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Conserved domains on  [gi|112983592|ref|NP_667103|]
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olfactory receptor 1223 [Mus musculus]

Protein Classification

olfactory receptor family 4A protein( domain architecture ID 11610412)

olfactory receptor family 4A protein is an odorant receptor belonging to the G-protein coupled receptor 1 family

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 9.03e-147

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 413.15  E-value: 9.03e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQTL-GSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 112983592 263 AFSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 9.03e-147

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 413.15  E-value: 9.03e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQTL-GSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 112983592 263 AFSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 2.08e-40

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 142.26  E-value: 2.08e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592   29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLH-QPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  189 TNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILI-----YARNTS 262
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLsmvhrFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 112983592  263 AFSFEKNVFIFAdVLTPLLNPMVYTFRNKEMKNAIKKI 300
Cdd:pfam13853 240 PLLQIMMANAYL-FFPPVLNPIVYSVKTKQIRDCVKRM 276
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 9.03e-147

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 413.15  E-value: 9.03e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQTL-GSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 112983592 263 AFSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
25-290 4.49e-123

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 353.05  E-value: 4.49e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15226    3 LFVFFSLFYVATVLGNLLIVVTVTSDPHLH-SPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15226   82 FFGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSAF 264
Cdd:cd15226  162 KLACTDTYVLELMVVANSGLISLVCFLLLLISYIVILVTVRKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTF 241
                        250       260
                 ....*....|....*....|....*.
gi 112983592 265 SFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15226  242 PVDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
24-290 1.13e-108

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 316.73  E-value: 1.13e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd13954    2 LLFVLFLLIYLLTLLGNLLIILLVRLDSRLH-TPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd13954   81 FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd13954  161 LKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTiLKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 263 AFSFEKNVF--IFADVLTPLLNPMVYTFRN 290
Cdd:cd13954  241 SYSSDLDKVvsVFYTVVTPMLNPIIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
24-297 4.82e-108

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 315.55  E-value: 4.82e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15225    2 LLFVVFLLIYLVTLLGNLLIILITKVDPALH-TPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15225   81 LFLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15225  161 LKLACADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTiLKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 112983592 263 AFSFEKNVFI--FADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15225  241 SYSPETDKLLslFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
25-290 7.07e-108

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 314.66  E-value: 7.07e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15936    3 LFLVFLLVYLTTWLGNLLIIITVISDPHLH-TPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15936   82 FTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSAF 264
Cdd:cd15936  162 KLACTDTFLLELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTF 241
                        250       260
                 ....*....|....*....|....*.
gi 112983592 265 SFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15936  242 PMDKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
24-290 1.00e-105

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 309.05  E-value: 1.00e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15230    2 PLFVLFLLIYLITLVGNLGMIVLIRIDSRLH-TPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15230   81 AVFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15230  161 LKLSCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITiLRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 263 AFSFEKN--VFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15230  241 SYSLDQDkvVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
24-290 5.34e-101

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 297.05  E-value: 5.34e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15940    2 AFFMLFLVLYLLTLSGNILIMITIVMDPRLH-TPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15940   81 HLFACTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15940  161 IKLACTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVSLRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTS 240
                        250       260
                 ....*....|....*....|....*..
gi 112983592 264 FSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15940  241 FSEDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
9-300 1.55e-99

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 294.66  E-value: 1.55e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592   9 EFILLGLSQNPKVEKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYET 88
Cdd:cd15943    1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLH-TPMYFFLSHLSFLDLCYSSAITPKMLVNFLAEN 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  89 KTISFECCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFC 168
Cdd:cd15943   80 KTISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 169 GPNVIEHFICDLFPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVL 247
Cdd:cd15943  160 GSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAiLRIHSSEGRRKAFSTCASHLMAVT 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 112983592 248 LFFVPCILIYARNTSAFSFEKN--VFIFADVLTPLLNPMVYTFRNKEMKNAIKKI 300
Cdd:cd15943  240 IFYGTTLFMYLRPSSSYSLDQDkvVSVFYTVVIPMLNPLIYSLRNKEVKDALRRI 294
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
25-297 4.19e-97

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 287.57  E-value: 4.19e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15229    3 LFLVFLVIYLLTLLGNLLIMLVIRADSHL-HTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15229   82 FFAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15229  162 PLSCSDTFANKMVLLTSSVIFGLGSFLLTLVSYIHIISTiLRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSA 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 112983592 264 --FSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15229  242 ssSVLDRVFSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
10-294 1.06e-96

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 286.91  E-value: 1.06e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  10 FILLGLSQNPKVEKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETK 89
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLH-TPMYFFLSHLSFLDICYSSTITPKTLLNLLAERK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  90 TISFECCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCG 169
Cdd:cd15408   80 VISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 170 PNVIEHFICDLFPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLL 248
Cdd:cd15408  160 SNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATiLRMRSAEGRHKAFSTCASHLTAVTL 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 112983592 249 FFVPCILIYARNTSAFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMK 294
Cdd:cd15408  240 FYGSLAFMYLRPSSRYSLDldKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
24-290 1.32e-95

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 283.58  E-value: 1.32e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15935    2 LLFVLVLACYAAILLGNLLIVVTVHADPHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15935   82 HFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15935  162 IKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSS 241
                        250       260
                 ....*....|....*....|....*..
gi 112983592 264 FSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15935  242 SSVDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
25-297 1.71e-95

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 283.39  E-value: 1.71e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15231    3 LFLIFLIIYLVTLLGNLLIITLVLLDSHLH-TPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15231   82 SFVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15231  162 KLSCSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTiLKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSG 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 112983592 264 FSFEKNVFI--FADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15231  242 YSLDKDTLIsvLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
24-290 2.32e-94

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 280.52  E-value: 2.32e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFaV 103
Cdd:cd15912    2 LLFLLLLLTYLLTLLGNLLIITITLVDHRLH-TPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSF-F 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTG-VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15912   80 YFFLGtTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFAnsGSICIIIFSLLL--VSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYAR 259
Cdd:cd15912  160 LLKLSCSDTRLIELLDFI--LASVVLLGSLLLtiVSYIYIISTiLRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVR 237
                        250       260       270
                 ....*....|....*....|....*....|...
gi 112983592 260 --NTSAFSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15912  238 psQSSSLDLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
25-290 2.43e-94

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 280.22  E-value: 2.43e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15938    3 LFALFLLAYTMVLVGNLLIMVTVRSDPKL-SSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15938   82 FVGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRshSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSAF 264
Cdd:cd15938  162 KLACTDTCVTELLMVSNSGLISTVCFVVLVTSYTTILVTIR--STEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTF 239
                        250       260
                 ....*....|....*....|....*.
gi 112983592 265 SFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15938  240 PVDKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
22-297 5.77e-94

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 279.49  E-value: 5.77e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  22 EKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLF 101
Cdd:cd15235    1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLH-TPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 102 AVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLF 181
Cdd:cd15235   80 FFIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQ 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 182 PLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARN 260
Cdd:cd15235  160 PLLKLSCSDTSLNELLIFTEGAVVVLGPFLLIVLSYARILAAvLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQP 239
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 261 TSAFSFEKNVF--IFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15235  240 SSSYSADKDRVatVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
24-290 6.05e-94

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 279.31  E-value: 6.05e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15937    2 LLFVLFLLFYLIILPGNILIILTIQGDPQL-GSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15937   81 HFLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15937  161 IKLACTNTYTVELLMFSNSGLVILLCFLLLLISYAFLLAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRS 240
                        250       260
                 ....*....|....*....|....*..
gi 112983592 264 FSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15937  241 FPMDKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
24-299 1.01e-92

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 276.45  E-value: 1.01e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15417    2 ILFVLFLGIYLVTLLWNLGLIILIRMDSHLH-TPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15417   81 SGMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15417  161 LSLSCSDTFISQVVLFLVAVLFGVFSVLVVLISYGYIISTiLKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 263 AFS--FEKNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15417  241 SHSqdQDKVASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
10-300 1.23e-92

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 276.85  E-value: 1.23e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  10 FILLGLSQNPKVEKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETK 89
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLH-TPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  90 TISFECCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCG 169
Cdd:cd15410   80 AISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 170 PNVIEHFICDLFPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLL 248
Cdd:cd15410  160 SNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTiLRIRSAEGRQKAFSTCASHLTAITI 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 112983592 249 FFVPCILIYARNTSAFSF--EKNVFIFADVLTPLLNPMVYTFRNKEMKNAIKKI 300
Cdd:cd15410  240 FHGTILFMYCRPSSSYSLdtDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKL 293
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
24-290 4.02e-92

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 274.75  E-value: 4.02e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15911    2 LLFLLFLVIYIVTMAGNILIIVLVVADRHLH-TPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15911   81 GSLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFAnSGSICIII-FSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYA--R 259
Cdd:cd15911  161 LKLSCSDTSLVELVTFI-LSSIVTLPpFLLTLTSYICIISTiLRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVvpS 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 260 NTSAFSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15911  240 TNTSRDLNKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
23-290 2.85e-91

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 272.61  E-value: 2.85e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15237    1 ILLFILFLLIYLLTLLGNGLIILLIWLDSRLH-TPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15237   80 FLALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15237  160 VLKLACADTSLNEAVIFVTSVLVLLIPFSLILASYIRILATiLRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPH 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 262 SAFS--FEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15237  240 STHSpdQDKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
24-296 4.79e-90

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 269.81  E-value: 4.79e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15421    2 FLFSLILLIFLVALTGNALLILLIWLDSRLH-TPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15421   81 LTLGGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15421  161 LKLSCADTSAYETVVYVSGVLFLLIPFSLILASYALILLTvLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGS 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 112983592 263 AFSFEKN--VFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15421  241 YHSPEQDkvVSVFYTILTPMLNPLIYSLRNKEVLGA 276
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
24-299 7.26e-90

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 269.24  E-value: 7.26e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15416    2 ILFVLFLVIYSVTLLGNLSIILLIRISSQLH-TPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15416   81 ATFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15416  161 LKLSCSDIRLAKILPSISSGIIILVTVLTIIISYLYILIAiLRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 263 AFSFEKN--VFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15416  241 SYSMDQNkvVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
24-299 9.99e-90

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 268.89  E-value: 9.99e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15409    2 PLFLVFLAIYLITLVGNLGLIALIWKDSHLH-TPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15409   81 GFSATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15409  161 LKISCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTiLKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 263 AFSFEKNVF--IFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15409  241 LYALDQDMMdsLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
24-290 1.62e-89

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 268.02  E-value: 1.62e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15915    2 FLFVLFLLLYLASLLGNGAILAVVIAEPRLH-SPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15915   81 HFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSL--RSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15915  161 LKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLllKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPS 240
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 262 SAFSFEKN--VFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15915  241 SGDSLEQDriVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
26-290 1.74e-88

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 265.47  E-value: 1.74e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  26 FVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHF 105
Cdd:cd15227    4 FVLFLLIYLAALTGNLLIITVVTLDHHLH-TPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 106 FTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLK 185
Cdd:cd15227   83 FAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 186 LACTNTHIFVILVFANSGSICIIIFSLLLVSYGVIlFS--LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15227  163 LSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHI-FStvLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSD 241
                        250       260
                 ....*....|....*....|....*....
gi 112983592 264 FSFEKNVF--IFADVLTPLLNPMVYTFRN 290
Cdd:cd15227  242 SPSLLDLLlsVFYSVVPPTLNPIIYSLRN 270
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
25-297 1.86e-88

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 265.47  E-value: 1.86e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFF-YETKTISFECCMVQLFAV 103
Cdd:cd15916    3 LFLIFLIIYLLTVLGNLLILLTVWVDSHLH-RPMYIFLGHLSFLDMWLSTVTVPKMLAGFLePGGKVISFGGCVAQLYFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15916   82 HFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15916  162 LKLACADTTINELVIFASIGVVALGCFILILLSYGNIVRAiLRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGS 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 112983592 263 AFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15916  242 KEALDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
23-290 3.41e-88

