGFVDMvPIYPDDVLIGFLPLAHVFELvaesvclmtGVPIGystPLTLI 354
Cdd:cd17631 98 DDLALLMYTSGTTGRPKGAMLTHRNLLWnAVNALAAL-DLGPDDVLLVVAPLFHIGGL---------GVFTL---PTLLR 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 DTSSKIKRGCKGDAtvlkptcmtsvplILDRISKGindKVNSGSAFKkSLFKFLYQykvkwvqrgykTPLIDKLVFKKVa 434
Cdd:cd17631 165 GGTVVILRKFDPET-------------VLDLIERH---RVTSFFLVP-TMIQALLQ-----------HPRFATTDLSSL- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 435 klmggkvRIIMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATVMDYRDM--TYGRTGGPLTVCDIRLVNwEEGNy 512
Cdd:cd17631 216 -------RAVIYGGAPMPERLLRALQA-RGVKFVQGYGMTETSPGVTFLSPEDHrrKLGSAGRPVFFVEVRIVD-PDGR- 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 513 rvTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKV 592
Cdd:cd17631 286 --EVPPGEVGEIVVRGPHVMAGYWNRPEATAAAF--RDG--WFHTGDLGRLDEDGYLYIVDRKKDMII-SGGENVYPAEV 358
|
330 340 350
....*....|....*....|....*....|....*
gi 24586634 593 ESELKTCGIIENICVYGDPTKQY---TVALVVPNQ 624
Cdd:cd17631 359 EDVLYEHPAVAEVAVIGVPDEKWgeaVVAVVVPRP 393
|
|
| menE |
TIGR01923 |
O-succinylbenzoate-CoA ligase; This model represents an enzyme, O-succinylbenzoate-CoA ligase, ... |
275-678 |
1.26e-29 |
|
O-succinylbenzoate-CoA ligase; This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 162605 [Multi-domain] Cd Length: 436 Bit Score: 122.56 E-value: 1.26e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGvpigysTPLTLI 354
Cdd:TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEG------ATLRIV 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 DtsskikrgckGDATVLkpTCMTsvplildriskgiNDKVNSGSAFKKSLFKFLYQykvkwvqRGYKTPLidklvfkkva 434
Cdd:TIGR01923 184 D----------KFNQLL--EMIA-------------NERVTHISLVPTQLNRLLDE-------GGHNENL---------- 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 435 klmggkvRIIMSGGAPLSAdthEQIKTCLC--LELIQGYGLTETTSGATVMDyRDMTYGRT--GGPLTVCDIRLvnweeg 510
Cdd:TIGR01923 222 -------RKILLGGSAIPA---PLIEEAQQygLPIYLSYGMTETCSQVTTAT-PEMLHARPdvGRPLAGREIKI------ 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 511 nyRVTNKPyPQGEVLIGGECVSQGYYKlPGKTNEDFFEedgQRWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLG 590
Cdd:TIGR01923 285 --KVDNKE-GHGEIMVKGANLMKGYLY-QGELTPAFEQ---QGWFNTGDIGELDGEGFLYVLGRRDDLI-ISGGENIYPE 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 591 KVESELKTCGIIENICVYGDPTKQY---TVALVVPNQnhleelaqkhglgdksfeELCSSPIIekAILKEiaeharkcKL 667
Cdd:TIGR01923 357 EIETVLYQHPGIQEAVVVPKPDAEWgqvPVAYIVSES------------------DISQAKLI--AYLTE--------KL 408
|
410
....*....|.
gi 24586634 668 QKYEVPAAITL 678
Cdd:TIGR01923 409 AKYKVPIAFEK 419
|
|
| PRK05677 |
PRK05677 |
long-chain-fatty-acid--CoA ligase; Validated |
252-579 |
1.69e-29 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 168170 [Multi-domain] Cd Length: 562 Bit Score: 123.72 E-value: 1.69e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 252 KILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDD---VLIGFLPLAH 328
Cdd:PRK05677 183 QAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEgceILIAPLPLYH 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 329 VFELVAESVCLMtgvpigystpltLIdtsskikrgckGDATVLKPTcmtsvPLILDriskgindkvnsgsAFKKSLFKFL 408
Cdd:PRK05677 263 IYAFTFHCMAMM------------LI-----------GNHNILISN-----PRDLP--------------AMVKELGKWK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 409 YQYKVkwvqrGYKTPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDM 488
Cdd:PRK05677 301 FSGFV-----GLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQAI 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 489 TYGRTGGPLTVCDIRLVNwEEGNYRVTNKPypqGEVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGEIQADGV 568
Cdd:PRK05677 376 QVGTIGIPVPSTLCKVID-DDGNELPLGEV---GELCVKGPQVMKGYWQRPEATDE-ILDSDG--WLKTGDIALIQEDGY 448
|
330
....*....|.
gi 24586634 569 LKIIDRKKDLV 579
Cdd:PRK05677 449 MRIVDRKKDMI 459
|
|
| A_NRPS |
cd05930 |
The adenylation domain of nonribosomal peptide synthetases (NRPS); The adenylation (A) domain ... |
275-624 |
1.86e-29 |
|
The adenylation domain of nonribosomal peptide synthetases (NRPS); The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341253 [Multi-domain] Cd Length: 444 Bit Score: 121.87 E-value: 1.86e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLA---HVFELVAesvCLMTG---VPIGYS 348
Cdd:cd05930 92 PDDLAYVIYTSGSTGKPKGVMVEHRGLVNLLLWMQEAYPLTPGDRVLQFTSFSfdvSVWEIFG---ALLAGatlVVLPEE 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 349 T---PLTLIDTsskIKRGckgdatvlKPTCMTSVPlildriskgindkvnsgsafkkSLFKFLYQYkvkwvqrgyktpli 425
Cdd:cd05930 169 VrkdPEALADL---LAEE--------GITVLHLTP----------------------SLLRLLLQE-------------- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 426 dklvfkkVAKLMGGKVRIIMSGGAPLSADTHEQI-KTCLCLELIQGYGLTETTSGATVM--DYRDMTYGRT--GGPLTVC 500
Cdd:cd05930 202 -------LELAALPSLRLVLVGGEALPPDLVRRWrELLPGARLVNLYGPTEATVDATYYrvPPDDEEDGRVpiGRPIPNT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 501 DIRLVNwEEGNyrvtnkPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFFE---EDGQRWFKTGDIGEIQADGVLKIIDR 574
Cdd:cd05930 275 RVYVLD-ENLR------PVPPgvpGELYIGGAGLARGYLNRPELTAERFVPnpfGPGERMYRTGDLVRWLPDGNLEFLGR 347
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 24586634 575 KKDLVKLqAGEYVSLGKVESELKTC-GIIENICV-YGDPTK-QYTVALVVPNQ 624
Cdd:cd05930 348 IDDQVKI-RGYRIELGEIEAALLAHpGVREAAVVaREDGDGeKRLVAYVVPDE 399
|
|
| DltA |
cd05945 |
D-alanine:D-alanyl carrier protein ligase (DltA) and similar proteins; This family includes ... |
275-623 |
2.53e-29 |
|
D-alanine:D-alanyl carrier protein ligase (DltA) and similar proteins; This family includes D-alanyl carrier protein ligase DltA and aliphatic beta-amino acid adenylation enzymes IdnL1 and CmiS6. DltA incorporates D-ala in techoic acids in gram-positive bacteria via a two-step process, starting with adenylation of D-alanine that transfers D-alanine to the D-alanyl carrier protein. IdnL1, a short-chain aliphatic beta-amino acid adenylation enzyme, recognizes 3-aminobutanoic acid, and is involved in the synthesis of the macrolactam antibiotic incednine. CmiS6 is a medium-chain beta-amino acid adenylation enzyme that recognizes 3-aminononanoic acid, and is involved in the synthesis of cremimycin, also a macrolactam antibiotic. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341267 [Multi-domain] Cd Length: 449 Bit Score: 121.59 E-value: 2.53e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELvaeSV-----CLMTGvpigyst 349
Cdd:cd05945 96 GDDNAYIIFTSGSTGRPKGVQISHDNLVSFTNWMLSDFPLGPGDVFLNQAPFS--FDL---SVmdlypALASG------- 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 350 pltlidtsskikrgckgdATVlkptcmtsVPLILDRIskgindkvnsgsAFKKSLFKFLYQYKVK-WVQrgykTP-LIDK 427
Cdd:cd05945 164 ------------------ATL--------VPVPRDAT------------ADPKQLFRFLAEHGITvWVS----TPsFAAM 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 428 -LVFKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCL-ELIQGYGLTETTSGATVMDYRD---MTYGR--TGGPLTVC 500
Cdd:cd05945 202 cLLSPTFTPESLPSLRHFLFCGEVLPHKTARALQQRFPDaRIYNTYGPTEATVAVTYIEVTPevlDGYDRlpIGYAKPGA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 501 DIRLVNwEEGnyrVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVK 580
Cdd:cd05945 282 KLVILD-EDG---RPVPPGEKGELVISGPSVSKGYLNNPEKTAAAFFPDEGQRAYRTGDLVRLEADGLLFYRGRLDFQVK 357
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 24586634 581 LQaGEYVSLGKVESELKTCGIIENICV---YGDPTKQYTVALVVPN 623
Cdd:cd05945 358 LN-GYRIELEEIEAALRQVPGVKEAVVvpkYKGEKVTELIAFVVPK 402
|
|
| Firefly_Luc |
cd17642 |
insect luciferase, similar to plant 4-coumarate: CoA ligases; This family contains insect ... |
135-611 |
1.27e-27 |
|
insect luciferase, similar to plant 4-coumarate: CoA ligases; This family contains insect firefly luciferases that share significant sequence similarity to plant 4-coumarate:coenzyme A ligases, despite their functional diversity. Luciferase catalyzes the production of light in the presence of MgATP, molecular oxygen, and luciferin. In the first step, luciferin is activated by acylation of its carboxylate group with ATP, resulting in an enzyme-bound luciferyl adenylate. In the second step, luciferyl adenylate reacts with molecular oxygen, producing an enzyme-bound excited state product (Luc=O*) and releasing AMP. This excited-state product then decays to the ground state (Luc=O), emitting a quantum of visible light.
Pssm-ID: 341297 [Multi-domain] Cd Length: 532 Bit Score: 117.63 E-value: 1.27e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHD 214
Cdd:cd17642 46 SYAEYLEMSVRLAEALKKYGLKQNDRIAVCSENSLQFFLPVIAGLFIGVGVAPTNDIYNERELDHSLNISKPTIVFCSKK 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 215 LLPKFKTLLDKCPLVKTIIY---IEDQLQKTETTGFKEGVKILPFNQvvktgqdSKFehVPP---KGDDIAIIMYTSGST 288
Cdd:cd17642 126 GLQKVLNVQKKLKIIKTIIIldsKEDYKGYQCLYTFITQNLPPGFNE-------YDF--KPPsfdRDEQVALIMNSSGST 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 289 GTPKGVLLSHKNCIATMKGFVDmvPIY-----PDDVLIGFLPLAHVFElvaesvCLMTgvpIGYStpltlidtsskikrg 363
Cdd:cd17642 197 GLPKGVQLTHKNIVARFSHARD--PIFgnqiiPDTAILTVIPFHHGFG------MFTT---LGYL--------------- 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 364 CKGDATVLKPTCMTSVPLildrisKGIND-KVNSgSAFKKSLFKFLYqykvkwvqrgyKTPLIDKLvfkKVAKLMggkvr 442
Cdd:cd17642 251 ICGFRVVLMYKFEEELFL------RSLQDyKVQS-ALLVPTLFAFFA-----------KSTLVDKY---DLSNLH----- 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 443 IIMSGGAPLSADTHEQIKTCLCLELI-QGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRVTNKpypQ 521
Cdd:cd17642 305 EIASGGAPLSKEVGEAVAKRFKLPGIrQGYGLTETTSAILITPEGDDKPGAVGKVVPFFYAKVVDLDTGKTLGPNE---R 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 522 GEVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGI 601
Cdd:cd17642 382 GELCVKGPMIMKGYVNNPEATKA-LIDKDG--WLHSGDIAYYDEDGHFFIVDRLKSLIKYK-GYQVPPAELESILLQHPK 457
|
490
....*....|
gi 24586634 602 IENICVYGDP 611
Cdd:cd17642 458 IFDAGVAGIP 467
|
|
| OSB_MenE-like |
cd17630 |
O-succinylbenzoic acid-CoA ligase; This family contains O-succinylbenzoyl-CoA (OSB-CoA) ... |
277-632 |
4.41e-27 |
|
O-succinylbenzoic acid-CoA ligase; This family contains O-succinylbenzoyl-CoA (OSB-CoA) synthetase (also known as O-succinylbenzoic acid CoA ligase) that belongs to the ANL superfamily and catalyzes the ligation of CoA to o-succinylbenzoate (OSB). It includes MenE in the bacterial menaquinone biosynthesis pathway which is a promising target for the development of novel antibacterial agents. MenE catalyzes CoA ligation via an acyl-adenylate intermediate; tight-binding inhibitors of MenE based on stable acyl-sulfonyladenosine analogs of this intermediate provide a pathway toward the development of optimized MenE inhibitors.
Pssm-ID: 341285 [Multi-domain] Cd Length: 325 Bit Score: 112.42 E-value: 4.41e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHV---FELVAesvCLMTGvpigysTPLTL 353
Cdd:cd17630 1 RLATVILTSGSTGTPKAVVHTAANLLASAAGLHSRLGFGGGDSWLLSLPLYHVgglAILVR---SLLAG------AELVL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 354 IDTsskiKRGCKGDATVLKPTCMTSVPLILDRIskgindkvnsgsafkkslfkflyqykvkwvqrgyktpLIDKLVFKKV 433
Cdd:cd17630 72 LER----NQALAEDLAPPGVTHVSLVPTQLQRL-------------------------------------LDSGQGPAAL 110
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 434 AKLmggkvRIIMSGGAPLSADTHEQIkTCLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNweegnyr 513
Cdd:cd17630 111 KSL-----RAVLLGGAPIPPELLERA-ADRGIPLYTTYGMTETASQVATKRPDGFGRGGVGVLLPGRELRIVE------- 177
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 514 vtnkpypQGEVLIGGECVSQGYYKlpGKTNEDFFEEDgqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVE 593
Cdd:cd17630 178 -------DGEIWVGGASLAMGYLR--GQLVPEFNEDG---WFTTKDLGELHADGRLTVLGRADNMI-ISGGENIQPEEIE 244
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 24586634 594 SELKTCGIIENICVYGDPTKQY---TVALVVPNQNHL-EELAQ 632
Cdd:cd17630 245 AALAAHPAVRDAFVVGVPDEELgqrPVAVIVGRGPADpAELRA 287
|
|
| PRK12492 |
PRK12492 |
long-chain-fatty-acid--CoA ligase; Provisional |
254-579 |
5.48e-27 |
|
long-chain-fatty-acid--CoA ligase; Provisional
Pssm-ID: 171539 [Multi-domain] Cd Length: 562 Bit Score: 116.07 E-value: 5.48e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 254 LPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATM-KGFVDMVPIYPD---------DVLIGF 323
Cdd:PRK12492 185 VPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMlQVRACLSQLGPDgqplmkegqEVMIAP 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 324 LPLAHVFELVAESVCLMTgvpigystpltlidtsskikrgcKGDATVLkptcmtsvplildriskgINDKVNSGsAFKKS 403
Cdd:PRK12492 265 LPLYHIYAFTANCMCMMV-----------------------SGNHNVL------------------ITNPRDIP-GFIKE 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 404 LFKFLYQYKVkwvqrGYKT---PLIDKLVFKKvakLMGGKVRIIMSGGAPL---SADTHEQIKTClclELIQGYGLTETT 477
Cdd:PRK12492 303 LGKWRFSALL-----GLNTlfvALMDHPGFKD---LDFSALKLTNSGGTALvkaTAERWEQLTGC---TIVEGYGLTETS 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 478 SGATVMDYRDMT-YGRTGGPLTVCDIRLVNwEEGNYRVTNKpypQGEVLIGGECVSQGYYKLPGKTNEDFfeeDGQRWFK 556
Cdd:PRK12492 372 PVASTNPYGELArLGTVGIPVPGTALKVID-DDGNELPLGE---RGELCIKGPQVMKGYWQQPEATAEAL---DAEGWFK 444
|
330 340
....*....|....*....|...
gi 24586634 557 TGDIGEIQADGVLKIIDRKKDLV 579
Cdd:PRK12492 445 TGDIAVIDPDGFVRIVDRKKDLI 467
|
|
| PRK03640 |
PRK03640 |
o-succinylbenzoate--CoA ligase; |
276-699 |
7.22e-27 |
|
o-succinylbenzoate--CoA ligase;
Pssm-ID: 235146 [Multi-domain] Cd Length: 483 Bit Score: 114.67 E-value: 7.22e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAesvcLMTGVpIgYSTPLTLID 355
Cdd:PRK03640 141 DEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSI----LMRSV-I-YGMRVVLVE 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 356 T--SSKIKRGCKGDatvlKPTCMTSVPLILDRIskgindkvnsgsafkkslfkflyqykvkwvqrgyktplidklvfkkV 433
Cdd:PRK03640 215 KfdAEKINKLLQTG----GVTIISVVSTMLQRL----------------------------------------------L 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 434 AKLMGG----KVRIIMSGGAPLSADTHEQiktclCLE----LIQGYGLTETTSGATVMDYRDM--TYGRTGGPLTVCDIR 503
Cdd:PRK03640 245 ERLGEGtypsSFRCMLLGGGPAPKPLLEQ-----CKEkgipVYQSYGMTETASQIVTLSPEDAltKLGSAGKPLFPCELK 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 504 LVnwEEGNyrvTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQA 583
Cdd:PRK03640 320 IE--KDGV---VVPPFEEGEIVVKGPNVTKGYLNREDATRETF--QDG--WFKTGDIGYLDEEGFLYVLDRRSDLI-ISG 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 584 GEYVSLGKVESELKTCGIIENICVYGDPTKQY---TVALVVpnqnhleelaqkhglgdksfeelCSSPIIEkailKEIAE 660
Cdd:PRK03640 390 GENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWgqvPVAFVV-----------------------KSGEVTE----EELRH 442
|
410 420 430
....*....|....*....|....*....|....*....
gi 24586634 661 HARKcKLQKYEVPAAITLCKEVwsPDmglvTAAFKLKRK 699
Cdd:PRK03640 443 FCEE-KLAKYKVPKRFYFVEEL--PR----NASGKLLRH 474
|
|
| A_NRPS_TubE_like |
cd05906 |
The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) ... |
138-579 |
2.32e-26 |
|
The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents; The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPSs that synthesize toxins and antitumor agents; for example, TubE for Tubulysine, CrpA for cryptophycin, TdiA for terrequinone A, KtzG for kutzneride, and Vlm1/Vlm2 for Valinomycin. Nonribosomal peptide synthetases are large multifunctional enzymes which synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341232 [Multi-domain] Cd Length: 540 Bit Score: 113.92 E-value: 2.32e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 138 EAERTAAnfgrGLRELGQKPRENIVIFAETRAEWMIAAHGCF-KQAMP-IVTVYAT--LGDDGVAHcitetevttvitsh 213
Cdd:cd05906 48 DARRLAA----GLRQLGLRPGDSVILQFDDNEDFIPAFWACVlAGFVPaPLTVPPTydEPNARLRK-------------- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 214 dlLPKFKTLLDKcPLVKTIIYIEDQLQKTETTGFKEGVKILPFNQVVKTGQDSkfeHVPPK-GDDIAIIMYTSGSTGTPK 292
Cdd:cd05906 110 --LRHIWQLLGS-PVVLTDAELVAEFAGLETLSGLPGIRVLSIEELLDTAADH---DLPQSrPDDLALLMLTSGSTGFPK 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 293 GVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESV------CLMTGVPIGY--STPLTLIDTSSKIKrgc 364
Cdd:cd05906 184 AVPLTHRNILARSAGKIQHNGLTPQDVFLNWVPLDHVGGLVELHLravylgCQQVHVPTEEilADPLRWLDLIDRYR--- 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 365 kgdATVlkpTCMTSVPLILdriskgINDKVNSGSAFKKSLfkflyqykvkwvqrgyktplidklvfkkvaklmgGKVRII 444
Cdd:cd05906 261 ---VTI---TWAPNFAFAL------LNDLLEEIEDGTWDL----------------------------------SSLRYL 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 445 MSGGAPLSADTHEQIktclcLELIQ-----------GYGLTETTSGATVmDYRDMTYGRT--------GGPLTVCDIRLV 505
Cdd:cd05906 295 VNAGEAVVAKTIRRL-----LRLLEpyglppdairpAFGMTETCSGVIY-SRSFPTYDHSqalefvslGRPIPGVSMRIV 368
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 506 nweegnyRVTNKPYPQGEV---LIGGECVSQGYYKLPgKTNEDFFEEDGqrWFKTGDIGEIQaDGVLKIIDRKKDLV 579
Cdd:cd05906 369 -------DDEGQLLPEGEVgrlQVRGPVVTKGYYNNP-EANAEAFTEDG--WFRTGDLGFLD-NGNLTITGRTKDTI 434
|
|
| A_NRPS_SidN3_like |
cd05918 |
The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS); ... |
276-676 |
6.83e-26 |
|
The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS); The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family of siderophore-synthesizing NRPS includes the third adenylation domain of SidN from the endophytic fungus Neotyphodium lolii, ferrichrome siderophore synthetase, HC-toxin synthetase, and enniatin synthase. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341242 [Multi-domain] Cd Length: 481 Bit Score: 111.87 E-value: 6.83e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLplAHVFEL-VAESVC-LMTGvpigystpltl 353
Cdd:cd05918 106 SDAAYVIFTSGSTGKPKGVVIEHRALSTSALAHGRALGLTSESRVLQFA--SYTFDVsILEIFTtLAAG----------- 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 354 idtsskikrGCkgdatvlkpTCMTSVpliLDRIskgiNDkvnsgsafkksLFKFLYQYKVKWVQRgykTPlidklvfkKV 433
Cdd:cd05918 173 ---------GC---------LCIPSE---EDRL----ND-----------LAGFINRLRVTWAFL---TP--------SV 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 434 AKLMGGK----VRIIMSGGAPLsadTHEQIKT-CLCLELIQGYGLTETTSGATV-MDYRDMTYGRTGGPLTVCdIRLVNw 507
Cdd:cd05918 206 ARLLDPEdvpsLRTLVLGGEAL---TQSDVDTwADRVRLINAYGPAECTIAATVsPVVPSTDPRNIGRPLGAT-CWVVD- 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 508 eEGNYrvtNKPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFFE----------EDGQRWFKTGDIGEIQADGVLKIIDR 574
Cdd:cd05918 281 -PDNH---DRLVPIgavGELLIEGPILARGYLNDPEKTAAAFIEdpawlkqegsGRGRRLYRTGDLVRYNPDGSLEYVGR 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 575 KKDLVKLQaGEYVSLGKVESELKTC-GIIENICVY-----GDPTKQYTVALVVPNQNHLEelaqkHGLGDKSFEELCSSP 648
Cdd:cd05918 357 KDTQVKIR-GQRVELGEIEHHLRQSlPGAKEVVVEvvkpkDGSSSPQLVAFVVLDGSSSG-----SGDGDSLFLEPSDEF 430
|
410 420
....*....|....*....|....*...
gi 24586634 649 iieKAILKEIAEHARKCkLQKYEVPAAI 676
Cdd:cd05918 431 ---RALVAELRSKLRQR-LPSYMVPSVF 454
|
|
| EntF |
COG1020 |
EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites ... |
250-634 |
1.17e-25 |
|
EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440643 [Multi-domain] Cd Length: 1329 Bit Score: 113.80 E-value: 1.17e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 250 GVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAH- 328
Cdd:COG1020 591 GVPVLALDALALAAEPATNPPVPVTPDDLAYVIYTSGSTGRPKGVMVEHRALVNLLAWMQRRYGLGPGDRVLQFASLSFd 670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 329 --VFELVAesvCLMTG---VPIGYSTPLTLIDTSSKIKRGckgdatvlKPTCMTSVPlildriskgindkvnsgsafkkS 403
Cdd:COG1020 671 asVWEIFG---ALLSGatlVLAPPEARRDPAALAELLARH--------RVTVLNLTP----------------------S 717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 404 LFKflyqykvkwvqrgyktPLIDklvfkkVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLC-LELIQGYGLTETTSGATV 482
Cdd:COG1020 718 LLR----------------ALLD------AAPEALPSLRLVLVGGEALPPELVRRWRARLPgARLVNLYGPTETTVDSTY 775
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 483 MDYRD-------MTYGRtggPLTVCDIRLVNwEEGNyrvtnkPYPQ---GEVLIGGECVSQGYYKLPGKTNEDF----FE 548
Cdd:COG1020 776 YEVTPpdadggsVPIGR---PIANTRVYVLD-AHLQ------PVPVgvpGELYIGGAGLARGYLNRPELTAERFvadpFG 845
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 549 EDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTC-GIIENI-CVYGD-PTKQYTVALVVPNQN 625
Cdd:COG1020 846 FPGARLYRTGDLARWLPDGNLEFLGRADDQVKIR-GFRIELGEIEAALLQHpGVREAVvVAREDaPGDKRLVAYVVPEAG 924
|
....*....
gi 24586634 626 HLEELAQKH 634
Cdd:COG1020 925 AAAAAALLR 933
|
|
| Acs |
COG0365 |
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism]; |
135-676 |
1.33e-25 |
|
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism];
Pssm-ID: 440134 [Multi-domain] Cd Length: 565 Bit Score: 111.74 E-value: 1.33e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAH-----------CITE 203
Cdd:COG0365 41 TYAELRREVNRFANALRALGVKKGDRVAIYLPNIPEAVIAMLACARIGAVHSPVFPGFGAEALADriedaeakvliTADG 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 204 TEVTTVItsHDLLPKFKTLLDKCPLVKTIIYIEDQLQKTETTGFkegvkiLPFNQVVKtGQDSKFEHVPPKGDDIAIIMY 283
Cdd:COG0365 121 GLRGGKV--IDLKEKVDEALEELPSLEHVIVVGRTGADVPMEGD------LDWDELLA-AASAEFEPEPTDADDPLFILY 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 284 TSGSTGTPKGVLLSHK----NCIATMKGFVDMVpiyPDDVL-----IGFL---------PLAHvfelvAESVCLMTGVPI 345
Cdd:COG0365 192 TSGTTGKPKGVVHTHGgylvHAATTAKYVLDLK---PGDVFwctadIGWAtghsyivygPLLN-----GATVVLYEGRPD 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 346 gYSTPLTLIDTSSKikrgckgdatvLKPTCMTSVPLILdriskgindkvnsgSAFKKSLFKFLYQYKVKwvqrgyktpli 425
Cdd:COG0365 264 -FPDPGRLWELIEK-----------YGVTVFFTAPTAI--------------RALMKAGDEPLKKYDLS----------- 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 426 dklvfkkvaklmggKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSG-ATVMDYRDMTYGRTGGPLTVCDIRL 504
Cdd:COG0365 307 --------------SLRLLGSAGEPLNPEVWEWWYEAVGVPIVDGWGQTETGGIfISNLPGLPVKPGSMGKPVPGYDVAV 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 505 VNwEEGNYRVTNKPypqGEVLIGGECVSQ--GYYKLPGKTNEDFFEE-DGqrWFKTGDIGEIQADGVLKIIDRKKDLVKL 581
Cdd:COG0365 373 VD-EDGNPVPPGEE---GELVIKGPWPGMfrGYWNDPERYRETYFGRfPG--WYRTGDGARRDEDGYFWILGRSDDVINV 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 582 qAGEYVSLGKVESELKT-CGIIENICV-YGDPTK-QYTVALVVPNQNHL--EELAqkhglgdksfeelcsspiiekailK 656
Cdd:COG0365 447 -SGHRIGTAEIESALVShPAVAEAAVVgVPDEIRgQVVKAFVVLKPGVEpsDELA------------------------K 501
|
570 580
....*....|....*....|
gi 24586634 657 EIAEHARKcKLQKYEVPAAI 676
Cdd:COG0365 502 ELQAHVRE-ELGPYAYPREI 520
|
|
| PRK08314 |
PRK08314 |
long-chain-fatty-acid--CoA ligase; Validated |
138-626 |
1.65e-25 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 236235 [Multi-domain] Cd Length: 546 Bit Score: 111.21 E-value: 1.65e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 138 EAERTAANFGRglrELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLP 217
Cdd:PRK08314 44 EAERLAGYLQQ---ECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAP 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 218 KFKTLLDKCPLVKTII-----YIEDQ--------LQKTETTGFKEGVKILPFNQVVKTGqdskfeHVPPKG----DDIAI 280
Cdd:PRK08314 121 KVAPAVGNLRLRHVIVaqysdYLPAEpeiavpawLRAEPPLQALAPGGVVAWKEALAAG------LAPPPHtagpDDLAV 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 281 IMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVfelvaesvclmTGVPIGYSTPLTLidtsski 360
Cdd:PRK08314 195 LPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLPLFHV-----------TGMVHSMNAPIYA------- 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 361 krgckGDATVLKPtcmtsvplILDR------ISKgindkvnsgsafkkslfkflyqYKVK-WVQrgYKTPLIDKLVFKKV 433
Cdd:PRK08314 257 -----GATVVLMP--------RWDReaaarlIER----------------------YRVThWTN--IPTMVVDFLASPGL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 434 AKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSgATVMDYRDmtygRT-----GGPLTVCDIRLVNWE 508
Cdd:PRK08314 300 AERDLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMA-QTHSNPPD----RPklqclGIPTFGVDARVIDPE 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 509 egnyrvTNKPYPQGEV---LIGGECVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGE 585
Cdd:PRK08314 375 ------TLEELPPGEVgeiVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMIN-ASGF 447
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 24586634 586 YVSLGKVESELKTCGIIENICVYG--DPTKQYTV-ALVVPNQNH 626
Cdd:PRK08314 448 KVWPAEVENLLYKHPAIQEACVIAtpDPRRGETVkAVVVLRPEA 491
|
|
| PRK07529 |
PRK07529 |
AMP-binding domain protein; Validated |
214-579 |
6.99e-25 |
|
AMP-binding domain protein; Validated
Pssm-ID: 236043 [Multi-domain] Cd Length: 632 Bit Score: 110.04 E-value: 6.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 214 DLLPKFKTLLDKCPLVKTIIYIEDQLQKTETTGF-------KEGVKILPFNQVVKTGQDSK-FEHVPPKGDDIAIIMYTS 285
Cdd:PRK07529 143 DIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLavplirrKAHARILDFDAELARQPGDRlFSGRPIGPDDVAAYFHTG 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 286 GSTGTPKGVLLSHKN------CIATMKGFVdmvpiyPDDVLIGFLPLAHVFELVAesVCLMT---------GVPIGYSTP 350
Cdd:PRK07529 223 GTTGMPKLAQHTHGNevanawLGALLLGLG------PGDTVFCGLPLFHVNALLV--TGLAPlargahvvlATPQGYRGP 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 lTLIDTSSKIKRGCKgdatvlkPTCMTSVPLILDRISKGINDKVNSGSafkkslfkflyqykvkwvqrgyktplidklvf 430
Cdd:PRK07529 295 -GVIANFWKIVERYR-------INFLSGVPTVYAALLQVPVDGHDISS-------------------------------- 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 431 kkvaklmggkVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATvMDYRD--MTYGRTGGPLTVCDIRLVNWE 508
Cdd:PRK07529 335 ----------LRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSS-VNPPDgeRRIGSVGLRLPYQRVRVVILD 403
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24586634 509 E-GNYRVTNKPYPQGEVLIGGECVSQGYykLPGKTNEDFFEEDgqRWFKTGDIGEIQADGVLKIIDRKKDLV 579
Cdd:PRK07529 404 DaGRYLRDCAVDEVGVLCIAGPNVFSGY--LEAAHNKGLWLED--GWLNTGDLGRIDADGYFWLTGRAKDLI 471
|
|
| CHC_CoA_lg |
cd05903 |
Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase); ... |
267-611 |
7.73e-25 |
|
Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase); Cyclohexanecarboxylate-CoA ligase activates the aliphatic ring compound, cyclohexanecarboxylate, for degradation. It catalyzes the synthesis of cyclohexanecarboxylate-CoA thioesters in a two-step reaction involving the formation of cyclohexanecarboxylate-AMP anhydride, followed by the nucleophilic substitution of AMP by CoA.
