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Conserved domains on  [gi|23510406|ref|NP_694537|]
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POM121 and ZP3 fusion protein isoform 2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
POM121 super family cl21092
POM121 family;
56-96 2.94e-05

POM121 family;


The actual alignment was detected with superfamily member pfam15229:

Pssm-ID: 464572 [Multi-domain]  Cd Length: 226  Bit Score: 41.19  E-value: 2.94e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 23510406    56 KKRTVEEED-QIFLDGQENKRSClVDGLTDASSAFK-----------VPRPGP 96
Cdd:pfam15229   4 RKRTVKDEDgQSVTEGQDSKRRR-PDSSGSAQSAFRpllangvpssfVPKPGP 55
 
Name Accession Description Interval E-value
POM121 pfam15229
POM121 family;
56-96 2.94e-05

POM121 family;


Pssm-ID: 464572 [Multi-domain]  Cd Length: 226  Bit Score: 41.19  E-value: 2.94e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 23510406    56 KKRTVEEED-QIFLDGQENKRSClVDGLTDASSAFK-----------VPRPGP 96
Cdd:pfam15229   4 RKRTVKDEDgQSVTEGQDSKRRR-PDSSGSAQSAFRpllangvpssfVPKPGP 55
 
Name Accession Description Interval E-value
POM121 pfam15229
POM121 family;
56-96 2.94e-05

POM121 family;


Pssm-ID: 464572 [Multi-domain]  Cd Length: 226  Bit Score: 41.19  E-value: 2.94e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 23510406    56 KKRTVEEED-QIFLDGQENKRSClVDGLTDASSAFK-----------VPRPGP 96
Cdd:pfam15229   4 RKRTVKDEDgQSVTEGQDSKRRR-PDSSGSAQSAFRpllangvpssfVPKPGP 55
Zona_pellucida pfam00100
Zona pellucida-like domain;
65-115 1.20e-03

Zona pellucida-like domain;


Pssm-ID: 459673 [Multi-domain]  Cd Length: 254  Bit Score: 36.82  E-value: 1.20e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 23510406    65 QIFLDGqenkrsCLVDGltDASSAFKVPRPGPDT-LQFTVDVFHFANDSRNM 115
Cdd:pfam00100 189 QLIVNG------CPNDG--DSTYPVSSLSNGPSHyVRFSFKAFRFVGSSISQ 232
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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