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 264.86  E-value: 3.41e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15918    1 QLLFGLFLGMYLVTVLGNLLIILAIGSDSHLH-TPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15918   80 FLLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15918  160 LLKLSCSDTHLNELVILVLGGLVGLVPFLCILVSYVRIVSAvLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPP 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 262 SAFSFEKNVF--IFADVLTPLLNPMVYTFRN 290
Cdd:cd15918  240 SSHSASKDSVaaVMYTVVTPMLNPFIYSLRN 270
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
24-299 3.50e-88

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 264.95  E-value: 3.50e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15411    2 PLFVLFLVIYVITVMGNLGMILLIRADSQLH-TPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15411   81 IALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15411  161 LKLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTiLKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 263 AFSFEKNVF--IFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15411  241 SYSLGQDKVasVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
24-299 1.37e-87

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 263.40  E-value: 1.37e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15419    2 LLFLLFLVIYMVTVLGNIGMIIIISTDSRL-HTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15419   81 SLFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15419  161 LKLSCSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTiLRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGA 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 263 AFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15419  241 VSSPEqsKVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
24-290 2.82e-87

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 262.19  E-value: 2.82e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15232    2 LLFWLFLFLYAAALTGNSLIILAISTSPKLH-TPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15232   81 TWSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15232  161 LLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSiLRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 263 AFSFE--KNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15232  241 SYSPEkdKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
25-296 4.70e-87

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 261.95  E-value: 4.70e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15429    3 LFVLFLVMYLLTLLGNFLIILLIRLDPRL-HTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15429   82 ALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15429  162 RLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAiLRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSG 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 112983592 264 FS--FEKNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15429  242 SSalQEKMISLFYAVVTPMLNPLIYSLRNKEVKGA 276
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
24-297 6.34e-86

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 259.29  E-value: 6.34e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15228    2 ILFVLFLAFYLCTLLGNLLILSAILSDPRLH-TPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15228   81 HFLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15228  161 LKLACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISiLKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTP 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 112983592 263 AFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15228  241 SPVLVTPVQIFNNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
24-299 2.16e-85

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 258.02  E-value: 2.16e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15413    2 PLFGLFLVIYLTTVMGNLGMIILTRLDSRL-QTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15413   81 LTFIISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15413  161 LALSCSDTHEKELIILIFAGFNLISSLLIVLVSYLFILSAiLRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 263 AFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15413  241 SHSLDtdKMASVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
25-299 4.34e-85

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 256.96  E-value: 4.34e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15415    3 LFMLFLLIYFITLLGNLGMIVLIRINPQLH-TPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15415   82 VFVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15415  162 KLSCSDTHINELLLLTFSGVIAMSTLLTIIISYIFILFAiLRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQ 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 264 FSF--EKNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15415  242 YSLeqEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
24-290 6.11e-85

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 256.38  E-value: 6.11e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15431    2 ILFVLLLIVYLVTLLGNGLIILLIRVDSQLH-TPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQiIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15431   81 LFLGITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIP-VLTMPLHFCGPNVINHFFCEVQAL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15431  160 LKLACSDTSLNEILMFATSIFTLLLPFSFILVSYIRIGVAvLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQS 239
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 263 AFSFEKN--VFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15431  240 KSSSDQDkiISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
14-300 1.57e-84

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 256.14  E-value: 1.57e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  14 GLSQNPKVEKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISF 93
Cdd:cd15406    1 GLTDQPELQLPLFLLFLGIYVVTVVGNLGMILLITLSSQLH-TPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  94 ECCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVI 173
Cdd:cd15406   80 PECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 174 EHFICDLFPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVP 252
Cdd:cd15406  160 NHYFCDILPLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYAFILSSiLRIRSAEGRSKAFSTCSSHLAAVGVFYGS 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 112983592 253 CILIYARNTSAFSF--EKNVFIFADVLTPLLNPMVYTFRNKEMKNAIKKI 300
Cdd:cd15406  240 IIFMYLKPSSSSSMtqEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
10-299 4.26e-84

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 255.05  E-value: 4.26e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  10 FILLGLSQNPKVEKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETK 89
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLH-TPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  90 TISFECCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCG 169
Cdd:cd15945   80 SIPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 170 PNVIEHFICDLFPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLL 248
Cdd:cd15945  160 SNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITvLKIRSAEGRFKAFSTCASHLTAVGL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 112983592 249 FFVPCILIYARNTSAFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15945  240 FYGTLLFMYLRPSSSYSLDtdKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
25-296 6.63e-84

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 254.17  E-value: 6.63e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15420    3 LFGLFSLLYIFTLLGNGLILGLIWLDSRLH-TPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15420   82 ALAHTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15420  162 KLACADTWINEILIFAGCVFILLGPFSLILISYLHILAAiLKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 112983592 264 FSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15420  242 NSAEqeKILSLFYSLFNPMLNPLIYSLRNKQVKGA 276
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
23-290 6.09e-83

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 251.39  E-value: 6.09e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15947    1 MPLFVVVLIFYLLTLLGNTAIILLSLLDPRLH-TPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15947   80 FLWLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15947  160 LIKLACVDTTFNELELFVASVFFLLVPLSLILVSYGFIARAvLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPP 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 262 SAFSFEKNVFI--FADVLTPLLNPMVYTFRN 290
Cdd:cd15947  240 SSYSQDQGKFIslFYTVVTPTLNPLIYTLRN 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
23-299 2.46e-81

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 247.70  E-value: 2.46e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15412    1 PLLFVLFLVIYLITLLGNLGMILLIRLDSRLH-TPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15412   80 FIALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15412  160 LIKLSCSDTYVKETAMFIVAGFNLSSSLLIILISYLFILIAiLRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPP 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 112983592 262 SAFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15412  240 SEESVEqsKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
24-303 3.37e-81

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 247.34  E-value: 3.37e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15414    2 PLFLLFLLVYLITLLGNLGMIILIQVDSRLH-TPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15414   81 GLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15414  161 LSLSCADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAiLRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSS 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 112983592 263 AFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAIKKIWRR 303
Cdd:cd15414  241 SSSLDldKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTIRR 283
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
25-290 9.68e-80

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 243.34  E-value: 9.68e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15224    3 LFLLFLIAYVLTLLENLLIILTIWLNSQLH-KPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15224   82 SLACTECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15224  162 NLSCTDMSLAELVDFILALIILLVPLLVTVASYICIISTvLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKAI 241
                        250       260
                 ....*....|....*....|....*....
gi 112983592 264 FSFEKN--VFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15224  242 SSFDSNklVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
24-297 4.49e-79

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 241.56  E-value: 4.49e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15424    2 LLFVVILIIYLLTILGNLVIIILVQTDSRLH-TPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15424   81 LSLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIY--ARN 260
Cdd:cd15424  161 LKLACADTHITEAIVFGAGVLILLVPLSVILTSYGLILASvLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYmrPRS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 112983592 261 TSAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15424  241 GSTPDRDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
24-297 1.14e-78

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 240.91  E-value: 1.14e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDACISSVITPKMIVDFFYET-KTISFECCMVQLFA 102
Cdd:cd15941    2 LFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGLPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSgRTISFEGCVVQLYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15941   82 FHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15941  162 VLKLACADTTINELVILANIGIVAAGCFLLIVISYIYIVAAvLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPS 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 112983592 262 SAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15941  242 SSQAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
23-297 1.36e-77

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 238.05  E-value: 1.36e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15434    1 KILSVVVLIFYLLTLVGNTTIILVSCLDSRLH-TPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15434   80 ALGLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15434  160 LIKLACVDTTAYEATIFALGVFILLFPLSLILVSYGYIARAvLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPK 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 262 SAFSFEKNVF--IFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15434  240 NSVSQDQGKFltLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
10-300 2.60e-77

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 237.76  E-value: 2.60e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  10 FILLGLSQNPKVEKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETK 89
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLH-TPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  90 TISFECCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCG 169
Cdd:cd15944   80 VISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 170 PNVIEHFICDLFPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLL 248
Cdd:cd15944  160 SNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAiLRMRSAEGRRKAFSTCASHFTGVTL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 112983592 249 FFVPCILIYARNTSAFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAIKKI 300
Cdd:cd15944  240 FYGTVIFMYLRPTSVYSLDqdKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKL 293
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
24-297 4.15e-76

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 234.01  E-value: 4.15e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15234    2 LLFGLFLSMYLVTVLGNLLIILAVSSDSHLH-TPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15234   81 LLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15234  161 LKLACSDTLINNILIYLATVIFGGIPLSGIIFSYYKIVSSiLRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISSAV 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 112983592 263 AFSFEKNVF--IFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15234  241 THSSRKTAVasVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
25-297 1.16e-75

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 233.09  E-value: 1.16e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15942    3 LFLFFLVVYLLTLSGNSLIILVVISDLQLH-KPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15942   82 FLGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAML 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15942  162 KLACADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAiLKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQ 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 112983592 264 FSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15942  242 DPLDGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
24-290 8.21e-74

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 228.02  E-value: 8.21e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15914    2 LLFILLLLIYLFIITGNLLIFTVVRLDTHLH-TPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15914   81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSY-GVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15914  161 LSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYvKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSK 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 263 AFS--FEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15914  241 SYSldYDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
23-290 2.40e-73

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 226.87  E-value: 2.40e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15430    1 ILLFVLCLIMYLVILLGNGVLIIITILDSHLH-TPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15430   80 SLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15430  160 VLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYIFILSTiLRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPK 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 262 S--AFSFEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15430  240 SknAQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
24-297 8.53e-73

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 225.83  E-value: 8.53e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15233    2 VLFVTFLLAYIVTIGGNLSILAAILLEPKLH-TPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15233   81 HLLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYG-VILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15233  161 FQLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYAhVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 112983592 263 AFSFEKN--VFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15233  241 VYSSDKDkvIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
23-297 1.09e-72

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 225.44  E-value: 1.09e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15432    1 MVLFVVFLIFYILTLLGNLAIILVSRLDPQLH-TPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15432   80 FLGLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15432  160 LLKLSCVDTTANEAELFVISVLLLLIPLGLILISYIFIVRAvLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPP 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 262 SAFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15432  240 SNSSHDrgKMVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
24-299 2.03e-72

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 225.05  E-value: 2.03e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15418    3 ILFVVFLLSYILTLVGNLTLIALICLDSRLH-TPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15418   82 AGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15418  162 VKLACDDTRVYELILYFILGFNVIAPTALILASYTFILAAiLRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 263 AFSFEKN--VFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15418  242 SHTPDRDkvVALFYTVVNPLLNPLIYSLRNKDVKEALKK 280
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
25-297 4.75e-72

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 223.83  E-value: 4.75e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15405    3 LFFLFLGIYVVTVVGNLGLITLICLNSHLH-TPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFC 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15405   82 FFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15405  162 QLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNiLHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSV 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 112983592 264 FSFEKNVF--IFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15405  242 GSVNQGKVssVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
24-290 5.77e-71

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 220.65  E-value: 5.77e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15913    2 LLFSFFSVIYILTLLGNGAIICAVWWDRRL-HTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15913   81 FSLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYG-VILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15913  161 LALSCVPAPGTELICYTLSSLIIFGTFLFILGSYTlVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 263 AFS--FEKNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15913  241 GNStgMQKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
25-297 3.23e-69

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 216.58  E-value: 3.23e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15428    3 LFILFLIIYLMTVLGNLLLVLLVIVDSHLH-TPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15428   82 SFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15428  162 KLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTvFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 112983592 264 FS--FEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15428  242 TSkeYDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
25-299 1.88e-67

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 212.28  E-value: 1.88e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15407    3 LFIIFTLIYLITLVGNLGMILLILLDSRLH-TPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15407   82 VFATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGsiCIIIFSLL--LVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15407  162 ALSCSDIHISEIVLFFLAS--FNVFFALLviLISYLFIFITiLRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPS 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 112983592 262 SAFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15407  240 SSHSMDtdKMASVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
23-297 6.54e-66