Pssm-ID: 341229 [Multi-domain] Cd Length: 437 Bit Score: 108.24 E-value: 7.73e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 267 KFEHVPpKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHvfelvaesvclMTGVPIG 346
Cdd:cd05903 85 QFDPAA-MPDAVALLLFTSGTTGEPKGVMHSHNTLSASIRQYAERLGLGPGDVFLVASPMAH-----------QTGFVYG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 347 YSTPLTLidtsskikrgckGDATVLKPTCMTSVPLILDRiskgiNDKVNSGSAfkkslfkflyqykvkwvqrgyKTPLID 426
Cdd:cd05903 153 FTLPLLL------------GAPVVLQDIWDPDKALALMR-----EHGVTFMMG---------------------ATPFLT 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 427 KLVfkKVAKLMGGKV---RIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVM-DYRDMTYGRTGG-PLTVCD 501
Cdd:cd05903 195 DLL--NAVEEAGEPLsrlRTFVCGGATVPRSLARRAAELLGAKVCSAYGSTECPGAVTSItPAPEDRRLYTDGrPLPGVE 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 502 IRLVNweegNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkL 581
Cdd:cd05903 273 IKVVD----DTGATLAPGVEGELLSRGPSVFLGYLDRPDLTADAA--PEG--WFRTGDLARLDEDGYLRITGRSKDII-I 343
|
330 340 350
....*....|....*....|....*....|
gi 24586634 582 QAGEYVSLGKVESELKTCGIIENICVYGDP 611
Cdd:cd05903 344 RGGENIPVLEVEDLLLGHPGVIEAAVVALP 373
|
|
| A_NRPS_PvdJ-like |
cd17649 |
non-ribosomal peptide synthetase; This family of the adenylation (A) domain of nonribosomal ... |
275-699 |
9.55e-25 |
|
non-ribosomal peptide synthetase; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes pyoverdine biosynthesis protein PvdJ involved in the synthesis of pyoverdine, which consists of a chromophore group attached to a variable peptide chain and comprises around 6-12 amino acids that are specific for each Pseudomonas species, and for which the peptide might be first synthesized before the chromophore assembly. Also included is ornibactin biosynthesis protein OrbI; ornibactin is a tetrapeptide siderophore with an l-ornithine-d-hydroxyaspartate-l-serine-l-ornithine backbone. The adenylation domain at the N-terminal of OrbI possibly initiates the ornibactin with the binding of N5-hydroxyornithine. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341304 [Multi-domain] Cd Length: 450 Bit Score: 107.84 E-value: 9.55e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSH----KNCIATMKGFvdmvPIYPDDVLIGFLPLAhvFELVAEsvCLMTgvpigystP 350
Cdd:cd17649 93 PRQLAYVIYTSGSTGTPKGVAVSHgplaAHCQATAERY----GLTPGDRELQFASFN--FDGAHE--QLLP--------P 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LTlidtsskikrgcKGDATVLKPTCMTSVPLILDRISKgiNDKVNSGSAFKKSLFKFLyQYKVKWVQRGYktplidklvf 430
Cdd:cd17649 157 LI------------CGACVVLRPDELWASADELAEMVR--ELGVTVLDLPPAYLQQLA-EEADRTGDGRP---------- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 431 kkvaklmgGKVRIIMSGGAPLSADTHEQIKTCLCLeLIQGYGLTETTSGATVMDYR--------DMTYGRTGGPLTVC-- 500
Cdd:cd17649 212 --------PSLRLYIFGGEALSPELLRRWLKAPVR-LFNAYGPTEATVTPLVWKCEagaaragaSMPIGRPLGGRSAYil 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 501 DIRLvnweegnyrvtnKPYPQ---GEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKIID 573
Cdd:cd17649 283 DADL------------NPVPVgvtGELYIGGEGLARGYLGRPELTAERFvpdpFGAPGSRLYRTGDLARWRDDGVIEYLG 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 574 RKKDLVKLQaGEYVSLGKVESELKTCGIIENICVYGDPTKQYT--VALVVPNQnhleelaqkhglgdksfeelcssPIIE 651
Cdd:cd17649 351 RVDHQVKIR-GFRIELGEIEAALLEHPGVREAAVVALDGAGGKqlVAYVVLRA-----------------------AAAQ 406
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 24586634 652 KAILKEIAEHARKcKLQKYEVPAAItlckeVWSPDMGLvTAAFKLKRK 699
Cdd:cd17649 407 PELRAQLRTALRA-SLPDYMVPAHL-----VFLARLPL-TPNGKLDRK 447
|
|
| PRK08751 |
PRK08751 |
long-chain fatty acid--CoA ligase; |
256-703 |
3.16e-24 |
|
long-chain fatty acid--CoA ligase;
Pssm-ID: 181546 [Multi-domain] Cd Length: 560 Bit Score: 107.66 E-value: 3.16e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 256 FNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPD-----DVLIGFLPLAHVF 330
Cdd:PRK08751 188 FREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKleegcEVVITALPLYHIF 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 331 ELVAESVCLMT--GVPIGYSTPltlidtsskikRGCKGDATVLKPTCMTSVplildrisKGINdkvnsgsafkkSLFKFL 408
Cdd:PRK08751 268 ALTANGLVFMKigGCNHLISNP-----------RDMPGFVKELKKTRFTAF--------TGVN-----------TLFNGL 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 409 YQykvkwvqrgykTPLIDKLVFKKVaklmggkvRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATV--MDYR 486
Cdd:PRK08751 318 LN-----------TPGFDQIDFSSL--------KMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACInpLTLK 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 487 DMTyGRTGGPLTVCDIRLVNwEEGNYRVTNKpypQGEVLIGGECVSQGYYKLPGKTNEDFfeeDGQRWFKTGDIGEIQAD 566
Cdd:PRK08751 379 EYN-GSIGLPIPSTDACIKD-DAGTVLAIGE---IGELCIKGPQVMKGYWKRPEETAKVM---DADGWLHTGDIARMDEQ 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 567 GVLKIIDRKKDLVkLQAGEYVSLGKVESELKTC-GIIEnicvygdptkqytVALVvpnqnhleelaqkhGLGDKSFEELC 645
Cdd:PRK08751 451 GFVYIVDRKKDMI-LVSGFNVYPNEIEDVIAMMpGVLE-------------VAAV--------------GVPDEKSGEIV 502
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24586634 646 SSPIIEK---AILKEIAEHARkCKLQKYEVPAAITLCKEVWSPDMGlvtaafKLKRKDIQD 703
Cdd:PRK08751 503 KVVIVKKdpaLTAEDVKAHAR-ANLTGYKQPRIIEFRKELPKTNVG------KILRRELRD 556
|
|
| A_NRPS_Srf_like |
cd12117 |
The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis ... |
270-624 |
1.80e-23 |
|
The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C); The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the adenylation domain of the Bacillus subtilis termination module (Surfactin domain, SrfA-C) which recognizes a specific amino acid building block, which is then activated and transferred to the terminal thiol of the 4'-phosphopantetheine (Ppan) arm of the downstream peptidyl carrier protein (PCP) domain.
Pssm-ID: 341282 [Multi-domain] Cd Length: 483 Bit Score: 104.59 E-value: 1.80e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 270 HVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGfVDMVPIYPDDVLIGFLPL---AHVFELVaesVCLMTG---V 343
Cdd:cd12117 130 AVPVSPDDLAYVMYTSGSTGRPKGVAVTHRGVVRLVKN-TNYVTLGPDDRVLQTSPLafdASTFEIW---GALLNGarlV 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 344 PIGYSTPLTLIDTSSKIKRGckgDATVLkptCMTSvplildriskgindkvnsgsafkkSLFKFLYQykvkwvqrgyktp 423
Cdd:cd12117 206 LAPKGTLLDPDALGALIAEE---GVTVL---WLTA------------------------ALFNQLAD------------- 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 424 lidklvfkKVAKLMGGkVRIIMSGGAPLSAdthEQIKTCL--C--LELIQGYGLTETTSGAT--VMDYRDMTYGRT--GG 495
Cdd:cd12117 243 --------EDPECFAG-LRELLTGGEVVSP---PHVRRVLaaCpgLRLVNGYGPTENTTFTTshVVTELDEVAGSIpiGR 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 496 PLTVCDIRLVNweegnyrVTNKPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFFE---EDGQRWFKTGDIGEIQADGVL 569
Cdd:cd12117 311 PIANTRVYVLD-------EDGRPVPPgvpGELYVGGDGLALGYLNRPALTAERFVAdpfGPGERLYRTGDLARWLPDGRL 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 570 KIIDRKKDLVKLQaGEYVSLGKVESELKTC-GIIENICVY--GDPTKQYTVALVVPNQ 624
Cdd:cd12117 384 EFLGRIDDQVKIR-GFRIELGEIEAALRAHpGVREAVVVVreDAGGDKRLVAYVVAEG 440
|
|
| A_NRPS_Cytc1-like |
cd17643 |
similar to adenylation domain of cytotrienin synthetase CytC1; This family of the adenylation ... |
275-625 |
6.65e-23 |
|
similar to adenylation domain of cytotrienin synthetase CytC1; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes Streptomyces sp. cytotrienin synthetase (CytC1), a relatively promiscuous adenylation enzyme that installs the aminoacyl moieties on the phosphopantetheinyl arm of the holo carrier protein CytC2. Also included are Streptomyces sp Thr1, involved in the biosynthesis of 4-chlorothreonine, Pseudomonas aeruginosa pyoverdine synthetase D (PvdD), involved in the biosynthesis of the siderophore pyoverdine and Pseudomonas syringae syringopeptin synthetase, where syringpeptin is a necrosis-inducing phytotoxin that functions as a virulence determinant in the plant-pathogen interaction. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341298 [Multi-domain] Cd Length: 450 Bit Score: 102.39 E-value: 6.65e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGF-------------LPLAHVFELVAesvclmt 341
Cdd:cd17643 92 PDDLAYVIYTSGSTGRPKGVVVSHANVLALFAATQRWFGFNEDDVWTLFhsyafdfsvweiwGALLHGGRLVV------- 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 342 gVPigYSTPLTLIDTSSKIkrgCKGDATVLKPTcmtsvPlildriskgindkvnsgSAFkkslfkflYQYkVKWVQRGYK 421
Cdd:cd17643 165 -VP--YEVARSPEDFARLL---RDEGVTVLNQT-----P-----------------SAF--------YQL-VEAADRDGR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 422 TPLidklvfkkvaklmggKVRIIMSGGAPLSADT---HEQIKTCLCLELIQGYGLTETTSGATV--MDyRDMTYGRT--- 493
Cdd:cd17643 208 DPL---------------ALRYVIFGGEALEAAMlrpWAGRFGLDRPQLVNMYGITETTVHVTFrpLD-AADLPAAAasp 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 494 -GGPLTVCDIRLVNwEEGNyrvtnkPYP---QGEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQA 565
Cdd:cd17643 272 iGRPLPGLRVYVLD-ADGR------PVPpgvVGELYVSGAGVARGYLGRPELTAERFvanpFGGPGSRMYRTGDLARRLP 344
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24586634 566 DGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICV---YGDPTKQYTVALVVPNQN 625
Cdd:cd17643 345 DGELEYLGRADEQVKIR-GFRIELGEIEAALATHPSVRDAAVivrEDEPGDTRLVAYVVADDG 406
|
|
| A_NRPS_Bac |
cd17655 |
bacitracin synthetase and related proteins; This family of the adenylation (A) domain of ... |
135-630 |
7.05e-23 |
|
bacitracin synthetase and related proteins; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes bacitracin synthetases 1, 2, and 3 (BA1, also known as ATP-dependent cysteine adenylase or cysteine activase, BA2, also known as ATP-dependent lysine adenylase or lysine activase, and BA3, also known as ATP-dependent isoleucine adenylase or isoleucine activase) in Bacilli. Bacitracin is a mixture of related cyclic peptides used as a polypeptide antibiotic. This family also includes gramicidin synthetase 1 involved in synthesis of the cyclic peptide antibiotic gramicidin S via activation of phenylalanine. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341310 [Multi-domain] Cd Length: 490 Bit Score: 102.79 E-value: 7.05e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQA---MPIVTVYAT------LGDDGVahcitete 205
Cdd:cd17655 24 TYRELNERANQLARTLREKGVGPDTIVGIMAERSLEMIVGILGILKAGgayLPIDPDYPEeriqyiLEDSGA-------- 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 206 vttvitshdllpkfKTLLDKCPLVKTIIYIEDQLQKTETTGFKEGVKILpfnqvvktgqdskfeHVPPKGDDIAIIMYTS 285
Cdd:cd17655 96 --------------DILLTQSHLQPPIAFIGLIDLLDEDTIYHEESENL---------------EPVSKSDDLAYVIYTS 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 286 GSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELVAESVclmtgvpigySTPLTLidtsskikrgck 365
Cdd:cd17655 147 GSTGKPKGVMIEHRGVVNLVEWANKVIYQGEHLRVALFASIS--FDASVTEI----------FASLLS------------ 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 366 GDATVLKPtcmtsvplildriskgiNDKVNSGSAfkksLFKFLYQYKVKWVQrgyKTPLIDKLVfKKVAKLMGGKVRIIM 445
Cdd:cd17655 203 GNTLYIVR-----------------KETVLDGQA----LTQYIRQNRITIID---LTPAHLKLL-DAADDSEGLSLKHLI 257
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 446 SGGAPLSADTHEQIKTCLCL--ELIQGYGLTETTSGATVMDYRDMTYGRT----GGPLtvcdirlvnweeGNYRV----- 514
Cdd:cd17655 258 VGGEALSTELAKKIIELFGTnpTITNAYGPTETTVDASIYQYEPETDQQVsvpiGKPL------------GNTRIyildq 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 515 TNKPYP---QGEVLIGGECVSQGYYKLPGKTNEDFFE---EDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVS 588
Cdd:cd17655 326 YGRPQPvgvAGELYIGGEGVARGYLNRPELTAEKFVDdpfVPGERMYRTGDLARWLPDGNIEFLGRIDHQVKIR-GYRIE 404
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 24586634 589 LGKVESELKTcgiIENIcvygdptkQYTVALVVPNQNHLEEL 630
Cdd:cd17655 405 LGEIEARLLQ---HPDI--------KEAVVIARKDEQGQNYL 435
|
|
| PRK07059 |
PRK07059 |
Long-chain-fatty-acid--CoA ligase; Validated |
255-603 |
7.59e-23 |
|
Long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 235923 [Multi-domain] Cd Length: 557 Bit Score: 103.18 E-value: 7.59e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 255 PFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATM-KGFVDMVPIY----PDDVLIGF--LPLA 327
Cdd:PRK07059 183 RFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVlQMEAWLQPAFekkpRPDQLNFVcaLPLY 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 328 HVFELvaeSVCLMTGVPIGYSTplTLIDTSSKIKrgckGDATVLKPTCMTSVPlildriskGINdkvnsgsafkkSLFKF 407
Cdd:PRK07059 263 HIFAL---TVCGLLGMRTGGRN--ILIPNPRDIP----GFIKELKKYQVHIFP--------AVN-----------TLYNA 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 408 LYQykvkwvqrgykTPLIDKLVFKKVAKLMGGKvriiMSGGAPLSADTHEQIKTclclELIQGYGLTETTSGATV--MDY 485
Cdd:PRK07059 315 LLN-----------NPDFDKLDFSKLIVANGGG----MAVQRPVAERWLEMTGC----PITEGYGLSETSPVATCnpVDA 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 486 RDMTyGRTGGPL--TVCDIRLvnwEEGNYRVTNKPypqGEVLIGGECVSQGYYKLPGKTNEDFFEeDGqrWFKTGDIGEI 563
Cdd:PRK07059 376 TEFS-GTIGLPLpsTEVSIRD---DDGNDLPLGEP---GEICIRGPQVMAGYWNRPDETAKVMTA-DG--FFRTGDVGVM 445
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 24586634 564 QADGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTC-GIIE 603
Cdd:PRK07059 446 DERGYTKIVDRKKDMI-LVSGFNVYPNEIEEVVASHpGVLE 485
|
|
| PRK07798 |
PRK07798 |
acyl-CoA synthetase; Validated |
135-682 |
1.40e-22 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 236100 [Multi-domain] Cd Length: 533 Bit Score: 102.27 E-value: 1.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFK-QAMPI-----------VTVYATLGDDGVAHcit 202
Cdd:PRK07798 30 TYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKaRAVPVnvnyryvedelRYLLDDSDAVALVY--- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 203 etevttvitSHDLLPKFKTLLDKCPLVKTIIYIEDQLQKTETTGfkeGVkilPFNQVVKTGqDSKFEHVPPKGDDIaIIM 282
Cdd:PRK07798 107 ---------EREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPG---AV---DYEDALAAG-SPERDFGERSPDDL-YLL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 283 YTSGSTGTPKGVLLSHknciatmkgfvdmvpiypDDvligflplahVFELVAESVCLMTGVPIgySTPLTLidtsskIKR 362
Cdd:PRK07798 170 YTGGTTGMPKGVMWRQ------------------ED----------IFRVLLGGRDFATGEPI--EDEEEL------AKR 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 363 GCKGDATVLKPTCmtsvPLI-------------------------------LDRISKginDKVNS----GSAFKKslfkf 407
Cdd:PRK07798 214 AAAGPGMRRFPAP----PLMhgagqwaafaalfsgqtvvllpdvrfdadevWRTIER---EKVNVitivGDAMAR----- 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 408 lyqykvkwvqrgyktPLIDKLVFKKVAKLMGgkVRIIMSGGAPLSADTHEQIKTCLC-LELIQGYGLTETTSGATVMDYR 486
Cdd:PRK07798 282 ---------------PLLDALEARGPYDLSS--LFAIASGGALFSPSVKEALLELLPnVVLTDSIGSSETGFGGSGTVAK 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 487 DMTygRTGGPLTVCDIRLVNWEEGNYRVTNKPYPQGEVLIGGEcVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQAD 566
Cdd:PRK07798 345 GAV--HTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWIARRGH-IPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEAD 421
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 567 GVLKIIDRkKDLVKLQAGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVPNQNHLEELAqkhglgdksfee 643
Cdd:PRK07798 422 GTITLLGR-GSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDErwgQEVVAVVQLREGARPDLA------------ 488
|
570 580 590
....*....|....*....|....*....|....*....
gi 24586634 644 lcsspiiekailkEIAEHARKcKLQKYEVPAAITLCKEV 682
Cdd:PRK07798 489 -------------ELRAHCRS-SLAGYKVPRAIWFVDEV 513
|
|
| PRK07787 |
PRK07787 |
acyl-CoA synthetase; Validated |
270-623 |
1.94e-22 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 236096 [Multi-domain] Cd Length: 471 Bit Score: 101.22 E-value: 1.94e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 270 HVPPKGDD--IAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVaesVCLMTGVPIGY 347
Cdd:PRK07787 120 HRYPEPDPdaPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLV---LGVLGPLRIGN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 348 STPLTLIDTSSKIKRGCKGDATVLkptcmTSVPLILDRISkginDKVNSGSAFKKSlfkflyqykvkwvqrgyktplidk 427
Cdd:PRK07787 197 RFVHTGRPTPEAYAQALSEGGTLY-----FGVPTVWSRIA----ADPEAARALRGA------------------------ 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 428 lvfkkvaklmggkvRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTET---TSGATVMDYRDmtyGRTGGPLTVCDIRL 504
Cdd:PRK07787 244 --------------RLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETlitLSTRADGERRP---GWVGLPLAGVETRL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 505 VNwEEGNyRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDfFEEDGqrWFKTGDIGEIQADGVLKIIDRKK-DLVKlqA 583
Cdd:PRK07787 307 VD-EDGG-PVPHDGETVGELQVRGPTLFDGYLNRPDATAAA-FTADG--WFRTGDVAVVDPDGMHRIVGREStDLIK--S 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 24586634 584 GEY-VSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVPN 623
Cdd:PRK07787 380 GGYrIGAGEIETALLGHPGVREAAVVGVPDDdlgQRIVAYVVGA 423
|
|
| ttLC_FACS_AlkK_like |
cd12119 |
Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles; This family includes ... |
214-588 |
2.10e-22 |
|
Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles; This family includes fatty acyl-CoA synthetases that can activate medium-chain to long-chain fatty acids. They catalyze the ATP-dependent acylation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. The fatty acyl-CoA synthetase from Thermus thermophiles in this family catalyzes the long-chain fatty acid, myristoyl acid, while another member in this family, the AlkK protein identified from Pseudomonas oleovorans, targets medium chain fatty acids. This family also includes uncharacterized FACS proteins.
Pssm-ID: 341284 [Multi-domain] Cd Length: 518 Bit Score: 101.55 E-value: 2.10e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 214 DLLPKFKTLLDKCPLVKTIIYIEDQLQKTETTGfkegVKILPFNQVVktGQDSKFEHVPP-KGDDIAIIMYTSGSTGTPK 292
Cdd:cd12119 106 DFLPLLEAIAPRLPTVEHVVVMTDDAAMPEPAG----VGVLAYEELL--AAESPEYDWPDfDENTAAAICYTSGTTGNPK 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 293 GVLLSHKNCI--ATMKGFVDMVPIYPDDVLIGFLPLAHVfelvaesvcLMTGVPigYSTPltlidtsskikrgckgdatv 370
Cdd:cd12119 180 GVVYSHRSLVlhAMAALLTDGLGLSESDVVLPVVPMFHV---------NAWGLP--YAAA-------------------- 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 371 lkptcMTSVPLILdriskgindkvnSGSAFK-KSLFKFLYQYKVKWVQrGYKTPLIDKLVFKKVAKLMGGKVRIIMSGGA 449
Cdd:cd12119 229 -----MVGAKLVL------------PGPYLDpASLAELIEREGVTFAA-GVPTVWQGLLDHLEANGRDLSSLRRVVIGGS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 450 PLSADTHEQIKTcLCLELIQGYGLTETTSGATV---------------MDYRDMTyGRtggPLTVCDIRLVNwEEGNyRV 514
Cdd:cd12119 291 AVPRSLIEAFEE-RGVRVIHAWGMTETSPLGTVarppsehsnlsedeqLALRAKQ-GR---PVPGVELRIVD-DDGR-EL 363
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24586634 515 TNKPYPQGEVLIGGECVSQGYYKLPGKTneDFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVS 588
Cdd:cd12119 364 PWDGKAVGELQVRGPWVTKSYYKNDEES--EALTEDG--WLRTGDVATIDEDGYLTITDRSKDVIK-SGGEWIS 432
|
|
| PRK06087 |
PRK06087 |
medium-chain fatty-acid--CoA ligase; |
271-630 |
2.16e-22 |
|
medium-chain fatty-acid--CoA ligase;
Pssm-ID: 180393 [Multi-domain] Cd Length: 547 Bit Score: 101.75 E-value: 2.16e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVfelvaesvclmTGVPIGYSTP 350
Cdd:PRK06087 182 ITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHA-----------TGFLHGVTAP 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LTLidtsskikrgckGDATVLKptcmtsvplildriskginDKVNSGSAFKkslfkFLYQYKVKWVQRGykTPLI-DKLV 429
Cdd:PRK06087 251 FLI------------GARSVLL-------------------DIFTPDACLA-----LLEQQRCTCMLGA--TPFIyDLLN 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 430 FKKVAKLMGGKVRIIMSGGAPLSADTHEQ-----IKTCLCleliqgYGLTETTSGATVM--DYRDMTYGRTGGPLTVCDI 502
Cdd:PRK06087 293 LLEKQPADLSALRFFLCGGTTIPKKVAREcqqrgIKLLSV------YGSTESSPHAVVNldDPLSRFMHTDGYAAAGVEI 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 503 RLVNweegNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQ 582
Cdd:PRK06087 367 KVVD----EARKTLPPGCEGEEASRGPNVFMGYLDEPELTAR-ALDEEG--WYYSGDLCRMDEAGYIKITGRKKDII-VR 438
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 24586634 583 AGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVPNQNH----LEEL 630
Cdd:PRK06087 439 GGENISSREVEDILLQHPKIHDACVVAMPDErlgERSCAYVVLKAPHhsltLEEV 493
|
|
| FAAL |
cd05931 |
Fatty acyl-AMP ligase (FAAL); FAAL belongs to the class I adenylate forming enzyme family and ... |
135-579 |
2.94e-22 |
|
Fatty acyl-AMP ligase (FAAL); FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin.
Pssm-ID: 341254 [Multi-domain] Cd Length: 547 Bit Score: 101.16 E-value: 2.94e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGqKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYAtlgDDGVAHcitetevttvitshd 214
Cdd:cd05931 26 TYAELDRRARAIAARLQAVG-KPGDRVLLLAPPGLDFVAAFLGCLYAGAIAVPLPP---PTPGRH--------------- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 215 lLPKFKTLLDKC--PLVKTIIYIEDQLQKTETTGFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPK 292
Cdd:cd05931 87 -AERLAAILADAgpRVVLTTAAALAAVRAFAASRPAAGTPRLLVVDLLPDTSAADWPPPSPDPDDIAYLQYTSGSTGTPK 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 293 GVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVaesvcLMTGVPIGYSTPLTLIDTSSKIKRgckgdatvlk 372
Cdd:cd05931 166 GVVVTHRNLLANVRQIRRAYGLDPGDVVVSWLPLYHDMGLI-----GGLLTPLYSGGPSVLMSPAAFLRR---------- 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 373 ptcmtsvPLI-LDRISKgiNDKVNSGSAfkkslfKFLYQYKVKWVQRGYKTPLiDkLvfkkvaklmgGKVRIIMSGGAPL 451
Cdd:cd05931 231 -------PLRwLRLISR--YRATISAAP------NFAYDLCVRRVRDEDLEGL-D-L----------SSWRVALNGAEPV 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 452 SADT--------------HEQIKTClcleliqgYGLTETT---------SGATVMDYRDMTYGRT--------------- 493
Cdd:cd05931 284 RPATlrrfaeafapfgfrPEAFRPS--------YGLAEATlfvsggppgTGPVVLRVDRDALAGRavavaaddpaarelv 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 494 --GGPLTVCDIRLVNWEegnyrvTNKPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFFEEDGQ---RWFKTGDIGEIqA 565
Cdd:cd05931 356 scGRPLPDQEVRIVDPE------TGRELPDgevGEIWVRGPSVASGYWGRPEATAETFGALAATdegGWLRTGDLGFL-H 428
|
490
....*....|....
gi 24586634 566 DGVLKIIDRKKDLV 579
Cdd:cd05931 429 DGELYITGRLKDLI 442
|
|
| FACL_like_4 |
cd05944 |
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ... |
275-579 |
7.27e-22 |
|
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341266 [Multi-domain] Cd Length: 359 Bit Score: 97.94 E-value: 7.27e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELV---------AESVCLMTgvPI 345
Cdd:cd05944 1 SDDVAAYFHTGGTTGTPKLAQHTHSNEVYNAWMLALNSLFDPDDVLLCGLPLFHVNGSVvtlltplasGAHVVLAG--PA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 346 GYSTPlTLIDTSSK-IKRgckgdatvLKPTCMTSVPLILDRI-SKGINDKVNSgsafkkslfkflyqykvkwvqrgyktp 423
Cdd:cd05944 79 GYRNP-GLFDNFWKlVER--------YRITSLSTVPTVYAALlQVPVNADISS--------------------------- 122
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 424 lidklvfkkvaklmggkVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVmDYRD--MTYGRTGGPLTVCD 501
Cdd:cd05944 123 -----------------LRFAMSGAAPLPVELRARFEDATGLPVVEGYGLTEATCLVAV-NPPDgpKRPGSVGLRLPYAR 184
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24586634 502 IRLVNWE-EGNYRVTNKPYPQGEVLIGGECVSQGYykLPGKTNEDFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLV 579
Cdd:cd05944 185 VRIKVLDgVGRLLRDCAPDEVGEICVAGPGVFGGY--LYTEGNKNAFVADG--WLNTGDLGRLDADGYLFITGRAKDLI 259
|
|
| BCL_4HBCL |
cd05959 |
Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase); Benzoate ... |
135-624 |
1.33e-21 |
|
Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase); Benzoate CoA ligase and 4-hydroxybenzoate-coenzyme A ligase catalyze the first activating step for benzoate and 4-hydroxybenzoate catabolic pathways, respectively. Although these two enzymes share very high sequence homology, they have their own substrate preference. The reaction proceeds via a two-step process; the first ATP-dependent step forms the substrate-AMP intermediate, while the second step forms the acyl-CoA ester, releasing the AMP. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Some bacteria can use benzoic acid or benzenoid compounds as the sole source of carbon and energy through degradation. Benzoate CoA ligase and 4-hydroxybenzoate-Coenzyme A ligase are key enzymes of this process.
Pssm-ID: 341269 [Multi-domain] Cd Length: 508 Bit Score: 98.98 E-value: 1.33e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQ-AMPIVTVYATLGDDgVAHCITETEVTTVITSH 213
Cdd:cd05959 31 TYAELEAEARRVAGALRALGVKREERVLLIMLDTVDFPTAFLGAIRAgIVPVPVNTLLTPDD-YAYYLEDSRARVVVVSG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 214 DLLPKFKTLLDK-CPLVKTIIYIEdqlqktettGFKEGVKILPFNQVVKTGQDSkFEHVPPKGDDIAIIMYTSGSTGTPK 292
Cdd:cd05959 110 ELAPVLAAALTKsEHTLVVLIVSG---------GAGPEAGALLLAELVAAEAEQ-LKPAATHADDPAFWLYSSGSTGRPK 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 293 GVLLSHKNCIATMKGFV-DMVPIYPDDVLIGFLPLAHVFEL---------VAESVCLMTGVPigysTPLTLIDTsskIKR 362
Cdd:cd05959 180 GVVHLHADIYWTAELYArNVLGIREDDVCFSAAKLFFAYGLgnsltfplsVGATTVLMPERP----TPAAVFKR---IRR 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 363 GckgdatvlKPTCMTSVPLILDRISKGINdkvnsgsafkkslfkflyqykvkWVQRGYKTplidklvfkkvaklmggkVR 442
Cdd:cd05959 253 Y--------RPTVFFGVPTLYAAMLAAPN-----------------------LPSRDLSS------------------LR 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 443 IIMSGGAPLSADTHEQIKTCLCLELIQGYGLTET----TSGATvmdyRDMTYGRTGGPLTVCDIRLVNwEEGNYRVTNKP 518
Cdd:cd05959 284 LCVSAGEALPAEVGERWKARFGLDILDGIGSTEMlhifLSNRP----GRVRYGTTGKPVPGYEVELRD-EDGGDVADGEP 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 519 ypqGEVLIGGECVSQGYYKLPGKTNEDFFEEdgqrWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVESELKT 598
Cdd:cd05959 359 ---GELYVRGPSSATMYWNNRDKTRDTFQGE----WTRTGDKYVRDDDGFYTYAGRADDMLKV-SGIWVSPFEVESALVQ 430
|
490 500 510
....*....|....*....|....*....|.
gi 24586634 599 CGIIENICVYG--DP---TKqyTVALVVPNQ 624
Cdd:cd05959 431 HPAVLEAAVVGveDEdglTK--PKAFVVLRP 459
|
|
| ligase_PEP_1 |
TIGR03098 |
acyl-CoA ligase (AMP-forming), exosortase A-associated; This group of proteins contains an ... |
146-629 |
1.95e-21 |
|
acyl-CoA ligase (AMP-forming), exosortase A-associated; This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Pssm-ID: 211788 [Multi-domain] Cd Length: 517 Bit Score: 98.70 E-value: 1.95e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 146 FGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHDLLPKFKTLLDK 225
Cdd:TIGR03098 38 LASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 226 CPLVKTIIYIEDQLQKTETtgfKEGVKILPFNQVVKTG-QDSKFEHVPpkgDDIAIIMYTSGSTGTPKGVLLSHKNCIAT 304
Cdd:TIGR03098 118 CHDLRTLIIVGDPAHASEG---HPGEEPASWPKLLALGdADPPHPVID---SDMAAILYTSGSTGRPKGVVLSHRNLVAG 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 305 MKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTG---VPIGYSTPLTLIDTSSKikrgckgdatvLKPTCMTSVPL 381
Cdd:TIGR03098 192 AQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGatvVLHDYLLPRDVLKALEK-----------HGITGLAAVPP 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 382 IldriskgindkvnsgsafkkslfkflyqykvkWVQrgyktplIDKLVFKKVAklmGGKVRIIMSGGAPLSADTHEQIKT 461
Cdd:TIGR03098 261 L--------------------------------WAQ-------LAQLDWPESA---APSLRYLTNSGGAMPRATLSRLRS 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 462 CLCL-ELIQGYGLTE----TTSGATVMDYRDMTYGRTggpLTVCDIRLVNwEEGNYRVTNKPypqGEVLIGGECVSQGYY 536
Cdd:TIGR03098 299 FLPNaRLFLMYGLTEafrsTYLPPEEVDRRPDSIGKA---IPNAEVLVLR-EDGSECAPGEE---GELVHRGALVAMGYW 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 537 KLPGKTNEDFFEEDGQR----------WfkTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKVESELKTCGIIENIC 606
Cdd:TIGR03098 372 NDPEKTAERFRPLPPFPgelhlpelavW--SGDTVRRDEEGFLYFVGRRDEMIK-TSGYRVSPTEVEEVAYATGLVAEAV 448
|
490 500
....*....|....*....|....*
gi 24586634 607 VYG--DPTKQYTVALVVPNQNHLEE 629
Cdd:TIGR03098 449 AFGvpDPTLGQAIVLVVTPPGGEEL 473
|
|
| A_NRPS_Ta1_like |
cd12116 |
The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A ... |
270-622 |
3.85e-21 |
|
The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase; The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the myxovirescin (TA) antibiotic biosynthetic gene in Myxococcus xanthus; TA production plays a role in predation. It also includes the salinosporamide A polyketide synthase which is involved in the biosynthesis of salinosporamide A, a marine microbial metabolite whose chlorine atom is crucial for potent proteasome inhibition and anticancer activity.
