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Conserved domains on  [gi|24648784|ref|NP_650979|]
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uncharacterized protein Dmel_CG5849, isoform A [Drosophila melanogaster]

Protein Classification

M1 family metallopeptidase( domain architecture ID 10176184)

M1 family metallopeptidase containing an ERAP1-like C-terminal domain with HEAT-like repeats is a zinc-dependent metallopeptidase with an HEXXH motif as part of its active site, similar to aminopeptidase N, a broad specificity aminopeptidase, and glutamyl aminopeptidase, which releases N-terminal glutamate from a peptide

EC:  3.4.11.-
Gene Ontology:  GO:0008237|GO:0008270|GO:0006508
MEROPS:  M1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
M1_APN-Q_like cd09601
Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), ...
38-492 1.02e-159

Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); This M1 peptidase family includes eukaryotic and bacterial members: the catalytic domains of aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease, preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1, also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP), or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


:

Pssm-ID: 341064 [Multi-domain]  Cd Length: 442  Bit Score: 476.69  E-value: 1.02e-159
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  38 LFYQLHISSDIHKgqLLFSGNATIDVAIRQSTNEIVLHAKNLTdiqITVHRLMAEGSEIVDDLTHTLHPTAALLIIHPIE 117
Cdd:cd09601   1 LHYDLTLTPDLEN--FTFSGSVTITLEVLEPTDTIVLHAKDLT---ITSASLTLKGGSGIIEVTVVTDEETEFLTITLDE 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 118 NyqaFEEGQQYRLEILYTAIMASRPAGLYYMDYRDEENNhTVYVAATQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSH 197
Cdd:cd09601  76 T---LPPGENYTLSIEFTGKLNDDLRGFYRSSYTDEDGE-TRYLAATQFEPTDARRAFPCFDEPAFKATFDITITHPKGY 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 198 SAISNMP-VKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFGSISETY-RGITQSIYTSPTSKEKGQVALKNAVRTVAAL 275
Cdd:cd09601 152 TALSNMPpVESTELEDGWKTTTFETTPPMSTYLVAFVVGDFEYIESTTkSGVPVRVYARPGKIEQGDFALEVAPKILDFY 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 276 EDYFGVSYPLPKLDHVALKKNYGAAMENWGLITYKDVNLL--KNISSDGQKRKL-DLITqnHEIAHQWFGNLVSPEWWTY 352
Cdd:cd09601 232 EDYFGIPYPLPKLDLVAIPDFAAGAMENWGLITYRETALLydPKTSSASDKQRVaEVIA--HELAHQWFGNLVTMKWWDD 309
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 353 TWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMSHYVEGEKDIMGVFDIISYKRGACVIKMFHH 432
Cdd:cd09601 310 LWLNEGFATYMEYLAVDKLFPEWNMWDQFVVDELQSALELDSLASSHPIEVPVESPSEISEIFDAISYSKGASVLRMLEN 389
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 433 AFRQKLFVRGISHFLEKYRYSVANELNLFDALHSELQDDEYFShqpwasrIREIMLSWTH 492
Cdd:cd09601 390 FLGEEVFRKGLRKYLKKHAYGNATTDDLWEALQEASGESKPLD-------VKEIMDSWTL 442
ERAP1_C pfam11838
ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 ...
569-841 1.46e-24

ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase.


:

Pssm-ID: 463368 [Multi-domain]  Cd Length: 316  Bit Score: 105.43  E-value: 1.46e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   569 WIMVNKQHTGFYLVRYDTDNLMAIARQLqtNHSVIHPINRLGLFRDLGPLIEHNEIEqVEVVFELLKYLELEEDVLTWNQ 648
Cdd:pfam11838   1 WVKLNADDTGYYRVNYDPESLAALLEQL--LSKVLSPLDRAGLIDDAFALARAGELS-TSDALDLVLAYLNETDYVVWSA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   649 LQDTIECLTRNLHGTSSQSLFNEFVRRLVGPTFRRV-YVEQGVNLAEDGMFRG-ILEIACSADLPECLEYTRRLAKEhii 726
Cdd:pfam11838  78 ALSQLSTLRSLLSADPEYEALKAFLRKLLSPLAEKLgWEAPPGESHLDRQLRAlLLSAACSAGDPECVAEAKKLFDA--- 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   727 dkiyFKDGSDyhaIID-----SVLCMGVRYLSDQDFQRIIDMMQEiDRASVYYDDIIYALRCTQSHRHLLYYLEglmgen 801
Cdd:pfam11838 155 ----WLDGDD---AIPpdlrwAVYCAAVANGGEAEWDALLERYRD-TTSPSEKERALRALAATPDPELLQRALE------ 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 24648784   802 sthMVLSEFE----DLMYLLYIYKSNLASRPVIWQYIERNYKVL 841
Cdd:pfam11838 221 ---LALDSDEvrnqDLRAVIAGLASNPAGRDLAWDFVKENWDAL 261
 
Name Accession Description Interval E-value
M1_APN-Q_like cd09601
Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), ...
38-492 1.02e-159

Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); This M1 peptidase family includes eukaryotic and bacterial members: the catalytic domains of aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease, preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1, also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP), or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341064 [Multi-domain]  Cd Length: 442  Bit Score: 476.69  E-value: 1.02e-159
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  38 LFYQLHISSDIHKgqLLFSGNATIDVAIRQSTNEIVLHAKNLTdiqITVHRLMAEGSEIVDDLTHTLHPTAALLIIHPIE 117
Cdd:cd09601   1 LHYDLTLTPDLEN--FTFSGSVTITLEVLEPTDTIVLHAKDLT---ITSASLTLKGGSGIIEVTVVTDEETEFLTITLDE 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 118 NyqaFEEGQQYRLEILYTAIMASRPAGLYYMDYRDEENNhTVYVAATQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSH 197
Cdd:cd09601  76 T---LPPGENYTLSIEFTGKLNDDLRGFYRSSYTDEDGE-TRYLAATQFEPTDARRAFPCFDEPAFKATFDITITHPKGY 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 198 SAISNMP-VKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFGSISETY-RGITQSIYTSPTSKEKGQVALKNAVRTVAAL 275
Cdd:cd09601 152 TALSNMPpVESTELEDGWKTTTFETTPPMSTYLVAFVVGDFEYIESTTkSGVPVRVYARPGKIEQGDFALEVAPKILDFY 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 276 EDYFGVSYPLPKLDHVALKKNYGAAMENWGLITYKDVNLL--KNISSDGQKRKL-DLITqnHEIAHQWFGNLVSPEWWTY 352
Cdd:cd09601 232 EDYFGIPYPLPKLDLVAIPDFAAGAMENWGLITYRETALLydPKTSSASDKQRVaEVIA--HELAHQWFGNLVTMKWWDD 309
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 353 TWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMSHYVEGEKDIMGVFDIISYKRGACVIKMFHH 432
Cdd:cd09601 310 LWLNEGFATYMEYLAVDKLFPEWNMWDQFVVDELQSALELDSLASSHPIEVPVESPSEISEIFDAISYSKGASVLRMLEN 389
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 433 AFRQKLFVRGISHFLEKYRYSVANELNLFDALHSELQDDEYFShqpwasrIREIMLSWTH 492
Cdd:cd09601 390 FLGEEVFRKGLRKYLKKHAYGNATTDDLWEALQEASGESKPLD-------VKEIMDSWTL 442
PepN COG0308
Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];
22-531 2.00e-86

Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];


Pssm-ID: 440077 [Multi-domain]  Cd Length: 609  Bit Score: 289.62  E-value: 2.00e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  22 MGERERSLRLPNATY-PLFYQLHIssDIHKGQLLFSGNATIDV-AIRQSTNEIVLHAKNLTdiqitVHRLMAEGSEI--- 96
Cdd:COG0308   1 MKRLTRLEAYRPPGYdVTHYDLDL--DLDPATTRLSGTATITFtATEAPLDSLVLDLKGLE-----VTSVTVDGKPLdft 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  97 VDDLTHTLHPTAALliihpienyqafEEGQQYRLEILYTAIMASRPAGLYYMDYrDEENNHTVYvaaTQCEPTYGRLIFP 176
Cdd:COG0308  74 RDGERLTITLPKPL------------APGETFTLEIEYSGKPSNGGEGLYRSGD-PPDGPPYLY---TQCEPEGARRWFP 137
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 177 CYDEPGFKSNFSIKITHGSSHSAISNMPVKEVLAHGD-LKTTSFHTTPPISTYLVAFVISDFGSISETYR-GITQSIYTS 254
Cdd:COG0308 138 CFDHPDDKATFTLTVTVPAGWVAVSNGNLVSETELGDgRTTWHWADTQPIPTYLFALAAGDYAVVEDTFAsGVPLRVYVR 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 255 PTSKEKGQVALKNAVRTVAALEDYFGVSYPLPKLDHVALKK-NYGAaMENWGLITYKDVNLLKNISSDGQKRKLDLITQn 333
Cdd:COG0308 218 PGLADKAKEAFESTKRMLDFFEELFGVPYPFDKYDQVAVPDfNFGA-MENQGLVTFGEKVLADETATDADYERRESVIA- 295
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 334 HEIAHQWFGNLVSPEWWTYTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMshYVEGEKDIMG 413
Cdd:COG0308 296 HELAHQWFGNLVTCADWDDLWLNEGFATYMEQLFSEDLYGKDAADRIFVGALRSYAFAEDAGPNAHPI--RPDDYPEIEN 373
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 414 VFDIISYKRGACVIKMFHHAFRQKLFVRGISHFLEKYRYSVANELNLFDALHSEL-QDDEYFSHQpwasrireimlsWTH 492
Cdd:COG0308 374 FFDGIVYEKGALVLHMLRTLLGDEAFRAGLRLYFARHAGGNATTEDFLAALEEASgRDLSAFFDQ------------WLY 441
                       490       500       510       520
                ....*....|....*....|....*....|....*....|..
gi 24648784 493 SEWLPILVVTRNYENN---TITFTQRSVHmkDELWWIPINFA 531
Cdd:COG0308 442 QAGLPTLEVEYEYDADgkvTLTLRQTPPR--PHPFHIPLEVG 481
Peptidase_M1 pfam01433
Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ ...
264-464 4.74e-63

Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity.