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 208.11  E-value: 6.54e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15433    1 PVLFVVVLIFYLLTLVGNTIIILLSVRDLRLH-TPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFP 182
Cdd:cd15433   80 SLALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15433  160 FLKLACGDDETTEVQMFVARVVILLLPAALILGSYGHVAHAvLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPI 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 262 SAFSFEKNVFI--FADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15433  240 HRYSQAHGKFVslFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
24-290 1.95e-65

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 206.56  E-value: 1.95e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15946    2 ILFAVFLLIYLSILLGNGLIITLICLDSRLH-TPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15946   81 LALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15946  161 LKLACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAiLKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 263 AFSFE--KNVFIFADVLTPLLNPMVYTFRN 290
Cdd:cd15946  241 NYSPErdKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
24-297 3.71e-65

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 206.16  E-value: 3.71e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15236    2 VFFALFLAMYLTTVLGNLLIILLIRLDSHLH-TPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPL 183
Cdd:cd15236   81 IFFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTS 262
Cdd:cd15236  161 LKLSCSSTSLNELVIFTEGGLLFVLPLLLILGSYIRIAATiLKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 112983592 263 AFSFEKNVF--IFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15236  241 NNSSDKDIVasVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
25-297 2.45e-61

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 196.36  E-value: 2.45e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15223    3 LSLPFLLLYLVALVANSLLLLIIKLERSLH-QPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLL 184
Cdd:cd15223   82 FFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 KLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFF--VPCILIYARNT 261
Cdd:cd15223  162 SLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAvLRLASGEARSKALNTCGSHLIVILFFYtaVLVSSLTYRFG 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 262 SAFSFEKNVFI--FADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15223  242 KTIPPDVHVLLsvLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
29-293 6.30e-58

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 187.50  E-value: 6.30e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15917    7 FCAMYLVALLGNITILFVIKIESSLH-EPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLKLAC 188
Cdd:cd15917   86 MESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 189 TNTHIFVIlvFANSGSICIIIFSLLLV--SYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSAFS 265
Cdd:cd15917  166 GDTRVNSI--YGLFVALLIVGFDLLFIalSYVLILRAvLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRFGHH 243
                        250       260       270
                 ....*....|....*....|....*....|..
gi 112983592 266 FEKNVFIFAD----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15917  244 VPPHVHILLAnlylLLPPMLNPIVYGVRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
29-293 2.19e-55

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 181.04  E-value: 2.19e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15952    7 FCAVYLIALLGNCTILFVIKTEQSLH-QPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLKLAC 188
Cdd:cd15952   86 MESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 189 TNTHIFVILVFansGSICIIIFSLLLV--SYGVIL---FSLRSHssEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15952  166 ASIRINIIYGL---FAISVLVLDVILIalSYVLILravFRLPSH--DARLKALSTCGSHVCVILAFYTPALFSFLTHRFG 240
                        250       260       270
                 ....*....|....*....|....*....|....
gi 112983592 264 FSFEKNVFI----FADVLTPLLNPMVYTFRNKEM 293
Cdd:cd15952  241 HNIPRYIHIllanLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
27-293 1.03e-53

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 176.84  E-value: 1.03e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd15950    5 IPFCSMYVIALLGNGTILLVIKLDPSLH-EPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLcVILVGIAWAGGFLHSITQIIFTL-QLPFCGPNVIEHFICDLFPLLK 185
Cdd:cd15950   84 TAVESGVLLAMAFDRYVAICHPLRYSAILTSQV-IAQIGLAIVLRALLFMTPLTCLVtSLPYCGSRVVPHSYCEHMAVVK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 186 LACTNTHifVILVFANSGSICIIIFSLLL--VSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCIL-IYarnT 261
Cdd:cd15950  163 LACADPR--PSSLYSITGSTLVVGTDSAFiaVSYGLILRAvLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLsIY---T 237
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 262 SAFSFEKNVFI---FAD---VLTPLLNPMVYTFRNKEM 293
Cdd:cd15950  238 QRFGQGVPPHTqvlLADlylLVPPMLNPIIYGMRTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
25-292 4.71e-51

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 169.60  E-value: 4.71e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFGsPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15222    3 ISIPFCLLYLVALLGNSTILFVIKTEPSLHE-PMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRlCVILVGIAWAGGFLHSITQIIFTLQ-LPFCGPNVIEHFICdLFP- 182
Cdd:cd15222   82 TFSFMESSVLLAMAFDRFVAICNPLRYASILTNS-RIAKIGLAIVLRSVLLLLPLPFLLKrLPFCHSNVLSHSYC-LHQd 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHI------FVILVFANSGSICIiifsllLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCIL 255
Cdd:cd15222  160 VMKLACSDTRVnsiyglFVVLSTMGLDSLLI------LLSYVLILKTvLGIASREERLKALNTCVSHICAVLIFYVPMIG 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 112983592 256 I-----YARNTSAF--SFEKNVFIFadvLTPLLNPMVYTFRNKE 292
Cdd:cd15222  234 LsmvhrFGKHASPLvhVLMANVYLL---VPPVLNPIIYSVKTKQ 274
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
29-292 1.04e-49

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 166.31  E-value: 1.04e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15221    7 FCSMYIVALLGNSLLLFVIVTERSLH-EPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFV 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLhSITQIIFTLQ-LPFCGPNVIEHFICDLFPLLKLA 187
Cdd:cd15221   86 TESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFC-IVFPFVFLLKrLPYCGHNVIPHTYCEHMGIARLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 188 CTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCIliyarntsaFSF 266
Cdd:cd15221  165 CADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAvFRLPSKDARLKALSTCGSHVCVILMFYTPAF---------FSF 235
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 267 EKNVF----------IFAD---VLTPLLNPMVYTFRNKE 292
Cdd:cd15221  236 LTHRFgrhiprhvhiLLANlyvLVPPMLNPIVYGVKTKQ 274
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
29-292 1.22e-44

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 153.27  E-value: 1.22e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFGsPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15951    7 FCIMYAVALLGNFTILFIVKTEPSLHE-PMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFST 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLKLAC 188
Cdd:cd15951   86 MESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 189 TNTHI------FVILVFANSGSICIIifslllVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15951  166 ADTRVsrayglSVAFLVGGLDVIFIA------VSYIQILRAvFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHR 239
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 112983592 262 SAFSFEKNVFIF-ADV---LTPLLNPMVYTFRNKE 292
Cdd:cd15951  240 FGHNVPPHVHILiANVyllVPPMLNPIIYGVRTKQ 274
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
29-292 3.07e-43

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 149.34  E-value: 3.07e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15953    7 FCLMYIVTLLGNCTILFVVGKEQSLH-KPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIM-NQRLCVI-LVGIAWAGGFlhsITQIIFTL-QLPFCGPNVIEHFICDLFPLLK 185
Cdd:cd15953   86 MESAVLVAMAFDRYVAICNPLRYATILtNSRIAKLgLVGLIRGVLL---ILPLPLLLsRLPFCANRIIPHTYCEHMAVVK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 186 LACTNTHIFVI--LVFAnsgsICIIIFSLLLV--SYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPciliyarn 260
Cdd:cd15953  163 LACGDTTINRIygLVVA----LLVVGLDLLLIalSYALIIRAvLRLSSKKARQKALNTCTAHICVILMSYTP-------- 230
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 112983592 261 tSAFSFEKNVF----------IFADV---LTPLLNPMVYTFRNKE 292
Cdd:cd15953  231 -ALFSFLTHRFgqgiaphihiILANLyllVPPMLNPIIYGVKTKE 274
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 2.08e-40

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 142.26  E-value: 2.08e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592   29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLH-QPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  189 TNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILI-----YARNTS 262
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLsmvhrFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 112983592  263 AFSFEKNVFIFAdVLTPLLNPMVYTFRNKEMKNAIKKI 300
Cdd:pfam13853 240 PLLQIMMANAYL-FFPPVLNPIVYSVKTKQIRDCVKRM 276
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
29-294 1.00e-39

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 140.42  E-value: 1.00e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15948    8 FCSAFTVALLGNCTLLYVIKTEPSLH-EPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSI 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLcVILVGIAWAGGFLHSITQIIFTLQ-LPFCGPNVIEHFICDLFPLLKLA 187
Cdd:cd15948   87 MESAVLLAMAFDRYVAICNPLRYATILTNSV-ITKIGLAALARAVTLMTPLPFLLRrLPYCRSHVIAHCYCEHMAVVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 188 CTNT---HIFVILVfansgSICIIIFSLLLV--SYGVILFSLRSHSS-EGRSKALSTCGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15948  166 CGDTrfnNIYGIAV-----ALFIVGLDLMFIilSYVFILRAVLSLASkEEQLKAFGTCGSHICAILVFYTPVVLSSTMHR 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 112983592 262 SAFSFEKNVFI----FADVLTPLLNPMVYTFRNKEMK 294
Cdd:cd15948  241 FARHVAPHVHIllanFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
25-293 2.56e-38

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 136.53  E-value: 2.56e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd15956    3 LSLPFCFIYVLSLLGNGVLLSVVWKEHRLH-QPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRlCVILVGIAWAggfLHSITQIIF----TLQLPFCGPNVIEHFICDL 180
Cdd:cd15956   82 AFSAMESGVLVAMALDRFVAICNPLHYATILTLE-VVAKAGLLLA---LRGVAIVIPfpllVCRLSFCASHTIAHTYCEH 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 181 FPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYAR 259
Cdd:cd15956  158 MAVVKLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTvLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLM 237
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 260 NTSAFSFEKNVFIFAD----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15956  238 HRFGHSVPSAAHVLLSnlylLLPPALNPIVYGIRTKQI 275
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
29-293 2.43e-36

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 131.48  E-value: 2.43e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15954    7 FCFMYIIAMVGNCGLLYLIWIEEALH-RPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLKLAC 188
Cdd:cd15954   86 MESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 189 TNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSS-EGRSKALSTCGSHITVVLLFFVPCIL-IYARNTSAFSF 266
Cdd:cd15954  166 ANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSkEARSKAFSTCTAHICAIVITYTPAFFtFFAHRFGGHHI 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 267 EKNVFIFAD----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15954  246 TPHIHIIMAnlylLLPPMMNPIVYGVKTKQI 276
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
8-294 2.48e-34

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 126.82  E-value: 2.48e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592   8 TEFILLGLSQNPKVEKILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYE 87
Cdd:cd15949    2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLH-QPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  88 TKTISFECCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPF 167
Cdd:cd15949   81 SNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPW 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 168 CGPNVIEHFICDLFPLLKLACTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSL-RSHSSEGRSKALSTCGSHITVV 246
Cdd:cd15949  161 YRTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVqRLATSEARLKTFGTCVSHVCAI 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 112983592 247 LLFFVPCILIYARNTSAFSFEKNVFI----FADVLTPLLNPMVYTFRNKEMK 294
Cdd:cd15949  241 LAFYVPIAVSSLIHRFGQNVPPPTHIllanFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
29-293 5.30e-32

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 119.87  E-value: 5.30e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  29 FFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTG 108
Cdd:cd15955    7 FCIMFLLAVLGNCTLLIVIKRERSLH-QPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 109 VEVIVLSAMAYDRYVAICKPLHYSSIMNQR-LCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFPLLKLA 187
Cdd:cd15955   86 FESGILLAMALDRYVAICHPLRHSSILTPQvLLGIGVLVVVRAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 188 CTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSL-RSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSAFSF 266
Cdd:cd15955  166 ADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVfRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRFGHHV 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 112983592 267 EKNVFIFAD----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15955  246 APYVHILLSnlylLVPPVLNPIVYGVKTKQI 276
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
39-286 5.87e-27