Pssm-ID: 341281 [Multi-domain] Cd Length: 470 Bit Score: 97.36 E-value: 3.85e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 270 HVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLA---HVFELVaesvclmtgvpig 346
Cdd:cd12116 120 RTPVSPDDLAYVIYTSGSTGRPKGVVVSHRNLVNFLHSMRERLGLGPGDRLLAVTTYAfdiSLLELL------------- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 347 ysTPLtlidtsskikrgCKGDATVLKPTCMTSVPLIL-DRI-SKGINdkvnsgsafkkslfkflyqykvkWVQrgyKTPL 424
Cdd:cd12116 187 --LPL------------LAGARVVIAPRETQRDPEALaRLIeAHSIT-----------------------VMQ---ATPA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 425 IDKLVFKKvaklmGGKVR---IIMSGGAPLSADTHEQiktcLCL---ELIQGYGLTETTSGATVMDYRDMTYGRT-GGPL 497
Cdd:cd12116 227 TWRMLLDA-----GWQGRaglTALCGGEALPPDLAAR----LLSrvgSLWNLYGPTETTIWSTAARVTAAAGPIPiGRPL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 T-----VCDIRLvnweegnyrvtnKPYPQG---EVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQA 565
Cdd:cd12116 298 AntqvyVLDAAL------------RPVPPGvpgELYIGGDGVAQGYLGRPALTAERFvpdpFAGPGSRLYRTGDLVRRRA 365
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 24586634 566 DGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICV--YGDPTKQYTVALVVP 622
Cdd:cd12116 366 DGRLEYLGRADGQVKIR-GHRIELGEIEAALAAHPGVAQAAVvvREDGGDRRLVAYVVL 423
|
|
| PRK05852 |
PRK05852 |
fatty acid--CoA ligase family protein; |
275-707 |
7.13e-21 |
|
fatty acid--CoA ligase family protein;
Pssm-ID: 235625 [Multi-domain] Cd Length: 534 Bit Score: 96.88 E-value: 7.13e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAesVCLMTGVPIGystpLTLI 354
Cdd:PRK05852 175 RPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIA--ALLATLASGG----AVLL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 DTSSKIK-RGCKGDATVLKPTCMTSVPLIldriskgindkvnsgsafkkslFKFLYQyKVKWVQRGYKTPlidklvfkkv 433
Cdd:PRK05852 249 PARGRFSaHTFWDDIKAVGATWYTAVPTI----------------------HQILLE-RAATEPSGRKPA---------- 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 434 aklmggKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGA--TVMDYRDMTY---------GRTGGPltvcDI 502
Cdd:PRK05852 296 ------ALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVttTQIEGIGQTEnpvvstglvGRSTGA----QI 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 503 RLVNWEEGNYrvtnKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQ 582
Cdd:PRK05852 366 RIVGSDGLPL----PAGAVGEVWLRGTTVVRGYLGDPTITAANF--TDG--WLRTGDLGSLSAAGDLSIRGRIKELIN-R 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 583 AGEYVSLGKVESELKTC-GIIENIcVYGDPTKQY--TV-ALVVPNQNhleelaqkhglgdksfeelcSSPIIEkailkEI 658
Cdd:PRK05852 437 GGEKISPERVEGVLASHpNVMEAA-VFGVPDQLYgeAVaAVIVPRES--------------------APPTAE-----EL 490
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 24586634 659 AEHARKcKLQKYEVPAAITLCKEVwsPDmglvTAAFKLKRKDIQDRYQH 707
Cdd:PRK05852 491 VQFCRE-RLAAFEIPASFQEASGL--PH----TAKGSLDRRAVAEQFGH 532
|
|
| PRK06710 |
PRK06710 |
long-chain-fatty-acid--CoA ligase; Validated |
224-632 |
1.31e-20 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 180666 [Multi-domain] Cd Length: 563 Bit Score: 96.26 E-value: 1.31e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 224 DKCPLVKTIIYIEDQLQKTE-TTGFKEGVKILPFNQVVKTgQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCI 302
Cdd:PRK06710 154 DFLPFPKNLLYPFVQKKQSNlVVKVSESETIHLWNSVEKE-VNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLV 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 303 A-TMKGFVDMVP-IYPDDVLIGFLPLAHVFELVA-ESVCLMTGVPIgystpltlidtsskikrgckgdatVLKPTcmTSV 379
Cdd:PRK06710 233 SnTLMGVQWLYNcKEGEEVVLGVLPFFHVYGMTAvMNLSIMQGYKM------------------------VLIPK--FDM 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 380 PLILDRISKgindkvnsgsaFKKSLFKflyqykvkwvqrGYKTPLIDKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQI 459
Cdd:PRK06710 287 KMVFEAIKK-----------HKVTLFP------------GAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQEKF 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 460 KTCLCLELIQGYGLTETTSGA-TVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNyrvTNKPYPQGEVLIGGECVSQGYYKL 538
Cdd:PRK06710 344 ETVTGGKLVEGYGLTESSPVThSNFLWEKRVPGSIGVPWPDTEAMIMSLETGE---ALPPGEIGEIVVKGPQIMKGYWNK 420
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 539 PGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTCGIIENICVYG--DPTKQYT 616
Cdd:PRK06710 421 PEETAAVL--QDG--WLHTGDVGYMDEDGFFYVKDRKKDMI-VASGFNVYPREVEEVLYEHEKVQEVVTIGvpDPYRGET 495
|
410 420
....*....|....*....|
gi 24586634 617 V-ALVVPNQNHL---EELAQ 632
Cdd:PRK06710 496 VkAFVVLKEGTEcseEELNQ 515
|
|
| PLN02574 |
PLN02574 |
4-coumarate--CoA ligase-like |
255-624 |
1.65e-20 |
|
4-coumarate--CoA ligase-like
Pssm-ID: 215312 [Multi-domain] Cd Length: 560 Bit Score: 96.06 E-value: 1.65e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 255 PFNQVVKtgQDSKFEHVPP-KGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPI---YP--DDVLIGFLPLAH 328
Cdd:PLN02574 178 KFYELIK--EDFDFVPKPViKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASqyeYPgsDNVYLAALPMFH 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 329 VFELVaesvCLMTGvpigystpltLIDTSSKIKRGCKGDAtvlkptcmtsvplildriskgiNDKVNSGSAFKKSLFKFL 408
Cdd:PLN02574 256 IYGLS----LFVVG----------LLSLGSTIVVMRRFDA----------------------SDMVKVIDRFKVTHFPVV 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 409 yqykvkwvqrgykTPLIDKLVfkKVAKLMGGKV----RIIMSGGAPLSADTHEQ-IKTCLCLELIQGYGLTETTSGAT-- 481
Cdd:PLN02574 300 -------------PPILMALT--KKAKGVCGEVlkslKQVSCGAAPLSGKFIQDfVQTLPHVDFIQGYGMTESTAVGTrg 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 482 VMDYRDMTYGRTGGPLTVCDIRLVNWEEGNYRvtnKPYPQGEVLIGGECVSQGYYKLPgKTNEDFFEEDGqrWFKTGDIG 561
Cdd:PLN02574 365 FNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLL---PPGNCGELWIQGPGVMKGYLNNP-KATQSTIDKDG--WLRTGDIA 438
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24586634 562 EIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVPNQ 624
Cdd:PLN02574 439 YFDEDGYLYIVDRLKEIIKYK-GFQIAPADLEAVLISHPEIIDAAVTAVPDKecgEIPVAFVVRRQ 503
|
|
| A_NRPS_TlmIV_like |
cd12114 |
The adenylation domain of nonribosomal peptide synthetases (NRPS), including ... |
271-622 |
1.71e-20 |
|
The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes; The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the TLM biosynthetic gene cluster from Streptoalloteichus that consists of nine NRPS genes; the N-terminal module of TlmVI (NRPS-5) and the starter module of BlmVI (NRPS-5) are comprised of the acyl CoA ligase (AL) and acyl carrier protein (ACP)-like domains, which are thought to be involved in the biosynthesis of the beta-aminoalaninamide moiety.
Pssm-ID: 341279 [Multi-domain] Cd Length: 477 Bit Score: 95.42 E-value: 1.71e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAH---VFELVAesvCLMTGVPIGY 347
Cdd:cd12114 121 VDVAPDDLAYVIFTSGSTGTPKGVMISHRAALNTILDINRRFAVGPDDRVLALSSLSFdlsVYDIFG---ALSAGATLVL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 348 STPLTLIDTSSKIKRGCKGDATVLkptcmTSVPLILDRISkginDKVNSGSAFKKSLfkflyqykvkwvqRGyktplidk 427
Cdd:cd12114 198 PDEARRRDPAHWAELIERHGVTLW-----NSVPALLEMLL----DVLEAAQALLPSL-------------RL-------- 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 428 lvfkkvaklmggkvrIIMSG---GAPLSADTHEQIKTClclELIQGYGLTETTSGATV-------MDYRDMTYGRtggPL 497
Cdd:cd12114 248 ---------------VLLSGdwiPLDLPARLRALAPDA---RLISLGGATEASIWSIYhpidevpPDWRSIPYGR---PL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 TvcdirlvnweeGN-YRVTN---KPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFFE-EDGQRWFKTGDIGEIQADGVL 569
Cdd:cd12114 307 A-----------NQrYRVLDprgRDCPDwvpGELWIGGRGVALGYLGDPELTAARFVThPDGERLYRTGDLGRYRPDGTL 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 24586634 570 KIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICV--YGDPTKQYTVALVVP 622
Cdd:cd12114 376 EFLGRRDGQVKVR-GYRIELGEIEAALQAHPGVARAVVvvLGDPGGKRLAAFVVP 429
|
|
| PRK12316 |
PRK12316 |
peptide synthase; Provisional |
271-704 |
4.39e-20 |
|
peptide synthase; Provisional
Pssm-ID: 237054 [Multi-domain] Cd Length: 5163 Bit Score: 96.18 E-value: 4.39e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELVAEsvclmtgvpiGYSTP 350
Cdd:PRK12316 4689 VRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPDDRVLQFMSFS--FDGSHE----------GLYHP 4756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LtlidtsskikrgCKGDATVLKPTcmtsvplildriskGINDKvnsgsafkKSLFKFLYQYKVKWVQrgYKTPLIDKLVF 430
Cdd:PRK12316 4757 L------------INGASVVIRDD--------------SLWDP--------ERLYAEIHEHRVTVLV--FPPVYLQQLAE 4800
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 431 KKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCL-CLELIQGYGLTETTSGATVMDYRDMT-----YGRTGGPLTVCDIRL 504
Cdd:PRK12316 4801 HAERDGEPPSLRVYCFGGEAVAQASYDLAWRALkPVYLFNGYGPTETTVTVLLWKARDGDacgaaYMPIGTPLGNRSGYV 4880
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 505 VNWEEGnyrvtnkPYP---QGEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKIIDRKKD 577
Cdd:PRK12316 4881 LDGQLN-------PLPvgvAGELYLGGEGVARGYLERPALTAERFvpdpFGAPGGRLYRTGDLARYRADGVIDYLGRVDH 4953
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 578 LVKLQaGEYVSLGKVESELKTCGIIENICVYGD--PTKQYTVALVVPNQNHLEElaqkhglgdksfeelcsSPIIEKAIL 655
Cdd:PRK12316 4954 QVKIR-GFRIELGEIEARLREHPAVREAVVIAQegAVGKQLVGYVVPQDPALAD-----------------ADEAQAELR 5015
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24586634 656 KEIAEHARKCkLQKYEVPAAITLC-------------KEVWSPDMGLVTAAFKLKRKDIQDR 704
Cdd:PRK12316 5016 DELKAALRER-LPEYMVPAHLVFLarmpltpngkldrKALPQPDASLLQQAYVAPRSELEQQ 5076
|
|
| FACL_like_6 |
cd05922 |
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ... |
271-682 |
6.31e-20 |
|
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341246 [Multi-domain] Cd Length: 457 Bit Score: 93.27 E-value: 6.31e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELvaeSVcLMTGVPIGYStp 350
Cdd:cd05922 112 HEVSHEDLALLLYTSGSTGSPKLVRLSHQNLLANARSIAEYLGITADDRALTVLPLSYDYGL---SV-LNTHLLRGAT-- 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 lTLIDTSSKIKRGCKGDATVLKPTCMTSVPlildriskgindkvnsgsafkkSLFKFLyqykvkwvqrgyktpliDKLVF 430
Cdd:cd05922 186 -LVLTNDGVLDDAFWEDLREHGATGLAGVP----------------------STYAML-----------------TRLGF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 431 KKvAKLmgGKVRIIMSGGAPLSADTHEQIKtclclELIQG------YGLTETTsgatvmdyRDMTY----------GRTG 494
Cdd:cd05922 226 DP-AKL--PSLRYLTQAGGRLPQETIARLR-----ELLPGaqvyvmYGQTEAT--------RRMTYlpperilekpGSIG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 495 GPLTVCDIRLVNwEEGNyrvtnkPYPQGEVligGECVSQGYYKLPGKTNEDFFEEDGQRW---FKTGDIGEIQADGVLKI 571
Cdd:cd05922 290 LAIPGGEFEILD-DDGT------PTPPGEP---GEIVHRGPNVMKGYWNDPPYRRKEGRGggvLHTGDLARRDEDGFLFI 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 572 IDRKKDLVKLqAGEYVSLGKVESELKTCGIIENICVYGDP-TKQYTVALVVpnqnhleelaqkhglgdksfeeLCSSPII 650
Cdd:cd05922 360 VGRRDRMIKL-FGNRISPTEIEAAARSIGLIIEAAAVGLPdPLGEKLALFV----------------------TAPDKID 416
|
410 420 430
....*....|....*....|....*....|..
gi 24586634 651 EKAILKEIAEharkcKLQKYEVPAAITLCKEV 682
Cdd:cd05922 417 PKDVLRSLAE-----RLPPYKVPATVRVVDEL 443
|
|
| FACL_DitJ_like |
cd05934 |
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ... |
277-611 |
7.92e-20 |
|
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Members of this family include DitJ from Pseudomonas and similar proteins.
Pssm-ID: 341257 [Multi-domain] Cd Length: 422 Bit Score: 92.74 E-value: 7.92e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHvfeLVAESVCLMTGVPIGYStpLTLIDT 356
Cdd:cd05934 82 DPASILYTSGTTGPPKGVVITHANLTFAGYYSARRFGLGEDDVYLTVLPLFH---INAQAVSVLAALSVGAT--LVLLPR 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 357 SSKikRGCKGDATVLKPTCMTSVPLILdriskgindkvnsgsafkkslfKFLYqykvkwvqrgyKTPlidklvfkKVAKL 436
Cdd:cd05934 157 FSA--SRFWSDVRRYGATVTNYLGAML----------------------SYLL-----------AQP--------PSPDD 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 437 MGGKVRIIMSGGAPlsADTHEQIKTCLCLELIQGYGLTET---TSGATVMDYRDMTYGRtGGPLtvCDIRLVNWEegnyr 513
Cdd:cd05934 194 RAHRLRAAYGAPNP--PELHEEFEERFGVRLLEGYGMTETivgVIGPRDEPRRPGSIGR-PAPG--YEVRIVDDD----- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 514 vtNKPYPQGEVligGECV---------SQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAG 584
Cdd:cd05934 264 --GQELPAGEP---GELVirglrgwgfFKGYYNMPEATAEAM--RNG--WFHTGDLGYRDADGFFYFVDRKKDMIR-RRG 333
|
330 340
....*....|....*....|....*..
gi 24586634 585 EYVSLGKVESELKTCGIIENICVYGDP 611
Cdd:cd05934 334 ENISSAEVERAILRHPAVREAAVVAVP 360
|
|
| FACL_like_2 |
cd05917 |
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ... |
276-615 |
9.35e-20 |
|
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341241 [Multi-domain] Cd Length: 349 Bit Score: 91.19 E-value: 9.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCI--ATMKGfvDMVPIYPDDVLIGFLPLAHVFELVAESV-CLMTGvpigystplt 352
Cdd:cd05917 2 DDVINIQFTSGTTGSPKGATLTHHNIVnnGYFIG--ERLGLTEQDRLCIPVPLFHCFGSVLGVLaCLTHG---------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 353 lidtsskikrgckgdATVLKPTCMTSVPLILDRISKgindkvnsgsaFKKSlfkFLYqykvkwvqrGYKTPLIDKLVFKK 432
Cdd:cd05917 70 ---------------ATMVFPSPSFDPLAVLEAIEK-----------EKCT---ALH---------GVPTMFIAELEHPD 111
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 433 VAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQ-GYGLTETTSGAT---VMDYRDMTYGRTGGPLTVCDIRLVNwE 508
Cdd:cd05917 112 FDKFDLSSLRTGIMAGAPCPPELMKRVIEVMNMKDVTiAYGMTETSPVSTqtrTDDSIEKRVNTVGRIMPHTEAKIVD-P 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 509 EGnyRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEdffEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVS 588
Cdd:cd05917 191 EG--GIVPPVGVPGELCIRGYSVMKGYWNDPEKTAE---AIDGDGWLHTGDLAVMDEDGYCRIVGRIKDMI-IRGGENIY 264
|
330 340
....*....|....*....|....*..
gi 24586634 589 LGKVESELKTCGIIENICVYGDPTKQY 615
Cdd:cd05917 265 PREIEEFLHTHPKVSDVQVVGVPDERY 291
|
|
| PRK08316 |
PRK08316 |
acyl-CoA synthetase; Validated |
129-626 |
1.03e-19 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 181381 [Multi-domain] Cd Length: 523 Bit Score: 93.07 E-value: 1.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 129 GDYKWkTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTT 208
Cdd:PRK08316 33 GDRSW-TYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 209 VITSHDLLPKFKTLLDKCPLVKTIIyiEDQLQKTETTGfkegvKILPFNQVVKTGQDSKFEhVPPKGDDIAIIMYTSGST 288
Cdd:PRK08316 112 FLVDPALAPTAEAALALLPVDTLIL--SLVLGGREAPG-----GWLDFADWAEAGSVAEPD-VELADDDLAQILYTSGTE 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 289 GTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELvaeSVCLMTGVPIGYSTplTLIDtsskikrgckgda 368
Cdd:PRK08316 184 SLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQL---DVFLGPYLYVGATN--VILD------------- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 369 tvlKPTcmtsVPLILDRISKginDKVNSgsafkkslfkfLYQYKVKWVqrgyktPLIDKLVFKKvAKLmgGKVRIIMSGG 448
Cdd:PRK08316 246 ---APD----PELILRTIEA---ERITS-----------FFAPPTVWI------SLLRHPDFDT-RDL--SSLRKGYYGA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 449 APLSADTHEQIKTCL-CLELIQGYGLTETTSGATVM--DYRDMTYGRTGGPLTVCDIRLVNwEEGNyrvtnkPYPQGEVl 525
Cdd:PRK08316 296 SIMPVEVLKELRERLpGLRFYNCYGQTEIAPLATVLgpEEHLRRPGSAGRPVLNVETRVVD-DDGN------DVAPGEV- 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 526 igGECVSQ------GYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKVESELKTC 599
Cdd:PRK08316 368 --GEIVHRspqlmlGYWDDPEKTAEAF--RGG--WFHSGDLGVMDEEGYITVVDRKKDMIK-TGGENVASREVEEALYTH 440
|
490 500 510
....*....|....*....|....*....|
gi 24586634 600 GIIENICVYGDPTKQY---TVALVVPNQNH 626
Cdd:PRK08316 441 PAVAEVAVIGLPDPKWieaVTAVVVPKAGA 470
|
|
| PLN02860 |
PLN02860 |
o-succinylbenzoate-CoA ligase |
276-702 |
2.15e-19 |
|
o-succinylbenzoate-CoA ligase
Pssm-ID: 215464 [Multi-domain] Cd Length: 563 Bit Score: 92.55 E-value: 2.15e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGvpiGYSTPLTLID 355
Cdd:PLN02860 172 DDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVG---ACHVLLPKFD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 356 TSSKIKrgckgdatVLKP---TCMTSVPLIL-DRIS---KGINDKVNSGsafkkslfkflyqykvkwvqrgyktplidkl 428
Cdd:PLN02860 249 AKAALQ--------AIKQhnvTSMITVPAMMaDLISltrKSMTWKVFPS------------------------------- 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 429 vfkkvaklmggkVRIIMSGGAPLSAD-THEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTygrtggpLTVCDIRLVNW 507
Cdd:PLN02860 290 ------------VRKILNGGGSLSSRlLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPT-------LESPKQTLQTV 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 508 EEGNYRVTN--------KPYPQGEVLIG-------------GECVSQGYYKLPGKTNEDFfEEDGqrWFKTGDIGEIQAD 566
Cdd:PLN02860 351 NQTKSSSVHqpqgvcvgKPAPHVELKIGldessrvgriltrGPHVMLGYWGQNSETASVL-SNDG--WLDTGDIGWIDKA 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 567 GVLKIIDRKKDLVKlQAGEYVSLGKVESEL-KTCGIIENIcVYGDPTKQYT---VALVVPNQN----HLEELAQKHGLgd 638
Cdd:PLN02860 428 GNLWLIGRSNDRIK-TGGENVYPEEVEAVLsQHPGVASVV-VVGVPDSRLTemvVACVRLRDGwiwsDNEKENAKKNL-- 503
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24586634 639 ksfeELCSSpiiekaILKeiaEHARKCKLQKYEVPAAITLCKEVWSpdmglVTAAFKLKRKDIQ 702
Cdd:PLN02860 504 ----TLSSE------TLR---HHCREKNLSRFKIPKLFVQWRKPFP-----LTTTGKIRRDEVR 549
|
|
| PRK08974 |
PRK08974 |
long-chain-fatty-acid--CoA ligase FadD; |
256-579 |
3.12e-19 |
|
long-chain-fatty-acid--CoA ligase FadD;
Pssm-ID: 236359 [Multi-domain] Cd Length: 560 Bit Score: 92.04 E-value: 3.12e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 256 FNQVVKTGQdsKFEHVPP--KGDDIAIIMYTSGSTGTPKGVLLSHKNCIATM---KGFVDMVPIYPDDVLIGFLPLAHVF 330
Cdd:PRK08974 186 FRSALHKGR--RMQYVKPelVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLeqaKAAYGPLLHPGKELVVTALPLYHIF 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 331 ELVAEsvCLMTgVPIGySTPLtLIDTSSKIkrgckgDATV--LKP---TCMTSVPLILdriskgiNDKVNSgSAFKKSLF 405
Cdd:PRK08974 264 ALTVN--CLLF-IELG-GQNL-LITNPRDI------PGFVkeLKKypfTAITGVNTLF-------NALLNN-EEFQELDF 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 406 KFLyqykvkwvqrgyktplidklvfkkvaklmggkvRIIMSGGAPLS---ADTHEQIKTClclELIQGYGLTETTSGATV 482
Cdd:PRK08974 325 SSL---------------------------------KLSVGGGMAVQqavAERWVKLTGQ---YLLEGYGLTECSPLVSV 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 483 MDYRDMTY-GRTGGPLTVCDIRLVNwEEGNYRVTNKPypqGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIG 561
Cdd:PRK08974 369 NPYDLDYYsGSIGLPVPSTEIKLVD-DDGNEVPPGEP---GELWVKGPQVMLGYWQRPEATDEVI--KDG--WLATGDIA 440
|
330
....*....|....*...
gi 24586634 562 EIQADGVLKIIDRKKDLV 579
Cdd:PRK08974 441 VMDEEGFLRIVDRKKDMI 458
|
|
| BCL_like |
cd05919 |
Benzoate CoA ligase (BCL) and similar adenylate forming enzymes; This family contains benzoate ... |
264-697 |
3.52e-19 |
|
Benzoate CoA ligase (BCL) and similar adenylate forming enzymes; This family contains benzoate CoA ligase (BCL) and related ligases that catalyze the acylation of benzoate derivatives, 2-aminobenzoate and 4-hydroxybenzoate. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Xenobiotic aromatic compounds are also a major class of man-made pollutants. Some bacteria use benzoate as the sole source of carbon and energy through benzoate degradation. Benzoate degradation starts with its activation to benzoyl-CoA by benzoate CoA ligase. The reaction catalyzed by benzoate CoA ligase proceeds via a two-step process; the first ATP-dependent step forms an acyl-AMP intermediate, and the second step forms the acyl-CoA ester with release of the AMP.
Pssm-ID: 341243 [Multi-domain] Cd Length: 436 Bit Score: 90.98 E-value: 3.52e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 264 QDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGF-VDMVPIYPDDVLIG--------------FLPLAh 328
Cdd:cd05919 79 RDCEARLVVTSADDIAYLLYSSGTTGPPKGVMHAHRDPLLFADAMaREALGLTPGDRVFSsakmffgyglgnslWFPLA- 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 329 vfelVAESVCLMTGVPigysTPLTLIDTSSKikrgckgdatvLKPTCMTSVPLILDRIskgINDKVNSGSAFKKslfkfl 408
Cdd:cd05919 158 ----VGASAVLNPGWP----TAERVLATLAR-----------FRPTVLYGVPTFYANL---LDSCAGSPDALRS------ 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 409 yqykvkwvqrgyktplidklvfkkvaklmggkVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETtsGATVMDYR-- 486
Cdd:cd05919 210 --------------------------------LRLCVSAGEALPRGLGERWMEHFGGPILDGIGATEV--GHIFLSNRpg 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 487 DMTYGRTGGPLTVCDIRLVNwEEGNyrvTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFFEEdgqrWFKTGDIGEIQAD 566
Cdd:cd05919 256 AWRLGSTGRPVPGYEIRLVD-EEGH---TIPPGEEGDLLVRGPSAAVGYWNNPEKSRATFNGG----WYRTGDKFCRDAD 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 567 GVLKIIDRKKDLVKLqAGEYVSLGKVESelktcgiieniCVYGDPTKQYTVALVVPNQNHLEELaqkhglgdKSFEELCS 646
Cdd:cd05919 328 GWYTHAGRADDMLKV-GGQWVSPVEVES-----------LIIQHPAVAEAAVVAVPESTGLSRL--------TAFVVLKS 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 24586634 647 SPIIEKAILKEIAEHARKcKLQKYEVPAAITLCKEVWSPDMGLVtAAFKLK 697
Cdd:cd05919 388 PAAPQESLARDIHRHLLE-RLSAHKVPRRIAFVDELPRTATGKL-QRFKLR 436
|
|
| ACLS-CaiC |
cd17637 |
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; This family contains fatty acid CoA ... |
277-618 |
3.60e-19 |
|
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; This family contains fatty acid CoA ligases, including acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, most of which are yet to be characterized, but may be similar to Carnitine-CoA ligase (CaiC) which catalyzes the transfer of CoA to carnitine. Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341292 [Multi-domain] Cd Length: 333 Bit Score: 89.25 E-value: 3.60e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGvpiGYSTPLTLIDT 356
Cdd:cd17637 1 DPFVIIHTAAVAGRPRGAVLSHGNLIAANLQLIHAMGLTEADVYLNMLPLFHIAGLNLALATFHAG---GANVVMEKFDP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 357 SSKIKRGCKGDATVlkptcMTSVPLILDRISkginDKVNSGSAFKKSLfkflyqykvkwvqrgyktplidklvfkkvakl 436
Cdd:cd17637 78 AEALELIEEEKVTL-----MGSFPPILSNLL----DAAEKSGVDLSSL-------------------------------- 116
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 437 mggkvRIIMSGGAPlsaDTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTyGRTGGPLTVCDIRLVNwEEGNyrvtn 516
Cdd:cd17637 117 -----RHVLGLDAP---ETIQRFEETTGATFWSLYGQTETSGLVTLSPYRERP-GSAGRPGPLVRVRIVD-DNDR----- 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 517 kPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRK--KDLVKlQAGEYVSLGK 591
Cdd:cd17637 182 -PVPAgetGEIVVRGPLVFQGYWNLPELTAYTF--RNG--WHHTGDLGRFDEDGYLWYAGRKpeKELIK-PGGENVYPAE 255
|
330 340
....*....|....*....|....*..
gi 24586634 592 VESELKTCGIIENICVYGDPTKQYTVA 618
Cdd:cd17637 256 VEKVILEHPAIAEVCVIGVPDPKWGEG 282
|
|
| PRK06814 |
PRK06814 |
acyl-[ACP]--phospholipid O-acyltransferase; |
231-682 |
7.22e-19 |
|
acyl-[ACP]--phospholipid O-acyltransferase;
Pssm-ID: 235865 [Multi-domain] Cd Length: 1140 Bit Score: 91.57 E-value: 7.22e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 231 TIIYIEDqLQKTETTGFKEGVKILPFNQVVKTGQdskfehvpPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVD 310
Cdd:PRK06814 757 RIIYLED-VRAQIGLADKIKGLLAGRFPLVYFCN--------RDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA 827
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 311 MVPIYPDDVLIGFLPLAHVFELVAESVC-LMTGVPIG-YSTPL------TLI-DTsskikrgckgDATVLKPTcmtsvpl 381
Cdd:PRK06814 828 RIDFSPEDKVFNALPVFHSFGLTGGLVLpLLSGVKVFlYPSPLhyriipELIyDT----------NATILFGT------- 890
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 382 ildriskginDKVNSGSAFKKSLFKFLyqykvkwvqrgyktplidklvfkkvaklmggKVRIIMSGGAPLSADTHEQIKT 461
Cdd:PRK06814 891 ----------DTFLNGYARYAHPYDFR-------------------------------SLRYVFAGAEKVKEETRQTWME 929
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 462 CLCLELIQGYGLTETT---SGATVMDYRDMTYGRTggpLTVCDIRLV---NWEEGnyrvtnkpypqGEVLIGGECVSQGY 535
Cdd:PRK06814 930 KFGIRILEGYGVTETApviALNTPMHNKAGTVGRL---LPGIEYRLEpvpGIDEG-----------GRLFVRGPNVMLGY 995
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 536 YKL--PGktnedFFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVESelktcgIIENIcvygDPTK 613
Cdd:PRK06814 996 LRAenPG-----VLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKI-AGEMISLAAVEE------LAAEL----WPDA 1059
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24586634 614 QyTVALVVPNQNHLEELAQkhglgdksfeeLCSSPIIEKAilkEIAEHARKCKLQKYEVPAAITLCKEV 682
Cdd:PRK06814 1060 L-HAAVSIPDARKGERIIL-----------LTTASDATRA---AFLAHAKAAGASELMVPAEIITIDEI 1113
|
|
| PRK06145 |
PRK06145 |
acyl-CoA synthetase; Validated |
269-623 |
1.07e-18 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 102207 [Multi-domain] Cd Length: 497 Bit Score: 89.95 E-value: 1.07e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 269 EHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHV--FELVAESVCLMTGVpig 346
Cdd:PRK06145 142 PQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVgaFDLPGIAVLWVGGT--- 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 347 ystpltlidtsSKIKRGCKGDATVL-----KPTCMTSVPLILDRI-SKGINDKVNSGSafkkslfkflyqykVKW-VQRG 419
Cdd:PRK06145 219 -----------LRIHREFDPEAVLAaierhRLTCAWMAPVMLSRVlTVPDRDRFDLDS--------------LAWcIGGG 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 420 YKTPLIDKLVFKKVakLMGGKvriimsggaplsadtheqiktclcleLIQGYGLTETTSGATVMDY-RDM-TYGRTGGPL 497
Cdd:PRK06145 274 EKTPESRIRDFTRV--FTRAR--------------------------YIDAYGLTETCSGDTLMEAgREIeKIGSTGRAL 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 TVCDIRLVNwEEGNYRVTNKpypQGEVLIGGECVSQGYYKLPGKTNEDFFEEdgqrWFKTGDIGEIQADGVLKIIDRKKD 577
Cdd:PRK06145 326 AHVEIRIAD-GAGRWLPPNM---KGEICMRGPKVTKGYWKDPEKTAEAFYGD----WFRSGDVGYLDEEGFLYLTDRKKD 397
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 24586634 578 LVkLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQY---TVALVVPN 623
Cdd:PRK06145 398 MI-ISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWgerITAVVVLN 445
|
|
| PRK12467 |
PRK12467 |
peptide synthase; Provisional |
250-624 |
3.59e-18 |
|
peptide synthase; Provisional
Pssm-ID: 237108 [Multi-domain] Cd Length: 3956 Bit Score: 89.84 E-value: 3.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 250 GVKILPFNQVVKTGQDSKFEHVPPK--GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLA 327
Cdd:PRK12467 628 GLRSLCLDEPADLLCGYSGHNPEVAldPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFA 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 328 HVFELVAESVCLMTGVPIGYSTPLTLIDTSSKIKRGCKGDATVLKptcmtSVPlildriskgindkvnsgsafkkSLFKF 407
Cdd:PRK12467 708 FDLGVTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLK-----IVP----------------------SHLQA 760
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 408 LYQYKVKWVQRGYKTPLIdklvfkkvaklmggkvriimsGGAPLSADTHEQIKTC-LCLELIQGYGLTETTSGATVMDY- 485
Cdd:PRK12467 761 LLQASRVALPRPQRALVC---------------------GGEALQVDLLARVRALgPGARLINHYGPTETTVGVSTYELs 819
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 486 ---RDMTYGRTGGPLTvcdirlvnwEEGNYRVTN--KPYP---QGEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQR 553
Cdd:PRK12467 820 deeRDFGNVPIGQPLA---------NLGLYILDHylNPVPvgvVGELYIGGAGLARGYHRRPALTAERFvpdpFGADGGR 890
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24586634 554 WFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIEN---ICVYGDPTKQYtVALVVPNQ 624
Cdd:PRK12467 891 LYRTGDLARYRADGVIEYLGRMDHQVKIR-GFRIELGEIEARLLAQPGVREavvLAQPGDAGLQL-VAYLVPAA 962
|
|
| PRK06839 |
PRK06839 |
o-succinylbenzoate--CoA ligase; |
271-682 |
4.10e-18 |
|
o-succinylbenzoate--CoA ligase;
Pssm-ID: 168698 [Multi-domain] Cd Length: 496 Bit Score: 87.99 E-value: 4.10e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHV--FELVAESVCLMTGVPI--G 346
Cdd:PRK06839 144 VEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIggIGLFAFPTLFAGGVIIvpR 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 347 YSTP---LTLIDTSskikrgckgdatvlKPTCMTSVPLILDRISKGINdkvnsgsafkkslfkflyqykvkwvqrgYKTP 423
Cdd:PRK06839 224 KFEPtkaLSMIEKH--------------KVTVVMGVPTIHQALINCSK----------------------------FETT 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 424 LIDKlvfkkvaklmggkVRIIMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATVMDYRDMTY--GRTGGPLTVCD 501
Cdd:PRK06839 262 NLQS-------------VRWFYNGGAPCPEELMREFID-RGFLFGQGFGMTETSPTVFMLSEEDARRkvGSIGKPVLFCD 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 502 IRLVNWEEGNYrvtnKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkL 581
Cdd:PRK06839 328 YELIDENKNKV----EVGEVGELLIRGPNVMKEYWNRPDATEETI--QDG--WLCTGDLARVDEDGFVYIVGRKKEMI-I 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 582 QAGEYVSLGKVESELKTCGIIENICVYGDPTKQY---TVALVVPNQnhleelaqkhglgdksfeelcSSPIIEkailKEI 658
Cdd:PRK06839 399 SGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWgeiPIAFIVKKS---------------------SSVLIE----KDV 453
|
410 420
....*....|....*....|....
gi 24586634 659 AEHARKcKLQKYEVPAAITLCKEV 682
Cdd:PRK06839 454 IEHCRL-FLAKYKIPKEIVFLKEL 476
|
|
| PRK13295 |
PRK13295 |
cyclohexanecarboxylate-CoA ligase; Reviewed |
273-626 |
6.09e-18 |
|
cyclohexanecarboxylate-CoA ligase; Reviewed
Pssm-ID: 171961 [Multi-domain] Cd Length: 547 Bit Score: 87.80 E-value: 6.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 273 PKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHvfelvaesvclMTGVPIGYSTPLT 352
Cdd:PRK13295 194 PGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAH-----------QTGFMYGLMMPVM 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 353 LidtsskikrgckGDATVLKPTCmtSVPLILDRI-SKGINDKVNSgsafkkslfkflyqykvkwvqrgykTPLIDKLVfk 431
Cdd:PRK13295 263 L------------GATAVLQDIW--DPARAAELIrTEGVTFTMAS-------------------------TPFLTDLT-- 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 432 KVAKLMGGKV---RIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTET--TSGATVMDYRDMTYGRTGGPLTVCDIRLVN 506
Cdd:PRK13295 302 RAVKESGRPVsslRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENgaVTLTKLDDPDERASTTDGCPLPGVEVRVVD 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 507 weegnyrVTNKPYPQGE---VLIGGECVSQGYYKLPGKTNEDFfeeDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQA 583
Cdd:PRK13295 382 -------ADGAPLPAGQigrLQVRGCSNFGGYLKRPQLNGTDA---DG--WFDTGDLARIDADGYIRISGRSKDVI-IRG 448
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 24586634 584 GEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVPNQNH 626
Cdd:PRK13295 449 GENIPVVEIEALLYRHPAIAQVAIVAYPDErlgERACAFVVPRPGQ 494
|
|
| A_NRPS_Sfm_like |
cd12115 |
The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene ... |
264-622 |
7.39e-18 |
|
The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae; The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the saframycin A gene cluster from Streptomyces lavendulae which implicates the NRPS system for assembling the unusual tetrapeptidyl skeleton in an iterative manner. It also includes saframycin Mx1 produced by Myxococcus xanthus NRPS.