Pssm-ID: 426262 [Multi-domain]  Cd Length: 219  Bit Score: 212.53  E-value: 4.74e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   264 ALKNAVRTVAALEDYFGVSYPLPKLDHVALKK-NYGAaMENWGLITYKDVNLL--KNISSDGQKRKLDLITQnHEIAHQW 340
Cdd:pfam01433   2 ALEITVKLLEFYEDYFNIPYPLPKYDLVALPDfSAGA-MENWGLITYRETLLLydPGNSSTSDKQRVASVIA-HELAHQW 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   341 FGNLVSPEWWTYTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMSHYVEGEKDIMGVFDIISY 420
Cdd:pfam01433  80 FGNLVTMKWWDDLWLNEGFATYMEYLGTDALFPEWNIWEQFLLDEVQNAMARDALDSSHPITQNVNDPSEIDDIFDAIPY 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 24648784   421 KRGACVIKMFHHAFRQKLFVRGISHFLEKYRYSVANELNLFDAL 464
Cdd:pfam01433 160 EKGASVLRMLETLLGEEVFQKGLRSYLKKFQYGNATTEDLWDAL 203
pepN_strep_liv TIGR02412
aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the ...
159-464 1.71e-39

aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).


Pssm-ID: 274121 [Multi-domain]  Cd Length: 831  Bit Score: 158.03  E-value: 1.71e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   159 VYVAaTQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSHSAISNMPVKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFG 238
Cdd:TIGR02412 118 VYLY-TQFEPADARRVFAVFDQPDLKANFKFSVKAPEDWTVISNSRETDVTPEPADRRWEFPETPKLSTYLTAVAAGPYH 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   239 SISETYRGITQSIYTSPTSKE--KGQVALKNAVRTVAALEDYFGVSYPLPKLDHVALKKNYGAAMENWGLITYKDVNLLK 316
Cdd:TIGR02412 197 SVQDESRSYPLGIYARRSLAQylDADAIFTITRQGLAFFHRKFGYPYPFKKYDQIFVPEFNAGAMENAGCVTFAENFLHR 276
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   317 NISSDGQKRKLdLITQNHEIAHQWFGNLVSPEWWTYTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFF 396
Cdd:TIGR02412 277 AEATRAEKENR-AGVILHEMAHMWFGDLVTMRWWNDLWLNESFAEYMGTLASAEATEYTDAWTTFAAQGKQWAYEADQLP 355
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24648784   397 DVHPMSHYVEGEKDIMGVFDIISYKRGACVIKMFHHAFRQKLFVRGISHFLEKYRYSVANELNLFDAL 464
Cdd:TIGR02412 356 TTHPIVADVADLADALSNFDGITYAKGASVLKQLVAWVGEEAFFAGVNAYFKRHAFGNATLDDLIDSL 423
ERAP1_C pfam11838
ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 ...
569-841 1.46e-24

ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase.


Pssm-ID: 463368 [Multi-domain]  Cd Length: 316  Bit Score: 105.43  E-value: 1.46e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   569 WIMVNKQHTGFYLVRYDTDNLMAIARQLqtNHSVIHPINRLGLFRDLGPLIEHNEIEqVEVVFELLKYLELEEDVLTWNQ 648
Cdd:pfam11838   1 WVKLNADDTGYYRVNYDPESLAALLEQL--LSKVLSPLDRAGLIDDAFALARAGELS-TSDALDLVLAYLNETDYVVWSA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   649 LQDTIECLTRNLHGTSSQSLFNEFVRRLVGPTFRRV-YVEQGVNLAEDGMFRG-ILEIACSADLPECLEYTRRLAKEhii 726
Cdd:pfam11838  78 ALSQLSTLRSLLSADPEYEALKAFLRKLLSPLAEKLgWEAPPGESHLDRQLRAlLLSAACSAGDPECVAEAKKLFDA--- 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   727 dkiyFKDGSDyhaIID-----SVLCMGVRYLSDQDFQRIIDMMQEiDRASVYYDDIIYALRCTQSHRHLLYYLEglmgen 801
Cdd:pfam11838 155 ----WLDGDD---AIPpdlrwAVYCAAVANGGEAEWDALLERYRD-TTSPSEKERALRALAATPDPELLQRALE------ 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 24648784   802 sthMVLSEFE----DLMYLLYIYKSNLASRPVIWQYIERNYKVL 841
Cdd:pfam11838 221 ---LALDSDEvrnqDLRAVIAGLASNPAGRDLAWDFVKENWDAL 261
 
Name Accession Description Interval E-value
M1_APN-Q_like cd09601
Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), ...
38-492 1.02e-159

Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1); This M1 peptidase family includes eukaryotic and bacterial members: the catalytic domains of aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease, preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1, also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP), or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341064 [Multi-domain]  Cd Length: 442  Bit Score: 476.69  E-value: 1.02e-159
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  38 LFYQLHISSDIHKgqLLFSGNATIDVAIRQSTNEIVLHAKNLTdiqITVHRLMAEGSEIVDDLTHTLHPTAALLIIHPIE 117
Cdd:cd09601   1 LHYDLTLTPDLEN--FTFSGSVTITLEVLEPTDTIVLHAKDLT---ITSASLTLKGGSGIIEVTVVTDEETEFLTITLDE 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 118 NyqaFEEGQQYRLEILYTAIMASRPAGLYYMDYRDEENNhTVYVAATQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSH 197
Cdd:cd09601  76 T---LPPGENYTLSIEFTGKLNDDLRGFYRSSYTDEDGE-TRYLAATQFEPTDARRAFPCFDEPAFKATFDITITHPKGY 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 198 SAISNMP-VKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFGSISETY-RGITQSIYTSPTSKEKGQVALKNAVRTVAAL 275
Cdd:cd09601 152 TALSNMPpVESTELEDGWKTTTFETTPPMSTYLVAFVVGDFEYIESTTkSGVPVRVYARPGKIEQGDFALEVAPKILDFY 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 276 EDYFGVSYPLPKLDHVALKKNYGAAMENWGLITYKDVNLL--KNISSDGQKRKL-DLITqnHEIAHQWFGNLVSPEWWTY 352
Cdd:cd09601 232 EDYFGIPYPLPKLDLVAIPDFAAGAMENWGLITYRETALLydPKTSSASDKQRVaEVIA--HELAHQWFGNLVTMKWWDD 309
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 353 TWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMSHYVEGEKDIMGVFDIISYKRGACVIKMFHH 432
Cdd:cd09601 310 LWLNEGFATYMEYLAVDKLFPEWNMWDQFVVDELQSALELDSLASSHPIEVPVESPSEISEIFDAISYSKGASVLRMLEN 389
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 433 AFRQKLFVRGISHFLEKYRYSVANELNLFDALHSELQDDEYFShqpwasrIREIMLSWTH 492
Cdd:cd09601 390 FLGEEVFRKGLRKYLKKHAYGNATTDDLWEALQEASGESKPLD-------VKEIMDSWTL 442
PepN COG0308
Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];
22-531 2.00e-86

Aminopeptidase N, contains DUF3458 domain [Amino acid transport and metabolism];


Pssm-ID: 440077 [Multi-domain]  Cd Length: 609  Bit Score: 289.62  E-value: 2.00e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  22 MGERERSLRLPNATY-PLFYQLHIssDIHKGQLLFSGNATIDV-AIRQSTNEIVLHAKNLTdiqitVHRLMAEGSEI--- 96
Cdd:COG0308   1 MKRLTRLEAYRPPGYdVTHYDLDL--DLDPATTRLSGTATITFtATEAPLDSLVLDLKGLE-----VTSVTVDGKPLdft 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  97 VDDLTHTLHPTAALliihpienyqafEEGQQYRLEILYTAIMASRPAGLYYMDYrDEENNHTVYvaaTQCEPTYGRLIFP 176
Cdd:COG0308  74 RDGERLTITLPKPL------------APGETFTLEIEYSGKPSNGGEGLYRSGD-PPDGPPYLY---TQCEPEGARRWFP 137
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 177 CYDEPGFKSNFSIKITHGSSHSAISNMPVKEVLAHGD-LKTTSFHTTPPISTYLVAFVISDFGSISETYR-GITQSIYTS 254
Cdd:COG0308 138 CFDHPDDKATFTLTVTVPAGWVAVSNGNLVSETELGDgRTTWHWADTQPIPTYLFALAAGDYAVVEDTFAsGVPLRVYVR 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 255 PTSKEKGQVALKNAVRTVAALEDYFGVSYPLPKLDHVALKK-NYGAaMENWGLITYKDVNLLKNISSDGQKRKLDLITQn 333
Cdd:COG0308 218 PGLADKAKEAFESTKRMLDFFEELFGVPYPFDKYDQVAVPDfNFGA-MENQGLVTFGEKVLADETATDADYERRESVIA- 295
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 334 HEIAHQWFGNLVSPEWWTYTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMshYVEGEKDIMG 413
Cdd:COG0308 296 HELAHQWFGNLVTCADWDDLWLNEGFATYMEQLFSEDLYGKDAADRIFVGALRSYAFAEDAGPNAHPI--RPDDYPEIEN 373
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 414 VFDIISYKRGACVIKMFHHAFRQKLFVRGISHFLEKYRYSVANELNLFDALHSEL-QDDEYFSHQpwasrireimlsWTH 492
Cdd:COG0308 374 FFDGIVYEKGALVLHMLRTLLGDEAFRAGLRLYFARHAGGNATTEDFLAALEEASgRDLSAFFDQ------------WLY 441
                       490       500       510       520
                ....*....|....*....|....*....|....*....|..
gi 24648784 493 SEWLPILVVTRNYENN---TITFTQRSVHmkDELWWIPINFA 531
Cdd:COG0308 442 QAGLPTLEVEYEYDADgkvTLTLRQTPPR--PHPFHIPLEVG 481
M1 cd09595
Peptidase M1 family includes the catalytic domains of aminopeptidase N and leukotriene A4 ...
40-466 1.58e-76