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 106.23  E-value: 5.87e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592   39 GNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFY-ETKTISFECCMVQLFAVHFFTGVEVIVLSAM 117
Cdd:pfam00001   1 GNLLVILVILRNKKL-RTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNhGDWPFGSALCKIVGALFVVNGYASILLLTAI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  118 AYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNvieHFICDLFPLLKLACTNTHIFVIL 197
Cdd:pfam00001  80 SIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGN---VTVCFIDFPEDLSKPVSYTLLIS 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  198 VFAnsgsiCIIIFSLLLVSYGVILFSLRSHSSEGRS--------KALSTCGSHITVVLLFFVPCILIYARNTSAFSFEKN 269
Cdd:pfam00001 157 VLG-----FLLPLLVILVCYTLIIRTLRKSASKQKSsertqrrrKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCELS 231
                         250       260
                  ....*....|....*....|....*
gi 112983592  270 --------VFIFADVLTPLLNPMVY 286
Cdd:pfam00001 232 rlldkalsVTLWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
25-290 3.40e-17

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 79.64  E-value: 3.40e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVH 104
Cdd:cd00637    1 LAVLYILIFVVGLVGNLLVILVILRNRRL-RTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLfpll 184
Cdd:cd00637   80 VSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDL---- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 klacTNTHIFVILVFAnsgSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSH------------ITVVLLFFV- 251
Cdd:cd00637  156 ----TLSKAYTIFLFV---LLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRrrrrerkvtktlLIVVVVFLLc 228
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 112983592 252 --P---CILIYARNTSAFSFEKNVFIFADVLT---PLLNPMVYTFRN 290
Cdd:cd00637  229 wlPyfiLLLLDVFGPDPSPLPRILYFLALLLAylnSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-297 4.24e-13

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 67.97  E-value: 4.24e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd14967    1 LLAVFLSLIILVTVFGNLLVILAVYRNRRL-RTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTlqlPFCGPNVIEHFICDLFPL 183
Cdd:cd14967   80 VLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGW---RDETQPSVVDCECEFTPN 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 lklactNTHIFVILVFAnsgsiCIIIFSLLLVSYGVILFSLRSHssegrSKALSTcgshITVVLLFFVPC---------I 254
Cdd:cd14967  157 ------KIYVLVSSVIS-----FFIPLLIMIVLYARIFRVARRE-----LKAAKT----LAIIVGAFLLCwlpffiiylV 216
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 112983592 255 LIYARNTSAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd14967  217 SAFCPPDCVPPILYAVFFWLGYLNSALNPIIYALFNRDFRRAF 259
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
27-297 4.89e-09

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 56.06  E-value: 4.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd14969    5 VYLSLIGVLGVVLNGLVIIVFLKKKKL-RTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSImNQRLCVILVGIAWAGGFLHSITQII----FTLQLPF--CGPNVIEHFICDL 180
Cdd:cd14969   84 GLVSISTLAALAFERYLVIVRPLKAFRL-SKRRALILIAFIWLYGLFWALPPLFgwssYVPEGGGtsCSVDWYSKDPNSL 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 181 fpllklactnTHIFVILVFANSGSICIIIFslllvSYGVILFSLRSHSSEGRSKALSTCGS-----------HITVVLLF 249
Cdd:cd14969  163 ----------SYIVSLFVFCFFLPLAIIIF-----CYYKIYRTLRKMSKRAARRKNSAITKrtkkaekkvakMVLVMIVA 227
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 112983592 250 FVPCILIYARNTSAFSFEKNVFI--FADVLTPLL-------NPMVYTFRNKEMKNAI 297
Cdd:cd14969  228 FLIAWTPYAVVSLYVSFGGESTIppLLATIPALFaksstiyNPIIYVFMNKQFRRAL 284
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
27-296 1.90e-07

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 51.52  E-value: 1.90e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDaCISSVITPKMIVDFFYETKTISfECCMVQLFAVHFF 106
Cdd:cd14972    3 VVAIVLGVFIVVENSLVLAAIIKNRRLH-KPMYILIANLAAAD-LLAGIAFVFTFLSVLLVSLTPS-PATWLLRKGSLVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 107 TGVEVIV-LSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSItqiiftlqLPFCGPNVIEHFI--C-DLFP 182
Cdd:cd14972   80 SLLASAYsLLAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLAL--------LPVLGWNCVLCDQesCsPLGP 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLklacTNTHIFVILVFAnsgsicIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSH--------ITVVLLFFV--- 251
Cdd:cd14972  152 GL----PKSYLVLILVFF------FIALVIIVFLYVRIFWCLWRHANAIAARQEAAVPAQpstsrklaKTVVIVLGVflv 221
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 112983592 252 ---PCILIYARNTSAFSFEKNVFIFADVLTPLL-----NPMVYTFRNKEMKNA 296
Cdd:cd14972  222 cwlPLLILLVLDVLCPSVCDIQAVFYYFLVLALlnsaiNPIIYAFRLKEMRRA 274
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
25-169 2.49e-07

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 51.08  E-value: 2.49e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVtiLFSPALFGSPMYFFLSFLSFLD---ACISsvITPKMIVDFFYETKTISFECCMV--- 98
Cdd:cd15196    4 IAVLATILVLALFGNSCVLLV--LYRRRRKLSRMHLFILHLSVADllvALFN--VLPQLIWDITYRFYGGDLLCRLVkyl 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 112983592  99 QLFAVHFFTgvevIVLSAMAYDRYVAICKPLHYSSIMNQRlCVILVGIAWAGGFLHSITQ-IIFTLQLPFCG 169
Cdd:cd15196   80 QVVGMYASS----YVLVATAIDRYIAICHPLSSHRWTSRR-VHLMVAIAWVLSLLLSIPQlFIFSYQEVGSG 146
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
27-297 2.52e-07

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 50.99  E-value: 2.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDAcISSVITPKMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd15341    5 VLCTLCGLLCILENVAVLYLILSSPKLRRKPSYLFIGSLALADF-LASVVFACSFVDFHVFHGVDSSAIFLLKLGGVTMS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWaggflhsiTQIIFTLQLPFCGPNV--IEHFICDLFPLL 184
Cdd:cd15341   84 FTASLGSLLLMAFDRYVCIYYPSEYKALVTRKRALVALAVMW--------VLTALIAYLPLMGWNCcpLNSPCSELFPLI 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 185 klacTNTHIFVILVFAnsgsicIIIFSLLLVSYGVILFSLRSH--------SSEGRSKA--------LSTCGSHITVVLL 248
Cdd:cd15341  156 ----PNDYLLSWLLLV------AILLSGIIYTYGHVLWKAHKHvvymekhqDQQGPGNArmrldvrlAKTLGLVLAVLLI 225
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 112983592 249 FFVP--CILIYARNTSAFSFEKNVFIFADVL---TPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15341  226 CWSPvlALMMHSLFTSLSDHIKKAFAFCSTLclvNSMVNPIIYALRSRELRSSL 279
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
28-296 6.59e-07

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 49.62  E-value: 6.59e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  28 LFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITP-KMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd15052    6 LLLLLVIATIGGNILVCLAISLEKRLQNVTNYFLMS-LAIADLLVGLLVMPlSILTELFGGVWPLPLVLCLLWVTLDVLF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPfcgPNVIEHFICDLFpllkl 186
Cdd:cd15052   85 CTASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPIPVLGIIDT---TNVLNNGTCVLF----- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 187 actnTHIFVIlvfanSGSIC--IIIFSLLLVSYGVILFSLRShssegRSKALSTCGSHITVVLLFFVPCILIYARNTSAF 264
Cdd:cd15052  157 ----NPNFVI-----YGSIVafFIPLLIMVVTYALTIRLLSN-----EQKASKVLGIVFAVFVICWCPFFITNILTGLCE 222
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 265 SFEKN-------VFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15052  223 ECNCRispwllsVFVWLGYVSSTINPIIYTIFNKTFRRA 261
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
31-164 3.18e-06

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 47.76  E-value: 3.18e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  31 LVYLATIGGNIVIVVTILFSPAlFGSPMYFFLSFLSFLDACISSV-ITPKMIVDFFYETKTISFECCMV---QLFAVHFF 106
Cdd:cd14986    9 VLFVFTLVGNGLVILVLRRKRK-KRSRVNIFILNLAIADLVVAFFtVLTQIIWEATGEWVAGDVLCRIVkylQVVGLFAS 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 112983592 107 TgvevIVLSAMAYDRYVAICKPLhySSIMNQRLCVILVGIAWAGGFLHSITQ-IIFTLQ 164
Cdd:cd14986   88 T----YILVSMSLDRYQAIVKPM--SSLKPRKRARLMIVVAWVLSFLFSIPQlVIFVER 140
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
24-291 3.23e-06

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 47.98  E-value: 3.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMvqlfAV 103
Cdd:cd14993    2 VLIVLYVVVFLLALVGNSLVIAVVLRNKHM-RTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCK----AV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIV----LSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPN--VIEHFI 177
Cdd:cd14993   77 PYLQGVSVSAsvltLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVYELEEIISSEpgTITIYI 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 178 C-DLFPLLKLactnTHIFVILVFAnsgsICIII-FSLLLVSYGVILFSLRSHSSEGRSKALSTCGSH------------- 242
Cdd:cd14993  157 CtEDWPSPEL----RKAYNVALFV----VLYVLpLLIISVAYSLIGRRLWRRKPPGDRGSANSTSSRrilrskkkvarml 228
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 112983592 243 ITVVLLFFVP-----CILIYARNTSAFSFEKNVFIFADVLTPLL--------NPMVYTFRNK 291
Cdd:cd14993  229 IVVVVLFALSwlpyyVLSILLDFGPLSSEESDENFLLILPFAQLlgysnsaiNPIIYCFMSK 290
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
27-299 5.70e-06

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 47.13  E-value: 5.70e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFEC-CMVQLFAVHF 105
Cdd:cd15306    5 LLILMVIIPTIGGNILVILAVSLEKKLQYATNYFLMS-LAVADLLVGLFVMPIALLTILFEAMWPLPLVlCPIWLFLDVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 106 FTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWaggflhsITQIIFTLQLPFCGPNVIEHFICDLFPLLK 185
Cdd:cd15306   84 FSTASIMHLCAISLDRYIAIKKPIQASQYNSRATAFIKITVVW-------LISIGIAIPVPIKGIETDVDNPNNITCVLT 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 186 lactnTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVP-------CILIYA 258
Cdd:cd15306  157 -----KERFGDFILFGSLAAFFTPLAIMIVTYFLTIHALRKQTITNEQRASKVLGIVFFLFLLMWCPffitnitSVLCDS 231
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 112983592 259 RNTSAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAIKK 299
Cdd:cd15306  232 CNQTTLQMLMEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGR 272
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
24-146 8.50e-06

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 46.38  E-value: 8.50e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15085    2 ILSFLMFLNATFSIFNNVLVIAVTLKNPQLR-NPINIFILNLSFSDLMMALCGTTIVTVTNYEGYFYLGDAFCIFQGFAV 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGI 146
Cdd:cd15085   81 NYFGIVSLWSLTLLAYERYNVVCKPMGGLKLSTKRGYQGLLFI 123
7tmA_Pinopsin cd15084
non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled ...
31-300 9.90e-06

non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Pinopsins are found in the pineal organ of birds, reptiles and amphibians, but are absent from teleosts and mammals. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Pinopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320212 [Multi-domain]  Cd Length: 295  Bit Score: 46.39  E-value: 9.90e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  31 LVYLATIGGNIVIVVTILFSPalFGSPMYFFLSFLSFLD----ACISSVITPKMIVDFFYETKTI-SFECCMVQLFAVhf 105
Cdd:cd15084   20 VVALASFVNGLVIVVSIKYKK--LRSPLNYILVNLAVADllvtLFGSSVSFSNNIVGFFVFGKTMcEFEGFMVSLTGI-- 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 106 ftgVEVIVLSAMAYDRYVAICKPLHySSIMNQRLCVILVGIAWAGGFLHSITQII-FTLQLP-----FCGPNviehficd 179
Cdd:cd15084   96 ---VGLWSLAILAFERYLVICKPMG-DFRFQQRHAVSGCAFTWGWSLLWTSPPLFgWSSYVPeglrtSCGPN-------- 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 180 lfplLKLACTNTHIFVILVFANsgsiCIII-FSLLLVSYGVILFSLRS-----HSSEGRSKALSTCGSHITVVLLFFVPC 253
Cdd:cd15084  164 ----WYTGGTNNNSYILALFVT----CFALpLSTIIFSYSNLLLTLRAvaaqqKESETTQRAEKEVTRMVIAMVMAFLIC 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 112983592 254 ILIYARNTSAFSFEKNVFI----------FADVLTpLLNPMVYTFRNKEMKNAIKKI 300
Cdd:cd15084  236 WLPYATFAMVVATNKDVVIqptlaslpsyFSKTAT-VYNPIIYVFMNKQFRSCLLEL 291
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
24-296 1.10e-05