Pssm-ID: 341280 [Multi-domain] Cd Length: 447 Bit Score: 86.99 E-value: 7.39e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 264 QDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDmvpIYPDDVLIGFLPLA------HVFELVAEsv 337
Cdd:cd12115 93 EDAQARLVLTDPDDLAYVIYTSGSTGRPKGVAIEHRNAAAFLQWAAA---AFSAEELAGVLASTsicfdlSVFELFGP-- 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 338 cLMTG---VPIgySTPLTLIDTSSKikrgckGDATVLkptcmTSVPlildriskgindkvnsgSAFKkSLFKflyqykvk 414
Cdd:cd12115 168 -LATGgkvVLA--DNVLALPDLPAA------AEVTLI-----NTVP-----------------SAAA-ELLR-------- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 415 wvqrgyktplIDKLVfkkvaklmgGKVRIIMSGGAPLSADTHEQIKTCLCLELIQG-YGLTETTSGATVM-----DYRDM 488
Cdd:cd12115 208 ----------HDALP---------ASVRVVNLAGEPLPRDLVQRLYARLQVERVVNlYGPSEDTTYSTVApvppgASGEV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 489 TYGRTGGPLTVcdirLVNWEEGNyrvtnkPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFF---EEDGQRWFKTGDIGE 562
Cdd:cd12115 269 SIGRPLANTQA----YVLDRALQ------PVPLgvpGELYIGGAGVARGYLGRPGLTAERFLpdpFGPGARLYRTGDLVR 338
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24586634 563 IQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICV--YGD-PTKQYTVALVVP 622
Cdd:cd12115 339 WRPDGLLEFLGRADNQVKVR-GFRIELGEIEAALRSIPGVREAVVvaIGDaAGERRLVAYIVA 400
|
|
| A_NRPS_MycA_like |
cd05908 |
The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin ... |
276-579 |
9.91e-18 |
|
The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA); The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPS similar to mycosubtilin synthase subunit A (MycA). Mycosubtilin, which is characterized by a beta-amino fatty acid moiety linked to the circular heptapeptide Asn-Tyr-Asn-Gln-Pro-Ser-Asn, belongs to the iturin family of lipopeptide antibiotics. The mycosubtilin synthase subunit A (MycA) combines functional domains derived from peptide synthetases, amino transferases, and fatty acid synthases. Nonribosomal peptide synthetases are large multifunction enzymes that synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341234 [Multi-domain] Cd Length: 499 Bit Score: 86.77 E-value: 9.91e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVA-ESVCLMTGVpigystPLTLI 354
Cdd:cd05908 106 DELAFIQFSSGSTGDPKGVMLTHENLVHNMFAILNSTEWKTKDRILSWMPLTHDMGLIAfHLAPLIAGM------NQYLM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 DTSSKIKRgckgdatvlkPTcmtsvpLILDRISKginDKVNSGSAfkkslFKFLYQYkvkwvqrgyktpLIDKLVFKKVA 434
Cdd:cd05908 180 PTRLFIRR----------PI------LWLKKASE---HKATIVSS-----PNFGYKY------------FLKTLKPEKAN 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 435 KLMGGKVRIIMSGGAPLSAD-THEQIKTCLCLELIQG-----YGLTETTSGATV-----------MDYRDMTYGR----- 492
Cdd:cd05908 224 DWDLSSIRMILNGAEPIDYElCHEFLDHMSKYGLKRNailpvYGLAEASVGASLpkaqspfktitLGRRHVTHGEpepev 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 493 ------------TGGPLTVCDIRLVNWEegnyrvtNKPYPQ---GEVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWFKT 557
Cdd:cd05908 304 dkkdsecltfveVGKPIDETDIRICDED-------NKILPDgyiGHIQIRGKNVTPGYYNNPEATAK-VFTDDG--WLKT 373
|
330 340
....*....|....*....|..
gi 24586634 558 GDIGEIQaDGVLKIIDRKKDLV 579
Cdd:cd05908 374 GDLGFIR-NGRLVITGREKDII 394
|
|
| ttLC_FACS_AEE21_like |
cd12118 |
Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis; This ... |
256-596 |
1.07e-17 |
|
Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis; This family includes fatty acyl-CoA synthetases that can activate medium to long-chain fatty acids. These enzymes catalyze the ATP-dependent acylation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. The fatty acyl-CoA synthetase from Thermus thermophiles in this family has been shown to catalyze the long-chain fatty acid, myristoyl acid. Also included in this family are acyl activating enzymes from Arabidopsis, which contains a large number of proteins from this family with up to 63 different genes, many of which are uncharacterized.
Pssm-ID: 341283 [Multi-domain] Cd Length: 486 Bit Score: 86.58 E-value: 1.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 256 FNQVVKTGqDSKFEHVPPKGDDIAIIM-YTSGSTGTPKGVLLSHK----NCIATMKGF-VDMVPIYpddvlIGFLPLAH- 328
Cdd:cd12118 113 YEDLLAEG-DPDFEWIPPADEWDPIALnYTSGTTGRPKGVVYHHRgaylNALANILEWeMKQHPVY-----LWTLPMFHc 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 329 --------VFELVAESVCLMTgvpIGYSTPLTLIDTsskikrgckgdatvLKPTCMTSVPLILDRIskgindkVNSGSAF 400
Cdd:cd12118 187 ngwcfpwtVAAVGGTNVCLRK---VDAKAIYDLIEK--------------HKVTHFCGAPTVLNML-------ANAPPSD 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 401 KKSLfkflyqykvkwvqrgyktplidklvfkkvaklmGGKVRIiMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGA 480
Cdd:cd12118 243 ARPL---------------------------------PHRVHV-MTAGAPPPAAVLAKMEE-LGFDVTHVYGLTETYGPA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 481 TV-----------MDYRDMTYGRTG------GPLTVCDirlvnweegnyRVTNKPYPQ-----GEVLIGGECVSQGYYKL 538
Cdd:cd12118 288 TVcawkpewdelpTEERARLKARQGvryvglEEVDVLD-----------PETMKPVPRdgktiGEIVFRGNIVMKGYLKN 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 539 PGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESEL 596
Cdd:cd12118 357 PEATAEAF--RGG--WFHSGDLAVIHPDGYIEIKDRSKDII-ISGGENISSVEVEGVL 409
|
|
| A_NRPS_AB3403-like |
cd17646 |
Peptide Synthetase; The adenylation (A) domain of NRPS recognizes a specific amino acid or ... |
271-632 |
1.82e-17 |
|
Peptide Synthetase; The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341301 [Multi-domain] Cd Length: 488 Bit Score: 85.79 E-value: 1.82e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLA---HVFELVaesVCLMTG----- 342
Cdd:cd17646 133 VPPRPDNLAYVIYTSGSTGRPKGVMVTHAGIVNRLLWMQDEYPLGPGDRVLQKTPLSfdvSVWELF---WPLVAGarlvv 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 343 -VPIGYSTPLTLIDTsskIKRGCkgdatVlkpTCMTSVPLILDriskgindkvnsgsAFkkslfkflyqykVKWVQRGYK 421
Cdd:cd17646 210 aRPGGHRDPAYLAAL---IREHG-----V---TTCHFVPSMLR--------------VF------------LAEPAAGSC 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 422 TPLidklvfkkvaklmggkvRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGRT---GGPLT 498
Cdd:cd17646 253 ASL-----------------RRVFCSGEALPPELAARFLALPGAELHNLYGPTEAAIDVTHWPVRGPAETPSvpiGRPVP 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 499 VCDIRLVNwEEGNyrvtnkPYPQ---GEVLIGGECVSQGYYKLPGKTNEDF----FeEDGQRWFKTGDIGEIQADGVLKI 571
Cdd:cd17646 316 NTRLYVLD-DALR------PVPVgvpGELYLGGVQLARGYLGRPALTAERFvpdpF-GPGSRMYRTGDLARWRPDGALEF 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24586634 572 IDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVY---GDPTKQYTVALVVPNQNHLEELAQ 632
Cdd:cd17646 388 LGRSDDQVKIR-GFRVEPGEIEAALAAHPAVTHAVVVaraAPAGAARLVGYVVPAAGAAGPDTA 450
|
|
| PRK12467 |
PRK12467 |
peptide synthase; Provisional |
249-699 |
3.48e-17 |
|
peptide synthase; Provisional
Pssm-ID: 237108 [Multi-domain] Cd Length: 3956 Bit Score: 86.75 E-value: 3.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 249 EGVKILPFNQV--VKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPL 326
Cdd:PRK12467 1689 DGLRSLVLDQEddWLEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSF 1768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 327 A---HVFELVAEsvcLMTGVPIGYSTPLTLIDTSSKIKRGCKGDATVLKptcmtsvplildriskgindkvnsgsaFKKS 403
Cdd:PRK12467 1769 AfdvSVWELFWP---LINGARLVIAPPGAHRDPEQLIQLIERQQVTTLH---------------------------FVPS 1818
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 404 LFKFLYQykvkwVQRGYKTPLidklvfkkvaklmggKVRIIMSGGAPLSADTHEQIKTCL-CLELIQGYGLTETTSGAT- 481
Cdd:PRK12467 1819 MLQQLLQ-----MDEQVEHPL---------------SLRRVVCGGEALEVEALRPWLERLpDTGLFNLYGPTETAVDVTh 1878
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 482 -VMDYRDMTyGRTGGPLTVCDIRLvnweeGNYRVTNKPYPQ-----GEVLIGGECVSQGYYKLPGKTNEDF----FEEDG 551
Cdd:PRK12467 1879 wTCRRKDLE-GRDSVPIGQPIANL-----STYILDASLNPVpigvaGELYLGGVGLARGYLNRPALTAERFvadpFGTVG 1952
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 552 QRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVY---GDPTKQYtVALVVPNqnhle 628
Cdd:PRK12467 1953 SRLYRTGDLARYRADGVIEYLGRIDHQVKIR-GFRIELGEIEARLREQGGVREAVVIaqdGANGKQL-VAYVVPT----- 2025
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24586634 629 elaqkhglgDKSFEELCSSPIIEKAILKEiaehARKCKLQKYEVPAAITLCKEVwsPdmglVTAAFKLKRK 699
Cdd:PRK12467 2026 ---------DPGLVDDDEAQVALRAILKN----HLKASLPEYMVPAHLVFLARM--P----LTPNGKLDRK 2077
|
|
| A_NRPS_ApnA-like |
cd17644 |
similar to adenylation domain of anabaenopeptin synthetase (ApnA); This family of the ... |
264-632 |
4.10e-17 |
|
similar to adenylation domain of anabaenopeptin synthetase (ApnA); This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes Planktothrix agardhii anabaenopeptin synthetase (ApnA A1), which is capable of activating two chemically distinct amino acids (Arg and Tyr). Structural studies show that the architecture of the active site forces Arg to adopt a Tyr-like conformation, thus explaining the bispecificity. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341299 [Multi-domain] Cd Length: 465 Bit Score: 84.79 E-value: 4.10e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 264 QDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELVAESVCLmtgv 343
Cdd:cd17644 94 EDAQISVLLTQPENLAYVIYTSGSTGKPKGVMIEHQSLVNLSHGLIKEYGITSSDRVLQFASIA--FDVAAEEIYV---- 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 344 pigystplTLidtsskikrgCKGDATVLKPTCM-TSVPLILDRISKgindkvnsgsaFKKSLFKFLYQYKVKWVQRGYKT 422
Cdd:cd17644 168 --------TL----------LSGATLVLRPEEMrSSLEDFVQYIQQ-----------WQLTVLSLPPAYWHLLVLELLLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 423 --PLIDKLvfkkvaklmggkvRIIMSGGAPLSADTHEQIKTCLC--LELIQGYGLTETTSGATVMDYRDMTYGRT----- 493
Cdd:cd17644 219 tiDLPSSL-------------RLVIVGGEAVQPELVRQWQKNVGnfIQLINVYGPTEATIAATVCRLTQLTERNItsvpi 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 494 GGPLT-----VCDIRLvnweegnyrvtnKPYP---QGEVLIGGECVSQGYYKLPGKTNEDF----FEE-DGQRWFKTGDI 560
Cdd:cd17644 286 GRPIAntqvyILDENL------------QPVPvgvPGELHIGGVGLARGYLNRPELTAEKFishpFNSsESERLYKTGDL 353
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 561 GEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVYG--DPTKQ-YTVALVVP---NQNHLEELAQ 632
Cdd:cd17644 354 ARYLPDGNIEYLGRIDNQVKIR-GFRIELGEIEAVLSQHNDVKTAVVIVreDQPGNkRLVAYIVPhyeESPSTVELRQ 430
|
|
| PRK06155 |
PRK06155 |
crotonobetaine/carnitine-CoA ligase; Provisional |
133-596 |
4.97e-17 |
|
crotonobetaine/carnitine-CoA ligase; Provisional
Pssm-ID: 235719 [Multi-domain] Cd Length: 542 Bit Score: 84.81 E-value: 4.97e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 133 WKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCF---KQAMPIVTVY--ATLgddgvAHCITETEVT 207
Cdd:PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAwlgAIAVPINTALrgPQL-----EHILRNSGAR 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 208 TVITSHDLLPKFKTLLDK-CPLVKTIIYIEDQLQKTETtgfkeGVKILPFNQVvktgqDSKFEHVPPKGDDIAIIMYTSG 286
Cdd:PRK06155 121 LLVVEAALLAALEAADPGdLPLPAVWLLDAPASVSVPA-----GWSTAPLPPL-----DAPAPAAAVQPGDTAAILYTSG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 287 STGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGvpigystpltlidtsskikrgckg 366
Cdd:PRK06155 191 TTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLAG------------------------ 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 367 dAT-VLKPtcmtsvplildRISkgindkvnsGSAFKKSLFKflYQYKVKWVQrGYKTPLIDKLvfKKVAKLMGGKVRIIM 445
Cdd:PRK06155 247 -ATyVLEP-----------RFS---------ASGFWPAVRR--HGATVTYLL-GAMVSILLSQ--PARESDRAHRVRVAL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 446 SGGAPlsADTHEQIKTCLCLELIQGYGLTETTS--GATVMDYRDMTYGRTGGPLTvcdIRLVNwEEGNyrvtnkPYPQGE 523
Cdd:PRK06155 301 GPGVP--AALHAAFRERFGVDLLDGYGSTETNFviAVTHGSQRPGSMGRLAPGFE---ARVVD-EHDQ------ELPDGE 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 524 VligGECV---------SQGYYKLPGKTNEDFfeedGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVES 594
Cdd:PRK06155 369 P---GELLlradepfafATGYFGMPEKTVEAW----RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRR-GENISSFEVEQ 440
|
..
gi 24586634 595 EL 596
Cdd:PRK06155 441 VL 442
|
|
| A_NRPS_GliP_like |
cd17653 |
nonribosomal peptide synthase GliP-like; This family includes the adenylation (A) domain of ... |
258-596 |
6.31e-17 |
|
nonribosomal peptide synthase GliP-like; This family includes the adenylation (A) domain of nonribosomal peptide synthases (NRPS) gliotoxin biosynthesis protein P (GliP), thioclapurine biosynthesis protein P (tcpP) and Sirodesmin biosynthesis protein P (SirP). In the filamentous fungus Aspergillus fumigatus, NRPS GliP is involved in the biosynthesis of gliotoxin, which is initiated by the condensation of serine and phenylalanine. Studies show that GliP is not required for invasive aspergillosis, suggesting that the principal targets of gliotoxin are neutrophils or other phagocytes. SirP is a phytotoxin produced by the fungus Leptosphaeria maculans, which causes blackleg disease of canola (Brassica napus). In the fungus Claviceps purpurea, NRPS tcpP catalyzes condensation of tyrosine and glycine, part of biosynthesis of an unusual class of epipolythiodioxopiperazines (ETPs) that lacks the reactive thiol group for toxicity. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341308 [Multi-domain] Cd Length: 433 Bit Score: 83.90 E-value: 6.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 258 QVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELVAESV 337
Cdd:cd17653 87 QAILRTSGATLLLTTDSPDDLAYIIFTSGSTGIPKGVMVPHRGVLNYVSQPPARLDVGPGSRVAQVLSIA--FDACIGEI 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 338 --CLMTGVPIGYSTPLtliDTSSKIKRGCkgDATVLKPTCMTSVPLildriskgindkvnsgsafkkslfkflyqykvkw 415
Cdd:cd17653 165 fsTLCNGGTLVLADPS---DPFAHVARTV--DALMSTPSILSTLSP---------------------------------- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 416 vqRGYKTplidklvfkkvaklmggkVRIIMSGGAPLSADTHEQIKTCLCLelIQGYGLTETTSGATVMDYRDMTYGRTGG 495
Cdd:cd17653 206 --QDFPN------------------LKTIFLGGEAVPPSLLDRWSPGRRL--YNAYGPTECTISSTMTELLPGQPVTIGK 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 496 PLTVCDIRLVnwEEGNYRVtnkPYPQ-GEVLIGGECVSQGYYKLPGKTNEDFFE---EDGQRWFKTGDIGEIQADGVLKI 571
Cdd:cd17653 264 PIPNSTCYIL--DADLQPV---PEGVvGEICISGVQVARGYLGNPALTASKFVPdpfWPGSRMYRTGDYGRWTEDGGLEF 338
|
330 340
....*....|....*....|....*
gi 24586634 572 IDRKKDLVKLQaGEYVSLGKVESEL 596
Cdd:cd17653 339 LGREDNQVKVR-GFRINLEEIEEVV 362
|
|
| PRK12582 |
PRK12582 |
acyl-CoA synthetase; Provisional |
121-714 |
7.67e-17 |
|
acyl-CoA synthetase; Provisional
Pssm-ID: 237144 [Multi-domain] Cd Length: 624 Bit Score: 84.71 E-value: 7.67e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 121 RVF-KKYNLGDYKWK--TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTV---YATLgd 194
Cdd:PRK12582 65 RPWlAQREPGHGQWRkvTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVspaYSLM-- 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 195 dgvahcitetevttvitSHDLLpKFKTLLDkcpLVK-TIIYIED-----------QLQKTE---TTGFKEGVKILPFNQV 259
Cdd:PRK12582 143 -----------------SHDHA-KLKHLFD---LVKpRVVFAQSgapfaralaalDLLDVTvvhVTGPGEGIASIAFADL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 260 VKT----GQDSKFEHVPPkgDDIAIIMYTSGSTGTPKGVLLSHKN-C--IATMKGFVDMVPIYPDDVLIGFLPLAHVFEL 332
Cdd:PRK12582 202 AATpptaAVAAAIAAITP--DTVAKYLFTSGSTGMPKAVINTQRMmCanIAMQEQLRPREPDPPPPVSLDWMPWNHTMGG 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 333 VAesvcLMTGVPIGYST-------PLT-LIDTSSKIKRGCKgdatvlkPTCMTSVPLILDRISKGI-NDKvnsgsAFKKS 403
Cdd:PRK12582 280 NA----NFNGLLWGGGTlyiddgkPLPgMFEETIRNLREIS-------PTVYGNVPAGYAMLAEAMeKDD-----ALRRS 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 404 LFKflyqykvkwvqrgyktplidklvfkkvaklmggKVRIIMSGGAPLSADTHEQIK------TCLCLELIQGYGLTETt 477
Cdd:PRK12582 344 FFK---------------------------------NLRLMAYGGATLSDDLYERMQalavrtTGHRIPFYTGYGATET- 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 478 SGATVMDYRDMT-YGRTGGPLTVCDIRLVnweegnyrvtnkpyPQG---EVLIGGECVSQGYYKLPGKTnEDFFEEDGqr 553
Cdd:PRK12582 390 APTTTGTHWDTErVGLIGLPLPGVELKLA--------------PVGdkyEVRVKGPNVTPGYHKDPELT-AAAFDEEG-- 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 554 WFKTGDIGEI--QADGVLKII--DRKKDLVKLQAGEYVSLGKVESE-LKTC-GIIENICVYGDpTKQYTVALVVPNQNHL 627
Cdd:PRK12582 453 FYRLGDAARFvdPDDPEKGLIfdGRVAEDFKLSTGTWVSVGTLRPDaVAACsPVIHDAVVAGQ-DRAFIGLLAWPNPAAC 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 628 EELAQKHglgDKSFEELCSSPIIeKAILKE-IAEHARKCKLQKYEVpAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQ 706
Cdd:PRK12582 532 RQLAGDP---DAAPEDVVKHPAV-LAILREgLSAHNAEAGGSSSRI-ARALLMTEPPSIDAGEITDKGYINQRAVLERRA 606
|
....*...
gi 24586634 707 HDINRMYA 714
Cdd:PRK12582 607 ALVERLYA 614
|
|
| PRK12316 |
PRK12316 |
peptide synthase; Provisional |
257-622 |
9.51e-17 |
|
peptide synthase; Provisional
Pssm-ID: 237054 [Multi-domain] Cd Length: 5163 Bit Score: 85.39 E-value: 9.51e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 257 NQVVKTGQDSKFEHVPPK---GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELV 333
Cdd:PRK12316 3174 VLDLDRGDENYAEANPAIrtmPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGDRVLQFTTFS--FDVF 3251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 334 AESVclmtgvpigySTPLTlidtsskikrgcKGDATVLKPTCMTSVPlildrisKGINDKVNSGSAFkkslfkflyqykv 413
Cdd:PRK12316 3252 VEEL----------FWPLM------------SGARVVLAGPEDWRDP-------ALLVELINSEGVD------------- 3289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 414 kwVQRGYKTPLIDKLVFKKVAKLMGgkVRIIMSGGAPLSADTheQIKTCLCLELIQGYGLTETTSGATVMDYRDMT--YG 491
Cdd:PRK12316 3290 --VLHAYPSMLQAFLEEEDAHRCTS--LKRIVCGGEALPADL--QQQVFAGLPLYNLYGPTEATITVTHWQCVEEGkdAV 3363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 492 RTGGPLTVCDIRLVNweegnyrVTNKPYPQG---EVLIGGECVSQGYYKLPGKTNEDFFEE---DGQRWFKTGDIGEIQA 565
Cdd:PRK12316 3364 PIGRPIANRACYILD-------GSLEPVPVGalgELYLGGEGLARGYHNRPGLTAERFVPDpfvPGERLYRTGDLARYRA 3436
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 566 DGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVYGDPTKQyTVALVVP 622
Cdd:PRK12316 3437 DGVIEYIGRVDHQVKIR-GFRIELGEIEARLLEHPWVREAVVLAVDGRQ-LVAYVVP 3491
|
|
| PRK12316 |
PRK12316 |
peptide synthase; Provisional |
135-622 |
1.36e-16 |
|
peptide synthase; Provisional
Pssm-ID: 237054 [Multi-domain] Cd Length: 5163 Bit Score: 84.62 E-value: 1.36e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQA---MPIVTVYAT------LGDDGVAhcitete 205
Cdd:PRK12316 2030 SYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGgayVPLDPNYPAerlaymLEDSGAA------- 2102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 206 vttvitshdLLPKFKTLLDKCPLvktiiyiedqlqktettgfKEGVKILPFNQVVKTgQDSKFEHVPPK--GDDIAIIMY 283
Cdd:PRK12316 2103 ---------LLLTQRHLLERLPL-------------------PAGVARLPLDRDAEW-ADYPDTAPAVQlaGENLAYVIY 2153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 284 TSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELVAEsvclmtgvpiGYSTPLtlidtsskikrg 363
Cdd:PRK12316 2154 TSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFS--FDGAHE----------QWFHPL------------ 2209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 364 CKGDATVLKPTCMTSVPLILDRISK-GIndkvnSGSAFKKSlfkFLYQYkVKWVQRGYKTPlidklvfkkvaklmggKVR 442
Cdd:PRK12316 2210 LNGARVLIRDDELWDPEQLYDEMERhGV-----TILDFPPV---YLQQL-AEHAERDGRPP----------------AVR 2264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 443 IIMSGGAPLSADTHEQIKTCLCLE-LIQGYGLTETTSGATVMDYR-----DMTYGRTGGPLT-----VCDIRLvnweegn 511
Cdd:PRK12316 2265 VYCFGGEAVPAASLRLAWEALRPVyLFNGYGPTEAVVTPLLWKCRpqdpcGAAYVPIGRALGnrrayILDADL------- 2337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 512 yrvtnKPYPQ---GEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaG 584
Cdd:PRK12316 2338 -----NLLAPgmaGELYLGGEGLARGYLNRPGLTAERFvpdpFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIR-G 2411
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 24586634 585 EYVSLGKVESELKTC-GIIENICVYGD-PTKQYTVALVVP 622
Cdd:PRK12316 2412 FRIELGEIEARLQAHpAVREAVVVAQDgASGKQLVAYVVP 2451
|
|
| PRK06334 |
PRK06334 |
long chain fatty acid--[acyl-carrier-protein] ligase; Validated |
276-621 |
1.59e-16 |
|
long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Pssm-ID: 180533 [Multi-domain] Cd Length: 539 Bit Score: 83.33 E-value: 1.59e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELvaeSVC----LMTGVPIGYS-TP 350
Cdd:PRK06334 183 EDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGF---NSCtlfpLLSGVPVVFAyNP 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LT------LIDTSskikrgckgdatvlKPTCMTSVPLILDRISKGINDK----------VNSGSAFKKSLFKflyqykvk 414
Cdd:PRK06334 260 LYpkkiveMIDEA--------------KVTFLGSTPVFFDYILKTAKKQesclpslrfvVIGGDAFKDSLYQ-------- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 415 wvqrgyktplidklvfkkvaklmggkvriimsggaplsadthEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGR-T 493
Cdd:PRK06334 318 ------------------------------------------EALKTFPHIQLRQGYGTTECSPVITINTVNSPKHEScV 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 494 GGPLTVCDIRLVNWEegnyrvTNKPYPQGE---VLIGGECVSQGYykLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLK 570
Cdd:PRK06334 356 GMPIRGMDVLIVSEE------TKVPVSSGEtglVLTRGTSLFSGY--LGEDFGQGFVELGGETWYVTGDLGYVDRHGELF 427
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 24586634 571 IIDRKKDLVKLqAGEYVSLGKVESELktcgiIENicvYGDPTKQYTVALVV 621
Cdd:PRK06334 428 LKGRLSRFVKI-GAEMVSLEALESIL-----MEG---FGQNAADHAGPLVV 469
|
|
| PRK12583 |
PRK12583 |
acyl-CoA synthetase; Provisional |
131-629 |
1.97e-16 |
|
acyl-CoA synthetase; Provisional
Pssm-ID: 237145 [Multi-domain] Cd Length: 558 Bit Score: 82.90 E-value: 1.97e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 131 YKWKTFTEAERTAAnfgRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTV----------YAtLGDDGVaHC 200
Cdd:PRK12583 46 YTWRQLADAVDRLA---RGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNInpayraseleYA-LGQSGV-RW 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 201 ITETEVTTVITSH----DLLPKFKT------LLDKCPLVKTIIYiedqLQKTETTGFKEGVKILPFNQVVkTGQDSKFEH 270
Cdd:PRK12583 121 VICADAFKTSDYHamlqELLPGLAEgqpgalACERLPELRGVVS----LAPAPPPGFLAWHELQARGETV-SREALAERQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELV-AESVCLMTG----VPI 345
Cdd:PRK12583 196 ASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCFGMVlANLGCMTVGaclvYPN 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 346 GYSTPLTLIDTSSKIKrgCkgdatvlkpTCMTSVPlildriskgindkvnsgsafkkslfkflyqykvkwvqrgykTPLI 425
Cdd:PRK12583 276 EAFDPLATLQAVEEER--C---------TALYGVP-----------------------------------------TMFI 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 426 DKLVFKKVAKLMGGKVRIIMSGGAPLSADTHEQ-IKTCLCLELIQGYGLTET------TSGATVMDYRDMTYGRTGGPLT 498
Cdd:PRK12583 304 AELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRRvMDEMHMAEVQIAYGMTETspvslqTTAADDLERRVETVGRTQPHLE 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 499 VcdiRLVNwEEGNyrvTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfEEDGqrWFKTGDIGEIQADGVLKIIDRKKDL 578
Cdd:PRK12583 384 V---KVVD-PDGA---TVPRGEIGELCTRGYSVMKGYWNNPEATAESI-DEDG--WMHTGDLATMDEQGYVRIVGRSKDM 453
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 24586634 579 VkLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQY---TVALVV--PNQNHLEE 629
Cdd:PRK12583 454 I-IRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYgeeIVAWVRlhPGHAASEE 508
|
|
| FadD3 |
cd17638 |
acyl-CoA synthetase FadD3 and similar proteins; This family contains long chain fatty acid CoA ... |
277-578 |
2.49e-16 |
|
acyl-CoA synthetase FadD3 and similar proteins; This family contains long chain fatty acid CoA ligases, including FadD3 which is an acyl-CoA synthetase that initiates catabolism of cholesterol rings C and D in actinobacteria. The cholesterol catabolic pathway occurs in most mycolic acid-containing actinobacteria, such as Rhodococcus jostii RHA1, and is critical for Mycobacterium tuberculosis (Mtb) during infection. FadD3 catalyzes the ATP-dependent CoA thioesterification of 3a-alpha-H-4alpha(3'-propanoate)-7a-beta-methylhexahydro-1,5-indanedione (HIP) to yield HIP-CoA. Hydroxylated analogs of HIP, 5alpha-OH HIP and 1beta-OH HIP, can also be used.
Pssm-ID: 341293 [Multi-domain] Cd Length: 330 Bit Score: 80.62 E-value: 2.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESV-CLMTGVPIgysTPLTLID 355
Cdd:cd17638 1 DVSDIMFTSGTTGRSKGVMCAHRQTLRAAAAWADCADLTEDDRYLIINPFFHTFGYKAGIVaCLLTGATV---VPVAVFD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 356 TSSKIKRGCKGDATVL--KPTCMTSvplILDRiskgindkvnsgsafkkslfkflyqykvkwvqrgyktPLIDKLvfkKV 433
Cdd:cd17638 78 VDAILEAIERERITVLpgPPTLFQS---LLDH-------------------------------------PGRKKF---DL 114
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 434 AKLmggkvRIIMSGGAPLSADTHEQIKTCLCLELI-QGYGLTETTSgATVMDYRD--MTYGRTGG-PLTVCDIRLVNwee 509
Cdd:cd17638 115 SSL-----RAAVTGAATVPVELVRRMRSELGFETVlTAYGLTEAGV-ATMCRPGDdaETVATTCGrACPGFEVRIAD--- 185
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24586634 510 gnyrvtnkpypQGEVLIGGECVSQGYYKLPGKTNEDFfEEDGqrWFKTGDIGEIQADGVLKIIDRKKDL 578
Cdd:cd17638 186 -----------DGEVLVRGYNVMQGYLDDPEATAEAI-DADG--WLHTGDVGELDERGYLRITDRLKDM 240
|
|
| PRK05620 |
PRK05620 |
long-chain fatty-acid--CoA ligase; |
192-633 |
2.67e-16 |
|
long-chain fatty-acid--CoA ligase;
Pssm-ID: 180167 [Multi-domain] Cd Length: 576 Bit Score: 82.52 E-value: 2.67e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 192 LGDDGVAHCITETEVTTVITSHDLLPKFKTLLDKCPLVKTIIYIEDQLQKTETTGFKEGVKILPFNQVVKtGQDSKFEHV 271
Cdd:PRK05620 98 LMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLD-GRSTVYDWP 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 272 PPKGDDIAIIMYTSGSTGTPKGVLLSHKN--------------CIATMKGFVDMVPIYpdDVLIGFLPLAhvfelvaesv 337
Cdd:PRK05620 177 ELDETTAAAICYSTGTTGAPKGVVYSHRSlylqslslrttdslAVTHGESFLCCVPIY--HVLSWGVPLA---------- 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 338 CLMTGvpigysTPLTLIDTSSkikrgckgDATVLKPTCMTSVPlildRISKGIndkvnsgsafkkslfkflyqyKVKWVQ 417
Cdd:PRK05620 245 AFMSG------TPLVFPGPDL--------SAPTLAKIIATAMP----RVAHGV---------------------PTLWIQ 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 418 RgyktplidkLV--FKKVAKLMggKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETT------------SGATVM 483
Cdd:PRK05620 286 L---------MVhyLKNPPERM--SLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSpvgtvarppsgvSGEARW 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 484 DYRdMTYGRTGGPLtvcDIRLVNweEGNYRVTNKpYPQGEVLIGGECVSQGYYKLPGKTN---------------EDFFE 548
Cdd:PRK05620 355 AYR-VSQGRFPASL---EYRIVN--DGQVMESTD-RNEGEIQVRGNWVTASYYHSPTEEGggaastfrgedvedaNDRFT 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 549 EDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKVESELKTCGIIENICVYGDPTKQY-----TVALVVPN 623
Cdd:PRK05620 428 ADG--WLRTGDVGSVTRDGFLTIHDRARDVIR-SGGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWgerplAVTVLAPG 504
|
490
....*....|
gi 24586634 624 QNHLEELAQK 633
Cdd:PRK05620 505 IEPTRETAER 514
|
|
| ABCL |
cd05958 |
2-aminobenzoate-CoA ligase (ABCL); ABCL catalyzes the initial step in the 2-aminobenzoate ... |
276-698 |
4.13e-16 |
|
2-aminobenzoate-CoA ligase (ABCL); ABCL catalyzes the initial step in the 2-aminobenzoate aerobic degradation pathway by activating 2-aminobenzoate to 2-aminobenzoyl-CoA. The reaction is carried out via a two-step process; the first step is ATP-dependent and forms a 2-aminobenzoyl-AMP intermediate, and the second step forms the 2-aminobenzoyl-CoA ester and releases the AMP. 2-Aminobenzoyl-CoA is further converted to 2-amino-5-oxo-cyclohex-1-ene-1-carbonyl-CoA catalyzed by 2-aminobenzoyl-CoA monooxygenase/reductase. ABCL has been purified from cells aerobically grown with 2-aminobenzoate as sole carbon, energy, and nitrogen source, and has been characterized as a monomer.
