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Conserved domains on  [gi|21358559|ref|NP_651733|]
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neyo, isoform A [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ZP super family cl42957
Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona ...
 381-615 1.53e-17

Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).


The actual alignment was detected with superfamily member smart00241:

Pssm-ID: 214579  Cd Length: 252  Bit Score: 82.82  E-value: 1.53e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    381 ECGGGDMLARIRTSKLFNGKVYAKG---SPKSCSVDVKSALDFELRM--NYHDleCNVRQSTAGR---YVNDIIIQ-HHD 451
Cdd:smart00241   1 QCGEDQMVVSVSTDLLFPGGINVKGltlGDPSCRPQFTDATSAFVSFevPLNG--CGTRRQVNPDgivYSNTLVVSpFHP 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    452 MIVTSSD-LGLALACQYDLTNKSVSNgvdLDVrGDIMPALSEEVIVESPNVIMRI--TSRDGSDMMRSA-EVGDPLALKF 527
Cdd:smart00241  79 GFITRDDrAAYHFQCFYPENEKVSLN---LDV-STIPPTELSSVSEGPLTCSYRLykDDSFGSPYQSADyVLGDPVYHEW 154

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    528 EIVDEQSP-YEIFIRELVAMDGVDNSEI---TLIDsNGCPTDHFIMGPIykgSVSGKMLLS---NFDAFKFPSSEVVQFR 600
Cdd:smart00241 155 ECDGADDPpLGLLVDNCYATPGPDPSSGpkyFIID-NGCPVDGYLDSTI---PYNSNPLHRarfSVKVFKFADRSLVYFH 230

                          250
                   ....*....|....*....
gi 21358559    601 ALVTPCM----PSCEPVQC 615
Cdd:smart00241 231 CQIRLCDkddgSSCDGPAC 249
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 211-285 4.29e-17

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


:

Pssm-ID: 238532  Cd Length: 80  Bit Score: 76.35  E-value: 4.29e-17
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 21358559 211 RVQNYKLKTEVKRTVSVASRRECFELCLGENDFTCRSANYDRTSGACELSELDRLTLAGSQAFQVNdgSDYLENH 285
Cdd:cd01099   8 LVLNKILVSEVKTEITVASLEECLRKCLEETEFTCRSFNYNYKSKECILSDEDRMSSGVKLLYDSN--VDYYENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 294-373 7.29e-11

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


:

Pssm-ID: 459635  Cd Length: 76  Bit Score: 58.72  E-value: 7.29e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559   294 CEFKRLPGRILKTVDSVYQEVSSIDECRELCLNSPyRCHSYDYNdTGDMVCRLSHHSRATLADVQEPFLEVpeaSTYELT 373
Cdd:pfam00024   1 CDFERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP-RCRSFTYN-PKSKKCHLKSSSSGSLPRLKRSDNKV---DYYEKS 75
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 120-197 1.19e-06

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


:

Pssm-ID: 459635  Cd Length: 76  Bit Score: 46.78  E-value: 1.19e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559   120 FEIVTGYVFSapeKLMDSQPGTLMLTDCLDTCRKNKTCQSVNYE--TGLCVLFSAHADQLPGaLTKSQFPVftIYAQKSC 197
Cdd:pfam00024   3 FERVPGSSLS---GVDVSTVTVSSAEECAQRCTNEPRCRSFTYNpkSKKCHLKSSSSGSLPR-LKRSDNKV--DYYEKSC 76
 
Name Accession Description Interval E-value
ZP smart00241
Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona ...
 381-615 1.53e-17

Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).


Pssm-ID: 214579  Cd Length: 252  Bit Score: 82.82  E-value: 1.53e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    381 ECGGGDMLARIRTSKLFNGKVYAKG---SPKSCSVDVKSALDFELRM--NYHDleCNVRQSTAGR---YVNDIIIQ-HHD 451
Cdd:smart00241   1 QCGEDQMVVSVSTDLLFPGGINVKGltlGDPSCRPQFTDATSAFVSFevPLNG--CGTRRQVNPDgivYSNTLVVSpFHP 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    452 MIVTSSD-LGLALACQYDLTNKSVSNgvdLDVrGDIMPALSEEVIVESPNVIMRI--TSRDGSDMMRSA-EVGDPLALKF 527
Cdd:smart00241  79 GFITRDDrAAYHFQCFYPENEKVSLN---LDV-STIPPTELSSVSEGPLTCSYRLykDDSFGSPYQSADyVLGDPVYHEW 154