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 45.95  E-value: 1.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15063    2 ISLLVLTFLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVS-LACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLhsitqIIFTlqlPFCGPNVIEHFICDLFPL 183
Cdd:cd15063   81 VWMCTASILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFV-----ICFP---PLVGWNDGKDGIMDYSGS 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 --LKLACTNTHIFVILVFANSGSICIIIFSLLLVsYGVILFSLRSHSSEGRSKALSTcGSHITVVLLFFVPCILIYARNT 261
Cdd:cd15063  153 ssLPCTCELTNGRGYVIYSALGSFYIPMLVMLFF-YFRIYRAARMETKAAKTVAIIV-GCFIFCWLPFFTVYLVRAFCED 230
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 112983592 262 SAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15063  231 CIPPLLFSVFFWLGYCNSALNPCIYALFSRDFRFA 265
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
24-156 1.65e-05

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 45.34  E-value: 1.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCmvqlfav 103
Cdd:cd15329    2 LIGIVLLIIILGTVVGNALVIIAVCLVKKLRTPSNYLIVS-LAVSDLLVALLVMPLAIIYELSGYWPFGEILC------- 73
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIV-------LSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSI 156
Cdd:cd15329   74 DVWISFDVLLctasilnLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISI 133
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
27-296 2.18e-05

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 45.21  E-value: 2.18e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDAcISSVITPKMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd15099    5 VLCFLAGPVTFLENILVLLTILSSTALRRRPSYLFIGSLALADM-LASVIFTISFLDFHVFHQRDSRNLFLFKLGGVTMA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWaggflhSITQIIFTLQLPFCGPNVIEHFICDLFPLLKl 186
Cdd:cd15099   84 FTASVGSLLLTALDRYLCIYQPSNYKLLVTRTRAKVAILLMW------CVTIIISFLPLMGWRCKTWDSPCSRLFPYID- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 187 actNTHIFVILVFAnsgsicIIIFSLLLVSYGVILFSLRSH------------SSEGRSKA-----LSTCGSHITVVLL- 248
Cdd:cd15099  157 ---RHYLASWTGLQ------LVLLFLIIYAYPYILWKAHRHeanmggpklgrqQVKGQARMrmdirLAKTLSLILLVLAi 227
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 112983592 249 --FFVPCILIYARNTSAFSFEKNVFIFADVL---TPLLNPMVYTFRNKEMKNA 296
Cdd:cd15099  228 cwLPVLAFMLVDVRVTLTNKQKRMFAFCSMLclvNSCVNPIIYALRSRELRGA 280
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
27-255 2.34e-05

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 45.36  E-value: 2.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFF-YETKTISFECCMVQLFAVHF 105
Cdd:cd14997    5 VVYGVIFVVGVLGNVLVGIVVWKNKDM-RTPTNIFLVNLSVADLLVLLVCMPVALVETWaREPWLLGEFMCKLVPFVELT 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 106 FTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFT--LQLPFCGPNVIEhfICDLfPL 183
Cdd:cd14997   84 VAHASVLTILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFITefKEEDFNDGTPVA--VCRT-PA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFAnsgsicIIIFSLLLVSYGVILFSLRSHSS----EGRSKALSTCGSH-------ITVVLLFFVp 252
Cdd:cd14997  161 DTFWKVAYILSTIVVFF------VVPLAILSGLYSVICRRLVGHPAlesrRADAANRHTLRSRrqvvymlITVVVLFFV- 233

                 ...
gi 112983592 253 CIL 255
Cdd:cd14997  234 CLL 236
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
27-296 2.50e-05

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 44.90  E-value: 2.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETK-TISFECCMVQLFAVHF 105
Cdd:cd15305    5 LLILIIIILTIGGNILVIMAVSLEKKLQNATNFFLMS-LAVADMLVGILVMPVSLIAILYDYAwPLPRYLCPIWISLDVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 106 FTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAggflhsiTQIIFTLQLPFCG----PNVIEHFICDLf 181
Cdd:cd15305   84 FSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMMKIAAVWT-------ISIGISMPIPVIGlqddEKVFVNGTCVL- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 182 pllklactNTHIFVILvfaNSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLL-----FFVPCILI 256
Cdd:cd15305  156 --------NDENFVLI---GSFVAFFIPLIIMVITYCLTIQVLQRQQAINNERRASKVLGIVFFLFLimwcpFFITNILS 224
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 112983592 257 Y----ARNTSAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15305  225 VlckeACDQKLMEELLNVFVWVGYVSSGINPLVYTLFNKTYRRA 268
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
96-166 5.76e-05

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 44.08  E-value: 5.76e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 112983592  96 CMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLP 166
Cdd:cd15055   73 CKLHSSLDYILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVLLYDNLNQP 143
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
27-296 6.50e-05

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 43.77  E-value: 6.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETK-TISFECCMVQLFAVHF 105
Cdd:cd15304    5 LLTVIVIILTIAGNILVIMAVSLEKKLQNATNYFLMS-LAIADMLLGFLVMPVSMLTILYGYRwPLPSKLCAVWIYLDVL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 106 FTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPfcgpnviehfiCDLFPLLK 185
Cdd:cd15304   84 FSTASIMHLCAISLDRYIAIRNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDD-----------SKVFKEGS 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 186 LACTNTHIFVILVFAnsgsICIIIFSLLLVSYGVILFSLRsHSSEGRSKALSTCGshiTVVLLFFVPCILIYARNTSAFS 265
Cdd:cd15304  153 CLLADENFVLIGSFV----AFFIPLTIMVITYFLTIKSLQ-QSISNEQKASKVLG---IVFFLFVVMWCPFFITNVMAVI 224
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 112983592 266 FEK-----------NVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15304  225 CKEscnevviggllNVFVWIGYLSSAVNPLVYTLFNKTYRSA 266
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
25-149 8.39e-05

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 43.59  E-value: 8.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  25 LFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCmvqlfavH 104
Cdd:cd15058    3 LLLLLALIILAIVVGNLLVIIAIARTSRLQTMTNIFITS-LACADLVMGLLVVPLGATIVVTGKWQLGNFWC-------E 74
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 112983592 105 FFTGVEVI-------VLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWA 149
Cdd:cd15058   75 LWTSVDVLcvtasieTLCVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWI 126
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
20-164 1.03e-04

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 43.27  E-value: 1.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  20 KVEKILFVLFFLVYLAtigGNIVIVVTIlFSPALFGSPMYFFLSFLSFLDACISSV-ITPKMIVDFFYETKTISFECCMV 98
Cdd:cd15387    1 KVEVTVLALILFLALT---GNICVLLAI-HTTRHKHSRMYFFMKHLSIADLVVAVFqVLPQLIWDITFRFYGPDFLCRLV 76
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 112983592  99 Q-LFAVHFFTGVEVIVLsaMAYDRYVAICKPLHYSSIMNQRLCVILvgiAWAGGFLHSITQI-IFTLQ 164
Cdd:cd15387   77 KyLQVVGMFASTYMLLL--MSIDRCLAICQPLRSLHRRSDRVYVLF---SWLLSLVFSIPQVhIFSLR 139
7tmA_CB1 cd15340
cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G ...
36-296 1.29e-04

cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320462 [Multi-domain]  Cd Length: 292  Bit Score: 42.97  E-value: 1.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  36 TIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDaCISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTGVEVIVLS 115
Cdd:cd15340   14 TVLENLLVLCVILHSRSLRCRPSYHFIGSLAVAD-LLGSVIFVYSFLDFHVFHRKDSPNVFLFKLGGVTASFTASVGSLF 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 116 AMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAggflhsiTQIIFTLqLPFCGPNVIE-HFIC-DLFPLLklactNTHI 193
Cdd:cd15340   93 LTAIDRYISIHRPLAYKRIVTRTKAVIAFCVMWT-------IAIVIAV-LPLLGWNCKKlNSVCsDIFPLI-----DETY 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 194 FVILVFANSGSICIIIFSLLLV-----SYGVILFSLRS------HSSEG---------RSKALSTCGSHITVVLLFFVPC 253
Cdd:cd15340  160 LMFWIGVTSVLLLFIVYAYMYIlwkahHHAVRMLQRGTqksiivYTSEDgkvqttrpdQTRMDIRLAKTLVLILVVLIIC 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 112983592 254 ------ILIYARNTSAFSFEKNVFIFADVLTPL---LNPMVYTFRNKEMKNA 296
Cdd:cd15340  240 wgpllaIMVYDVFGKMNKLIKTVFAFCSMLCLLnstVNPIIYALRSKDLRHA 291
7tmA_GPBAR1 cd15905
G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G ...
37-155 1.47e-04

G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G-protein coupled bile acid receptor GPBAR1 is also known as BG37, TGR5 (Takeda G-protein-coupled receptor 5), M-BAR (membrane-type receptor for bile acids), and GPR131. GPBAR1 is highly expressed in the gastrointestinal tract, but also found at many other tissues including liver, colon, heart, skeletal muscle, and brown adipose tissue. GPBAR1 functions as a membrane-bound receptor specific for bile acids, which are the end products of cholesterol metabolism that facilitate digestion and absorption of lipids or fat-soluble vitamins. Bile acids act as liver-specific metabolic signaling molecules and stimulate liver regeneration by activating GPBAR1 and nuclear receptors such as the farnesoid X receptor (FXR). Upon bile acids binding, GPBAR1 activation causes release of the G-alpha(s) subunit and activation of adenylate cyclase. The increase in intracellular cAMP level then stimulates the expression of many genes via the PKA-mediated phosphorylation of cAMP-response element binding protein (CREB). Thus, GPAR1-signalling exerts various biological effects in immune cells, liver, and metabolic tissues. For example, GPBAR1 activation leads to enhanced energy expenditure in brown adipose tissue and skeletal muscle; stimulation of glucagon-like peptide-1 (GLP-1) production in enteroendocrine L-cells; and inhibition of pro-inflammatory cytokine production in macrophages and attenuation of atherosclerosis development. GPBAR1 is a member of the class A rhodopsin-like family of GPCRs, which comprises receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands.