Peptidase M1 family includes the catalytic domains of aminopeptidase N and leukotriene A4 hydrolase; The model represents the catalytic domains of M1 peptidase family members including aminopeptidase N (APN) and leukotriene A4 hydrolase (LTA4H). All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile upon activation during catalysis. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types. APN expression is dysregulated in many inflammatory diseases and is enhanced in numerous tumor cells, making it a lead target in the development of anti-cancer and anti-inflammatory drugs. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity. The two activities occupy different, but overlapping sites. The activity and physiological relevance of the aminopeptidase in LTA4H is as yet unknown, while the epoxide hydrolase converts leukotriene A4 (LTA4) into leukotriene B4 (LTB4), a potent chemotaxin that is fundamental to the inflammatory response of mammals.


Pssm-ID: 341058 [Multi-domain]  Cd Length: 413  Bit Score: 256.60  E-value: 1.58e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  40 YQLHISSDIHKGQLLFSGNATIDVAIRQSTNEIVLHAKNLTdiqitVHRLMAEGSEIV-DDLTHTLHPTAALLIIHPien 118
Cdd:cd09595   1 YHYDLDLDVDFTTKTLNGTETLTVDASQVGRELVLDLVGLT-----IHSVSVNGAAVDfGEREHYDGEKLTIPGPKP--- 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 119 yqafeEGQQYRLEILYTAIMASRPAGLYYMDYRDEENNhtvyVAATQCEPTYGRLIFPCYDEPGFKSNFSIKI-THGSSH 197
Cdd:cd09595  73 -----PGQTFTVRISFEAKPSKNLLGWLWEQTAGKEKP----YLFTQFEATHARRIFPCIDHPAVKATFTVTItTPKKDL 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 198 SAISNMPVKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFGSISETYR---GITQSIYTSPTSKEKGQVALKNAVRTVAA 274
Cdd:cd09595 144 LASNGALVGEETGANGRKTYRFEDTPPIPTYLVAVVVGDLEFKYVTVKsqpRVGLSVYSEPLQVDQAQYAFDATRAALAW 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 275 LEDYFGVSYPLPKLDHVALKKNYGAAMENWGLITYKDVNLLKNISSDGQKRKLDLITQnHEIAHQWFGNLVSPEWWTYTW 354
Cdd:cd09595 224 FEDYFGGPYPLPKYDLLAVPDFNSGAMENPGLITFRTTYLLRSKVTDTGARSIENVIA-HELAHQWFGNLVTMRWWNDLW 302
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 355 MNEGFATYFSYVITDLIYPNDKMMDMFMTHeADSAYSYNSFFDVHPMSHYVEGEKDIMGVFDIISYKRGACVIKMFHHAF 434
Cdd:cd09595 303 LNEGFAVYYENRIMDATFGTSSRHLDQLSG-SSDLNTEQLLEDSSPTSTPVRSPADPDVAYDGVTYAKGALVLRMLEELV 381
                       410       420       430
                ....*....|....*....|....*....|..
gi 24648784 435 RQKLFVRGISHFLEKYRYSVANELNLFDALHS 466
Cdd:cd09595 382 GEEAFDKGVQAYFNRHKFKNATTDDFIDALEE 413
Peptidase_M1 pfam01433
Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ ...
264-464 4.74e-63

Peptidase family M1 domain; Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity.


Pssm-ID: 426262 [Multi-domain]  Cd Length: 219  Bit Score: 212.53  E-value: 4.74e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   264 ALKNAVRTVAALEDYFGVSYPLPKLDHVALKK-NYGAaMENWGLITYKDVNLL--KNISSDGQKRKLDLITQnHEIAHQW 340
Cdd:pfam01433   2 ALEITVKLLEFYEDYFNIPYPLPKYDLVALPDfSAGA-MENWGLITYRETLLLydPGNSSTSDKQRVASVIA-HELAHQW 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   341 FGNLVSPEWWTYTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMSHYVEGEKDIMGVFDIISY 420
Cdd:pfam01433  80 FGNLVTMKWWDDLWLNEGFATYMEYLGTDALFPEWNIWEQFLLDEVQNAMARDALDSSHPITQNVNDPSEIDDIFDAIPY 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 24648784   421 KRGACVIKMFHHAFRQKLFVRGISHFLEKYRYSVANELNLFDAL 464
Cdd:pfam01433 160 EKGASVLRMLETLLGEEVFQKGLRSYLKKFQYGNATTEDLWDAL 203
M1_APN_like cd09603
Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains mostly ...
38-456 2.04e-62

Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341066 [Multi-domain]  Cd Length: 410  Bit Score: 217.45  E-value: 2.04e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  38 LFYQLHISSDIHKGQLlfSGNATIDVAIRQSTNEIVLHAKNLTDIQITVHrlmaegSEIVDDLTHTLHptaaLLIIHPIE 117
Cdd:cd09603   4 LHYDLDLDYDPATKSL--SGTATITFRATQDLDSLQLDLVGLTVSSVTVD------GVPAAFFTHDGD----KLVITLPR 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 118 NYQAfeeGQQYRLEILYTAimasRPAGLYYMDYRDEENNHTVYVAATQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSH 197
Cdd:cd09603  72 PLAA---GETFTVTVRYSG----KPRPAGYPPGDGGGWEEGDDGVWTAGQPEGASTWFPCNDHPDDKATYDITVTVPAGL 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 198 SAISN-MPVKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFGSISE-TYRGITQSIYTSPTSKEKGQVALKNAVRTVAAL 275
Cdd:cd09603 145 TVVSNgRLVSTTTNGGGTTTWHWKMDYPIATYLVTLAVGRYAVVEDgSGGGIPLRYYVPPGDAAKAKASFARTPEMLDFF 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 276 EDYFGvSYPLPKLDHVALKKNYGAaMENWGLITYKDVNLLKNISSDGqkrkldLITqnHEIAHQWFGNLVSPEWWTYTWM 355
Cdd:cd09603 225 EELFG-PYPFEKYGQVVVPDLGGG-MEHQTATTYGNNFLNGDRGSER------LIA--HELAHQWFGDSVTCADWADIWL 294
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 356 NEGFATYFSYVITDLIYPNDKMMDmfmtheadsaYSYNSFFDVHPMSHYVEGEKDIMGVFDIISYKRGACVIkmfhHAFR 435
Cdd:cd09603 295 NEGFATYAEWLWSEHKGGADAYRA----------YLAGQRQDYLNADPGPGRPPDPDDLFDRDVYQKGALVL----HMLR 360
                       410       420
                ....*....|....*....|....*
gi 24648784 436 QKL----FVRGISHFLEKYRYSVAN 456
Cdd:cd09603 361 NLLgdeaFFAALRAYLARYAHGNVT 385
M1_APN cd09602
Peptidase M1 family including aminopeptidase N catalytic domain; This model represents the ...
40-466 9.10e-62

Peptidase M1 family including aminopeptidase N catalytic domain; This model represents the catalytic domain of bacterial and eukaryotic aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341065 [Multi-domain]  Cd Length: 440  Bit Score: 216.61  E-value: 9.10e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  40 YQLHIssDIHKGQLLFSGNATIDVAIRQSTNEIVLhaknltDIQI-TVHRLMAEGSEIVDDLTHTLHptaalLIIHpien 118
Cdd:cd09602  18 YDLDL--DLTEGAETFRGTVTIRFTLREPGASLFL------DFRGgEVKSVTLNGRPLDPSAFDGER-----ITLP---- 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 119 yQAFEEGQQyRLEILYTAIMASRPAGLYYmdYRDEENNHT-VYvaaTQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSH 197
Cdd:cd09602  81 -GLLKAGEN-TVVVEFTAPYSSDGEGLHR--FVDPADGETyLY---TLFEPDDARRVFPCFDQPDLKATFTLTVTAPADW 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 198 SAISNMPVKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFGSISETYRGITQSIYTSPTSKEKgQVALKNAVRTVAA--- 274
Cdd:cd09602 154 TVISNGPETSTEEAGGRKRWRFAETPPLSTYLFAFVAGPYHRVEDEHDGIPLGLYCRESLAEY-ERDADEIFEVTKQgld 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 275 -LEDYFGVSYPLPKLDHVALKK-NYGaAMENWGLITYKDVNLLKNISSDGQKRKL-DLITqnHEIAHQWFGNLVSPEWWT 351
Cdd:cd09602 233 fYEDYFGIPYPFGKYDQVFVPEfNFG-AMENPGAVTFRESYLFREEPTRAQRLRRaNTIL--HEMAHMWFGDLVTMKWWD 309
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 352 YTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYnsffDVHPMSHYVEGE----KDIMGVFDIISYKRGACVI 427
Cdd:cd09602 310 DLWLNESFADFMAAKALAEATPFTDAWLTFLLRRKPWAYRA----DQLPTTHPIAQDvpdlEAAGSNFDGITYAKGASVL 385
                       410       420       430
                ....*....|....*....|....*....|....*....
gi 24648784 428 KMFHHAFRQKLFVRGISHFLEKYRYSVANELNLFDALHS 466
Cdd:cd09602 386 KQLVALVGEEAFRAGLREYFKKHAYGNATLDDLIAALDE 424
Peptidase_M1_N pfam17900
Peptidase M1 N-terminal domain; This domain is found at the N-terminus of aminopeptidases from ...
37-229 4.33e-42

Peptidase M1 N-terminal domain; This domain is found at the N-terminus of aminopeptidases from the M1 family.