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    528 EIVDEQSP-YEIFIRELVAMDGVDNSEI---TLIDsNGCPTDHFIMGPIykgSVSGKMLLS---NFDAFKFPSSEVVQFR 600
Cdd:smart00241 155 ECDGADDPpLGLLVDNCYATPGPDPSSGpkyFIID-NGCPVDGYLDSTI---PYNSNPLHRarfSVKVFKFADRSLVYFH 230

                          250
                   ....*....|....*....
gi 21358559    601 ALVTPCM----PSCEPVQC 615
Cdd:smart00241 231 CQIRLCDkddgSSCDGPAC 249
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 211-285 4.29e-17

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 76.35  E-value: 4.29e-17
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 21358559 211 RVQNYKLKTEVKRTVSVASRRECFELCLGENDFTCRSANYDRTSGACELSELDRLTLAGSQAFQVNdgSDYLENH 285
Cdd:cd01099   8 LVLNKILVSEVKTEITVASLEECLRKCLEETEFTCRSFNYNYKSKECILSDEDRMSSGVKLLYDSN--VDYYENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 210-286 2.33e-11

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 59.87  E-value: 2.33e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 21358559   210 DRVQNYKLKTEVKRTVSVASRRECFELCLGENDftCRSANYDRTSGACELSELDRLTLagSQAFQVNDGSDYLENHC 286
Cdd:pfam00024   4 ERVPGSSLSGVDVSTVTVSSAEECAQRCTNEPR--CRSFTYNPKSKKCHLKSSSSGSL--PRLKRSDNKVDYYEKSC 76
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 294-373 7.29e-11

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 58.72  E-value: 7.29e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559   294 CEFKRLPGRILKTVDSVYQEVSSIDECRELCLNSPyRCHSYDYNdTGDMVCRLSHHSRATLADVQEPFLEVpeaSTYELT 373
Cdd:pfam00024   1 CDFERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP-RCRSFTYN-PKSKKCHLKSSSSGSLPRLKRSDNKV---DYYEKS 75
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 211-285 4.81e-07

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 47.96  E-value: 4.81e-07
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 21358559    211 RVQNYKLKTEVKRTVSVASRRECFELCLgENDFTCRSANYDRTSGACELSELDRLtlaGSQAFQVNDGSDYLENH 285
Cdd:smart00473   8 RLPNTKLPGFSRIVISVASLEECASKCL-NSNCSCRSFTYNNGTKGCLLWSESSL---GDARLFPSGGVDLYEKI 78
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 293-373 1.12e-06

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 46.69  E-value: 1.12e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559 293 LCEFKRLPGRILKTVDSVYQE--VSSIDECRELCLNS-PYRCHSYDYNDTgDMVCRLSHHSRATLadvQEPFLEVPEAST 369
Cdd:cd01099   1 LNDFKFVLVLNKILVSEVKTEitVASLEECLRKCLEEtEFTCRSFNYNYK-SKECILSDEDRMSS---GVKLLYDSNVDY 76


                ....
gi 21358559 370 YELT 373
Cdd:cd01099  77 YENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 120-197 1.19e-06

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 46.78  E-value: 1.19e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559   120 FEIVTGYVFSapeKLMDSQPGTLMLTDCLDTCRKNKTCQSVNYE--TGLCVLFSAHADQLPGaLTKSQFPVftIYAQKSC 197
Cdd:pfam00024   3 FERVPGSSLS---GVDVSTVTVSSAEECAQRCTNEPRCRSFTYNpkSKKCHLKSSSSGSLPR-LKRSDNKV--DYYEKSC 76
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 296-351 4.48e-05

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 42.18  E-value: 4.48e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 21358559    296 FKRLPGRILKTVDSVYQEVSSIDECRELCLNSPYRCHSYDYNDTGdMVCRLSHHSR 351
Cdd:smart00473   6 FVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGT-KGCLLWSESS 60
 
Name Accession Description Interval E-value
ZP smart00241
Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona ...
 381-615 1.53e-17

Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).