Pssm-ID: 320571 [Multi-domain]  Cd Length: 272  Bit Score: 42.82  E-value: 1.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  37 IGGNIVIVVTILFSPALFGSPMYFFLSFLsfLDACISSVITPkMIVDFFYETKtISFECCMVQLFAVHFFTGVEVIVLSA 116
Cdd:cd15905   13 IFANLFIILGIACNRKLHNTANYFFLSLL--LADLLTGVALP-FIPGMSNESR-RGYHSCLFVYVAPNFLFLSFLANLLM 88
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 112983592 117 MAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHS 155
Cdd:cd15905   89 VHYERYLCIVYPLQYHNFWVHRWVPLALLLTWALPLLFA 127
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
36-296 1.51e-04

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 42.75  E-value: 1.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  36 TIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTGVEVIVLS 115
Cdd:cd15104   13 IITGNLLVIVALLKLIRKKDTKSNCFLLNLAIADFLVGLAIPGLATDELLSDGENTQKVLCLLRMCFVITSCAASVLSLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 116 AMAYDRYVAICKPLHYSSIMN-QRLCVILVGIAWAGGFLHSITQIIFTLQL----PFCG-------PNVIEHFICDLFP- 182
Cdd:cd15104   93 AIAFDRYLALKQPLRYKQIMTgKSAGALIAGLWLYSGLIGFLPLISPQFQQtsykGKCSffaafhpRVLLVLSCMVFFPa 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVIlVFANSGSICIIIFSLLLVSYgvilfsLRSHSSEgrSKALSTCGSHITVVLLFFVP---CILIYAR 259
Cdd:cd15104  173 LLLFVFCYCDILKI-ARVHSRAIYKVEHALARQIH------PRRTLSD--FKAARTVAVLIGCFLLSWLPfqiTGLVQAL 243
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 112983592 260 NTSAFSFE--KNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15104  244 CDECKLYDvlEDYLWLLGLCNSLLNPWIYAFWQKEVRRA 282
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
24-296 1.80e-04

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 42.34  E-value: 1.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYEtKTISFE---CCMVQL 100
Cdd:cd15067    1 LLGVVLSLFCLVTVAGNLLVILAVLRERYLRTVTNYFIVS-LAVADLLVGSIVMPFSILHEMTG-GYWLFGrdwCDVWHS 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 101 FAVHFFTGvEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIF--TLQLPFCGPNViehfic 178
Cdd:cd15067   79 FDVLASTA-SILNLCVISLDRYWAITDPISYPSRMTKRRALIMIALVWICSALISFPAIAWwrAVDPGPSPPNQ------ 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 179 dlfpllklaCTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHssegrsKALSTCGSHITVVLL----FFVPCI 254
Cdd:cd15067  152 ---------CLFTDDSGYLIFSSCVSFYIPLVVMLFTYYRIYRAAAKEQ------KAAKTLGIVMGVFILcwlpFFVTNI 216
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 112983592 255 LIYARNTSAFSFEKNVFIFADVLTPL---LNPMVYTFRNKEMKNA 296
Cdd:cd15067  217 LIGFCPSNCVSNPDILFPLVTWLGYInsgMNPIIYACSSRDFRRA 261
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
26-296 1.82e-04

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 42.24  E-value: 1.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  26 FVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVdfFYETKTISFECCMVQLFAVHF 105
Cdd:cd14968    4 IVLEVLIAVLSVLGNVLVIWAVKLNRALRTVTNYFIVS-LAVADILVGALAIPLAIL--ISLGLPTNFHGCLFMACLVLV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 106 FTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFICDLFpllk 185
Cdd:cd14968   81 LTQSSIFSLLAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTPMFGWNNGAPLESGCGEGGIQCLF---- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 186 lacTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRSHSSEGRS------------KALSTCGSHITVVLLFFVPC 253
Cdd:cd14968  157 ---EEVIPMDYMVYFNFFACVLVPLLIMLVIYLRIFRVIRKQLRQIESllrsrrsrstlqKEVKAAKSLAIILFLFALCW 233
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 112983592 254 ILIYARNT-SAFSFEKNVFIFADVLTPLL-------NPMVYTFRNKEMKNA 296
Cdd:cd14968  234 LPLHIINCiTLFCPECKVPKILTYIAILLshansavNPIVYAYRIRKFRQT 284
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
24-161 3.34e-04

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 41.64  E-value: 3.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLvylaTIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSV-ITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15197    6 TLWVLFVF----IVVGNSSVLFALWMRKAK-KSRMNFFITQLAIADLCVGLInVLTDIIWRITVEWRAGDFACKVIRYLQ 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VhFFTGVEVIVLSAMAYDRYVAICKPLHYSSimNQRLCVILVGIAWAGGFLHSI-TQIIF 161
Cdd:cd15197   81 V-VVTYASTYVLVALSIDRYDAICHPMNFSQ--SGRQARVLICVAWILSALFSIpMLIIF 137
7tmA_5-HT1B_1D cd15333
serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G ...
24-296 3.56e-04

serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320455 [Multi-domain]  Cd Length: 265  Bit Score: 41.32  E-value: 3.56e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15333    6 SLAVLLALITLATTLSNAFVIATIYLTRKLH-TPANYLIASLAVTDLLVSILVMPISIVYTVTGTWTLGQVVCDIWLSSD 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITqiiftlqlPFCGPNVIEHFIcdlfpl 183
Cdd:cd15333   85 ITCCTASILHLCVIALDRYWAITDAVEYSKKRTPKRAAVMIALVWVISISISLP--------PFFWRQAKAEEE------ 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFANSGSICIIIFsLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVpCILIYARNTSA 263
Cdd:cd15333  151 VSECVVNTDHILYTVYSTVGAFYIPTL-LLIALYGRIYVEARARERKATKTLGIILGAFIVCWLPFFI-ISLVLPICKDA 228
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 112983592 264 FSFEKNVFIF---ADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15333  229 CWFHLAIFDFftwLGYLNSLINPIIYTMSNEDFKQA 264
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
31-149 4.09e-04

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 41.67  E-value: 4.09e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  31 LVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTI-SFECCMVQLFAVHFFTGV 109
Cdd:cd15005    9 LILCVSLAGNLLFSVLIVRDRSLHRAPYYFLLD-LCLADGLRSLACFPFVMASVRHGSGWIyGALSCKVIAFLAVLFCFH 87
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 112983592 110 EVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWA 149
Cdd:cd15005   88 SAFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWT 127
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
32-286 4.54e-04

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 41.14  E-value: 4.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  32 VYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDACISSVITPKMIVdffyETKTISFEC----CMVQLFAVHFFT 107
Cdd:cd15382   10 LFLIAAVGNLTVLLILLRNRRRKRSRVNILLMHLAIADLLVTFIMMPLEIG----WAATVAWLAgdflCRLMLFFRAFGL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 108 GVEVIVLSAMAYDRYVAICKPLhYSSIMNQRLcVILVGIAWAGGFLHSITQ-IIFTLQLPFCGPNVIEHFICDLFPllkl 186
Cdd:cd15382   86 YLSSFVLVCISLDRYFAILKPL-RLSDARRRG-RIMLAVAWVISFLCSIPQsFIFHVESHPCVTWFSQCVTFNFFP---- 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 187 acTNTHIFVILVFaNSGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSH---------------------ITV 245
Cdd:cd15382  160 --SHDHELAYNIF-NMITMYALPLIIIVFCYSLILCEISRKSKEKKEDVSEKSSSVrlrrssvgllerarsrtlkmtIVI 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 112983592 246 VLLF-------FVPCILIYARNTSAFS----FEKNVFIFAdVLTPLLNPMVY 286
Cdd:cd15382  237 VLVFiicwtpyFIMSLWYWFDRESASKvdprIQKGLFLFA-VSNSCMNPIVY 287
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
26-148 4.97e-04

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 41.09  E-value: 4.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  26 FVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETK-TISFECCMVQLFAVH 104
Cdd:cd15217    4 LVLLGLIICVSLAGNLIVSLLVLKDRALHKAPYYFLLD-LCLADTIRSAVCFPFVLVSIRNGSAwTYSVLSCKIVAFMAV 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAW 148
Cdd:cd15217   83 LFCFHAAFMLFCISVTRYMAIAHHRFYSKRMTFWTCIAVICMVW 126
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
24-179 5.61e-04

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 40.84  E-value: 5.61e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15208    2 VLIALYILVFIVGLVGNVLVCFAVWRNHHMRTVTNYFIVN-LSLADFLVIIICLPATLLVDVTETWFFGQVLCKIIPYLQ 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSiMNQRLCVILVGIaWAGGFLHSITQ-IIFTLQLPFCGPNVIEHFI-CD 179
Cdd:cd15208   81 TVSVSVSVLTLSCIALDRWYAICHPLMFKS-TAKRARVSILII-WIVSLLIMIPQaIVMECSRVVPLANKTILLTvCD 156
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
31-157 6.26e-04

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 40.92  E-value: 6.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  31 LVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVdfFYETKTISFECCMVQLFAVHFFTGVE 110
Cdd:cd15070    9 LIGLCAVVGNVLVIWVVKLNPSLRTTTFYFIVS-LALADIAVGVLVIPLAIV--VSLGVTIHFYSCLFMSCLLVVFTHAS 85
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 112983592 111 VIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSIT 157
Cdd:cd15070   86 IMSLLAIAVDRYLRVKLTVRYRIVTTQRRIWLALGLCWLVSFLVGLT 132
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
24-152 6.35e-04

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 40.64  E-value: 6.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSViTPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15079    2 LLGFIYIFLGIVSLLGNGLVIYIFSTTKSL-RTPSNMLVVNLAISDFLMMIK-MPIFIYNSFYEGWALGPLGCQIYAFLG 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGI-AWAGGF 152
Cdd:cd15079   80 SLSGIGSIWTNAAIAYDRYNVIVKPLNGNPLTRGKALLLILFIwLYALPW 129
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
23-297 6.51e-04

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 40.78  E-value: 6.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15083    1 YVLGIFILIIGLIGVVGNGLVIYAFCRFKSL-RTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWaggfLHSITQIIftlqLPFCGPN--VIEHF--IC 178
Cdd:cd15083   80 GGLFGIMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVVW----LYSLLWVL----PPLFGWSryVLEGLltSC 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 179 DLFPLLKLACTNTHIFVILVFANSGSICIIIFSlllvsYGVILFSLRSHSSEGRSKALSTCGSH---------------- 242
Cdd:cd15083  152 SFDYLSRDDANRSYVICLLIFGFVLPLLIIIYC-----YSFIFRAVRRHEKAMKEMAKRFSKSElsspkarrqaevktak 226
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 243 -ITVVLLFFVPCILIYARNTSAfsfekNVFIFADVLTPL--------------LNPMVYTFRNKEMKNAI 297
Cdd:cd15083  227 iALLLVLLFCLAWTPYAVVALI-----GQFGYLEVLTPLataipaafaktsaiYNPVIYAFSHPKFRRAL 291
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
56-163 6.58e-04

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 40.57  E-value: 6.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  56 SPMYFFLSFLSFLDACISSV-ITPKMIVDFFYETKTISFECCMVQLFAVhFFTGVEVIVLSAMAYDRYVAICKPLHYSSI 134
Cdd:cd15385   33 SRMHLFIKHLSLADLVVAFFqVLPQLCWDITYRFYGPDFLCRIVKHLQV-LGMFASTYMLVMMTADRYIAICHPLKTLQQ 111
                         90       100       110
                 ....*....|....*....|....*....|
gi 112983592 135 MNQRlCVILVGIAWAGGFLHSITQ-IIFTL 163
Cdd:cd15385  112 PTKR-SYLMIGSAWALSFILSTPQyFIFSL 140
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
23-297 7.25e-04

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 40.53  E-value: 7.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFFLVYLATIGGNIVIVVTILFSPAlFGSPMYFFLSFLSFLDACISSVITPKMIVdffyeTKTISFECCMVQLFA 102
Cdd:cd15102    1 GATSVVFVAICCFIVLENLLVLIAIWRHMK-FHRPMYYFLGNLALSDLLAGAAYLANILL-----SGARTLRLSPAQWFL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VH--FFTGVEVIVLS--AMAYDRYVAICKPLHYSSIMNQRLcVILVGIAWAGGFLHSItqiiftlqLPFCGPNVIEHFiC 178
Cdd:cd15102   75 REgsMFVALSASVFSllAIAIERHLTMAKMKPYGASKTSRV-LLLIGACWLISLLLGG--------LPILGWNCLGAL-D 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 179 DLFPLLKLACTNTHIFVILVFansgsicIIIFSLLLVSYGVILFSLRS-------HSSEGRSKALSTCgshITVVLLFFV 251
Cdd:cd15102  145 ACSTVLPLYSKHYVLFCVTIF-------AGILAAIVALYARIYCLVRAsgrkatrASASPRSLALLKT---VLIVLLVFI 214
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 112983592 252 PC-----ILIYAR-----NTSAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNAI 297
Cdd:cd15102  215 ACwgplfILLLLDvacpvKTCPILYKADWFLALAVLNSALNPIIYTLRSRELRRAV 270
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-296 7.96e-04