Pssm-ID: 341268 [Multi-domain] Cd Length: 439 Bit Score: 81.37 E-value: 4.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGF-VDMVPIYPDDVLIGFLPLAHVFELvaesvclmTGVPIgysTPLTLi 354
Cdd:cd05958 97 DDICILAFTSGTTGAPKATMHFHRDPLASADRYaVNVLRLREDDRFVGSPPLAFTFGL--------GGVLL---FPFGV- 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 dtsskikrgckGDATVLKPTcmTSVPLILDRISKgindkvnsgsaFKKSLFkflyqykvkwvqrgYKTPLIDK--LVFKK 432
Cdd:cd05958 165 -----------GASGVLLEE--ATPDLLLSAIAR-----------YKPTVL--------------FTAPTAYRamLAHPD 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 433 VAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNwEEGNy 512
Cdd:cd05958 207 AAGPDLSSLRKCVSAGEALPAALHRAWKEATGIPIIDGIGSTEMFHIFISARPGDARPGATGKPVPGYEAKVVD-DEGN- 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 513 rvtnkPYPQGEV---LIGGEcvsQGYYKLPGKTNEDFFEEDgqrWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSL 589
Cdd:cd05958 285 -----PVPDGTIgrlAVRGP---TGCRYLADKRQRTYVQGG---WNITGDTYSRDPDGYFRHQGRSDDMIVS-GGYNIAP 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 590 GKVESELKTCGIIENICVYGDPTKQytvALVVPnqnhleelaqkhglgdKSFEELCSSPIIEKAILKEIAEHArKCKLQK 669
Cdd:cd05958 353 PEVEDVLLQHPAVAECAVVGHPDES---RGVVV----------------KAFVVLRPGVIPGPVLARELQDHA-KAHIAP 412
|
410 420
....*....|....*....|....*....
gi 24586634 670 YEVPAAITLCKEVwsPDmglvTAAFKLKR 698
Cdd:cd05958 413 YKYPRAIEFVTEL--PR----TATGKLQR 435
|
|
| A_NRPS_CmdD_like |
cd17652 |
similar to adenylation domain of chondramide synthase cmdD; This family of the adenylation (A) ... |
276-678 |
7.02e-16 |
|
similar to adenylation domain of chondramide synthase cmdD; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes phosphinothricin tripeptide (PTT, phosphinothricylalanylalanine) synthetase, where PTT is a natural-product antibiotic and potent herbicide that is produced by Streptomyces hygroscopicus. This adenylation domain has been confirmed to directly activate beta-tyrosine, and fluorinated chondramides are produced through precursor-directed biosynthesis. Also included in this family is chondramide synthase D (also known as ATP-dependent phenylalanine adenylase or phenylalanine activase or tyrosine activase). Chondramides A-D are depsipeptide antitumor and antifungal antibiotics produced by C. crocatus, are a class of mixed peptide/polyketide depsipeptides comprised of three amino acids (alanine, N-methyltryptophan, plus the unusual amino acid beta-tyrosine or alpha-methoxy-beta-tyrosine) and a polyketide chain ([E]-7-hydroxy-2,4,6-trimethyloct-4-enoic acid).
Pssm-ID: 341307 [Multi-domain] Cd Length: 436 Bit Score: 80.76 E-value: 7.02e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPL---AHVFELVAE-----SVCLMTGVPIGY 347
Cdd:cd17652 93 DNLAYVIYTSGSTGRPKGVVVTHRGLANLAAAQIAAFDVGPGSRVLQFASPsfdASVWELLMAllagaTLVLAPAEELLP 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 348 STPLTLIDTSSKIkrgckgDATVLKPTCMTSVPlildriskgindkvnsgsafkkslfkflyqykvkwvqrgyktplidk 427
Cdd:cd17652 173 GEPLADLLREHRI------THVTLPPAALAALP----------------------------------------------- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 428 lvfkkVAKLMGGkvRIIMSGGAPLSADTHEQIKTCLCLelIQGYGLTETTSGATVMD-YRDMTYGRTGGPLT-----VCD 501
Cdd:cd17652 200 -----PDDLPDL--RTLVVAGEACPAELVDRWAPGRRM--INAYGPTETTVCATMAGpLPGGGVPPIGRPVPgtrvyVLD 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 502 IRLvnweegnyrvtnKPYP---QGEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKIIDR 574
Cdd:cd17652 271 ARL------------RPVPpgvPGELYIAGAGLARGYLNRPGLTAERFvadpFGAPGSRMYRTGDLARWRADGQLEFLGR 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 575 KKDLVKLQaGEYVSLGKVESELKTC-GIIEnicvygdptkqytvALVVpnqnhleelAQKHGLGDKSFEELCSSPIIEKA 653
Cdd:cd17652 339 ADDQVKIR-GFRIELGEVEAALTEHpGVAE--------------AVVV---------VRDDRPGDKRLVAYVVPAPGAAP 394
|
410 420
....*....|....*....|....*
gi 24586634 654 ILKEIAEHARKcKLQKYEVPAAITL 678
Cdd:cd17652 395 TAAELRAHLAE-RLPGYMVPAAFVV 418
|
|
| PLN02330 |
PLN02330 |
4-coumarate--CoA ligase-like 1 |
277-628 |
7.64e-16 |
|
4-coumarate--CoA ligase-like 1
Pssm-ID: 215189 [Multi-domain] Cd Length: 546 Bit Score: 81.18 E-value: 7.64e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGfvDMVPIYPDDV----LIGFLPLAHVFELVAesVCLMTGVPIGYSTPLT 352
Cdd:PLN02330 185 DLCALPFSSGTTGISKGVMLTHRNLVANLCS--SLFSVGPEMIgqvvTLGLIPFFHIYGITG--ICCATLRNKGKVVVMS 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 353 LIDTSSKIkrgckgDATVLKPTCMTSV--PLILDRIskgindkvnsgsafkkslfkflyqykvkwvqrgyKTPLIDKLVF 430
Cdd:PLN02330 261 RFELRTFL------NALITQEVSFAPIvpPIILNLV----------------------------------KNPIVEEFDL 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 431 KKVaklmggKVRIIMSGGAPLSADTHEQIKTCL-CLELIQGYGLTETTsgATVMDYRDMTYGR-------TGGPLTVCDI 502
Cdd:PLN02330 301 SKL------KLQAIMTAAAPLAPELLTAFEAKFpGVQVQEAYGLTEHS--CITLTHGDPEKGHgiakknsVGFILPNLEV 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 503 RLVNWEEGNYRVTNKPypqGEVLIGGECVSQGYYKLPGKTNEDFfeeDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQ 582
Cdd:PLN02330 373 KFIDPDTGRSLPKNTP---GELCVRSQCVMQGYYNNKEETDRTI---DEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYK 446
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 24586634 583 aGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVPNQNHLE 628
Cdd:PLN02330 447 -GFQVAPAELEAILLTHPSVEDAAVVPLPDEeagEIPAACVVINPKAKE 494
|
|
| PRK04813 |
PRK04813 |
D-alanine--poly(phosphoribitol) ligase subunit DltA; |
249-661 |
9.37e-16 |
|
D-alanine--poly(phosphoribitol) ligase subunit DltA;
Pssm-ID: 235313 [Multi-domain] Cd Length: 503 Bit Score: 80.71 E-value: 9.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 249 EGVKILPFNQVvktgQDSKFEHVPP------KGDDIAIIMYTSGSTGTPKGVLLSHKNCIAtmkgFVD-MVPiypddvli 321
Cdd:PRK04813 114 LGIPVITLDEL----KDIFATGNPYdfdhavKGDDNYYIIFTSGTTGKPKGVQISHDNLVS----FTNwMLE-------- 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 322 gflplahVFELVAESVCLmTGVPigYSTPLTLIDtsskikrgckgdatvLKPTCMTSVPLILdrISKGINDKvnsgsaFK 401
Cdd:PRK04813 178 -------DFALPEGPQFL-NQAP--YSFDLSVMD---------------LYPTLASGGTLVA--LPKDMTAN------FK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 402 KsLFKFLYQYKVK-WVQrgykTP-LIDklvfkkvaklmggkvriiMSGGAP-LSADTHEQIKTCL-CLE----------- 466
Cdd:PRK04813 225 Q-LFETLPQLPINvWVS----TPsFAD------------------MCLLDPsFNEEHLPNLTHFLfCGEelphktakkll 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 467 -------LIQGYGLTETTSGAT-------VMDYRD---MTYGRTGGPLTVCDIRLVNWEEGNyrvtnkpypQGEVLIGGE 529
Cdd:PRK04813 282 erfpsatIYNTYGPTEATVAVTsieitdeMLDQYKrlpIGYAKPDSPLLIIDEEGTKLPDGE---------QGEIVISGP 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 530 CVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQaDGVLKIIDRKKDLVKLqAGEYVSLGKVESELKTCGIIENICV-- 607
Cdd:PRK04813 353 SVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYLE-DGLLFYQGRIDFQIKL-NGYRIELEEIEQNLRQSSYVESAVVvp 430
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 24586634 608 -YGDPTKQYTVALVVPNQNHLEELAQkhglgdksfeelcsspiIEKAILKEIAEH 661
Cdd:PRK04813 431 yNKDHKVQYLIAYVVPKEEDFEREFE-----------------LTKAIKKELKER 468
|
|
| MACS_like_3 |
cd05971 |
Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the ... |
128-703 |
1.86e-15 |
|
Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.
Pssm-ID: 341275 [Multi-domain] Cd Length: 439 Bit Score: 79.40 E-value: 1.86e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 128 LGDYKWKTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHcitetevt 207
Cdd:cd05971 1 KGTPEKVTFKELKTASNRFANVLKEIGLEKGDRVGVFLSQGPECAIAHIAILRSGAIAVPLFALFGPEALEY-------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 208 tvitshdllpkfktlldkcplvktiiyiedQLQKTETTGFkegvkilpfnqvvktgqdskfehVPPKGDDIAIIMYTSGS 287
Cdd:cd05971 73 ------------------------------RLSNSGASAL-----------------------VTDGSDDPALIIYTSGT 99
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 288 TGTPKGVLLSHKnciatmkgfvdmvpiypddVLIGFLP-LAHVFELVAESVCLMTGvPIGYSTPLTLIDtsskikrgckg 366
Cdd:cd05971 100 TGPPKGALHAHR-------------------VLLGHLPgVQFPFNLFPRDGDLYWT-PADWAWIGGLLD----------- 148
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 367 datVLKPTCMTSVPLILDRISKgindkvnsgsaFK-KSLFKFLYQYKVKWVqrgYKTPLIDKLV--FKKVAKLMGGKVRI 443
Cdd:cd05971 149 ---VLLPSLYFGVPVLAHRMTK-----------FDpKAALDLMSRYGVTTA---FLPPTALKMMrqQGEQLKHAQVKLRA 211
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 444 IMSGGAPLSADTHEQIKTCLCLELIQGYGLTE----TTSGATVMDYRDmtyGRTGGPLTVCDIRLVNwEEGNyrvtnkPY 519
Cdd:cd05971 212 IATGGESLGEELLGWAREQFGVEVNEFYGQTEcnlvIGNCSALFPIKP---GSMGKPIPGHRVAIVD-DNGT------PL 281
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 520 PQGEVliGGECVSQ-------GYYKLPGKTnEDFFEEDgqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKV 592
Cdd:cd05971 282 PPGEV--GEIAVELpdpvaflGYWNNPSAT-EKKMAGD---WLLTGDLGRKDSDGYFWYVGRDDDVIT-SSGYRIGPAEI 354
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 593 ESELKTCGIIENICVYG--DPTKQYTV-ALVVPNQNHLEelaqkhglgdksfeelcsspiiEKAILKEIAEHArKCKLQK 669
Cdd:cd05971 355 EECLLKHPAVLMAAVVGipDPIRGEIVkAFVVLNPGETP----------------------SDALAREIQELV-KTRLAA 411
|
570 580 590
....*....|....*....|....*....|....
gi 24586634 670 YEVPaaitlcKEVWSPDMGLVTAAFKLKRKDIQD 703
Cdd:cd05971 412 HEYP------REIEFVNELPRTATGKIRRRELRA 439
|
|
| A_NRPS_PpsD_like |
cd17650 |
similar to adenylation domain of plipastatin synthase (PpsD); This family of the adenylation ... |
276-634 |
2.84e-15 |
|
similar to adenylation domain of plipastatin synthase (PpsD); This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes bacitracin synthetase 1 (BacA) in Bacillus licheniformis, tyrocidine synthetase in Brevibacillus brevis, plipastatin synthase (PpsD, an important antifungal protein) in Bacillus subtilis and mannopeptimycin peptide synthetase (MppB) in Streptomyces hygroscopicus. Plipastatin has strong fungitoxic activity and is involved in inhibition of phospholipase A2 and biofilm formation. Bacitracin, a mixture of related cyclic peptides, is used as a polypeptide antibiotic while function of tyrocidine is thought to be regulation of sporulation. MppB is involved in biosynthetic pathway of mannopeptimycin, a novel class of mannosylated lipoglycopeptides. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341305 [Multi-domain] Cd Length: 447 Bit Score: 78.66 E-value: 2.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNciatmkgFVDMVPIYPDDVLIGFLPLAHV------FELVAESVC--LMTGVPIGY 347
Cdd:cd17650 93 EDLAYVIYTSGTTGKPKGVMVEHRN-------VAHAAHAWRREYELDSFPVRLLqmasfsFDVFAGDFArsLLNGGTLVI 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 348 STPLTLIDTSSKIKRGCKGDATVlkptcMTSVPlildriskgindkvnsgsAFKKSLFKFLYQykvkwvqRGYKTPLIDK 427
Cdd:cd17650 166 CPDEVKLDPAALYDLILKSRITL-----MESTP------------------ALIRPVMAYVYR-------NGLDLSAMRL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 428 LV----------FKKVAKLMGGKVRIIMSggaplsadtheqiktclcleliqgYGLTETTSGATVMDYRDMTYGRT---- 493
Cdd:cd17650 216 LIvgsdgckaqdFKTLAARFGQGMRIINS------------------------YGVTEATIDSTYYEEGRDPLGDSanvp 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 494 -GGPLTVCDIRLVNweegnyrVTNKPYP---QGEVLIGGECVSQGYYKLPGKTNEDFFE---EDGQRWFKTGDIGEIQAD 566
Cdd:cd17650 272 iGRPLPNTAMYVLD-------ERLQPQPvgvAGELYIGGAGVARGYLNRPELTAERFVEnpfAPGERMYRTGDLARWRAD 344
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24586634 567 GVLKIIDRKKDLVKLQaGEYVSLGKVESEL-KTCGIIENICVYGDPTKQ------YTVALVVPNQNHLEELAQKH 634
Cdd:cd17650 345 GNVELLGRVDHQVKIR-GFRIELGEIESQLaRHPAIDEAVVAVREDKGGearlcaYVVAAATLNTAELRAFLAKE 418
|
|
| PRK09088 |
PRK09088 |
acyl-CoA synthetase; Validated |
269-615 |
3.52e-15 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 181644 [Multi-domain] Cd Length: 488 Bit Score: 78.70 E-value: 3.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 269 EHVPPkgDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVA--ESVCLMTG---V 343
Cdd:PRK09088 130 PSIPP--ERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITsvRPVLAVGGsilV 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 344 PIGYSTPLTLidtsskikrGCKGDATvLKPTCMTSVPLILDRISKgindkvnsgsafkkslfkflyqykvkwvQRGYKTP 423
Cdd:PRK09088 208 SNGFEPKRTL---------GRLGDPA-LGITHYFCVPQMAQAFRA----------------------------QPGFDAA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 424 LIDKLVfkkvaklmggkvrIIMSGGAPLSAdthEQIKTCLC--LELIQGYGLTE--TTSGATV-MDYRDMTYGRTGGPLT 498
Cdd:PRK09088 250 ALRHLT-------------ALFTGGAPHAA---EDILGWLDdgIPMVDGFGMSEagTVFGMSVdCDVIRAKAGAAGIPTP 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 499 VCDIRLVNwEEGNYRVTNKPypqGEVLIGGECVSQGYYKLPGKTNEDFfeeDGQRWFKTGDIGEIQADGVLKIIDRKKDL 578
Cdd:PRK09088 314 TVQTRVVD-DQGNDCPAGVP---GELLLRGPNLSPGYWRRPQATARAF---TGDGWFRTGDIARRDADGFFWVVDRKKDM 386
|
330 340 350
....*....|....*....|....*....|....*..
gi 24586634 579 VkLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQY 615
Cdd:PRK09088 387 F-ISGGENVYPAEIEAVLADHPGIRECAVVGMADAQW 422
|
|
| PRK12467 |
PRK12467 |
peptide synthase; Provisional |
275-623 |
3.60e-15 |
|
peptide synthase; Provisional
Pssm-ID: 237108 [Multi-domain] Cd Length: 3956 Bit Score: 80.21 E-value: 3.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELVAESVClmtgvpigysTPLtli 354
Cdd:PRK12467 3236 GENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFS--FDGAQERFL----------WTL--- 3300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 dtsskikrgCKGDATVLKPTCMTSvPlilDRISKGINDKVNSGSAFKKSLFKFLYQykvkwvqrgyktplidklvFKKVA 434
Cdd:PRK12467 3301 ---------ICGGCLVVRDNDLWD-P---EELWQAIHAHRISIACFPPAYLQQFAE-------------------DAGGA 3348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 435 KlmGGKVRIIMSGGAPLSADTHEQIKTCLC-LELIQGYGLTETTSGATVMD-----YRDMTYGRTGGPLTVCDIRLVnwe 508
Cdd:PRK12467 3349 D--CASLDIYVFGGEAVPPAAFEQVKRKLKpRGLTNGYGPTEAVVTVTLWKcggdaVCEAPYAPIGRPVAGRSIYVL--- 3423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 509 EGNYrvtnKPYPQG---EVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKL 581
Cdd:PRK12467 3424 DGQL----NPVPVGvagELYIGGVGLARGYHQRPSLTAERFvadpFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKI 3499
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 24586634 582 QaGEYVSLGKVESELKTCGIIENICVYGDPTKQYT--VALVVPN 623
Cdd:PRK12467 3500 R-GFRIELGEIEARLLQHPSVREAVVLARDGAGGKqlVAYVVPA 3542
|
|
| PLN02246 |
PLN02246 |
4-coumarate--CoA ligase |
276-580 |
4.15e-15 |
|
4-coumarate--CoA ligase
Pssm-ID: 215137 [Multi-domain] Cd Length: 537 Bit Score: 78.87 E-value: 4.15e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVD-MVP---IYPDDVLIGFLPLAHVFELvaESVcLMTGVPIGystpl 351
Cdd:PLN02246 179 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDgENPnlyFHSDDVILCVLPMFHIYSL--NSV-LLCGLRVG----- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 352 tlidtsskikrgckgdATVlkptcmtsvpLILDRISKGindkvnsgsafkkSLFKFLYQYKVKWVqrgyktPLIDKLVFK 431
Cdd:PLN02246 251 ----------------AAI----------LIMPKFEIG-------------ALLELIQRHKVTIA------PFVPPIVLA 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 432 -----KVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELI-QGYGLTEttSGATVmdyrDMTYGRTGGPLTV----C- 500
Cdd:PLN02246 286 iakspVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLgQGYGMTE--AGPVL----AMCLAFAKEPFPVksgsCg 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 501 ------DIRLVNWEEGNYRVTNKPypqGEVLIGGECVSQGYYKLPGKTnEDFFEEDGqrWFKTGDIGEIQADGVLKIIDR 574
Cdd:PLN02246 360 tvvrnaELKIVDPETGASLPRNQP---GEICIRGPQIMKGYLNDPEAT-ANTIDKDG--WLHTGDIGYIDDDDELFIVDR 433
|
....*.
gi 24586634 575 KKDLVK 580
Cdd:PLN02246 434 LKELIK 439
|
|
| MACS_like |
cd05972 |
Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of ... |
276-596 |
4.71e-15 |
|
Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes.
Pssm-ID: 341276 [Multi-domain] Cd Length: 428 Bit Score: 78.15 E-value: 4.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLI--------------GFLPLAHvfelvaesvclmt 341
Cdd:cd05972 81 EDPALIYFTSGTTGLPKGVLHTHSYPLGHIPTAAYWLGLRPDDIHWniadpgwakgawssFFGPWLL------------- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 342 GVP-IGYstpltlidtsskikRGCKGDATVlkptcmtsvplILDRISK-GINDKVNSGSAFKKslfkflyqykvkWVQrg 419
Cdd:cd05972 148 GATvFVY--------------EGPRFDAER-----------ILELLERyGVTSFCGPPTAYRM------------LIK-- 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 420 yktPLIDKLVFKKVaklmggkvRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETtsGATVMDYRDMTY--GRTGGPL 497
Cdd:cd05972 189 ---QDLSSYKFSHL--------RLVVSAGEPLNPEVIEWWRAATGLPIRDGYGQTET--GLTVGNFPDMPVkpGSMGRPT 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 TVCDIRLVNwEEGNyrvTNKPYPQGE--VLIGGECVSQGYYKLPGKTnEDFFEEDgqrWFKTGDIGEIQADGVLKIIDRK 575
Cdd:cd05972 256 PGYDVAIID-DDGR---ELPPGEEGDiaIKLPPPGLFLGYVGDPEKT-EASIRGD---YYLTGDRAYRDEDGYFWFVGRA 327
|
330 340
....*....|....*....|.
gi 24586634 576 KDLVKlQAGEYVSLGKVESEL 596
Cdd:cd05972 328 DDIIK-SSGYRIGPFEVESAL 347
|
|
| A_NRPS_VisG_like |
cd17651 |
similar to adenylation domain of virginiamycin S synthetase; This family of the adenylation (A) ... |
271-632 |
4.73e-15 |
|
similar to adenylation domain of virginiamycin S synthetase; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes virginiamycin S synthetase (VisG) in Streptomyces virginiae; VisG is involved in virginiamycin S (VS) biosynthesis as the provider of an L-pheGly molecule, a highly specific substrate for the last condensation step by VisF. This family also includes linear gramicidin synthetase B (LgrB) in Brevibacillus brevis. Substrate specificity analysis using residues of the substrate-binding pockets of all 16 adenylation domains has shown good agreement of the substrate amino acids predicted with the sequence of linear gramicidin. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341306 [Multi-domain] Cd Length: 491 Bit Score: 78.54 E-value: 4.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHknciATMKGFVDMvpiypddvligflpLAHVFELVAESVCLMTgVPIGYstp 350
Cdd:cd17651 131 PALDADDLAYVIYTSGSTGRPKGVVMPH----RSLANLVAW--------------QARASSLGPGARTLQF-AGLGF--- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 ltlidtsskikrgckgDATVLK--PTCMTSVPLILdriskgINDKVNSGSAfkkSLFKFLYQYKVkwvQRGY-KTPLIDK 427
Cdd:cd17651 189 ----------------DVSVQEifSTLCAGATLVL------PPEEVRTDPP---ALAAWLDEQRI---SRVFlPTVALRA 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 428 LV-FKKVAKLMGGKVRIIMSGGAPLS--ADTHEQIKTCLCLELIQGYGLTETTS-GATVMDYRDMTYGRT---GGPLTVC 500
Cdd:cd17651 241 LAeHGRPLGVRLAALRYLLTGGEQLVltEDLREFCAGLPGLRLHNHYGPTETHVvTALSLPGDPAAWPAPppiGRPIDNT 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 501 DIRLVNwEEGnyrvtnKPYP---QGEVLIGGECVSQGYYKLPGKTNEDFFEED---GQRWFKTGDIGEIQADGVLKIIDR 574
Cdd:cd17651 321 RVYVLD-AAL------RPVPpgvPGELYIGGAGLARGYLNRPELTAERFVPDPfvpGARMYRTGDLARWLPDGELEFLGR 393
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24586634 575 KKDLVKLQaGEYVSLGKVESELKTCGIIENICVYG---DPTKQYTVALVVPNQNH---LEELAQ 632
Cdd:cd17651 394 ADDQVKIR-GFRIELGEIEAALARHPGVREAVVLAredRPGEKRLVAYVVGDPEApvdAAELRA 456
|
|
| PRK12316 |
PRK12316 |
peptide synthase; Provisional |
275-622 |
9.56e-15 |
|
peptide synthase; Provisional
Pssm-ID: 237054 [Multi-domain] Cd Length: 5163 Bit Score: 78.85 E-value: 9.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLA---HVFELVaesVCLMTGVPIGYSTPL 351
Cdd:PRK12316 654 PENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSfdvSVWEFF---WPLMSGARLVVAAPG 730
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 352 TLIDTSSKIKRGCKGDATVLKptcmtSVPLILDriskgindkvnsgsAFkkslfkflyqykvkwvqrgyktplidkLVFK 431
Cdd:PRK12316 731 DHRDPAKLVELINREGVDTLH-----FVPSMLQ--------------AF---------------------------LQDE 764
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 432 KVAKLMggKVRIIMSGGAPLSADTHEQIKTCLCL-ELIQGYGLTETTSGATVMDYRDMTyGRT---GGPLTVCDIRLVnw 507
Cdd:PRK12316 765 DVASCT--SLRRIVCSGEALPADAQEQVFAKLPQaGLYNLYGPTEAAIDVTHWTCVEEG-GDSvpiGRPIANLACYIL-- 839
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 508 eEGNYrvtnKPYPQ---GEVLIGGECVSQGYYKLPGKTNEDFFEE---DGQRWFKTGDIGEIQADGVLKIIDRKKDLVKL 581
Cdd:PRK12316 840 -DANL----EPVPVgvlGELYLAGRGLARGYHGRPGLTAERFVPSpfvAGERMYRTGDLARYRADGVIEYAGRIDHQVKL 914
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 24586634 582 QaGEYVSLGKVESELKTCGIIENICVYGDPTKQYtVALVVP 622
Cdd:PRK12316 915 R-GLRIELGEIEARLLEHPWVREAAVLAVDGKQL-VGYVVL 953
|
|
| PRK08043 |
PRK08043 |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase; |
271-593 |
1.08e-14 |
|
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;
Pssm-ID: 181207 [Multi-domain] Cd Length: 718 Bit Score: 77.83 E-value: 1.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFelvaesvclmtGVPIGYSTP 350
Cdd:PRK08043 360 VKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSF-----------GLTVGLFTP 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LtlidtsskikrgCKGDATVLKPTCM--TSVP-LILDRiskgiNDKVNSG-SAFKKSLFKFLYQYKVkwvqrgyktplid 426
Cdd:PRK08043 429 L------------LTGAEVFLYPSPLhyRIVPeLVYDR-----NCTVLFGtSTFLGNYARFANPYDF------------- 478
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 427 klvfkkvaklmgGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATV---MDYRDMTYGRTggpLTVCDIR 503
Cdd:PRK08043 479 ------------ARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSInvpMAAKPGTVGRI---LPGMDAR 543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 504 LVN---WEEGnyrvtnkpypqGEVLIGGECVSQGYYKL--------PGKTNEDFFEEDGqrWFKTGDIGEIQADGVLKII 572
Cdd:PRK08043 544 LLSvpgIEQG-----------GRLQLKGPNIMNGYLRVekpgvlevPTAENARGEMERG--WYDTGDIVRFDEQGFVQIQ 610
|
330 340
....*....|....*....|.
gi 24586634 573 DRKKDLVKLqAGEYVSLGKVE 593
Cdd:PRK08043 611 GRAKRFAKI-AGEMVSLEMVE 630
|
|
| FADD10 |
cd17635 |
adenylate forming domain, fatty acid CoA ligase (FadD10); This family contains long chain ... |
277-579 |
1.28e-14 |
|
adenylate forming domain, fatty acid CoA ligase (FadD10); This family contains long chain fatty acid CoA ligases, including FadD10 which is involved in the synthesis of a virulence-related lipopeptide. FadD10 is a fatty acyl-AMP ligase (FAAL) that transfers fatty acids to an acyl carrier protein. Structures of FadD10 in apo- and complexed form with dodecanoyl-AMP, show a novel open conformation, facilitated by its unique inter-domain and intermolecular interactions, which is critical for the enzyme to carry out the acyl transfer onto the acyl carrier protein (Rv0100) rather than coenzyme A.
Pssm-ID: 341290 [Multi-domain] Cd Length: 340 Bit Score: 75.76 E-value: 1.28e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMV-PIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPLTLID 355
Cdd:cd17635 2 DPLAVIFTSGTTGEPKAVLLANKTFFAVPDILQKEGlNWVVGDVTYLPLPATHIGGLWWILTCLIHGGLCVTGGENTTYK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 356 TSSKIKRGCKGDATVLKPTCMTSVPLILdriskgindkvnsgsafkKSLFKFLYQykvkwvqrgyktplidklvfkkvak 435
Cdd:cd17635 82 SLFKILTTNAVTTTCLVPTLLSKLVSEL------------------KSANATVPS------------------------- 118
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 436 lmggkVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSgATVMDYRD--MTYGRTGGPLTVCDIRLVNweegNYR 513
Cdd:cd17635 119 -----LRLIGYGGSRAIAADVRFIEATGLTNTAQVYGLSETGT-ALCLPTDDdsIEINAVGRPYPGVDVYLAA----TDG 188
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24586634 514 VTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFFEEdgqrWFKTGDIGEIQADGVLKIIDRKKDLV 579
Cdd:cd17635 189 IAGPSASFGTIWIKSPANMLGYWNNPERTAEVLIDG----WVNTGDLGERREDGFLFITGRSSESI 250
|
|
| PRK07786 |
PRK07786 |
long-chain-fatty-acid--CoA ligase; Validated |
257-632 |
1.50e-14 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 169098 [Multi-domain] Cd Length: 542 Bit Score: 77.12 E-value: 1.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 257 NQVVKTGQDSKFEHVPpkGDDIAIIMYTSGSTGTPKGVLLSHKN-------CIATMKGFVdmvpiyPDDVliGFL--PLA 327
Cdd:PRK07786 157 DLLAEAGPAHAPVDIP--NDSPALIMYTSGTTGRPKGAVLTHANltgqamtCLRTNGADI------NSDV--GFVgvPLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 328 HVFELVAESVCLMTGVPigystpltlidtsskikrgckgdaTVLKPTCMTSVPLILDRISKginDKVNsgsafkkSLFKF 407
Cdd:PRK07786 227 HIAGIGSMLPGLLLGAP------------------------TVIYPLGAFDPGQLLDVLEA---EKVT-------GIFLV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 408 LYQYK-VKWVQRGYKTPLidklvfkkvaklmggKVRIIMSGGAPLSADTHEQIKTCLCLELI-QGYGLTETTSGATVMDY 485
Cdd:PRK07786 273 PAQWQaVCAEQQARPRDL---------------ALRVLSWGAAPASDTLLRQMAATFPEAQIlAAFGQTEMSPVTCMLLG 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 486 RDM--TYGRTGGPLTVCDIRLVNwEEGNyrvtnkPYPQGEVligGECV------SQGYYKLPGKTNEDFfeeDGQrWFKT 557
Cdd:PRK07786 338 EDAirKLGSVGKVIPTVAARVVD-ENMN------DVPVGEV---GEIVyraptlMSGYWNNPEATAEAF---AGG-WFHS 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 558 GDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYT---VALVVPNQN----HLEEL 630
Cdd:PRK07786 404 GDLVRQDEEGYVWVVDRKKDMI-ISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGevpVAVAAVRNDdaalTLEDL 482
|
..
gi 24586634 631 AQ 632
Cdd:PRK07786 483 AE 484
|
|
| PRK05691 |
PRK05691 |
peptide synthase; Validated |
274-579 |
5.89e-14 |
|
peptide synthase; Validated
Pssm-ID: 235564 [Multi-domain] Cd Length: 4334 Bit Score: 76.36 E-value: 5.89e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 274 KGDDIAIIMYTSGSTGTPKGVLLSHKNCIAT----MKGFvdMVPIYPDDVLIGFLPLAHVFELVAEsvcLMTgvPIGYST 349
Cdd:PRK05691 164 QPDDIAFLQYTSGSTALPKGVQVSHGNLVANeqliRHGF--GIDLNPDDVIVSWLPLYHDMGLIGG---LLQ--PIFSGV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 350 PLTLIDTSSKIKRgckgdatvlkptcmtsvPL-ILDRISKgINDKVNSGSafkkslfKFLYQYKVKWVQRGyktplidkl 428
Cdd:PRK05691 237 PCVLMSPAYFLER-----------------PLrWLEAISE-YGGTISGGP-------DFAYRLCSERVSES--------- 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 429 vfkKVAKLMGGKVRIIMSGGAPLSADT----HEQIKTCLCLE--LIQGYGLTETT---------SGATVMDYRDMTYGR- 492
Cdd:PRK05691 283 ---ALERLDLSRWRVAYSGSEPIRQDSlerfAEKFAACGFDPdsFFASYGLAEATlfvsggrrgQGIPALELDAEALARn 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 493 -----TGGPLTVC-------DIRLVNWEEGNYRVTNKpypQGEVLIGGECVSQGYYKLPGKTNEDFFEEDGQRWFKTGDI 560
Cdd:PRK05691 360 raepgTGSVLMSCgrsqpghAVLIVDPQSLEVLGDNR---VGEIWASGPSIAHGYWRNPEASAKTFVEHDGRTWLRTGDL 436
|
330
....*....|....*....
gi 24586634 561 GEIQaDGVLKIIDRKKDLV 579
Cdd:PRK05691 437 GFLR-DGELFVTGRLKDML 454
|
|
| FACL_like_5 |
cd05924 |
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ... |
273-649 |
5.92e-14 |
|
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341248 [Multi-domain] Cd Length: 364 Bit Score: 73.96 E-value: 5.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 273 PKGDDIAIImYTSGSTGTPKGVLLSHKNCIATMKGFVDMV-PIYPDDVLIGflplahvfeLVAESVCLMTGVPI-----G 346
Cdd:cd05924 1 RSADDLYIL-YTGGTTGMPKGVMWRQEDIFRMLMGGADFGtGEFTPSEDAH---------KAAAAAAGTVMFPApplmhG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 347 YSTPLTLIDTSskikrgckGDATVLKPTCMTSVPLILDRISKginDKVNS----GSAFKKslfkflyqykvkwvqrgykt 422
Cdd:cd05924 71 TGSWTAFGGLL--------GGQTVVLPDDRFDPEEVWRTIEK---HKVTSmtivGDAMAR-------------------- 119
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 423 PLIDKLVFKKVAKLMGgkVRIIMSGGAPLSadthEQIKTCLC-----LELIQGYGLTETTSGATVMDyRDMtyGRTGGPL 497
Cdd:cd05924 120 PLIDALRDAGPYDLSS--LFAISSGGALLS----PEVKQGLLelvpnITLVDAFGSSETGFTGSGHS-AGS--GPETGPF 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 TVCDIRLVNWEEGNYRVTnkPYPQGEVLIG--GEcVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLKIIDRK 575
Cdd:cd05924 191 TRANPDTVVLDDDGRVVP--PGSGGVGWIArrGH-IPLGYYGDEAKTAETFPEVDGVRYAVPGDRATVEADGTVTLLGRG 267
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 576 KDLVKlQAGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVvpnqnhleELAQKHGLGDKSFEELCSSPI 649
Cdd:cd05924 268 SVCIN-TGGEKVFPEEVEEALKSHPAVYDVLVVGRPDErwgQEVVAVV--------QLREGAGVDLEELREHCRTRI 335
|
|
| A_NRPS_ACVS-like |
cd17648 |
N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase; This family contains ACV ... |
277-629 |
1.77e-13 |
|
N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase; This family contains ACV synthetase (ACVS, EC 6.3.2.26; also known as N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase or delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) is involved in medically important antibiotic biosynthesis. ACV synthetase is active in an early step in the penicillin G biosynthesis pathway which involves the formation of the tripeptide 6-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV); each of the constituent amino acids of the tripeptide ACV are activated as aminoacyl-adenylates with peptide bonds formed through the participation of amino acid thioester intermediates. ACV is then cyclized by the action of isopenicillin N synthase.