Pssm-ID: 465557 [Multi-domain]  Cd Length: 186  Bit Score: 152.11  E-value: 4.33e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784    37 PLFYQLHISSDIHkgQLLFSGNATIDVAIRQSTNEIVLHAKnltDIQITVHRLMAEGSEIVDDLTHT-LHPTAALLIIHP 115
Cdd:pfam17900   2 PEHYDLDLKIDLK--NFTFSGSVTITLQLNNATNVIVLHAS---DLTIRSISLSDEVTSDGVPADFTeDQKDGEKLTIVL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   116 IENYQAfeeGQQYRLEILYTAIMASRPAGLYYMDYrdEENNHTVYVAATQCEPTYGRLIFPCYDEPGFKSNFSIKITHGS 195
Cdd:pfam17900  77 PETLNQ---TGPYTLEIEYSGELNDSMTGFYRSTY--TDNGEKKVLVTTQFEPTDARSAFPCFDEPSVKATFTISIIHPK 151
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 24648784   196 SHSAISNMPVKEVLAHGD-LKTTSFHTTPPISTYL 229
Cdd:pfam17900 152 DYTALSNMPVIASEPLENgWVITTFEQTPKMSTYL 186
pepN_strep_liv TIGR02412
aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the ...
159-464 1.71e-39

aminopeptidase N, Streptomyces lividans type; This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).


Pssm-ID: 274121 [Multi-domain]  Cd Length: 831  Bit Score: 158.03  E-value: 1.71e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   159 VYVAaTQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSHSAISNMPVKEVLAHGDLKTTSFHTTPPISTYLVAFVISDFG 238
Cdd:TIGR02412 118 VYLY-TQFEPADARRVFAVFDQPDLKANFKFSVKAPEDWTVISNSRETDVTPEPADRRWEFPETPKLSTYLTAVAAGPYH 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   239 SISETYRGITQSIYTSPTSKE--KGQVALKNAVRTVAALEDYFGVSYPLPKLDHVALKKNYGAAMENWGLITYKDVNLLK 316
Cdd:TIGR02412 197 SVQDESRSYPLGIYARRSLAQylDADAIFTITRQGLAFFHRKFGYPYPFKKYDQIFVPEFNAGAMENAGCVTFAENFLHR 276
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   317 NISSDGQKRKLdLITQNHEIAHQWFGNLVSPEWWTYTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFF 396
Cdd:TIGR02412 277 AEATRAEKENR-AGVILHEMAHMWFGDLVTMRWWNDLWLNESFAEYMGTLASAEATEYTDAWTTFAAQGKQWAYEADQLP 355
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24648784   397 DVHPMSHYVEGEKDIMGVFDIISYKRGACVIKMFHHAFRQKLFVRGISHFLEKYRYSVANELNLFDAL 464
Cdd:TIGR02412 356 TTHPIVADVADLADALSNFDGITYAKGASVLKQLVAWVGEEAFFAGVNAYFKRHAFGNATLDDLIDSL 423
ERAP1_C pfam11838
ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 ...
569-841 1.46e-24

ERAP1-like C-terminal domain; This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase.


Pssm-ID: 463368 [Multi-domain]  Cd Length: 316  Bit Score: 105.43  E-value: 1.46e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   569 WIMVNKQHTGFYLVRYDTDNLMAIARQLqtNHSVIHPINRLGLFRDLGPLIEHNEIEqVEVVFELLKYLELEEDVLTWNQ 648
Cdd:pfam11838   1 WVKLNADDTGYYRVNYDPESLAALLEQL--LSKVLSPLDRAGLIDDAFALARAGELS-TSDALDLVLAYLNETDYVVWSA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   649 LQDTIECLTRNLHGTSSQSLFNEFVRRLVGPTFRRV-YVEQGVNLAEDGMFRG-ILEIACSADLPECLEYTRRLAKEhii 726
Cdd:pfam11838  78 ALSQLSTLRSLLSADPEYEALKAFLRKLLSPLAEKLgWEAPPGESHLDRQLRAlLLSAACSAGDPECVAEAKKLFDA--- 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   727 dkiyFKDGSDyhaIID-----SVLCMGVRYLSDQDFQRIIDMMQEiDRASVYYDDIIYALRCTQSHRHLLYYLEglmgen 801
Cdd:pfam11838 155 ----WLDGDD---AIPpdlrwAVYCAAVANGGEAEWDALLERYRD-TTSPSEKERALRALAATPDPELLQRALE------ 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 24648784   802 sthMVLSEFE----DLMYLLYIYKSNLASRPVIWQYIERNYKVL 841
Cdd:pfam11838 221 ---LALDSDEvrnqDLRAVIAGLASNPAGRDLAWDFVKENWDAL 261
M1_LTA4H cd09599
Peptidase M1 family including Leukotriene A4 hydrolase catalytic domain; This model represents ...
56-372 4.75e-24

Peptidase M1 family including Leukotriene A4 hydrolase catalytic domain; This model represents the N-terminal catalytic domain of leukotriene A4 hydrolase (LTA4H; E.C. 3.3.2.6) and the close homolog cold-active aminopeptidase (Colwellia psychrerythraea-type peptidase; ColAP), both members of the aminopeptidase M1 family. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity. The two activities occupy different, but overlapping sites. The activity and physiological relevance of the aminopeptidase is poorly understood while the epoxide hydrolase converts leukotriene A4 (LTA4) into leukotriene B4 (LTB4), a potent chemotaxin that is fundamental to the inflammatory response of mammals. It accepts a variety of substrates, including some opioid, di- and tripeptides, as well as chromogenic aminoacyl-p-nitroanilide derivatives. The aminopeptidase activity of LTA4H is possibly involved in the processing of peptides related to inflammation and host defense. Kinetic analysis shows that LTA4H hydrolyzes arginyl tripeptides with high efficiency and specificity, indicating its function as an arginyl aminopeptidase. Thermodynamic characterization using different biophysical methods shows that structurally distinct inhibitors of the LTA4H occupy different regions of the binding site; while some (RB202, ARM1 and SC57461A) bind to the hydrophobic hydrolase side, both bestatin and captopril are located at the hydrophilic peptidase side. LTB4H overexpression is associated with different pathological conditions and diseases such as cystic fibrosis, coronary heart disease, sepsis, shock, connective tissue disease, and chronic obstructive pulmonary disease. It is also overexpressed in certain human cancers, and has been identified as a functionally important target for mediating anticancer properties of resveratrol, a well-known red wine polyphenolic compound with cancer chemopreventive activity.