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 40.42  E-value: 7.96e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15061    1 ILISFLILAIIFTIFGNLLVILAVATTRRLRTITNCYIVS-LATADLLVGVLVLPLAIIRQLLGYWPLGSHLCDFWISLD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFlhsitqiiFTLQLPFCGPNviEHFICDLFpl 183
Cdd:cd15061   80 VLLCTASILNLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISL--------LITSPPLVGPS--WHGRRGLG-- 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 lKLACTNTHIFVILvfansGSICIIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCILIYARNTSA 263
Cdd:cd15061  148 -SCYYTYDKGYRIY-----SSMGSFFLPLLLMLFVYLRIFRVIAKERKTAKTLAIVVGCFIVCWLPFFIMYLIEPFCDCQ 221
                        250       260       270
                 ....*....|....*....|....*....|....
gi 112983592 264 FSFEKNVFI-FADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15061  222 FSEALSTAFtWLGYFNSVINPFIYAFYNKDFRRA 255
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
24-171 8.50e-04

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 40.51  E-value: 8.50e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIvIVVTILFSPALFGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15012    1 IFIILYTLVFCCCFFGNL-LVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVH 79
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPN 171
Cdd:cd15012   80 SLSYTASIGILVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTPYFVFSQTVEILVTQ 147
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
31-161 9.60e-04

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 39.95  E-value: 9.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  31 LVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTGVE 110
Cdd:cd17790    9 ILSLVTVTGNLLVLISFKVNSELKTVNNYFLLS-LACADLIIGAFSMNLYTTYILMGHWALGTVACDLWLALDYVASNAS 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 112983592 111 VIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIF 161
Cdd:cd17790   88 VMNLLIISFDRYFSITRPLTYRAKRTPRRAAIMIGLAWLISFVLWAPAILF 138
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
24-296 9.92e-04

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 40.07  E-value: 9.92e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15206    2 LIIPLYSVIFLLAVVGNILVIVTLVQNKRMRTVTNVFLLN-LAVSDLLLAVFCMPFTLVGQLLRNFIFGEVMCKLIPYFQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEhfiCDLFPL 183
Cdd:cd15206   81 AVSVSVSTFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMSPILVFSNLIPMSRPGGHK---CREVWP 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILvfansgSICIIIFSLLLVSYGVILFSLRshssEGRSKALSTCgshITVVLLFFVPCILIYARNTSA 263
Cdd:cd15206  158 NEIAEQAWYVFLDL------MLLVIPGLVMSVAYGLISWTLL----EAKKRVIRML---FVIVVEFFICWTPLYVINTWK 224
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 112983592 264 FSFEKNVFIFADVLTPLL-----------NPMVYTFRNKEMKNA 296
Cdd:cd15206  225 AFDPPSAARYVSSTTISLiqllayisscvNPITYCFMNKRFRQA 268
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
28-159 1.10e-03

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 40.05  E-value: 1.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  28 LFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPkmivdfFYETKTIS-------FECCMVQL 100
Cdd:cd15066    5 AMTLIILAAIFGNLLVIISVMRHRKLRVITNYFVVS-LAMADMLVALCAMT------FNASVEITgrwmfgyFMCDVWNS 77
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 112983592 101 FAVHFFTgVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQI 159
Cdd:cd15066   78 LDVYFST-ASILHLCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLPI 135
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
27-225 1.19e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 39.92  E-value: 1.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVtILFSPALFgSPMYFFLSFLSFLD-----ACISSVITPKMIVDFFYETKTISFECCMVQLF 101
Cdd:cd14978    5 YVLPVICIFGIIGNILNLV-VLTRKSMR-SSTNVYLAALAVSDilvllSALPLFLLPYIADYSSSFLSYFYAYFLPYIYP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 102 AVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQI--IFTLQLPFCGPNVIEHFICD 179
Cdd:cd14978   83 LANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFfeYEVVECENCNNNSYYYVIPT 162
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 112983592 180 LFPLlklacTNTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLR 225
Cdd:cd14978  163 LLRQ-----NETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALR 203
7tmA_S1PR2_Edg5 cd15347
sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial ...
28-294 1.53e-03

sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial differentiation gene 5 (Edg5), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320469 [Multi-domain]  Cd Length: 266  Bit Score: 39.41  E-value: 1.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  28 LFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDACISSVITPKMIVdffyeTKTISFECCMVQLFA---VH 104
Cdd:cd15347    5 IFIVILCCIIVLENLLVLIAVARNKKFHSAMFFFIGNLAFSDLLAGVAFIANILL-----SGSVTFRLTPVQWFIregTA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 105 FFT-GVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLcVILVGIAWAGGflhsitqiIFTLQLPFCGPNVIEHfICDLFPL 183
Cdd:cd15347   80 FITlSASVFSLLAIAIERHVAITKVKLYGSDKNCRM-VLLIGACWVIS--------IVLGGLPILGWNCIGN-LEDCSTV 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 LKLACTNTHIFVILVFAnsgsiciIIFSLLLVSYGVILFSLRSHSSEGRSKALSTCGSHITVVLLFFVPCIL----IYAR 259
Cdd:cd15347  150 LPLYSKHYILFVVTIFS-------IILLSIVILYVRIYCIVRSSHAEMAAPQTLALLKTVTIVLGVFIVCWLpafiILLL 222
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 112983592 260 NTSA------FSFEKNVFIFADVLTPLLNPMVYTFRNKEMK 294
Cdd:cd15347  223 DTSCkvkscpILYKADYFFSVATLNSALNPVIYTLRSKDMR 263
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
24-148 1.83e-03

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 39.35  E-value: 1.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLD----------ACISSVITPKMIVDFFYETKT-IS 92
Cdd:cd15317    2 IIYIVLVLAMLITVSGNLVVIISISHFKQLH-SPTNMLVLSLATADfllglcvmpfSMIRTVETCWYFGDLFCKFHTgLD 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 112983592  93 FECCMVQLFAVHFftgvevivlsaMAYDRYVAICKPLHYSSIMNQRLCVILVGIAW 148
Cdd:cd15317   81 LLLCTTSIFHLCF-----------IAIDRYYAVCDPLRYPSKITVQVAWRFIAIGW 125
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
24-296 1.92e-03

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 39.23  E-value: 1.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCmvqlfav 103
Cdd:cd15064    2 LISVLLSLIILATILGNALVIAAILLTRKLHTPANYLIAS-LAVADLLVAVLVMPLSAVYELTGRWILGQVLC------- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIV-------LSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFtlqlpFCGPNVIEhf 176
Cdd:cd15064   74 DIWISLDVTCctasilhLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFG-----WRTPDSED-- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 177 icdlfpllKLACTNTHIFVILVFANSGSIcIIIFSLLLVSYGVILfslrsHSSEGRSKALSTCGSHITVVLL----FFVP 252
Cdd:cd15064  147 --------PSECLISQDIGYTIFSTFGAF-YIPLLLMLILYWKIY-----RAAARERKAAKTLGIILGAFIVcwlpFFLV 212
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 112983592 253 CILIYARNTSAFSFE-KNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15064  213 ALIVPLCSHCWIPLAlKSFFLWLGYFNSLINPLIYTFFNKDFRKA 257
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
26-161 1.99e-03

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 39.20  E-value: 1.99e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  26 FVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKM-IVDFFYETKTISFECCMVQLFAVh 104
Cdd:cd15390    4 SIVFVVMVLVAIGGNLIVIWIVLAHKRMRTVTNYFLVN-LAVADLLISAFNTVFNfTYLLYNDWPFGLFYCKFSNFVAI- 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 112983592 105 FFTGVEVIVLSAMAYDRYVAICKPLHYSsiMNQRLCVILVGIAWAGGFLHSITQIIF 161
Cdd:cd15390   82 TTVAASVFTLMAISIDRYIAIVHPLRPR--LSRRTTKIAIAVIWLASFLLALPQLLY 136
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
24-156 2.27e-03

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 38.80  E-value: 2.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVylATIGGNIVIVVTILFSPalFGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15001    4 IVYVITFVL--GLIGNSLVIFVVARFRR--MRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQ 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPL---HYSSIMNQRLCVILVgiaWAGGFLHSI 156
Cdd:cd15001   80 LLSFICSVLTLTAISIERYYVILHPMkakSFCTIGRARKVALLI---WILSAILAS 132
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
32-164 2.62e-03

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 39.01  E-value: 2.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  32 VYLATIGGNIViVVTILFSPALFGSPMYFFLSFLSFLDACISSV-ITPKMIVDFFYETKTISFECCMVQLFAVhFFTGVE 110
Cdd:cd15386   10 ILVVATAGNLA-VLLAMYRMRRKMSRMHLFVLHLALTDLVVALFqVLPQLIWEITYRFQGPDLLCRAVKYLQV-LSMFAS 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 112983592 111 VIVLSAMAYDRYVAICKPLHYSSIMNQRLCvILVGIAWAGGFLHSITQI-IFTLQ 164
Cdd:cd15386   88 TYMLIMMTVDRYIAVCHPLRTLQQPSRQAY-LMIGATWLLSCILSLPQVfIFSLR 141
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
24-288 2.65e-03

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 38.81  E-value: 2.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVItPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd14970    2 VIPAVYSVVCVVGLTGNSLVIYVILRYSKMKTVTNIYILN-LAVADELFLLGL-PFLATSYLLGYWPFGEVMCKIVLSVD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNViehfICDL-FP 182
Cdd:cd14970   80 AYNMFTSIFCLTVMSVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLPVIIFARTLQEEGGTI----SCNLqWP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 183 LLKLACTNTHIFVILVFANSGSICIIIfslllVSYGVILFSLRSHSSEGRSKALSTCGSH------ITVVLLFFVPC--- 253
Cdd:cd14970  156 DPPDYWGRVFTIYTFVLGFAVPLLVIT-----VCYSLIIRRLRSSRNLSTSGAREKRRARrkvtrlVLVVVAVFVVCwlp 230
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 112983592 254 --ILIYARNTSAFS---FEKNVFIFADVLT---PLLNPMVYTF 288
Cdd:cd14970  231 fhVFQIVRLLIDPPetlTVVGVFLFCIALSyanSCLNPILYAF 273
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
28-162 3.00e-03

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 38.62  E-value: 3.00e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  28 LFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTI----SFECCMVQLFAV 103
Cdd:cd15103    6 VFLTLGIVSLLENILVILAIAKNKNLH-SPMYFFICSLAVADMLVSVSNALETIVIILLNNGYLvprdSFEQHIDNVIDS 84
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 112983592 104 HFFTGV--EVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFT 162
Cdd:cd15103   85 MICSSLlaSICSLLAIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCGILFIIYS 145
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
95-252 3.10e-03

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 38.79  E-value: 3.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  95 CCMVQLFAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQlpfcGPNVIE 174
Cdd:cd14982   72 LCRLTGLLFYINMYGSILFLTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASVPLLLLRST----IAKENN 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 175 HFICDLFPLLKLACTNTHIFVILVFansgsICIIIFSLLLVSYGVILFSLR-----SHSSEGRSKALSTCGSHITVVLLF 249
Cdd:cd14982  148 STTCFEFLSEWLASAAPIVLIALVV-----GFLIPLLIILVCYSLIIRALRrrskqSQKSVRKRKALRMILIVLAVFLVC 222

                 ...
gi 112983592 250 FVP 252
Cdd:cd14982  223 FLP 225
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
37-153 3.50e-03

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 38.40  E-value: 3.50e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  37 IGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTGVEVIVLSA 116
Cdd:cd15210   15 VPGNLLTVLALLRSKKL-RTRTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYGLVAVSLLTLVL 93
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 112983592 117 MAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFL 153
Cdd:cd15210   94 ITLNRYILIAHPSLYPRIYTRRGLALMIAGTWIFSFG 130
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
24-296 3.52e-03