Pssm-ID: 341303 [Multi-domain] Cd Length: 453 Bit Score: 73.20 E-value: 1.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHK---NCIATMKGFVDMvpIYPDDVLIGFLPlAHVFELVAESVCLmtgvpigystplTL 353
Cdd:cd17648 95 DLAYAIYTSGTTGKPKGVLVEHGsvvNLRTSLSERYFG--RDNGDEAVLFFS-NYVFDFFVEQMTL------------AL 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 354 IDtsskikrgckGDATVLKPTCMTSVPlilDRISKGIND-KVNSGSAfkkslfkflyqykvkwvqrgykTP-LIDKLVFK 431
Cdd:cd17648 160 LN----------GQKLVVPPDEMRFDP---DRFYAYINReKVTYLSG----------------------TPsVLQQYDLA 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 432 KVAKLmggkvRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYR-----DMTYGRTggpltvcdIRLVN 506
Cdd:cd17648 205 RLPHL-----KRVDAAGEEFTAPVFEKLRSRFAGLIINAYGPTETTVTNHKRFFPgdqrfDKSLGRP--------VRNTK 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 507 WEEGNYRVtnKPYP---QGEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQ-------RWFKTGDIGEIQADGVLKII 572
Cdd:cd17648 272 CYVLNDAM--KRVPvgaVGELYLGGDGVARGYLNRPELTAERFlpnpFQTEQErargrnaRLYKTGDLVRWLPSGELEYL 349
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24586634 573 DRKKDLVKLQaGEYVSLGKVESELKTC-GIIENICVYGD-------PTKQYTVALVVPNQNHLEE 629
Cdd:cd17648 350 GRNDFQVKIR-GQRIEPGEVEAALASYpGVRECAVVAKEdasqaqsRIQKYLVGYYLPEPGHVPE 413
|
|
| PRK07824 |
PRK07824 |
o-succinylbenzoate--CoA ligase; |
273-632 |
4.52e-13 |
|
o-succinylbenzoate--CoA ligase;
Pssm-ID: 236108 [Multi-domain] Cd Length: 358 Bit Score: 71.23 E-value: 4.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 273 PKGDDIAIIMYTSGSTGTPKGVLLSHKNCIAT-------MKGfvdmvpiyPDDVLIGfLPLAHVfelvAESVCLMTGVPI 345
Cdd:PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASadathdrLGG--------PGQWLLA-LPAHHI----AGLQVLVRSVIA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 346 GYstpltlidtsskikrgckgdatvlkptcmtsVPLILDrISKG--INDKVNSGSAFKKSlfkflyqykvkwvqRGYKTp 423
Cdd:PRK07824 99 GS-------------------------------EPVELD-VSAGfdPTALPRAVAELGGG--------------RRYTS- 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 424 lidkLVFKKVAKLMGGKVRI--------IMSGGAPLSADTHEQIKTcLCLELIQGYGLTETtSGATVMDyrdmtygrtGG 495
Cdd:PRK07824 132 ----LVPMQLAKALDDPAATaalaeldaVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSET-SGGCVYD---------GV 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 496 PLTVCDIRLVNweegnyrvtnkpypqGEVLIGGECVSQGYYKLPgktNEDFFEEDGqrWFKTGDIGEIQaDGVLKIIDRK 575
Cdd:PRK07824 197 PLDGVRVRVED---------------GRIALGGPTLAKGYRNPV---DPDPFAEPG--WFRTDDLGALD-DGVLTVLGRA 255
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 576 KDLVKlQAGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALVVPNQNHLEELAQ 632
Cdd:PRK07824 256 DDAIS-TGGLTVLPQVVEAALATHPAVADCAVFGLPDDrlgQRVVAAVVGDGGPAPTLEA 314
|
|
| FCS |
cd05921 |
Feruloyl-CoA synthetase (FCS); Feruloyl-CoA synthetase is an essential enzyme in the feruloyl ... |
121-714 |
4.72e-13 |
|
Feruloyl-CoA synthetase (FCS); Feruloyl-CoA synthetase is an essential enzyme in the feruloyl acid degradation pathway and enables some proteobacteria to grow on media containing feruloyl acid as the sole carbon source. It catalyzes the transfer of CoA to the carboxyl group of ferulic acid, which then forms feruloyl-CoA in the presence of ATP and Mg2. The resulting feruloyl-CoA is further degraded to vanillin and acetyl-CoA. Feruloyl-CoA synthetase (FCS) is a subfamily of the adenylate-forming enzymes superfamily.
Pssm-ID: 341245 [Multi-domain] Cd Length: 561 Bit Score: 72.46 E-value: 4.72e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 121 RVFKKYNLGDYKWKTFT--EAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFK---QAMPIVTVYATLGDD 195
Cdd:cd05921 11 RTWLAEREGNGGWRRVTyaEALRQVRAIAQGLLDLGLSAERPLLILSGNSIEHALMALAAMYagvPAAPVSPAYSLMSQD 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 196 --GVAHCITETEVTTVITSHDllPKFKTLLDKC-PLVKTIIYIEDQLQKTETTGFKEGVKILPFNQVvktgqDSKFEHVP 272
Cdd:cd05921 91 laKLKHLFELLKPGLVFAQDA--APFARALAAIfPLGTPLVVSRNAVAGRGAISFAELAATPPTAAV-----DAAFAAVG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 273 PkgDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDD--VLIGFLPLAHVFelvaesvclmtGVPIGYStp 350
Cdd:cd05921 164 P--DTVAKFLFTSGSTGLPKAVINTQRMLCANQAMLEQTYPFFGEEppVLVDWLPWNHTF-----------GGNHNFN-- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LTLIDTSS-KIKRG---CKGDATVLK------PTCMTSVPlildrisKGINDKVNS---GSAFKKSLFKflyqykvkwvq 417
Cdd:cd05921 229 LVLYNGGTlYIDDGkpmPGGFEETLRnlreisPTVYFNVP-------AGWEMLVAAlekDEALRRRFFK----------- 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 418 rgyktplidklvfkkvaklmggKVRIIMSGGAPLSADTHEQI-----KTC-LCLELIQGYGLTETTSGATVMDYRDMTYG 491
Cdd:cd05921 291 ----------------------RLKLMFYAGAGLSQDVWDRLqalavATVgERIPMMAGLGATETAPTATFTHWPTERSG 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 492 RTGGPLTVCDIRLVnweegnyrvtnkpyPQG---EVLIGGECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGEIqADGV 568
Cdd:cd05921 349 LIGLPAPGTELKLV--------------PSGgkyEVRVKGPNVTPGYWRQPELTAQ-AFDEEG--FYCLGDAAKL-ADPD 410
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 569 lkiiDRKKDLV---------KLQAGEYVSLG--KVESELKTCGIIENICVYGdPTKQYTVALVVPNQNHLEELAqkhGLG 637
Cdd:cd05921 411 ----DPAKGLVfdgrvaedfKLASGTWVSVGplRARAVAACAPLVHDAVVAG-EDRAEVGALVFPDLLACRRLV---GLQ 482
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 638 DKSFEELCSSPIIEKAILKEIAEHARKCKLQKYEVpAAITLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMYA 714
Cdd:cd05921 483 EASDAEVLRHAKVRAAFRDRLAALNGEATGSSSRI-ARALLLDEPPSIDKGEITDKGYINQRAVLERRAALVERLYA 558
|
|
| PRK09274 |
PRK09274 |
peptide synthase; Provisional |
263-586 |
5.24e-13 |
|
peptide synthase; Provisional
Pssm-ID: 236443 [Multi-domain] Cd Length: 552 Bit Score: 72.24 E-value: 5.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 263 GQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDV-LIGFlPLAHVFelvaeSVCL-M 340
Cdd:PRK09274 161 GAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIdLPTF-PLFALF-----GPALgM 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 341 TGV--PIGYSTPLT-----LIDTsskIKR-GCkgdatvlkpTCMTSVPLILDRISkgindkvnsgsafkkslfkflyQYK 412
Cdd:PRK09274 235 TSVipDMDPTRPATvdpakLFAA---IERyGV---------TNLFGSPALLERLG----------------------RYG 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 413 vkwVQRGYKTPlidklvfkkvaklmggKVRIIMSGGAPLSADTHEQIKTCL--CLELIQGYGLTET------TSGATVMD 484
Cdd:PRK09274 281 ---EANGIKLP----------------SLRRVISAGAPVPIAVIERFRAMLppDAEILTPYGATEAlpissiESREILFA 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 485 YRDMTygRTGG------PLTVCDIRLVnweegnyRVTNKPYPQ------------GEVLIGGECVSQGYYKLPGKTNED- 545
Cdd:PRK09274 342 TRAAT--DNGAgicvgrPVDGVEVRII-------AISDAPIPEwddalrlatgeiGEIVVAGPMVTRSYYNRPEATRLAk 412
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 24586634 546 FFEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQAGEY 586
Cdd:PRK09274 413 IPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTL 453
|
|
| PRK07768 |
PRK07768 |
long-chain-fatty-acid--CoA ligase; Validated |
276-579 |
6.49e-13 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 236091 [Multi-domain] Cd Length: 545 Bit Score: 71.95 E-value: 6.49e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPD-DVLIGFLPLAHVFELVAE-SVCLMTGVPIGYSTPLT- 352
Cdd:PRK07768 152 DDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVEtDVMVSWLPLFHDMGMVGFlTVPMYFGAELVKVTPMDf 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 353 LIDTSSKIKRGCKGDATvlkptcMTSVPlildriskgindkvnsgsafkkslfKFLYQYKVKWVQRGYKTPLIDKlvfkk 432
Cdd:PRK07768 232 LRDPLLWAELISKYRGT------MTAAP-------------------------NFAYALLARRLRRQAKPGAFDL----- 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 433 vaklmgGKVRIIMSGGAPLSADTHEQiktcLCLE----------LIQGYGLTETTSGAT--------VMDYRD------- 487
Cdd:PRK07768 276 ------SSLRFALNGAEPIDPADVED----LLDAgarfglrpeaILPAYGMAEATLAVSfspcgaglVVDEVDadllaal 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 488 -----MTYGRT------GGPLTVCDIRLVNwEEGNYRVTNKpypQGEVLIGGECVSQGYyklpgkTNEDFFEE--DGQRW 554
Cdd:PRK07768 346 rravpATKGNTrrlatlGPPLPGLEVRVVD-EDGQVLPPRG---VGVIELRGESVTPGY------LTMDGFIPaqDADGW 415
|
330 340
....*....|....*....|....*
gi 24586634 555 FKTGDIGEIQADGVLKIIDRKKDLV 579
Cdd:PRK07768 416 LDTGDLGYLTEEGEVVVCGRVKDVI 440
|
|
| MACS_like_4 |
cd05969 |
Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS); This family is most ... |
135-611 |
9.11e-13 |
|
Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS); This family is most similar to acetyl-CoA synthetase. Acetyl-CoA synthetase (ACS) catalyzes the formation of acetyl-CoA from acetate, CoA, and ATP. Synthesis of acetyl-CoA is carried out in a two-step reaction. In the first step, the enzyme catalyzes the synthesis of acetyl-AMP intermediate from acetate and ATP. In the second step, acetyl-AMP reacts with CoA to produce acetyl-CoA. This enzyme is only present in bacteria.
Pssm-ID: 341273 [Multi-domain] Cd Length: 442 Bit Score: 70.99 E-value: 9.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGvahcitetevttvitshd 214
Cdd:cd05969 2 TFAQLKVLSARFANVLKSLGVGKGDRVFVLSPRSPELYFSMLGIGKIGAVICPLFSAFGPEA------------------ 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 215 llpkfktlldkcplvktiiyIEDQLQKTETtgfkegvkilpfnQVVKTGQdSKFEHVPPKgdDIAIIMYTSGSTGTPKGV 294
Cdd:cd05969 64 --------------------IRDRLENSEA-------------KVLITTE-ELYERTDPE--DPTLLHYTSGTTGTPKGV 107
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 295 LLSHKnciatmkgfvDMVPIYpddvligfLPLAHVFELVAESVCLMTGVPiGYSTpltlidtsskikrgckGDATVLKPT 374
Cdd:cd05969 108 LHVHD----------AMIFYY--------FTGKYVLDLHPDDIYWCTADP-GWVT----------------GTVYGIWAP 152
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 375 CMTSVPLILDriskgindkvnSGSAFKKSLFKFLYQYKVK-WvqrgYKTPLIDKLVFKK----VAKLMGGKVRIIMSGGA 449
Cdd:cd05969 153 WLNGVTNVVY-----------EGRFDAESWYGIIERVKVTvW----YTAPTAIRMLMKEgdelARKYDLSSLRFIHSVGE 217
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 450 PLSADTHEQIKTCLCLELIQGYGLTETTSGAtVMDY--RDMTYGRTGGPLTVCDIRLVNwEEGNyrvTNKPYPQGEVLI- 526
Cdd:cd05969 218 PLNPEAIRWGMEVFGVPIHDTWWQTETGSIM-IANYpcMPIKPGSMGKPLPGVKAAVVD-ENGN---ELPPGTKGILALk 292
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 527 -GGECVSQGYYKLPGKTNEDFFeeDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVESELKTCGIIENI 605
Cdd:cd05969 293 pGWPSMFRGIWNDEERYKNSFI--DG--WYLTGDLAYRDEDGYFWFVGRADDIIKT-SGHRVGPFEVESALMEHPAVAEA 367
|
....*.
gi 24586634 606 CVYGDP 611
Cdd:cd05969 368 GVIGKP 373
|
|
| A_NRPS_acs4 |
cd17654 |
acyl-CoA synthetase family member 4; This family of the adenylation (A) domain of nonribosomal ... |
278-607 |
1.80e-12 |
|
acyl-CoA synthetase family member 4; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) contains acyl-CoA synthethase family member 4, also known as 2-aminoadipic 6-semialdehyde dehydrogenase or aminoadipate-semialdehyde dehydrogenase, most of which are uncharacterized. Acyl-CoA synthetase catalyzes the initial reaction in fatty acid metabolism, by forming a thioester with CoA. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341309 [Multi-domain] Cd Length: 449 Bit Score: 70.19 E-value: 1.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 278 IAIIMYTSGSTGTPKGVLLSHKnCIAT-MKGFVDMVPIYPDDVLIGFLPL------AHVFELVAESVCLMTGVPIGYSTP 350
Cdd:cd17654 120 LAYVIHTSGTTGTPKIVAVPHK-CILPnIQHFRSLFNITSEDILFLTSPLtfdpsvVEIFLSLSSGATLLIVPTSVKVLP 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LTLIDTSSKIKRgckgdATVLKPTcmtsvPLILDRI-SKGINDKVNSGSafkKSLfkflyqykvkwvqrgyktplidklv 429
Cdd:cd17654 199 SKLADILFKRHR-----ITVLQAT-----PTLFRRFgSQSIKSTVLSAT---SSL------------------------- 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 430 fkkvaklmggkvRIIMSGGAPLSADT------HEQIKTclclELIQGYGLTETTSGATVMDYRDMTYGRTGG-PL--TVC 500
Cdd:cd17654 241 ------------RVLALGGEPFPSLVilsswrGKGNRT----RIFNIYGITEVSCWALAYKVPEEDSPVQLGsPLlgTVI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 501 DIRLVNWEEGnyrvtnkpypQGEVLIGGE---CVSQGYYKLPGKTnedffeedgqrWFKTGDIGEIQaDGVLKIIDRKKD 577
Cdd:cd17654 305 EVRDQNGSEG----------TGQVFLGGLnrvCILDDEVTVPKGT-----------MRATGDFVTVK-DGELFFLGRKDS 362
|
330 340 350
....*....|....*....|....*....|
gi 24586634 578 LVKlQAGEYVSLGKVESELKTCGIIENICV 607
Cdd:cd17654 363 QIK-RRGKRINLDLIQQVIESCLGVESCAV 391
|
|
| AFD_YhfT-like |
cd17633 |
fatty acid-CoA ligase VraA; This family of acyl-CoA ligases includes Bacillus subtilis YhfT, ... |
281-624 |
2.61e-12 |
|
fatty acid-CoA ligase VraA; This family of acyl-CoA ligases includes Bacillus subtilis YhfT, as well as long-chain fatty acid-CoA ligase VraA, all of which are as yet to be characterized. These proteins belong to the adenylate-forming enzymes which catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain
Pssm-ID: 341288 [Multi-domain] Cd Length: 320 Bit Score: 68.59 E-value: 2.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 281 IMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIgystpltLIDTSSKI 360
Cdd:cd17633 5 IGFTSGTTGLPKAYYRSERSWIESFVCNEDLFNISGEDAILAPGPLSHSLFLYGAISALYLGGTF-------IGQRKFNP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 361 KRGCKGDATvLKPTCMTSVPLILDRISKgINDKVNsgsafkkslfkflyqykvkwvqrgyktplidklvfkkvaklmggK 440
Cdd:cd17633 78 KSWIRKINQ-YNATVIYLVPTMLQALAR-TLEPES--------------------------------------------K 111
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 441 VRIIMSGGAPLSADTHEQIKTCLC-LELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEEGNyrvtnkpy 519
Cdd:cd17633 112 IKSIFSSGQKLFESTKKKLKNIFPkANLIEFYGTSELSFITYNFNQESRPPNSVGRPFPNVEIEIRNADGGE-------- 183
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 520 pQGEVLIGGECVSQGYyklpgkTNEDFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTC 599
Cdd:cd17633 184 -IGKIFVKSEMVFSGY------VRGGFSNPDG--WMSVGDIGYVDEEGYLYLVGRESDMI-IIGGINIFPTEIESVLKAI 253
|
330 340
....*....|....*....|....*...
gi 24586634 600 GIIENICVYGDPTK---QYTVALVVPNQ 624
Cdd:cd17633 254 PGIEEAIVVGIPDArfgEIAVALYSGDK 281
|
|
| PRK06018 |
PRK06018 |
putative acyl-CoA synthetase; Provisional |
216-588 |
2.90e-12 |
|
putative acyl-CoA synthetase; Provisional
Pssm-ID: 235673 [Multi-domain] Cd Length: 542 Bit Score: 69.78 E-value: 2.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 216 LPKFKTLLDKCPLVKTIIYIEDQLQKTETTgFKEGVKilpFNQVVKtGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVL 295
Cdd:PRK06018 122 VPILEKIADKLPSVERYVVLTDAAHMPQTT-LKNAVA---YEEWIA-EADGDFAWKTFDENTAAGMCYTSGTTGDPKGVL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 296 LSHKNCI--ATMKGFVDMVPIYPDDVLIGFLPLAHvfelvAESVclmtgvPIGYSTPLTlidTSSKIKRGCKGDATvlkp 373
Cdd:PRK06018 197 YSHRSNVlhALMANNGDALGTSAADTMLPVVPLFH-----ANSW------GIAFSAPSM---GTKLVMPGAKLDGA---- 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 374 tcmtSVPLILDriskgiNDKVnSGSAFKKSLFKFLYQYKVKwvqRGYKTPLIDKLVfkkvaklMGGkvriimsggaplSA 453
Cdd:PRK06018 259 ----SVYELLD------TEKV-TFTAGVPTVWLMLLQYMEK---EGLKLPHLKMVV-------CGG------------SA 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 454 DTHEQIKTCL--CLELIQGYGLTET----TSGATVMDYRDMTY----------GRTggPLTVcDIRLVNwEEGNyRVTNK 517
Cdd:PRK06018 306 MPRSMIKAFEdmGVEVRHAWGMTEMsplgTLAALKPPFSKLPGdarldvlqkqGYP--PFGV-EMKITD-DAGK-ELPWD 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24586634 518 PYPQGEVLIGGECVSQGYYKLPGKtnedFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVS 588
Cdd:PRK06018 381 GKTFGRLKVRGPAVAAAYYRVDGE----ILDDDG--FFDTGDVATIDAYGYMRITDRSKDVIK-SGGEWIS 444
|
|
| PRK07445 |
PRK07445 |
O-succinylbenzoic acid--CoA ligase; Reviewed |
442-624 |
2.97e-12 |
|
O-succinylbenzoic acid--CoA ligase; Reviewed
Pssm-ID: 236019 [Multi-domain] Cd Length: 452 Bit Score: 69.25 E-value: 2.97e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 442 RIIMSGGAP-----LSADTHEQIKTCLCleliqgYGLTETTSGATVMDYRDMTYGR--TGGPLTvcdirlvnweegNYRV 514
Cdd:PRK07445 233 RTILLGGAPawpslLEQARQLQLRLAPT------YGMTETASQIATLKPDDFLAGNnsSGQVLP------------HAQI 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 515 TNKPYPQGEVLIGGECVSQGYYklPgktneDFFeeDGQRWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVES 594
Cdd:PRK07445 295 TIPANQTGNITIQAQSLALGYY--P-----QIL--DSQGIFETDDLGYLDAQGYLHILGRNSQKI-ITGGENVYPAEVEA 364
|
170 180 190
....*....|....*....|....*....|...
gi 24586634 595 ELKTCGIIENICVYGDPTKQY---TVALVVPNQ 624
Cdd:PRK07445 365 AILATGLVQDVCVLGLPDPHWgevVTAIYVPKD 397
|
|
| PLN03102 |
PLN03102 |
acyl-activating enzyme; Provisional |
283-596 |
3.37e-12 |
|
acyl-activating enzyme; Provisional
Pssm-ID: 215576 [Multi-domain] Cd Length: 579 Bit Score: 69.66 E-value: 3.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 283 YTSGSTGTPKGVLLSHKNC-IATMKGFVDM-VPIYPddVLIGFLPLAHvfelvaesvClmTGVPIGYSTpltlidtsski 360
Cdd:PLN03102 193 YTSGTTADPKGVVISHRGAyLSTLSAIIGWeMGTCP--VYLWTLPMFH---------C--NGWTFTWGT----------- 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 361 krGCKGDATVlkptCMTSVplILDRISKGINDKVNSGSAFKKSLFKFLYQykvkwvqrGYKTPLIDKlvfkkvaklmGGK 440
Cdd:PLN03102 249 --AARGGTSV----CMRHV--TAPEIYKNIEMHNVTHMCCVPTVFNILLK--------GNSLDLSPR----------SGP 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 441 VRIiMSGGAPLSADTHEQIKTcLCLELIQGYGLTETTSGATVMDYRD----------MTYGRTGG--PLTVCDIRLVNWE 508
Cdd:PLN03102 303 VHV-LTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQDewnrlpenqqMELKARQGvsILGLADVDVKNKE 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 509 egnyrvTNKPYPQ-----GEVLIGGECVSQGYYKLPGKTNEDFfeedGQRWFKTGDIGEIQADGVLKIIDRKKDLVkLQA 583
Cdd:PLN03102 381 ------TQESVPRdgktmGEIVIKGSSIMKGYLKNPKATSEAF----KHGWLNTGDVGVIHPDGHVEIKDRSKDII-ISG 449
|
330
....*....|...
gi 24586634 584 GEYVSLGKVESEL 596
Cdd:PLN03102 450 GENISSVEVENVL 462
|
|
| PRK07008 |
PRK07008 |
long-chain-fatty-acid--CoA ligase; Validated |
216-593 |
3.44e-12 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 235908 [Multi-domain] Cd Length: 539 Bit Score: 69.35 E-value: 3.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 216 LPKFKTLLDKCPLVKTIIYIEDQLQKTETTgfkegVKILPFNQVVkTGQDSKFEHvPPKGDDIAIIM-YTSGSTGTPKGV 294
Cdd:PRK07008 122 LPLVDALAPQCPNVKGWVAMTDAAHLPAGS-----TPLLCYETLV-GAQDGDYDW-PRFDENQASSLcYTSGTTGNPKGA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 295 LLSHKNCI--ATMKGFVDMVPIYPDDVLIGFLPLAHVFELvaesvclmtGVPigYSTPLTlidtsskikrGCKgdatvlk 372
Cdd:PRK07008 195 LYSHRSTVlhAYGAALPDAMGLSARDAVLPVVPMFHVNAW---------GLP--YSAPLT----------GAK------- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 373 ptcmtsvpLILdriskgindkvnSGSAFK-KSLFKFLYQYKVKWVQrGYKTPLIDKLVFKKVAKLMGGKVRIIMSGGAPL 451
Cdd:PRK07008 247 --------LVL------------PGPDLDgKSLYELIEAERVTFSA-GVPTVWLGLLNHMREAGLRFSTLRRTVIGGSAC 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 452 SADTHEQIKTCLCLELIQGYGLTETTSGATV-----------MDYRDMTYGRTGGPLTVCDIRLVNwEEGnyrvtnKPYP 520
Cdd:PRK07008 306 PPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLcklkwkhsqlpLDEQRKLLEKQGRVIYGVDMKIVG-DDG------RELP 378
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 521 -----QGEVLIGGECVSQGYYKlpgktNEDFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKVE 593
Cdd:PRK07008 379 wdgkaFGDLQVRGPWVIDRYFR-----GDASPLVDG--WFPTGDVATIDADGFMQITDRSKDVIK-SGGEWISSIDIE 448
|
|
| FATP_FACS |
cd05940 |
Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its ... |
277-609 |
5.67e-12 |
|
Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes; Fatty acid transport protein (FATP) transports long-chain or very-long-chain fatty acids across the plasma membrane. FATPs also have fatty acid CoA synthetase activity, thus playing dual roles as fatty acid transporters and its activation enzymes. At least five copies of FATPs are identified in mammalian cells. This family also includes prokaryotic FATPs. FATPs are the key players in the trafficking of exogenous fatty acids into the cell and in intracellular fatty acid homeostasis.
Pssm-ID: 341263 [Multi-domain] Cd Length: 449 Bit Score: 68.53 E-value: 5.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAH-VFELVAESVCLMTGVpigystplTLId 355
Cdd:cd05940 82 DAALYIYTSGTTGLPKAAIISHRRAWRGGAFFAGSGGALPSDVLYTCLPLYHsTALIVGWSACLASGA--------TLV- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 356 tsskIKRgcKGDATVLKPTCM----TSVPLIldriskgindkvnsgsafkKSLFKFLYQYKVKWVQRGYKtplidklvfk 431
Cdd:cd05940 153 ----IRK--KFSASNFWDDIRkyqaTIFQYI-------------------GELCRYLLNQPPKPTERKHK---------- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 432 kvaklmggkVRIIMSGGapLSADTHEQIKTCLCLELI-QGYGLTETTSGATVMDYRDMTYGRTGGPLT-VCDIRLVNWEE 509
Cdd:cd05940 198 ---------VRMIFGNG--LRPDIWEEFKERFGVPRIaEFYAATEGNSGFINFFGKPGAIGRNPSLLRkVAPLALVKYDL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 510 GNYRVTN------KPYPQGEVligGECVS--------QGYYKlPGKTNE----DFFEeDGQRWFKTGDIGEIQADGVLKI 571
Cdd:cd05940 267 ESGEPIRdaegrcIKVPRGEP---GLLISrinplepfDGYTD-PAATEKkilrDVFK-KGDAWFNTGDLMRLDGEGFWYF 341
|
330 340 350
....*....|....*....|....*....|....*...
gi 24586634 572 IDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVYG 609
Cdd:cd05940 342 VDRLGDTFRWK-GENVSTTEVAAVLGAFPGVEEANVYG 378
|
|
| 23DHB-AMP_lg |
cd05920 |
2,3-dihydroxybenzoate-AMP ligase; 2,3-dihydroxybenzoate-AMP ligase activates 2, ... |
277-676 |
6.93e-12 |
|
2,3-dihydroxybenzoate-AMP ligase; 2,3-dihydroxybenzoate-AMP ligase activates 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate. However, it can also catalyze the ATP-PPi exchange for 2,3-DHB analogs, such as salicyclic acid (o-hydrobenzoate), as well as 2,4-DHB and 2,5-DHB, but with less efficiency. Proteins in this family are the stand-alone adenylation components of non-ribosomal peptide synthases (NRPSs) involved in the biosynthesis of siderophores, which are low molecular weight iron-chelating compounds synthesized by many bacteria to aid in the acquisition of this vital trace elements. In Escherichia coli, the 2,3-dihydroxybenzoate-AMP ligase is called EntE, the adenylation component of the enterobactin NRPS system.
Pssm-ID: 341244 [Multi-domain] Cd Length: 482 Bit Score: 68.51 E-value: 6.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 277 DIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAESV--CLMTGvpigystpltli 354
Cdd:cd05920 140 EVALFLLSGGTTGTPKLIPRTHNDYAYNVRASAEVCGLDQDTVYLAVLPAAHNFPLACPGVlgTLLAG------------ 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 dtsskikrGCkgdaTVL--KPTCMTSVPLIlDRiskginDKVNSgSAFKKSLFKFlyqykvkWVQRGYKTPLIDklvfkk 432
Cdd:cd05920 208 --------GR----VVLapDPSPDAAFPLI-ER------EGVTV-TALVPALVSL-------WLDAAASRRADL------ 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 433 vaklmgGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGRTGG-PLTVCD-IRLVNwEEG 510
Cdd:cd05920 255 ------SSLRLLQVGGARLSPALARRVPPVLGCTLQQVFGMAEGLLNYTRLDDPDEVIIHTQGrPMSPDDeIRVVD-EEG 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 511 NyrvtnkPYPQGEV---LIGGECVSQGYYKLPgKTNEDFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYV 587
Cdd:cd05920 328 N------PVPPGEEgelLTRGPYTIRGYYRAP-EHNARAFTPDG--FYRTGDLVRRTPDGYLVVEGRIKDQIN-RGGEKI 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 588 SLGKVESELKTcgiienicvygDPTKQYTVALVVPNQNhleelaqkhgLGDKSfeelCSSPIIEKAILK--EIAEHARKC 665
Cdd:cd05920 398 AAEEVENLLLR-----------HPAVHDAAVVAMPDEL----------LGERS----CAFVVLRDPPPSaaQLRRFLRER 452
|
410
....*....|.
gi 24586634 666 KLQKYEVPAAI 676
Cdd:cd05920 453 GLAAYKLPDRI 463
|
|
| A_NRPS_ProA |
cd17656 |
gramicidin S synthase 2, also known as ATP-dependent proline adenylase; This family of the ... |
135-624 |
1.06e-11 |
|
gramicidin S synthase 2, also known as ATP-dependent proline adenylase; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) contains gramicidin S synthase 2 (also known as ATP-dependent proline adenylase or proline activase or ProA). ProA is a multifunctional enzyme involved in synthesis of the cyclic peptide antibiotic gramicidin S and able to activate and polymerize the amino acids proline, valine, ornithine and leucine. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.