Pssm-ID: 214579  Cd Length: 252  Bit Score: 82.82  E-value: 1.53e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    381 ECGGGDMLARIRTSKLFNGKVYAKG---SPKSCSVDVKSALDFELRM--NYHDleCNVRQSTAGR---YVNDIIIQ-HHD 451
Cdd:smart00241   1 QCGEDQMVVSVSTDLLFPGGINVKGltlGDPSCRPQFTDATSAFVSFevPLNG--CGTRRQVNPDgivYSNTLVVSpFHP 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    452 MIVTSSD-LGLALACQYDLTNKSVSNgvdLDVrGDIMPALSEEVIVESPNVIMRI--TSRDGSDMMRSA-EVGDPLALKF 527
Cdd:smart00241  79 GFITRDDrAAYHFQCFYPENEKVSLN---LDV-STIPPTELSSVSEGPLTCSYRLykDDSFGSPYQSADyVLGDPVYHEW 154

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559    528 EIVDEQSP-YEIFIRELVAMDGVDNSEI---TLIDsNGCPTDHFIMGPIykgSVSGKMLLS---NFDAFKFPSSEVVQFR 600
Cdd:smart00241 155 ECDGADDPpLGLLVDNCYATPGPDPSSGpkyFIID-NGCPVDGYLDSTI---PYNSNPLHRarfSVKVFKFADRSLVYFH 230

                          250
                   ....*....|....*....
gi 21358559    601 ALVTPCM----PSCEPVQC 615
Cdd:smart00241 231 CQIRLCDkddgSSCDGPAC 249
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 211-285 4.29e-17

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 76.35  E-value: 4.29e-17
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 21358559 211 RVQNYKLKTEVKRTVSVASRRECFELCLGENDFTCRSANYDRTSGACELSELDRLTLAGSQAFQVNdgSDYLENH 285
Cdd:cd01099   8 LVLNKILVSEVKTEITVASLEECLRKCLEETEFTCRSFNYNYKSKECILSDEDRMSSGVKLLYDSN--VDYYENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 210-286 2.33e-11

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 59.87  E-value: 2.33e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 21358559   210 DRVQNYKLKTEVKRTVSVASRRECFELCLGENDftCRSANYDRTSGACELSELDRLTLagSQAFQVNDGSDYLENHC 286
Cdd:pfam00024   4 ERVPGSSLSGVDVSTVTVSSAEECAQRCTNEPR--CRSFTYNPKSKKCHLKSSSSGSL--PRLKRSDNKVDYYEKSC 76
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 294-373 7.29e-11

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 58.72  E-value: 7.29e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559   294 CEFKRLPGRILKTVDSVYQEVSSIDECRELCLNSPyRCHSYDYNdTGDMVCRLSHHSRATLADVQEPFLEVpeaSTYELT 373
Cdd:pfam00024   1 CDFERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP-RCRSFTYN-PKSKKCHLKSSSSGSLPRLKRSDNKV---DYYEKS 75
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 211-285 4.81e-07

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 47.96  E-value: 4.81e-07
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 21358559    211 RVQNYKLKTEVKRTVSVASRRECFELCLgENDFTCRSANYDRTSGACELSELDRLtlaGSQAFQVNDGSDYLENH 285
Cdd:smart00473   8 RLPNTKLPGFSRIVISVASLEECASKCL-NSNCSCRSFTYNNGTKGCLLWSESSL---GDARLFPSGGVDLYEKI 78
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 293-373 1.12e-06

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 46.69  E-value: 1.12e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559 293 LCEFKRLPGRILKTVDSVYQE--VSSIDECRELCLNS-PYRCHSYDYNDTgDMVCRLSHHSRATLadvQEPFLEVPEAST 369
Cdd:cd01099   1 LNDFKFVLVLNKILVSEVKTEitVASLEECLRKCLEEtEFTCRSFNYNYK-SKECILSDEDRMSS---GVKLLYDSNVDY 76


                ....
gi 21358559 370 YELT 373
Cdd:cd01099  77 YENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 120-197 1.19e-06

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 46.78  E-value: 1.19e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21358559   120 FEIVTGYVFSapeKLMDSQPGTLMLTDCLDTCRKNKTCQSVNYE--TGLCVLFSAHADQLPGaLTKSQFPVftIYAQKSC 197
Cdd:pfam00024   3 FERVPGSSLS---GVDVSTVTVSSAEECAQRCTNEPRCRSFTYNpkSKKCHLKSSSSGSLPR-LKRSDNKV--DYYEKSC 76
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 296-351 4.48e-05

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 42.18  E-value: 4.48e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 21358559    296 FKRLPGRILKTVDSVYQEVSSIDECRELCLNSPYRCHSYDYNDTGdMVCRLSHHSR 351
Cdd:smart00473   6 FVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGT-KGCLLWSESS 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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