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 38.18  E-value: 3.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15060    2 VTTILLSVIIAFTIVGNILVILSVFTYRPLRIVQNFFIVS-LAVADLAVAIFVLPLNVAYFLLGKWLFGIHLCQMWLTCD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPfcgPNVIEHFICDLfpl 183
Cdd:cd15060   81 ILCCTASILNLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIGWNDWP---ENFTETTPCTL--- 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 184 lklacTNTHIFVIlvFANSGSICIIIFSLLLVsYGVILFSlrshSSEGRsKALSTCGSHITVVLLFFVPCILIYA----- 258
Cdd:cd15060  155 -----TEEKGYVI--YSSSGSFFIPLLIMTIV-YVKIFIA----TSKER-RAARTLGIIMGVFVVCWLPFFLMYVilpfc 221
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 112983592 259 RNTSAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15060  222 ETCSPSAKVVNFITWLGYVNSALNPVIYTIFNLDFRRA 259
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
27-300 3.94e-03

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 38.39  E-value: 3.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd15307    5 LLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMS-LAITDLMVAVLVMPLGILTLVKGHFPLSSEHCLTWICLDVLF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPfcgPNVIEHFICDL-FPLLK 185
Cdd:cd15307   84 CTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLMYSKDH---ASVLVNGTCQIpDPVYK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 186 LACTNTHIFVILVfansgsiciiifsLLLVSYGVILFSL-RSHSSEGRSKALSTCGSHI------TVVLL---FFVPCIL 255
Cdd:cd15307  161 LVGSIVCFYIPLG-------------VMLLTYCLTVRLLaRQRSRHGRIIRLEQKATKVlgvvffTFVILwspFFVLNLL 227
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 112983592 256 IYARNTSAFSFEKNVFIFADVL---TPLLNPMVYTFRNKEMKNAIKKI 300
Cdd:cd15307  228 PTVCAECEERISHWVFDVVTWLgyaSSMVNPIFYTIFNKVFRQAFKKV 275
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
27-148 4.15e-03

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 38.27  E-value: 4.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd15301    5 IVAAVLSLVTVGGNVMVMISFKIDKQLQTISNYFLFS-LAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAIDYLA 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAW 148
Cdd:cd15301   84 SNASVLNLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAW 125
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
27-161 4.31e-03

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 38.22  E-value: 4.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFF----YETKTISFEC----CMV 98
Cdd:cd15350    5 EVFFTIAAVGLLENLLVLVAVIKNKNLH-SPMYFFICSLAVSDMLGSLYKTLENILIILadmgYLNRRGPFETklddIMD 83
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 112983592  99 QLFAVHFFTgvEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIF 161
Cdd:cd15350   84 SLFCLSLLG--SIFSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIWTFCGGSGILMILF 144
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
32-153 4.53e-03

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 38.24  E-value: 4.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  32 VYLATIGGNIVIVVTILFSPALfGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTGVEV 111
Cdd:cd15928   10 LMLVGASGNLLTVLVIGRSRDM-RTTTNLYLSSLAVSDLLIFLVLPLDLYRLWRYRPWRFGDLLCRLMYFFSETCTYASI 88
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 112983592 112 IVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFL 153
Cdd:cd15928   89 LHITALSVERYLAICHPLRAKVLVTRGRVKLLIAVIWAVAIV 130
7tmA_GPR26_GPR78-like cd15219
G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G ...
24-162 4.81e-03

G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G protein-coupled receptors; Orphan G-protein coupled receptor 26 (GPR26) and GPR78 are constitutively active and coupled to increased cAMP formation. They are closely related based on sequence homology and comprise a conserved subgroup within the class A G-protein coupled receptor (GPCR) superfamily. Both receptors are widely expressed in selected tissues of the brain but their endogenous ligands are unknown. GPR26 knockout mice showed increased levels of anxiety- and depression-like behaviors, whereas GPR78 has been implicated in susceptibility to bipolar affective disorder and schizophrenia. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320347 [Multi-domain]  Cd Length: 264  Bit Score: 37.82  E-value: 4.81e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAV 103
Cdd:cd15219    1 LLAVLLVVVLVVSLLSNLLVLLCFLYSAELRKQVPGIFLLNLSFCNLLLTVLNMPFTLLGVVRNRQPFGDGFCQAVGFLE 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 112983592 104 HFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFT 162
Cdd:cd15219   81 TFLTSNAMLSMAALSIDRWIAVVFPLSYTSKMRYRDAALMVGYSWLHSLTFSLVALFLS 139
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
32-296 5.17e-03

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 38.04  E-value: 5.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  32 VYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFTGVEV 111
Cdd:cd15330   10 LILCAIFGNACVVAAIALERSLQNVANYLIGS-LAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSI 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 112 IVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQII-FTLQLPFCGPNviehficdlfpllklACTN 190
Cdd:cd15330   89 LHLCAIALDRYWAITDPIDYVNKRTPRRAAVLISLTWLIGFSISIPPMLgWRTPEDRSDPD---------------ACTI 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 191 THIFVILVFANSGSICIIIFsLLLVSYGVILfslRSHSSEGRS-KALSTC-GSHITVVLLFFVPCILIYARNTSAFSFE- 267
Cdd:cd15330  154 SKDPGYTIYSTFGAFYIPLI-LMLVLYGRIF---KAAARERKTvKTLGIImGTFILCWLPFFIVALVLPFCESTCHMPEl 229
                        250       260       270
                 ....*....|....*....|....*....|
gi 112983592 268 -KNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15330  230 lGAIINWLGYSNSLLNPIIYAYFNKDFQSA 259
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
24-155 5.56e-03

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 37.72  E-value: 5.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVD------FFYETKTISFECCM 97
Cdd:cd15312    2 AMYLFMAGAILLTVFGNLMVIISISHFKQLH-SPTNFLILSLAITDFLLGFLVMPYSMVRsvescwYFGDLFCKIHSSLD 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 112983592  98 VQLFAVHFFTgvevivLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHS 155
Cdd:cd15312   81 MMLSTTSIFH------LCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFA 132
7tmA_MC1R cd15351
melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G ...
28-161 6.21e-03

melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320473 [Multi-domain]  Cd Length: 271  Bit Score: 37.46  E-value: 6.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  28 LFFLVYLATIGGNIVIVVTILFSPALFgSPMYFFLSFLSFLDACISSVITPKMIVDFFYETKTISFECCMVQlfavHFFT 107
Cdd:cd15351    6 LFLFLGLVSLVENILVVVAIAKNRNLH-SPMYYFICCLAVSDMLVSVSNLIETLFMLLLEHGVLVCRAPMLQ----HMDN 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 112983592 108 GVEVIVLSAM----------AYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIF 161
Cdd:cd15351   81 VIDTMICSSVvsslsflgaiAVDRYITIFYALRYHSIMTLQRAVNAIAGIWLASTVSSTLFIVY 144
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
24-227 6.26e-03

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 37.72  E-value: 6.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  24 ILFVLFFLVYLAtIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISS-VITPKMIVDFFYETKTISFECCMVQLFA 102
Cdd:cd15065    2 IGIFLSLIIVLA-IFGNVLVCLAIFTDRRLRKKSNLFIVS-LAVADLLVALlVMTFAVVNDLLGYWLFGETFCNIWISFD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGvEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIiftlQLPFCGPNVIEHFICDLFP 182
Cdd:cd15065   80 VMCSTA-SILNLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFLPI----HLGWHRLSQDEIKGLNHAS 154
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 112983592 183 LLKLACTNTHIFVILVFanSGSICIIIFSLLLVS-YGVILFSLRSH 227
Cdd:cd15065  155 NPKPSCALDLNPTYAVV--SSLISFYIPCLVMLLiYSRLYLYARKH 198
7tmA_S1PR3_Edg3 cd15345
sphingosine-1-phosphate receptor subtype 3 (S1PR3 or S1P3), also called endothelial ...
28-296 8.10e-03

sphingosine-1-phosphate receptor subtype 3 (S1PR3 or S1P3), also called endothelial differentiation gene 3 (Edg3), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320467 [Multi-domain]  Cd Length: 270  Bit Score: 37.11  E-value: 8.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  28 LFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLSFLDaCISSVITPKMIVDFFYETKTISFECCMVQLFAVHFFT 107
Cdd:cd15345    5 IFFLVICSFIVLENLMVLIAIWKNNRFHNRMYFFIGNLALCD-LLAGIAYKVNILMSGKKTFSLSPTQWFLREGSMFVAL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 108 GVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLcVILVGIAWAGGFLHSitqiiftlQLPFCGPNVIEHfICDLFPLLKLA 187
Cdd:cd15345   84 GASTFSLLAIAIERHLTMIKMRPYDANKRYRV-FLLIGTCWLISVLLG--------ALPILGWNCLDN-LPDCSTILPLY 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 188 CTNTHIFVILVFansgsicIIIFSLLLVSYGVILFSLRS-------HSSEGRSKAL-----------STCGSHITVVLLF 249
Cdd:cd15345  154 SKKYVAFCISIF-------IAILVAIVILYARIYILVKSssrrvtnHRNSERSMALlrtvvivvgvfIACWSPLFILLLI 226
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 112983592 250 FVPCiliyARNTSAFSFEKNVFIFADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15345  227 DVAC----EVKQCPILYKADWFIALAVLNSAMNPIIYTLASKEMRRA 269
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
27-296 8.10e-03

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 37.49  E-value: 8.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSF----LSFLDACISSVITPKMIVDFFYETktisfeccmVQLFA 102
Cdd:cd15979    5 LLYSVIFLLSVFGNMLIIVVLGLNKRLRTVTNSFLLSLalsdLMLAVFCMPFTLIPNLMGTFIFGE---------VICKA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 103 VHFFTGVEVIV----LSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIFTLQLPFCGPNVIEHFIC 178
Cdd:cd15979   76 VAYLMGVSVSVstfsLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPVYSVTVPVPVGDRPRGHQC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592 179 DL-FPLLKLACTNTHIFVILVFANSGSICIiifslllVSYGVILFSL-RSHSSEGRSKALStcgshITVVLLFFVPCILI 256
Cdd:cd15979  156 RHaWPSAQVRQAWYVLLLLILFFIPGVVMI-------VAYGLISRELyRGLLAKKRVIRML-----VVIVAMFFLCWLPI 223
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 112983592 257 YARNT----------SAFSFEKNVFI-FADVLTPLLNPMVYTFRNKEMKNA 296
Cdd:cd15979  224 FSANTwrafdplsahRALSGAPISFIhLLSYTSACVNPLVYCFMNRRFRKA 274
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
23-161 9.14e-03

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 37.23  E-value: 9.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  23 KILFVLFF--LVYLATIGGNIVIVVTILFSPALFGSPMYFFLSfLSFLDACISSVITPKMIVDFFYETKTISFECCMVQL 100
Cdd:cd15299    2 QVVLIAFLtgILALVTIIGNILVIVSFKVNKQLKTVNNYFLLS-LACADLIIGVISMNLFTTYIIMNRWALGNLACDLWL 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 112983592 101 FAVHFFTGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHSITQIIF 161
Cdd:cd15299   81 SIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILF 141
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
27-155 9.18e-03

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 37.13  E-value: 9.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 112983592  27 VLFFLVYLATIGGNIVIVVTILFSPALFGSPMYFFLSFLsFLDACISSVITPKMIVDFFYETKTISFECCMVQLFAVHFF 106
Cdd:cd15215    4 VLIVIFLCASLFGNIVLLLVFQRKPQLLQVANRFIFNLL-VADLLQTVLVMPWVIATSVPLFWPLDSHLCTALVVLMHLF 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 112983592 107 TGVEVIVLSAMAYDRYVAICKPLHYSSIMNQRLCVILVGIAWAGGFLHS 155
Cdd:cd15215   83 AFAGVNTIVVVSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTWIVSVLQS 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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