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Conserved domains on  [gi|22748699|ref|NP_689532|]
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uncharacterized protein C12orf54 [Homo sapiens]

Protein Classification

DUF4681 domain-containing protein( domain architecture ID 11238982)

DUF4681 domain-containing protein similar to Homo sapiens protein C12orf54

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4681 pfam15732
Domain of unknown function (DUF4681); This family of proteins is found in eukaryotes. Proteins ...
 1-127 1.35e-73

Domain of unknown function (DUF4681); This family of proteins is found in eukaryotes. Proteins in this family are typically between 101 and 127 amino acids in length.


:

Pssm-ID: 464829  Cd Length: 125  Bit Score: 214.92  E-value: 1.35e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22748699     1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIRGMSncSMTPMTSAPRT 80
Cdd:pfam15732   1 MAQHAFQDQEQKEEMTSRQQRSTSIEETMKPQEKQVTITETLWDQVLTAFKDIQNELQEDARIRGMS--SVTPMSSAPRT 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 22748699    81 GSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQSAYYPGP 127
Cdd:pfam15732  79 GSIKPPDAGMTPKLRRLQFSTGEQPSGARAHNLRTQLSGQSACYPGP 125
 
Name Accession Description Interval E-value
DUF4681 pfam15732
Domain of unknown function (DUF4681); This family of proteins is found in eukaryotes. Proteins ...
 1-127 1.35e-73

Domain of unknown function (DUF4681); This family of proteins is found in eukaryotes. Proteins in this family are typically between 101 and 127 amino acids in length.


Pssm-ID: 464829  Cd Length: 125  Bit Score: 214.92  E-value: 1.35e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22748699     1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIRGMSncSMTPMTSAPRT 80
Cdd:pfam15732   1 MAQHAFQDQEQKEEMTSRQQRSTSIEETMKPQEKQVTITETLWDQVLTAFKDIQNELQEDARIRGMS--SVTPMSSAPRT 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 22748699    81 GSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQSAYYPGP 127
Cdd:pfam15732  79 GSIKPPDAGMTPKLRRLQFSTGEQPSGARAHNLRTQLSGQSACYPGP 125
 
Name Accession Description Interval E-value
DUF4681 pfam15732
Domain of unknown function (DUF4681); This family of proteins is found in eukaryotes. Proteins ...
 1-127 1.35e-73

Domain of unknown function (DUF4681); This family of proteins is found in eukaryotes. Proteins in this family are typically between 101 and 127 amino acids in length.


Pssm-ID: 464829  Cd Length: 125  Bit Score: 214.92  E-value: 1.35e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22748699     1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIRGMSncSMTPMTSAPRT 80
Cdd:pfam15732   1 MAQHAFQDQEQKEEMTSRQQRSTSIEETMKPQEKQVTITETLWDQVLTAFKDIQNELQEDARIRGMS--SVTPMSSAPRT 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 22748699    81 GSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQSAYYPGP 127
Cdd:pfam15732  79 GSIKPPDAGMTPKLRRLQFSTGEQPSGARAHNLRTQLSGQSACYPGP 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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