Pssm-ID: 341311 [Multi-domain] Cd Length: 479 Bit Score: 67.88 E-value: 1.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHcitetevttvitshd 214
Cdd:cd17656 15 TYRELNERSNQLARFLREKGVKKDSIVAIMMERSAEMIVGILGILKAGGAFVPIDPEYPEERRIY--------------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 215 llpkfkTLLDK-CPLVKTIIYIEDQLQKTETTgfkegvkILPFNQVVKTGQDSKFEHVPpKGDDIAIIMYTSGSTGTPKG 293
Cdd:cd17656 80 ------IMLDSgVRVVLTQRHLKSKLSFNKST-------ILLEDPSISQEDTSNIDYIN-NSDDLLYIIYTSGTTGKPKG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 294 VLLSHKNCIATMK-GFVDMVPIYPDDVLigflplahVFELVAESVCLMTGVpigySTPL---TLIDTSSKIKRgckgdat 369
Cdd:cd17656 146 VQLEHKNMVNLLHfEREKTNINFSDKVL--------QFATCSFDVCYQEIF----STLLsggTLYIIREETKR------- 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 370 vlkptcmtSVPLILDRISKGINDKVNSGSAFKKSLFKflyqykvkwvQRGYKTPLidklvFKKVAKLMGGKVRIIMSGga 449
Cdd:cd17656 207 --------DVEQLFDLVKRHNIEVVFLPVAFLKFIFS----------EREFINRF-----PTCVKHIITAGEQLVITN-- 261
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 450 PLSADTHEqiKTClclELIQGYGLTETTsgaTVMDYR------DMTYGRTGGPLTVCDIRLVNWEEgnyrvtnKPYPQG- 522
Cdd:cd17656 262 EFKEMLHE--HNV---HLHNHYGPSETH---VVTTYTinpeaeIPELPPIGKPISNTWIYILDQEQ-------QLQPQGi 326
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 523 --EVLIGGECVSQGYYKLPGKTNEDFFE---EDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELK 597
Cdd:cd17656 327 vgELYISGASVARGYLNRQELTAEKFFPdpfDPNERMYRTGDLARYLPDGNIEFLGRADHQVKIR-GYRIELGEIEAQLL 405
|
490 500 510
....*....|....*....|....*....|
gi 24586634 598 TCGIIEN--ICVYGDPTKQ-YTVALVVPNQ 624
Cdd:cd17656 406 NHPGVSEavVLDKADDKGEkYLCAYFVMEQ 435
|
|
| PRK08162 |
PRK08162 |
acyl-CoA synthetase; Validated |
265-596 |
1.32e-11 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 236169 [Multi-domain] Cd Length: 545 Bit Score: 67.66 E-value: 1.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 265 DSKFEHVPPKGDDIAIIM-YTSGSTGTPKGVLLSHK----NCIATMKGFvDMvPIYPddVLIGFLPLAH----------- 328
Cdd:PRK08162 170 DPDFAWTLPADEWDAIALnYTSGTTGNPKGVVYHHRgaylNALSNILAW-GM-PKHP--VYLWTLPMFHcngwcfpwtva 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 329 ----------------VFELVAE-SVCLMTGVPIGYSTpltLIDTSSKIKRGckgdatvlkptcmtsvplildriskgIN 391
Cdd:PRK08162 246 aragtnvclrkvdpklIFDLIREhGVTHYCGAPIVLSA---LINAPAEWRAG--------------------------ID 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 392 DKVNSgsafkkslfkflyqykvkwvqrgyktplidklvfkkvaklmggkvriiMSGGAPLSADTHEQIKTcLCLELIQGY 471
Cdd:PRK08162 297 HPVHA------------------------------------------------MVAGAAPPAAVIAKMEE-IGFDLTHVY 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 472 GLTETTSGATV-----------MDYRDMTYGRTGGP------LTVCDirlvnweegnyRVTNKPYP-----QGEVLIGGE 529
Cdd:PRK08162 328 GLTETYGPATVcawqpewdalpLDERAQLKARQGVRyplqegVTVLD-----------PDTMQPVPadgetIGEIMFRGN 396
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 530 CVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESEL 596
Cdd:PRK08162 397 IVMKGYLKNPKATEEAF--AGG--WFHTGDLAVLHPDGYIKIKDRSKDII-ISGGENISSIEVEDVL 458
|
|
| PRK06188 |
PRK06188 |
acyl-CoA synthetase; Validated |
267-579 |
4.00e-11 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 235731 [Multi-domain] Cd Length: 524 Bit Score: 66.16 E-value: 4.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 267 KFEHVPPK----GDDIAIIMYTSGSTGTPKGVLLSHKnCIATMkgfvdMVPIYPDdvligflplahvFELVAESVCLMTg 342
Cdd:PRK06188 155 KFGPAPLVaaalPPDIAGLAYTGGTTGKPKGVMGTHR-SIATM-----AQIQLAE------------WEWPADPRFLMC- 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 343 VPIGYSTPLTLIDTsskIKRGckGDATVLKPTCMTSVpliLDRISKginDKVNsgsafkkslFKFLYQYKVkwvqrgYKt 422
Cdd:PRK06188 216 TPLSHAGGAFFLPT---LLRG--GTVIVLAKFDPAEV---LRAIEE---QRIT---------ATFLVPTMI------YA- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 423 pLID--KLVFKKVAKLmggkvRIIMSGGAPLS----ADTHEQIKTCLclelIQGYGLTETTSGATVMDYRDM------TY 490
Cdd:PRK06188 269 -LLDhpDLRTRDLSSL-----ETVYYGASPMSpvrlAEAIERFGPIF----AQYYGQTEAPMVITYLRKRDHdpddpkRL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 491 GRTGGPLTVCDIRLVNwEEGNyrvtnkPYPQGEVligGE-CVS-----QGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQ 564
Cdd:PRK06188 339 TSCGRPTPGLRVALLD-EDGR------EVAQGEV---GEiCVRgplvmDGYWNRPEETAEAF--RDG--WLHTGDVARED 404
|
330
....*....|....*
gi 24586634 565 ADGVLKIIDRKKDLV 579
Cdd:PRK06188 405 EDGFYYIVDRKKDMI 419
|
|
| caiC |
PRK08008 |
putative crotonobetaine/carnitine-CoA ligase; Validated |
269-623 |
4.59e-11 |
|
putative crotonobetaine/carnitine-CoA ligase; Validated
Pssm-ID: 181195 [Multi-domain] Cd Length: 517 Bit Score: 65.86 E-value: 4.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 269 EHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIatMKGFVD--MVPIYPDDVLIGFLPLAHV-FELVAESVCLMTGvpi 345
Cdd:PRK08008 166 YAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLR--FAGYYSawQCALRDDDVYLTVMPAFHIdCQCTAAMAAFSAG--- 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 346 gySTpLTLIDTSSK---IKRGCKGDATVLKptCMtsvPLILdriskgindkvnsgsafkKSLfkfLYQYKVKWvQRGYKt 422
Cdd:PRK08008 241 --AT-FVLLEKYSArafWGQVCKYRATITE--CI---PMMI------------------RTL---MVQPPSAN-DRQHC- 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 423 pLIDKLVFkkvaklmggkvriimsggAPLSADTHEQIKTCLCLELIQGYGLTETTSGA---TVMDYRDM-TYGRTGgplt 498
Cdd:PRK08008 290 -LREVMFY------------------LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIigdRPGDKRRWpSIGRPG---- 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 499 vcdirlVNWEEGNYRVTNKPYPQGEVligGE-CVS--------QGYYKLPGKTnEDFFEEDGqrWFKTGDIGEIQADGVL 569
Cdd:PRK08008 347 ------FCYEAEIRDDHNRPLPAGEI---GEiCIKgvpgktifKEYYLDPKAT-AKVLEADG--WLHTGDTGYVDEEGFF 414
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 570 KIIDRKKDLVKlQAGEYVSLGKVESELKTCGIIENICVYG--DPTKQYTV-ALVVPN 623
Cdd:PRK08008 415 YFVDRRCNMIK-RGGENVSCVELENIIATHPKIQDIVVVGikDSIRDEAIkAFVVLN 470
|
|
| PRK08180 |
PRK08180 |
feruloyl-CoA synthase; Reviewed |
249-666 |
2.47e-10 |
|
feruloyl-CoA synthase; Reviewed
Pssm-ID: 236175 [Multi-domain] Cd Length: 614 Bit Score: 63.74 E-value: 2.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 249 EGVKILPFNQVVKT----GQDSKFEHVPPkgDDIAIIMYTSGSTGTPKGVLLSHKN-CI------ATMKGFVDMVPiypd 317
Cdd:PRK08180 180 PGRAATPFAALLATpptaAVDAAHAAVGP--DTIAKFLFTSGSTGLPKAVINTHRMlCAnqqmlaQTFPFLAEEPP---- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 318 dVLIGFLPLAHVFelvaesvclmtgvpiGYSTPLTL---------ID----TSSKIkrgckgDATV--LK---PTCMTSV 379
Cdd:PRK08180 254 -VLVDWLPWNHTF---------------GGNHNLGIvlynggtlyIDdgkpTPGGF------DETLrnLReisPTVYFNV 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 380 PlildrisKG---INDKVNSGSAFKKSLFkflyqykvkwvqrgyktplidklvfkkvaklmgGKVRIIMSGGAPLSADTH 456
Cdd:PRK08180 312 P-------KGwemLVPALERDAALRRRFF---------------------------------SRLKLLFYAGAALSQDVW 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 457 EQIKTC---LCLELIQ---GYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVnweegnyrvtnkpyPQG---EVLIG 527
Cdd:PRK08180 352 DRLDRVaeaTCGERIRmmtGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLV--------------PVGgklEVRVK 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 528 GECVSQGYYKLPGKTNEdFFEEDGqrWFKTGDIGE----------IQADGvlkiidRKKDLVKLQAGEYVSLG----KVE 593
Cdd:PRK08180 418 GPNVTPGYWRAPELTAE-AFDEEG--YYRSGDAVRfvdpadpergLMFDG------RIAEDFKLSSGTWVSVGplraRAV 488
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24586634 594 SELKtcGIIENICVYGdPTKQYTVALVVPNQNHLEELAqkhGLG-DKSFEELCSSPIIEKAILKEIAEHARKCK 666
Cdd:PRK08180 489 SAGA--PLVQDVVITG-HDRDEIGLLVFPNLDACRRLA---GLLaDASLAEVLAHPAVRAAFRERLARLNAQAT 556
|
|
| PRK05851 |
PRK05851 |
long-chain-fatty acid--ACP ligase MbtM; |
250-584 |
3.35e-10 |
|
long-chain-fatty acid--ACP ligase MbtM;
Pssm-ID: 180289 [Multi-domain] Cd Length: 525 Bit Score: 63.25 E-value: 3.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 250 GVKILPFNQVVKTGQDSKFEHVPPKGddIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPD-DVLIGFLPLAH 328
Cdd:PRK05851 128 SVTVHDLATAAHTNRSASLTPPDSGG--PAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAAtDVGCSWLPLYH 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 329 VFELVAESVCLMTGVPigystpltlidtsskikrgckgdaTVLKPTcmtsvplildriskgindkvnsgSAFKKSLFKFL 408
Cdd:PRK05851 206 DMGLAFLLTAALAGAP------------------------LWLAPT-----------------------TAFSASPFRWL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 409 yqykvKWVQRGYKT----P-----LIDKLVfKKVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCL------ELIQGYGL 473
Cdd:PRK05851 239 -----SWLSDSRATltaaPnfaynLIGKYA-RRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPfgfdagAAAPSYGL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 474 TETTSGATV--------MDYRDM-------TYGRTGGPLTVCDIRLvnwEEGNYRVTNKPYPQGEVLIGGECVSQGYykl 538
Cdd:PRK05851 313 AESTCAVTVpvpgiglrVDEVTTddgsgarRHAVLGNPIPGMEVRI---SPGDGAAGVAGREIGEIEIRGASMMSGY--- 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 24586634 539 pgkTNEDFFEEDGqrWFKTGDIGEIQADGvLKIIDRKKDLVKLqAG 584
Cdd:PRK05851 387 ---LGQAPIDPDD--WFPTGDLGYLVDGG-LVVCGRAKELITV-AG 425
|
|
| PRK06178 |
PRK06178 |
acyl-CoA synthetase; Validated |
272-626 |
3.80e-10 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 235724 [Multi-domain] Cd Length: 567 Bit Score: 63.14 E-value: 3.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 272 PPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDM-VPIYPDDVLIGFLPLahvFELVAESVCLMtgVPIGYSTP 350
Cdd:PRK06178 205 PPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVaVVGGEDSVFLSFLPE---FWIAGENFGLL--FPLFSGAT 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LTLIdtsskikrgCKGDATvlkpTCMTSVPlildriskgiNDKVNSGSAFKKSLFKFL-----YQYKVKWVQRGYKTPLI 425
Cdd:PRK06178 280 LVLL---------ARWDAV----AFMAAVE----------RYRVTRTVMLVDNAVELMdhprfAEYDLSSLRQVRVVSFV 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 426 DKL---VFKKVAKLMGGkvriIMSGGAplsadtheqiktclcleliqgYGLTET------TSGATVMDYrDMTYGRT--G 494
Cdd:PRK06178 337 KKLnpdYRQRWRALTGS----VLAEAA---------------------WGMTEThtcdtfTAGFQDDDF-DLLSQPVfvG 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 495 GPLTVCDIRLVNWEEGnyrvtnKPYP---QGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKI 571
Cdd:PRK06178 391 LPVPGTEFKICDFETG------ELLPlgaEGEIVVRTPSLLKGYWNKPEATAEAL--RDG--WLHTGDIGKIDEQGFLHY 460
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 572 IDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVYG--DPTK-QYTVALVVPNQNH 626
Cdd:PRK06178 461 LGRRKEMLKVN-GMSVFPSEVEALLGQHPAVLGSAVVGrpDPDKgQVPVAFVQLKPGA 517
|
|
| PRK07470 |
PRK07470 |
acyl-CoA synthetase; Validated |
276-622 |
4.29e-10 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 180988 [Multi-domain] Cd Length: 528 Bit Score: 62.75 E-value: 4.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 276 DDIAIIMYTSGSTGTPKGVLLSHknciATMkGFV------DMVP-IYPDDVLIGFLPLAHvfelvaesvclmtGVPIGYs 348
Cdd:PRK07470 163 DDPCWFFFTSGTTGRPKAAVLTH----GQM-AFVitnhlaDLMPgTTEQDASLVVAPLSH-------------GAGIHQ- 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 349 tpltLIDTSskikrgcKGDATVLKPTcmtsvplildriskginDKVNSGSAFKkslfkFLYQYKVKWVqrgYKTPLIDKL 428
Cdd:PRK07470 224 ----LCQVA-------RGAATVLLPS-----------------ERFDPAEVWA-----LVERHRVTNL---FTVPTILKM 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 429 VFK--KVAKLMGGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVM-----DYRDMT--------YGRT 493
Cdd:PRK07470 268 LVEhpAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLppalhDAEDGPdarigtcgFERT 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 494 GGPLTVCDirlvnwEEGNyrvTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIID 573
Cdd:PRK07470 348 GMEVQIQD------DEGR---ELPPGETGEICVIGPAVFAGYYNNPEANAKAF--RDG--WFRTGDLGHLDARGFLYITG 414
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 574 RKKDLvklqageYVSLG------KVESELKTCGIIENICVYG--DPT-KQYTVALVVP 622
Cdd:PRK07470 415 RASDM-------YISGGsnvyprEIEEKLLTHPAVSEVAVLGvpDPVwGEVGVAVCVA 465
|
|
| PRK08315 |
PRK08315 |
AMP-binding domain protein; Validated |
214-579 |
1.02e-09 |
|
AMP-binding domain protein; Validated
Pssm-ID: 236236 [Multi-domain] Cd Length: 559 Bit Score: 61.75 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 214 DLLPKFKTL------LDKCPLVKTIIYIEDQlqktETTGFkegvkiLPFNQVVKTGQDSKFEHVPP-----KGDDIAIIM 282
Cdd:PRK08315 136 ELAPELATCepgqlqSARLPELRRVIFLGDE----KHPGM------LNFDELLALGRAVDDAELAArqatlDPDDPINIQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 283 YTSGSTGTPKGVLLSHKNCI-------ATMKgfvdmvpIYPDDVLIGFLPLAHVFELV-AESVCLMTG---VPIGYS-TP 350
Cdd:PRK08315 206 YTSGTTGFPKGATLTHRNILnngyfigEAMK-------LTEEDRLCIPVPLYHCFGMVlGNLACVTHGatmVYPGEGfDP 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 351 LTLIDTSSKIKrgCkgdaTVLK--PT---CMTSVPLI----LDRISKGINdkvnSGSafkkslfkflyqykvkwvqrgyk 421
Cdd:PRK08315 279 LATLAAVEEER--C----TALYgvPTmfiAELDHPDFarfdLSSLRTGIM----AGS----------------------- 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 422 TPLIDklVFKKVAKLMGgkvriiMSggaplsadtheqiktclclELIQGYGLTETTSGatvmdyrdMTYGRTGGPL---- 497
Cdd:PRK08315 326 PCPIE--VMKRVIDKMH------MS-------------------EVTIAYGMTETSPV--------STQTRTDDPLekrv 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 -TV------CDIRLVNWEEGNyrvTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFfeeDGQRWFKTGDIGEIQADGVLK 570
Cdd:PRK08315 371 tTVgralphLEVKIVDPETGE---TVPRGEQGELCTRGYSVMKGYWNDPEKTAEAI---DADGWMHTGDLAVMDEEGYVN 444
|
....*....
gi 24586634 571 IIDRKKDLV 579
Cdd:PRK08315 445 IVGRIKDMI 453
|
|
| FACL_like_1 |
cd05910 |
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ... |
273-579 |
1.24e-09 |
|
Uncharacterized subfamily of fatty acid CoA ligase (FACL); Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341236 [Multi-domain] Cd Length: 457 Bit Score: 60.94 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 273 PKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFelvaesvclmtGVPIGYSTPLT 352
Cdd:cd05910 82 PKADEPAAILFTSGSTGTPKGVVYRHGTFAAQIDALRQLYGIRPGEVDLATFPLFALF-----------GPALGLTSVIP 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 353 LIDtsskikrgckgdatvlkPTCmtsvplildriskgindkvnSGSAFKKSLFKFLYQYKVKWVqrgYKTPLIDKLVFKK 432
Cdd:cd05910 151 DMD-----------------PTR--------------------PARADPQKLVGAIRQYGVSIV---FGSPALLERVARY 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 433 VAK--LMGGKVRIIMSGGAPLSADTHEQIKTCLC--LELIQGYGLTETTSGATVMDyRDMTYGRT-----------GGPL 497
Cdd:cd05910 191 CAQhgITLPSLRRVLSAGAPVPIALAARLRKMLSdeAEILTPYGATEALPVSSIGS-RELLATTTaatsggagtcvGRPI 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 498 TVCDIRLVNWEEGNYRVTNK-----PYPQGEVLIGGECVSQGYYKLPGKTN-EDFFEEDGQRWFKTGDIGEIQADGVLKI 571
Cdd:cd05910 270 PGVRVRIIEIDDEPIAEWDDtlelpRGEIGEITVTGPTVTPTYVNRPVATAlAKIDDNSEGFWHRMGDLGYLDDEGRLWF 349
|
....*...
gi 24586634 572 IDRKKDLV 579
Cdd:cd05910 350 CGRKAHRV 357
|
|
| PRK05691 |
PRK05691 |
peptide synthase; Validated |
279-678 |
2.17e-09 |
|
peptide synthase; Validated
Pssm-ID: 235564 [Multi-domain] Cd Length: 4334 Bit Score: 61.34 E-value: 2.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 279 AIIMYTSGSTGTPKGVLLSH----KNCIATMKGFvDMvpiYPDDVLIGFLPLAhvFELVAESVClmtgvpigysTPLTli 354
Cdd:PRK05691 2336 AYLIYTSGSTGKPKGVVVSHgeiaMHCQAVIERF-GM---RADDCELHFYSIN--FDAASERLL----------VPLL-- 2397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 355 dtsskikrgCkGDATVLKPTCMTSVplilDRISKGINDKVNSGSAFKKSLFKFLYQYKVKwvqRGYKTPlidklvfkkva 434
Cdd:PRK05691 2398 ---------C-GARVVLRAQGQWGA----EEICQLIREQQVSILGFTPSYGSQLAQWLAG---QGEQLP----------- 2449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 435 klmggkVRIIMSGGAPLSADTHEQIKTCLCLELI-QGYGLTETTsgatVM------------DYRDMTYGRTGGPLT--V 499
Cdd:PRK05691 2450 ------VRMCITGGEALTGEHLQRIRQAFAPQLFfNAYGPTETV----VMplaclapeqleeGAASVPIGRVVGARVayI 2519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 500 CDIRLVnweegnyrvtnkPYPQG---EVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKII 572
Cdd:PRK05691 2520 LDADLA------------LVPQGatgELYVGGAGLAQGYHDRPGLTAERFvadpFAADGGRLYRTGDLVRLRADGLVEYV 2587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 573 DRKKDLVKLQaGEYVSLGKVESELKTCGIIENICV--YGDPTKQYTVALVVPNQNHLEELAQkhglgdksfeelcsspii 650
Cdd:PRK05691 2588 GRIDHQVKIR-GFRIELGEIESRLLEHPAVREAVVlaLDTPSGKQLAGYLVSAVAGQDDEAQ------------------ 2648
|
410 420
....*....|....*....|....*...
gi 24586634 651 ekAILKEIAEHARKCKLQKYEVPAAITL 678
Cdd:PRK05691 2649 --AALREALKAHLKQQLPDYMVPAHLIL 2674
|
|
| PRK08279 |
PRK08279 |
long-chain-acyl-CoA synthetase; Validated |
113-342 |
3.30e-09 |
|
long-chain-acyl-CoA synthetase; Validated
Pssm-ID: 236217 [Multi-domain] Cd Length: 600 Bit Score: 59.89 E-value: 3.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 113 EDEVQQNG-RVFKKYNLGDYkwkTFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFK----QAMpIVT 187
Cdd:PRK08279 44 EEAAARHPdRPALLFEDQSI---SYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKlgavVAL-LNT 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 188 vyaTLGDDGVAHCITETEVTTVITSHDLLPKFKTLLDkCPLVKTIIYIEDQLQKTETTGFKEGVKIL----PFNQVVKtg 263
Cdd:PRK08279 120 ---QQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARA-DLARPPRLWVAGGDTLDDPEGYEDLAAAAagapTTNPASR-- 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 264 qdskfEHVPpkGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAH-VFELVAESVCLMTG 342
Cdd:PRK08279 194 -----SGVT--AKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHnTGGTVAWSSVLAAG 266
|
|
| PRK08279 |
PRK08279 |
long-chain-acyl-CoA synthetase; Validated |
275-702 |
4.54e-09 |
|
long-chain-acyl-CoA synthetase; Validated
Pssm-ID: 236217 [Multi-domain] Cd Length: 600 Bit Score: 59.50 E-value: 4.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAH-VFELVAESVCLMTGvpigystpltl 353
Cdd:PRK08279 198 AKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHnTGGTVAWSSVLAAG----------- 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 354 idtsskikrgckgdATvlkptcmtsvpLILDRiskgindKVnSGSAF-------KKSLF-------KFLYQYKVKWVQRG 419
Cdd:PRK08279 267 --------------AT-----------LALRR-------KF-SASRFwddvrryRATAFqyigelcRYLLNQPPKPTDRD 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 420 YKtplidklvfkkvaklmggkVRIIMsgGAPLSADTHEQIKTCLCLELI-QGYGLTETTSGATVMDYRDMTYGRTGGPLT 498
Cdd:PRK08279 314 HR-------------------LRLMI--GNGLRPDIWDEFQQRFGIPRIlEFYAASEGNVGFINVFNFDGTVGRVPLWLA 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 499 VcDIRLVNW----------EEGNYRVTNKpypqGEVligGECVSQ--------GYYKlPGKTNE----DFFEeDGQRWFK 556
Cdd:PRK08279 373 H-PYAIVKYdvdtgepvrdADGRCIKVKP----GEV---GLLIGRitdrgpfdGYTD-PEASEKkilrDVFK-KGDAWFN 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 557 TGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVYGdptkqytVAlvVPNQNHLEELAQKHGL 636
Cdd:PRK08279 443 TGDLMRDDGFGHAQFVDRLGDTFRWK-GENVATTEVENALSGFPGVEEAVVYG-------VE--VPGTDGRAGMAAIVLA 512
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24586634 637 GDKSFEelcsspiiekaiLKEIAEHARKCkLQKYEVPAAITLCKEVwspDMglvTAAFKLKRKDIQ 702
Cdd:PRK08279 513 DGAEFD------------LAALAAHLYER-LPAYAVPLFVRLVPEL---ET---TGTFKYRKVDLR 559
|
|
| PLN02479 |
PLN02479 |
acetate-CoA ligase |
232-615 |
5.78e-09 |
|
acetate-CoA ligase
Pssm-ID: 178097 [Multi-domain] Cd Length: 567 Bit Score: 59.09 E-value: 5.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 232 IIYIEDQLQKTETTGFKEGVKILPFNQVVKTGqDSKFEHVPPKGDDIAIIM-YTSGSTGTPKGVLLSHKNCIaTMKGFVD 310
Cdd:PLN02479 151 LIVIGDPTCDPKSLQYALGKGAIEYEKFLETG-DPEFAWKPPADEWQSIALgYTSGTTASPKGVVLHHRGAY-LMALSNA 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 311 MVPIYPDD-VLIGFLPLAHvfelvAESVCLMTGVPIGYSTPLTLIDTSSKIKRGCKGDATVlkpTCMTSVPLILDRIskg 389
Cdd:PLN02479 229 LIWGMNEGaVYLWTLPMFH-----CNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGV---THFCAAPVVLNTI--- 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 390 indkVNSGSAfkkslfkflyqykvkwvQRGYKTPLIdklvfkkvaklmggkVRIIMSGGAP----LSADTHEQIKtclcl 465
Cdd:PLN02479 298 ----VNAPKS-----------------ETILPLPRV---------------VHVMTAGAAPppsvLFAMSEKGFR----- 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 466 eLIQGYGLTETTSGATV-----------MDYRDMTYGRTGgpltvcdIRLVNWEEGNY--RVTNKPYPQ-----GEVLIG 527
Cdd:PLN02479 337 -VTHTYGLSETYGPSTVcawkpewdslpPEEQARLNARQG-------VRYIGLEGLDVvdTKTMKPVPAdgktmGEIVMR 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 528 GECVSQGYYKLPgKTNEDFFEEDgqrWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTCGIIENICV 607
Cdd:PLN02479 409 GNMVMKGYLKNP-KANEEAFANG---WFHSGDLGVKHPDGYIEIKDRSKDII-ISGGENISSLEVENVVYTHPAVLEASV 483
|
....*...
gi 24586634 608 YGDPTKQY 615
Cdd:PLN02479 484 VARPDERW 491
|
|
| A_NRPS_LgrA-like |
cd17645 |
adenylation (A) domain of linear gramicidin synthetase (LgrA) and similar proteins; This ... |
264-622 |
7.69e-09 |
|
adenylation (A) domain of linear gramicidin synthetase (LgrA) and similar proteins; This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes linear gramicidin synthetase (LgrA) in Brevibacillus brevis. LgrA has a formylation domain fused to the N-terminal end that formylates its substrate for linear gramicidin synthesis to proceed. This formyl group is essential for the clinically important antibacterial activity of gramicidin by enabling head-to-head gramicidin dimers to make a beta-helical pore in gram-positive bacterial membranes, allowing free passage of monovalent cations, destroying the ion gradient and killing bacteria. This family also includes bacitracin synthetase 1 (known as ATP-dependent cysteine adenylase or BA1); it activates cysteine, incorporates two D-amino acids, releases and cyclizes the mature bacitracin, an antibiotic that is a mixture of related cyclic peptides that disrupt gram positive bacteria by interfering with cell wall and peptidoglycan synthesis. Also included is surfactin synthetase which activates and polymerizes the amino acids Leu, Glu, Asp, and Val to form the antibiotic surfactin.
Pssm-ID: 341300 [Multi-domain] Cd Length: 440 Bit Score: 58.33 E-value: 7.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 264 QDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNciatmkgfvdmvpiypddvLIGFLPLAH-VFELVAEsvclmtg 342
Cdd:cd17645 92 ADSSAKILLTNPDDLAYVIYTSGSTGLPKGVMIEHHN-------------------LVNLCEWHRpYFGVTPA------- 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 343 vpigystpltliDTSSKIKrGCKGDATVLK--PTCMTSVPL-ILDRISKGINDKVNSGSAFKKSLFKFLyqykvkwvqrg 419
Cdd:cd17645 146 ------------DKSLVYA-SFSFDASAWEifPHLTAGAALhVVPSERRLDLDALNDYFNQEGITISFL----------- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 420 yKTPLIDKLVfkkvaKLMGGKVRIIMSGGAPLSADTHEQIKtclcleLIQGYGLTETTSGATVMD----YRDMTYGRTgg 495
Cdd:cd17645 202 -PTGAAEQFM-----QLDNQSLRVLLTGGDKLKKIERKGYK------LVNNYGPTENTVVATSFEidkpYANIPIGKP-- 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 496 pltVCDIRLVNWEEGNyrvtnKPYPQG---EVLIGGECVSQGYYKLPGKTNEDFFEE---DGQRWFKTGDIGEIQADGVL 569
Cdd:cd17645 268 ---IDNTRVYILDEAL-----QLQPIGvagELCIAGEGLARGYLNRPELTAEKFIVHpfvPGERMYRTGDLAKFLPDGNI 339
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 24586634 570 KIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVY------GDPtkqYTVALVVP 622
Cdd:cd17645 340 EFLGRLDQQVKIR-GYRIEPGEIEPFLMNHPLIELAAVLakedadGRK---YLVAYVTA 394
|
|
| CBAL |
cd05923 |
4-Chlorobenzoate-CoA ligase (CBAL); CBAL catalyzes the conversion of 4-chlorobenzoate (4-CB) ... |
250-638 |
8.21e-09 |
|
4-Chlorobenzoate-CoA ligase (CBAL); CBAL catalyzes the conversion of 4-chlorobenzoate (4-CB) to 4-chlorobenzoyl-coenzyme A (4-CB-CoA) by the two-step adenylation and thioester-forming reactions. 4-Chlorobenzoate (4-CBA) is an environmental pollutant derived from microbial breakdown of aromatic pollutants, such as polychlorinated biphenyls (PCBs), DDT, and certain herbicides. The 4-CBA degrading pathway converts 4-CBA to the metabolite 4-hydroxybezoate (4-HBA), allowing some soil-dwelling microbes to utilize 4-CBA as an alternate carbon source. This pathway consists of three chemical steps catalyzed by 4-CBA-CoA ligase, 4-CBA-CoA dehalogenase, and 4HBA-CoA thioesterase in sequential reactions.
Pssm-ID: 341247 [Multi-domain] Cd Length: 493 Bit Score: 58.67 E-value: 8.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 250 GVKILPFNQVVKTGQDSKF----EHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNC------IATMKGFvdmvpIYPD-D 318
Cdd:cd05923 120 GVRVLALSDLVGLGEPESAgpliEDPPREPEQPAFVFYTSGTTGLPKGAVIPQRAAesrvlfMSTQAGL-----RHGRhN 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 319 VLIGFLPLAHV---FELVAESVCL-MTGVPIGYSTP---LTLIDTsskikrgckgdatvLKPTCMTSVPLILDRISKGIn 391
Cdd:cd05923 195 VVLGLMPLYHVigfFAVLVAALALdGTYVVVEEFDPadaLKLIEQ--------------ERVTSLFATPTHLDALAAAA- 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 392 dkvnsgsafkkslfkflyqykvkwVQRGYKTPLIDKLVFkkvaklmggkvriimsGGAPLSADTHEQIKTCLCLELIQGY 471
Cdd:cd05923 260 ------------------------EFAGLKLSSLRHVTF----------------AGATMPDAVLERVNQHLPGEKVNIY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 472 GLTETTSgATVMdyRDMTYGRTGGPLTVCDIRLVnweegnyRVTNKP---YPQGE-----VLIGGECVSQGYYKLPGKTN 543
Cdd:cd05923 300 GTTEAMN-SLYM--RDARTGTEMRPGFFSEVRIV-------RIGGSPdeaLANGEegeliVAAAADAAFTGYLNQPEATA 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 544 EDFFEedgqRWFKTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVESELKTCGIIENICVYGDPTK---QYTVALV 620
Cdd:cd05923 370 KKLQD----GWYRTGDVGYVDPSGDVRILGRVDDMI-ISGGENIHPSEIERVLSRHPGVTEVVVIGVADErwgQSVTACV 444
|
410 420
....*....|....*....|...
gi 24586634 621 VPNQ-----NHLEELAQKHGLGD 638
Cdd:cd05923 445 VPREgtlsaDELDQFCRASELAD 467
|
|
| PRK05691 |
PRK05691 |
peptide synthase; Validated |
275-596 |
1.08e-08 |
|
peptide synthase; Validated
Pssm-ID: 235564 [Multi-domain] Cd Length: 4334 Bit Score: 59.03 E-value: 1.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 275 GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAhvFELvaeSV--CLMtgvpigystPLT 352
Cdd:PRK05691 1272 GDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPIS--FDV---SVweCFW---------PLI 1337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 353 lidtsskikRGCKgdatvlkptcmtsvpLILdrisKGINDKVNSgsafkkslfkflyQYKVKWVQRGYKT------PLID 426
Cdd:PRK05691 1338 ---------TGCR---------------LVL----AGPGEHRDP-------------QRIAELVQQYGVTtlhfvpPLLQ 1376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 427 KLVFKKVAKLMGgKVRIIMSGGAPLSADTHEQIKTCL-CLELIQGYGLTETTSGATVMDYR--DMTYGRTGGPL--TVCD 501
Cdd:PRK05691 1377 LFIDEPLAAACT-SLRRLFSGGEALPAELRNRVLQRLpQVQLHNRYGPTETAINVTHWQCQaeDGERSPIGRPLgnVLCR 1455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 502 IRlvnweEGNYRVTNKPYPqGEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKIIDRKKD 577
Cdd:PRK05691 1456 VL-----DAELNLLPPGVA-GELCIGGAGLARGYLGRPALTAERFvpdpLGEDGARLYRTGDRARWNADGALEYLGRLDQ 1529
|
330
....*....|....*....
gi 24586634 578 LVKLQaGEYVSLGKVESEL 596
Cdd:PRK05691 1530 QVKLR-GFRVEPEEIQARL 1547
|
|
| PtmA |
cd17636 |
long-chain fatty acid CoA ligase (FadD); This family contains fatty acid CoA ligases, ... |
470-626 |
1.05e-07 |
|
long-chain fatty acid CoA ligase (FadD); This family contains fatty acid CoA ligases, including acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, most of which are yet to be characterized. Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Pssm-ID: 341291 [Multi-domain] Cd Length: 331 Bit Score: 54.23 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 470 GYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNwEEGNyrvtnkPYPQGEVligGECVSQGYYKLPGKTNEDffEE 549
Cdd:cd17636 142 GYGQTEVMGLATFAALGGGAIGGAGRPSPLVQVRILD-EDGR------EVPDGEV---GEIVARGPTVMAGYWNRP--EV 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 550 DGQR----WFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKVESELKTCGIIENICVYG--DPT-KQYTVALVVP 622
Cdd:cd17636 210 NARRtrggWHHTNDLGRREPDGSLSFVGPKTRMIK-SGAENIYPAEVERCLRQHPAVADAAVIGvpDPRwAQSVKAIVVL 288
|
....
gi 24586634 623 NQNH 626
Cdd:cd17636 289 KPGA 292
|
|
| MACS_AAE_MA_like |
cd05970 |
Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like; MACS catalyzes the two-step activation ... |
440-704 |
2.27e-07 |
|
Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like; MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This family of MACS enzymes is found in archaea and bacteria. It is represented by the acyl-adenylating enzyme from Methanosarcina acetivorans (AAE_MA). AAE_MA is most active with propionate, butyrate, and the branched analogs: 2-methyl-propionate, butyrate, and pentanoate. The specific activity is weaker for smaller or larger acids.
