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Conserved domains on  [gi|22538794|ref|NP_665859|]
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programmed cell death protein 10 [Homo sapiens]

Protein Classification

programmed cell death protein 10( domain architecture ID 10536305)

programmed cell death protein 10 (PDCD10/CCM3) modulates apoptotic pathways

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF1241 pfam06840
Protein of unknown function (DUF1241); This family consists of several programmed cell death ...
14-161 1.12e-85

Protein of unknown function (DUF1241); This family consists of several programmed cell death 10 protein (PDCD10 or TFAR15) sequences. The function of this family is unknown.


:

Pssm-ID: 462018  Cd Length: 150  Bit Score: 249.88  E-value: 1.12e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22538794    14 TTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAAD-DVEEYM 92
Cdd:pfam06840   1 TSSVSSLVLPVLIRPILDKLEKKDVAAAQTLRAAFTKAEKSHPGFTYDLVMGILKKADLSVNLNESLLRLQGTiDSEEYR 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22538794    93 IERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQY-QNRRALE 161
Cdd:pfam06840  81 LNRREDEFQELNKKARALKKILSRIPDEINDRKTFLETIKDIASAIKKLLDAVNEVFKYIPGpQNKQALE 150
 
Name Accession Description Interval E-value
DUF1241 pfam06840
Protein of unknown function (DUF1241); This family consists of several programmed cell death ...
14-161 1.12e-85

Protein of unknown function (DUF1241); This family consists of several programmed cell death 10 protein (PDCD10 or TFAR15) sequences. The function of this family is unknown.


Pssm-ID: 462018  Cd Length: 150  Bit Score: 249.88  E-value: 1.12e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22538794    14 TTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAAD-DVEEYM 92
Cdd:pfam06840   1 TSSVSSLVLPVLIRPILDKLEKKDVAAAQTLRAAFTKAEKSHPGFTYDLVMGILKKADLSVNLNESLLRLQGTiDSEEYR 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22538794    93 IERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQY-QNRRALE 161
Cdd:pfam06840  81 LNRREDEFQELNKKARALKKILSRIPDEINDRKTFLETIKDIASAIKKLLDAVNEVFKYIPGpQNKQALE 150
 
Name Accession Description Interval E-value
DUF1241 pfam06840
Protein of unknown function (DUF1241); This family consists of several programmed cell death ...
14-161 1.12e-85

Protein of unknown function (DUF1241); This family consists of several programmed cell death 10 protein (PDCD10 or TFAR15) sequences. The function of this family is unknown.


Pssm-ID: 462018  Cd Length: 150  Bit Score: 249.88  E-value: 1.12e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22538794    14 TTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAAD-DVEEYM 92
Cdd:pfam06840   1 TSSVSSLVLPVLIRPILDKLEKKDVAAAQTLRAAFTKAEKSHPGFTYDLVMGILKKADLSVNLNESLLRLQGTiDSEEYR 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22538794    93 IERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQY-QNRRALE 161
Cdd:pfam06840  81 LNRREDEFQELNKKARALKKILSRIPDEINDRKTFLETIKDIASAIKKLLDAVNEVFKYIPGpQNKQALE 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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