Pssm-ID: 341274 [Multi-domain] Cd Length: 537 Bit Score: 54.04 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 440 KVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVNWEegnyrvtNKPY 519
Cdd:cd05970 302 SLRYCTTAGEALNPEVFNTFKEKTGIKLMEGFGQTETTLTIATFPWMEPKPGSMGKPAPGYEIDLIDRE-------GRSC 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 520 PQGEvliGGECVSQ-----------GYYKLPGKTNEDFFeeDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVS 588
Cdd:cd05970 375 EAGE---EGEIVIRtskgkpvglfgGYYKDAEKTAEVWH--DG--YYHTGDAAWMDEDGYLWFVGRTDDLIK-SSGYRIG 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 589 LGKVESELKTCGIIENICVYG--DPTK-QYTVALVVPNQNHleelaqkhglgdKSFEELcsspiiekaiLKEIAEHARKC 665
Cdd:cd05970 447 PFEVESALIQHPAVLECAVTGvpDPIRgQVVKATIVLAKGY------------EPSEEL----------KKELQDHVKKV 504
|
250 260 270
....*....|....*....|....*....|....*....
gi 24586634 666 KlQKYEVPAAITLCKEVwsPDmglvTAAFKLKRKDIQDR 704
Cdd:cd05970 505 T-APYKYPRIVEFVDEL--PK----TISGKIRRVEIRER 536
|
|
| PRK12406 |
PRK12406 |
long-chain-fatty-acid--CoA ligase; Provisional |
281-620 |
5.26e-07 |
|
long-chain-fatty-acid--CoA ligase; Provisional
Pssm-ID: 183506 [Multi-domain] Cd Length: 509 Bit Score: 52.78 E-value: 5.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 281 IMYTSGSTGTPKGVllshKNCIAT---MKGFVDMVpiypddvligflplAHVFELVAESVCLMTGvPIGYSTPltlidTS 357
Cdd:PRK12406 157 MIYTSGTTGHPKGV----RRAAPTpeqAAAAEQMR--------------ALIYGLKPGIRALLTG-PLYHSAP-----NA 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 358 SKIKRGCKGDATVLKP----------------TCMTSVPLILDRISKgINDKVnsgsafkkslfkflyqykvkwvQRGYK 421
Cdd:PRK12406 213 YGLRAGRLGGVLVLQPrfdpeellqlierhriTHMHMVPTMFIRLLK-LPEEV----------------------RAKYD 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 422 TplidklvfkkvaklmgGKVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTET--TSGATVMDYRDMTyGRTGGPLTV 499
Cdd:PRK12406 270 V----------------SSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESgaVTFATSEDALSHP-GTVGKAAPG 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 500 CDIRLVNwEEGnyrvtnKPYPQGEVligGECVSQ-------GYYKLPGKTNEdfFEEDGqrWFKTGDIGEIQADGVLKII 572
Cdd:PRK12406 333 AELRFVD-EDG------RPLPQGEI---GEIYSRiagnpdfTYHNKPEKRAE--IDRGG--FITSGDVGYLDADGYLFLC 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 24586634 573 DRKKDLVkLQAGEYVSLGKVESELKTCGIIENICVYGDPTKQYTVALV 620
Cdd:PRK12406 399 DRKRDMV-ISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALM 445
|
|
| EntE |
COG1021 |
EntE, 2,3-dihydroxybenzoate-AMP synthase component of non-ribosomal peptide synthetase ... |
442-596 |
7.79e-07 |
|
EntE, 2,3-dihydroxybenzoate-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440644 [Multi-domain] Cd Length: 533 Bit Score: 52.46 E-value: 7.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 442 RIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTEttsGATVM----DYRDMTYGRTGGPLTVCD-IRLVNwEEGNyrvtn 516
Cdd:COG1021 303 RVLQVGGAKLSPELARRVRPALGCTLQQVFGMAE---GLVNYtrldDPEEVILTTQGRPISPDDeVRIVD-EDGN----- 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 517 kPYPQGEV---LIGGECVSQGYYKLPGKtNEDFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlQAGEYVSLGKVE 593
Cdd:COG1021 374 -PVPPGEVgelLTRGPYTIRGYYRAPEH-NARAFTPDG--FYRTGDLVRRTPDGYLVVEGRAKDQIN-RGGEKIAAEEVE 448
|
...
gi 24586634 594 SEL 596
Cdd:COG1021 449 NLL 451
|
|
| PRK04319 |
PRK04319 |
acetyl-CoA synthetase; Provisional |
135-319 |
1.35e-06 |
|
acetyl-CoA synthetase; Provisional
Pssm-ID: 235279 [Multi-domain] Cd Length: 570 Bit Score: 51.43 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAmPIVT-VYATLGDDGVAHCITETEVTTVITSH 213
Cdd:PRK04319 75 TYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNG-AIVGpLFEAFMEEAVRDRLEDSEAKVLITTP 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 214 DLLPKFKtlLDKCPLVKTIIYIEDQLqktettgfKEGVKILPFNQVVKTGQDSkFEHVPPKGDDIAIIMYTSGSTGTPKG 293
Cdd:PRK04319 154 ALLERKP--ADDLPSLKHVLLVGEDV--------EEGPGTLDFNALMEQASDE-FDIEWTDREDGAILHYTSGSTGKPKG 222
|
170 180
....*....|....*....|....*....
gi 24586634 294 VLLSHKNCI---ATMKGFVDMvpiYPDDV 319
Cdd:PRK04319 223 VLHVHNAMLqhyQTGKYVLDL---HEDDV 248
|
|
| PRK12476 |
PRK12476 |
putative fatty-acid--CoA ligase; Provisional |
268-579 |
2.10e-06 |
|
putative fatty-acid--CoA ligase; Provisional
Pssm-ID: 171527 [Multi-domain] Cd Length: 612 Bit Score: 50.90 E-value: 2.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 268 FEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKnciATMKGFVDMvpIYPDDVL------IGFLPLAHVFELvaesvcLMT 341
Cdd:PRK12476 185 FVPVELDTDDVSHLQYTSGSTRPPVGVEITHR---AVGTNLVQM--ILSIDLLdrnthgVSWLPLYHDMGL------SMI 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 342 GVPIGYSTPLTLIDTSSKIKRgckgdatvlkptcmtsvPLildRISKGINDKVNSGSAFKKSLfKFLYQYKvkwVQRGYK 421
Cdd:PRK12476 254 GFPAVYGGHSTLMSPTAFVRR-----------------PQ---RWIKALSEGSRTGRVVTAAP-NFAYEWA---AQRGLP 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 422 TPLiDKLVFKKVAklmggkvriIMSGGAPLSADTHEQIKTCLC------LELIQGYGLTETT-----------SGATVMD 484
Cdd:PRK12476 310 AEG-DDIDLSNVV---------LIIGSEPVSIDAVTTFNKAFApyglprTAFKPSYGIAEATlfvatiapdaePSVVYLD 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 485 YRDMTYGRT-----GGPLTVCDIRLVNWEEGNYRVTNKPYPQ--------GEVLIGGECVSQGYYKLPGKTNEDFFE--- 548
Cdd:PRK12476 380 REQLGAGRAvrvaaDAPNAVAHVSCGQVARSQWAVIVDPDTGaelpdgevGEIWLHGDNIGRGYWGRPEETERTFGAklq 459
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 24586634 549 ------------EDGQRWFKTGDIGeIQADGVLKIIDRKKDLV 579
Cdd:PRK12476 460 srlaegshadgaADDGTWLRTGDLG-VYLDGELYITGRIADLI 501
|
|
| PRK05850 |
PRK05850 |
acyl-CoA synthetase; Validated |
271-352 |
2.19e-06 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 235624 [Multi-domain] Cd Length: 578 Bit Score: 51.10 E-value: 2.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIAT----MKGFV---DMVPiYPDDVLIGFLPLAHvfelvaeSVCLMTGV 343
Cdd:PRK05850 155 RPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANfeqlMSDYFgdtGGVP-PPDTTVVSWLPFYH-------DMGLVLGV 226
|
90
....*....|...
gi 24586634 344 --PI--GYSTPLT 352
Cdd:PRK05850 227 caPIlgGCPAVLT 239
|
|
| PRK09192 |
PRK09192 |
fatty acyl-AMP ligase; |
272-341 |
4.35e-06 |
|
fatty acyl-AMP ligase;
Pssm-ID: 236403 [Multi-domain] Cd Length: 579 Bit Score: 50.00 E-value: 4.35e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 24586634 272 PPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFV-DMVPIYPDDVLIGFLPLAHVFELVAesvCLMT 341
Cdd:PRK09192 172 RPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAIShDGLKVRPGDRCVSWLPFYHDMGLVG---FLLT 239
|
|
| ACS |
cd05966 |
Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme); ... |
223-319 |
1.56e-05 |
|
Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme); Acetyl-CoA synthetase (ACS, EC 6.2.1.1, acetate#CoA ligase or acetate:CoA ligase (AMP-forming)) catalyzes the formation of acetyl-CoA from acetate, CoA, and ATP. Synthesis of acetyl-CoA is carried out in a two-step reaction. In the first step, the enzyme catalyzes the synthesis of acetyl-AMP intermediate from acetate and ATP. In the second step, acetyl-AMP reacts with CoA to produce acetyl-CoA. This enzyme is widely present in all living organisms. The activity of this enzyme is crucial for maintaining the required levels of acetyl-CoA, a key intermediate in many important biosynthetic and catabolic processes. Acetyl-CoA is used in the biosynthesis of glucose, fatty acids, and cholesterol. It can also be used in the production of energy in the citric acid cycle. Eukaryotes typically have two isoforms of acetyl-CoA synthetase, a cytosolic form involved in biosynthetic processes and a mitochondrial form primarily involved in energy generation.
Pssm-ID: 341270 [Multi-domain] Cd Length: 608 Bit Score: 48.33 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 223 LDKCPLVKTIIYiedqLQKTET-TGFKEGVKIlPFNQVVKtGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKN- 300
Cdd:cd05966 183 LEKCPSVEKVLV----VKRTGGeVPMTEGRDL-WWHDLMA-KQSPECEPEWMDSEDPLFILYTSGSTGKPKGVVHTTGGy 256
|
90 100
....*....|....*....|..
gi 24586634 301 ---CIATMKGFVDmvpIYPDDV 319
Cdd:cd05966 257 llyAATTFKYVFD---YHPDDI 275
|
|
| PRK05691 |
PRK05691 |
peptide synthase; Validated |
522-699 |
1.84e-05 |
|
peptide synthase; Validated
Pssm-ID: 235564 [Multi-domain] Cd Length: 4334 Bit Score: 48.63 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 522 GEVLIGGECVSQGYYKLPGKTNEDF----FEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELK 597
Cdd:PRK05691 4067 GELCVAGTGVGRGYVGDPLRTALAFvphpFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIR-GYRIELGEIEARLH 4145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 598 TCGIIEN--ICVYGDPTKQYTVALVVPNQNhleelAQKHGlgdksfeelcsspiiekAILKEIAEHARKCkLQKYEVPAA 675
Cdd:PRK05691 4146 EQAEVREaaVAVQEGVNGKHLVGYLVPHQT-----VLAQG-----------------ALLERIKQRLRAE-LPDYMVPLH 4202
|
170 180
....*....|....*....|....
gi 24586634 676 ItlckeVWSPDMGLvTAAFKLKRK 699
Cdd:PRK05691 4203 W-----LWLDRLPL-NANGKLDRK 4220
|
|
| PRK09029 |
PRK09029 |
O-succinylbenzoic acid--CoA ligase; Provisional |
470-574 |
1.95e-05 |
|
O-succinylbenzoic acid--CoA ligase; Provisional
Pssm-ID: 236363 [Multi-domain] Cd Length: 458 Bit Score: 47.56 E-value: 1.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 470 GYGLTETTSgaTVMDYR-DMTYGrTGGPLTVCDIRLVNweegnyrvtnkpypqGEVLIGGECVSQGYYKlPGKTNeDFFE 548
Cdd:PRK09029 270 GYGLTEMAS--TVCAKRaDGLAG-VGSPLPGREVKLVD---------------GEIWLRGASLALGYWR-QGQLV-PLVN 329
|
90 100
....*....|....*....|....*.
gi 24586634 549 EDGqrWFKTGDIGEIQaDGVLKIIDR 574
Cdd:PRK09029 330 DEG--WFATRDRGEWQ-NGELTILGR 352
|
|
| PRK08276 |
PRK08276 |
long-chain-fatty-acid--CoA ligase; Validated |
135-579 |
4.36e-05 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 236215 [Multi-domain] Cd Length: 502 Bit Score: 46.82 E-value: 4.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 135 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAHCITETEVTTVITSHD 214
Cdd:PRK08276 13 TYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 215 LLPKFKTLLDKCPLVKTIIYIEDQlqktETTGFkegvkiLPFNQVVKTGQDSKFEHVPPkGDDIAiimYTSGSTGTPKGV 294
Cdd:PRK08276 93 LADTAAELAAELPAGVPLLLVVAG----PVPGF------RSYEEALAAQPDTPIADETA-GADML---YSSGTTGRPKGI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 295 LlshknciatmkgfVDMVPIYPDDVLIGFL-PLAHVFELVAESVCLMTGvPIGYSTPLTLIDTSSKIkrgckGDATVL-- 371
Cdd:PRK08276 159 K-------------RPLPGLDPDEAPGMMLaLLGFGMYGGPDSVYLSPA-PLYHTAPLRFGMSALAL-----GGTVVVme 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 372 --------------KPTCMTSVPLILDRISKgINDKVNSGsafkkslfkflyqYKVKwvqrgyktplidklvfkkvaklm 437
Cdd:PRK08276 220 kfdaeealalieryRVTHSQLVPTMFVRMLK-LPEEVRAR-------------YDVS----------------------- 262
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 438 ggKVRIIMSGGAPLSADTHEQIktclcLE-----LIQGYGLTEtTSGATVMDYRDM-----TYGRT-GGPLTVCDirlvn 506
Cdd:PRK08276 263 --SLRVAIHAAAPCPVEVKRAM-----IDwwgpiIHEYYASSE-GGGVTVITSEDWlahpgSVGKAvLGEVRILD----- 329
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24586634 507 wEEGNyrvtnkPYPQGEvlIGGECVSQG-----YYKLPGKTNEdffEEDGQRWFKTGDIGEIQADGVLKIIDRKKDLV 579
Cdd:PRK08276 330 -EDGN------ELPPGE--IGTVYFEMDgypfeYHNDPEKTAA---ARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMI 395
|
|
| PRK07769 |
PRK07769 |
long-chain-fatty-acid--CoA ligase; Validated |
244-354 |
4.53e-05 |
|
long-chain-fatty-acid--CoA ligase; Validated
Pssm-ID: 181109 [Multi-domain] Cd Length: 631 Bit Score: 46.65 E-value: 4.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 244 TTGFKEGV----KILPFNQ--------VVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDM 311
Cdd:PRK07769 136 TTDSAEGVrkffRARPAKErprviavdAVPDEVGATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDA 215
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 24586634 312 VPIYPDDVLIGFLPLAHVFELVAESVCLMTGVPIGYSTPLTLI 354
Cdd:PRK07769 216 LEGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFV 258
|
|
| entF |
PRK10252 |
enterobactin non-ribosomal peptide synthetase EntF; |
271-622 |
9.75e-05 |
|
enterobactin non-ribosomal peptide synthetase EntF;
Pssm-ID: 236668 [Multi-domain] Cd Length: 1296 Bit Score: 45.81 E-value: 9.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 271 VPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLA---HVFE----LVAESvCLMTGV 343
Cdd:PRK10252 593 QLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSfdvSVWEffwpFIAGA-KLVMAE 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 344 PIGYSTPLTLIDTsskIKRgckgdatvLKPTCMTSVPLILdriskgindkvnsgSAFKKSLfkflyqykvkwvqrgykTP 423
Cdd:PRK10252 672 PEAHRDPLAMQQF---FAE--------YGVTTTHFVPSML--------------AAFVASL-----------------TP 709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 424 lidKLVFKKVAKLMggkvRIIMSGGApLSADTHEQIKTCLCLELIQGYGLTEttsgATVmdyrDMTYGRTGGPltvcDIR 503
Cdd:PRK10252 710 ---EGARQSCASLR----QVFCSGEA-LPADLCREWQQLTGAPLHNLYGPTE----AAV----DVSWYPAFGE----ELA 769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 504 LVN----------WEEGNYRVTNKPYPQ-----GEVLIGGECVSQGYYKLPGKTNEDFFEE---DGQRWFKTGDIGEIQA 565
Cdd:PRK10252 770 AVRgssvpigypvWNTGLRILDARMRPVppgvaGDLYLTGIQLAQGYLGRPDLTASRFIADpfaPGERMYRTGDVARWLD 849
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24586634 566 DGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENI----CVY------GDPTKQYtVALVVP 622
Cdd:PRK10252 850 DGAVEYLGRSDDQLKIR-GQRIELGEIDRAMQALPDVEQAvthaCVInqaaatGGDARQL-VGYLVS 914
|
|
| PRK07867 |
PRK07867 |
acyl-CoA synthetase; Validated |
226-328 |
1.07e-04 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 236120 [Multi-domain] Cd Length: 529 Bit Score: 45.44 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 226 CPLVKTiiyieDQLQKTETTGFKEGVKIL-----PFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLLSHKN 300
Cdd:PRK07867 102 CQLVLT-----ESAHAELLDGLDPGVRVInvdspAWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRK 176
|
90 100
....*....|....*....|....*...
gi 24586634 301 CIATMKGFVDMVPIYPDDVLIGFLPLAH 328
Cdd:PRK07867 177 VASAGVMLAQRFGLGPDDVCYVSMPLFH 204
|
|
| MACS_like_1 |
cd05974 |
Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the ... |
440-596 |
1.32e-04 |
|
Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.
Pssm-ID: 341278 [Multi-domain] Cd Length: 432 Bit Score: 44.87 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 440 KVRIIMSGGAPLSADTHEQIKTCLCLELIQGYGLTETTSGATVMDYRDMTYGRTGGPLTvcdirlvnweegNYRVT---- 515
Cdd:cd05974 201 KLREVVGAGEPLNPEVIEQVRRAWGLTIRDGYGQTETTALVGNSPGQPVKAGSMGRPLP------------GYRVAlldp 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 516 -NKPYPQGEV-LIGGEC----VSQGYYKLPGKTNEDFfeEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKlqAGEY-VS 588
Cdd:cd05974 269 dGAPATEGEVaLDLGDTrpvgLMKGYAGDPDKTAHAM--RGG--YYRTGDIAMRDEDGYLTYVGRADDVFK--SSDYrIS 342
|
....*...
gi 24586634 589 LGKVESEL 596
Cdd:cd05974 343 PFELESVL 350
|
|
| MACS_euk |
cd05928 |
Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step ... |
212-596 |
1.43e-04 |
|
Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes. MACS enzymes are localized to mitochondria. Two murine MACS family proteins are found in liver and kidney. In rodents, a MACS member is detected particularly in the olfactory epithelium and is called O-MACS. O-MACS demonstrates substrate preference for the fatty acid lengths of C6-C12.
Pssm-ID: 341251 [Multi-domain] Cd Length: 530 Bit Score: 45.15 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 212 SHDLLPKFKTLLDKCPLVKTIIYIEDQLqktettgfKEGvkILPFNQVVKTGQDskfEH--VPPKGDDIAIIMYTSGSTG 289
Cdd:cd05928 121 SDELAPEVDSVASECPSLKTKLLVSEKS--------RDG--WLNFKELLNEAST---EHhcVETGSQEPMAIYFTSGTTG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 290 TPKgvLLSHKNCIATMKGFVD---MVPIYPDDVL-----IGFLPLA--HVFELVAESVCLMTGVPIGYStPLTLIDTSSK 359
Cdd:cd05928 188 SPK--MAEHSHSSLGLGLKVNgryWLDLTASDIMwntsdTGWIKSAwsSLFEPWIQGACVFVHHLPRFD-PLVILKTLSS 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 360 IkrgckgdatvlkP-TCMTSVPlildriskgindkvnsgSAFKKSLFKFLYQYKVKWVQRGYktplidklvfkkvaklmg 438
Cdd:cd05928 265 Y------------PiTTFCGAP-----------------TVYRMLVQQDLSSYKFPSLQHCV------------------ 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 439 gkvriimSGGAPLSADTHEQIKTCLCLELIQGYGLTETtsGATVMDYRDMTY--GRTGGPLTVCDIRLVNwEEGNYRVTN 516
Cdd:cd05928 298 -------TGGEPLNPEVLEKWKAQTGLDIYEGYGQTET--GLICANFKGMKIkpGSMGKASPPYDVQIID-DNGNVLPPG 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 517 KpypQGEVLIGGE-----CVSQGYYKLPGKTNEDffeEDGQRWFkTGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGK 591
Cdd:cd05928 368 T---EGDIGIRVKpirpfGLFSGYVDNPEKTAAT---IRGDFYL-TGDRGIMDEDGYFWFMGRADDVI-NSSGYRIGPFE 439
|
....*
gi 24586634 592 VESEL 596
Cdd:cd05928 440 VESAL 444
|
|
| ACS-like |
cd17634 |
acetate-CoA ligase; This family includes acyl- and aryl-CoA ligases, as well as the ... |
264-623 |
2.46e-04 |
|
acetate-CoA ligase; This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain.
Pssm-ID: 341289 [Multi-domain] Cd Length: 587 Bit Score: 44.49 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 264 QDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVLlsHKNCIATMKGFVDMVPIY---PDDVLIGFLPLAHVFE--------- 331
Cdd:cd17634 220 ASPEHQPEAMNAEDPLFILYTSGTTGKPKGVL--HTTGGYLVYAATTMKYVFdygPGDIYWCTADVGWVTGhsyllygpl 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 332 LVAESVCLMTGVPIGySTPLTLIDTSSKikrgckgdatvlkptcmtsvplildrisKGINDKVNSGSAFKKslfkfLYQY 411
Cdd:cd17634 298 ACGATTLLYEGVPNW-PTPARMWQVVDK----------------------------HGVNILYTAPTAIRA-----LMAA 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 412 KVKWVQRGYKTPLidklvfkkvaklmggkvRIIMSGGAPLSADTHEQIKTCLCLE---LIQGYGLTEtTSGATVMDYRDM 488
Cdd:cd17634 344 GDDAIEGTDRSSL-----------------RILGSVGEPINPEAYEWYWKKIGKEkcpVVDTWWQTE-TGGFMITPLPGA 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 489 TYGRTGGPL--------TVCDirlvnwEEGNyrvTNKPYPQGEVLIGGecvsqgyyKLPGKT-----NEDFFEEDGQRWF 555
Cdd:cd17634 406 IELKAGSATrpvfgvqpAVVD------NEGH---PQPGGTEGNLVITD--------PWPGQTrtlfgDHERFEQTYFSTF 468
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24586634 556 K----TGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVESELKTCGIIENICVYG--DPTK-QYTVALVVPN 623
Cdd:cd17634 469 KgmyfSGDGARRDEDGYYWITGRSDDVINV-AGHRLGTAEIESVLVAHPKVAEAAVVGipHAIKgQAPYAYVVLN 542
|
|
| PRK07788 |
PRK07788 |
acyl-CoA synthetase; Validated |
256-593 |
2.69e-04 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 236097 [Multi-domain] Cd Length: 549 Bit Score: 44.15 E-value: 2.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 256 FNQVVKTGQDSKFEhVPPKGDDIaIIMyTSGSTGTPKGVLLSHKNCIATMKGFVDMVPIYPDDVLIGFLPLAHVFELVAE 335
Cdd:PRK07788 190 LDDLIAGSSTAPLP-KPPKPGGI-VIL-TSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHL 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 336 SVCLMTGVpigystplTLIdtsskIKRgcKGDA-TVL------KPTCMTSVPLILDRIskgindkvnsgsafkkslfkfl 408
Cdd:PRK07788 267 TLAMALGS--------TVV-----LRR--RFDPeATLediakhKATALVVVPVMLSRI---------------------- 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 409 yqykvkwvqrgyktplIDkLVFKKVAKLMGGKVRIIMSGGAPLSAD----THEQIKTCLCleliQGYGLTEtTSGATVMD 484
Cdd:PRK07788 310 ----------------LD-LGPEVLAKYDTSSLKIIFVSGSALSPElatrALEAFGPVLY----NLYGSTE-VAFATIAT 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 485 YRDM-----TYGRtggPLTVCDIRLVNwEEGNyrvtnkPYPQGEV---LIGGECVSQGYYKLPGKTnedffEEDGqrWFK 556
Cdd:PRK07788 368 PEDLaeapgTVGR---PPKGVTVKILD-ENGN------EVPRGVVgriFVGNGFPFEGYTDGRDKQ-----IIDG--LLS 430
|
330 340 350
....*....|....*....|....*....|....*..
gi 24586634 557 TGDIGEIQADGVLKIIDRKKDLVkLQAGEYVSLGKVE 593
Cdd:PRK07788 431 SGDVGYFDEDGLLFVDGRDDDMI-VSGGENVFPAEVE 466
|
|
| FATP_chFAT1_like |
cd05937 |
Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA ... |
533-703 |
6.66e-04 |
|
Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi; Fatty acid transport protein (FATP) transports long-chain or very-long-chain fatty acids across the plasma membrane. FATPs also have fatty acid CoA synthetase activity, thus playing dual roles as fatty acid transporters and its activation enzymes. FATPs are the key players in the trafficking of exogenous fatty acids into the cell and in intracellular fatty acid homeostasis. Members of this family are fungal FATPs, including FAT1 from Cochliobolus heterostrophus.
Pssm-ID: 341260 [Multi-domain] Cd Length: 468 Bit Score: 42.80 E-value: 6.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 533 QGYYKLPGKTN----EDFFEEdGQRWFKTGDIGEIQADGVLKIIDRKKDLVKLQaGEYVSLGKVESELKTCGIIENICVY 608
Cdd:cd05937 315 QGYLHNEDATEsklvRDVFRK-GDIYFRTGDLLRQDADGRWYFLDRLGDTFRWK-SENVSTTEVADVLGAHPDIAEANVY 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 609 GdptkqytvaLVVPNQN--------HLEElaqkhglgdksfeelcSSPIIEKAILKEIAEHARKcKLQKYEVPAAITLCK 680
Cdd:cd05937 393 G---------VKVPGHDgragcaaiTLEE----------------SSAVPTEFTKSLLASLARK-NLPSYAVPLFLRLTE 446
|
170 180
....*....|....*....|...
gi 24586634 681 EVWSpdmglvTAAFKLKRKDIQD 703
Cdd:cd05937 447 EVAT------TDNHKQQKGVLRD 463
|
|
| Ac_CoA_lig_AcsA |
TIGR02188 |
acetate--CoA ligase; This model describes acetate-CoA ligase (EC 6.2.1.1), also called ... |
223-319 |
7.03e-04 |
|
acetate--CoA ligase; This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by pfam00501.
Pssm-ID: 274022 [Multi-domain] Cd Length: 626 Bit Score: 43.00 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 223 LDKCPL-VKTIIYiedqLQKT--ETTGFKEGvKILPFNQVVKtGQDSKFEHVPPKGDDIAIIMYTSGSTGTPKGVL---- 295
Cdd:TIGR02188 187 LEKCPVsVEHVLV----VRRTgnPVVPWVEG-RDVWWHDLMA-KASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLhttg 260
|
90 100
....*....|....*....|....*.
gi 24586634 296 --LSHknCIATMKGFVDmvpIYPDDV 319
Cdd:TIGR02188 261 gyLLY--AAMTMKYVFD---IKDGDI 281
|
|
| PRK06164 |
PRK06164 |
acyl-CoA synthetase; Validated |
521-622 |
9.35e-04 |
|
acyl-CoA synthetase; Validated
Pssm-ID: 235722 [Multi-domain] Cd Length: 540 Bit Score: 42.42 E-value: 9.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 521 QGEVLIGGECVSQGYYKLPGKTnEDFFEEDGqrWFKTGDIGEIQADGVLKIIDRKKDLVKLqAGEYVSLGKVESELKTCG 600
Cdd:PRK06164 377 SGEIEIRAPSLMRGYLDNPDAT-ARALTDDG--YFRTGDLGYTRGDGQFVYQTRMGDSLRL-GGFLVNPAEIEHALEALP 452
|
90 100
....*....|....*....|....
gi 24586634 601 IIENICVYGDPTKQYT--VALVVP 622
Cdd:PRK06164 453 GVAAAQVVGATRDGKTvpVAFVIP 476
|
|
| hsFATP2a_ACSVL_like |
cd05938 |
Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar ... |
270-329 |
1.38e-03 |
|
Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins; Fatty acid transport proteins (FATP) of this family transport long-chain or very-long-chain fatty acids across the plasma membrane. At least five copies of FATPs are identified in mammalian cells. This family includes hsFATP2, hsFATP5, and hsFATP6, and similar proteins. Each FATP has unique patterns of tissue distribution. These FATPs also have fatty acid CoA synthetase activity, thus playing dual roles as fatty acid transporters and its activation enzymes. The hsFATP proteins exist in two splice variants; the b variant, lacking exon 3, has no acyl-CoA synthetase activity. FATPs are key players in the trafficking of exogenous fatty acids into the cell and in intracellular fatty acid homeostasis.
Pssm-ID: 341261 [Multi-domain] Cd Length: 537 Bit Score: 41.89 E-value: 1.38e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 270 HVPPKGDDIAIIMYTSGSTGTPKGVLLSHKNCIAtMKGFVDMVPIYPDDVLIGFLPLAHV 329
Cdd:cd05938 138 RAHVTIKSPALYIYTSGTTGLPKAARISHLRVLQ-CSGFLSLCGVTADDVIYITLPLYHS 196
|
|
| PRK03584 |
PRK03584 |
acetoacetate--CoA ligase; |
213-298 |
1.47e-03 |
|
acetoacetate--CoA ligase;
Pssm-ID: 235134 [Multi-domain] Cd Length: 655 Bit Score: 41.70 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 213 HDLLPKFKTLLDKCPLVKTIIYIeDQLQKTETtgFKEGVKILPFNQVVKTGQDSKFEHVPPKGDDIAIIMYTSGSTGTPK 292
Cdd:PRK03584 203 FDRRAKVAELRAALPSLEHVVVV-PYLGPAAA--AAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPK 279
|
90
....*....|...
gi 24586634 293 -------GVLLSH 298
Cdd:PRK03584 280 civhghgGILLEH 292
|
|
| PRK00174 |
PRK00174 |
acetyl-CoA synthetase; Provisional |
281-295 |
4.02e-03 |
|
acetyl-CoA synthetase; Provisional
Pssm-ID: 234677 [Multi-domain] Cd Length: 637 Bit Score: 40.51 E-value: 4.02e-03
|
| AACS |
cd05943 |
Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS); AACS is a cytosolic ligase that ... |
213-299 |
5.32e-03 |
|
Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS); AACS is a cytosolic ligase that specifically activates acetoacetate to its coenzyme A ester by a two-step reaction. Acetoacetate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is the first step of the mevalonate pathway of isoprenoid biosynthesis via isopentenyl diphosphate. Isoprenoids are a large class of compounds found in all living organisms. AACS is widely distributed in bacteria, archaea and eukaryotes. In bacteria, AACS is known to exhibit an important role in the metabolism of poly-b-hydroxybutyrate, an intracellular reserve of organic carbon and chemical energy by some microorganisms. In mammals, AACS influences the rate of ketone body utilization for the formation of physiologically important fatty acids and cholesterol.
Pssm-ID: 341265 [Multi-domain] Cd Length: 629 Bit Score: 39.95 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24586634 213 HDLLPKFKTLLDKCPLVKTIIYIEDqLQKTETTGFKEGVKILPFNQVVKTGQDSK--FEHVPPkgDDIAIIMYTSGSTGT 290
Cdd:cd05943 187 HDVREKVAELVKGLPSLLAVVVVPY-TVAAGQPDLSKIAKALTLEDFLATGAAGEleFEPLPF--DHPLYILYSSGTTGL 263
|
90
....*....|....*.
gi 24586634 291 PK-------GVLLSHK 299
Cdd:cd05943 264 PKcivhgagGTLLQHL 279
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