Pssm-ID: 341062 [Multi-domain]  Cd Length: 442  Bit Score: 106.39  E-value: 4.75e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  56 SGNATIDV-AIRQSTNEIVLHAKNLTdiqitVHRLMAEGSEivdDLTHTLHPT-----AALLIIHPienyQAFEEGQQYR 129
Cdd:cd09599  30 SGSATLTLeVLQDGADELVLDTRDLD-----ISSVTVNGGK---ELKFELGPRdpvlgSALTITLP----SPLAKGDTFK 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 130 LEILYTAIMASRpaGLYYMD----------YrdeennhtVYvaaTQCEPTYGRLIFPCYDEPGFKSNFSIKITHGSSHSA 199
Cdd:cd09599  98 VKIEYSTTPQAT--ALQWLTpeqtagkkhpY--------LF---TQCQAIHARSLFPCQDTPSVKSTYSATVTVPKGLTA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 200 I-SNMPVKEVlAHGDLKTTSFHTTPPISTYLVAFVISD--FGSISE-TYrgitqsIYTSPTSKEKGQVALKNAVRTVAAL 275
Cdd:cd09599 165 LmSALRTGEK-EEAGTGTYTFEQPVPIPSYLIAIAVGDleSREIGPrSG------VWAEPSVVDAAAEEFADTEKFLKAA 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 276 EDYFG----------V---SYPlpkldhvalkknYGaAMENwGLITYkdVN--LLKnissdGQKRKLDLITqnHEIAHQW 340
Cdd:cd09599 238 EKLYGpyvwgrydllVlppSFP------------YG-GMEN-PCLTF--ATptLIA-----GDRSLVDVIA--HEIAHSW 294
                       330       340       350
                ....*....|....*....|....*....|..
gi 24648784 341 FGNLVSPEWWTYTWMNEGFATYFSYVITDLIY 372
Cdd:cd09599 295 SGNLVTNANWEHFWLNEGFTVYLERRILERLY 326
leuko_A4_hydro TIGR02411
leukotriene A-4 hydrolase/aminopeptidase; Members of this family represent a distinctive ...
42-547 1.44e-23

leukotriene A-4 hydrolase/aminopeptidase; Members of this family represent a distinctive subset within the zinc metallopeptidase family M1 (pfam01433). The majority of the members of pfam01433 are aminopeptidases, but the sequences in this family for which the function is known are leukotriene A-4 hydrolase. A dual epoxide hydrolase and aminopeptidase activity at the same active site is indicated. The physiological substrate for aminopeptidase activity is not known.


Pssm-ID: 274120 [Multi-domain]  Cd Length: 602  Bit Score: 106.40  E-value: 1.44e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784    42 LHISSDIHKGQLlfSGNATIDV-AIRQSTNEIVLHAKNLTDIQITVHRLMA--EGSEIVDDLTHTLHptaalliihpIEN 118
Cdd:TIGR02411  18 LNLSVDFTKRKL--SGSVTFTLkSLTDNLNKLVLDTSYLDIQKVTINGLPAdfAIGERKEPLGSPLT----------ISL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   119 YQAFEEGQQYRLEILYTAimASRPAGLYYMDYRDEENNHTVYVAaTQCEPTYGRLIFPCYDEPGFKSNFSIKITHgsSHS 198
Cdd:TIGR02411  86 PIATSKNDEFVLNISFST--TPKCTALQWLNPEQTSGKKHPYLF-SQCQAIHARSLFPCQDTPSVKSTYTAEVES--PLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   199 AI-SNMPVKEvlAHGDLKTTSFHTTPPISTYLVAFVISDFGSiseTYRGITQSIYTSPTSKEKGQVALKNAVRTVAALED 277
Cdd:TIGR02411 161 VLmSGIRDGE--TSNDPGKYLFKQKVPIPAYLIAIASGDLAS---APIGPRSTVYSEPEQLEKCQYEFENDTEKFIKTAE 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   278 YFGVSYPLPKLDHVALKKN--YGAaMENwGLITYKDVNLLKnissdGQKRKLDLITqnHEIAHQWFGNLVSPEWWTYTWM 355
Cdd:TIGR02411 236 DLIFPYEWGQYDLLVLPPSfpYGG-MEN-PNLTFATPTLIA-----GDRSNVDVIA--HELAHSWSGNLVTNCSWEHFWL 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   356 NEGFATYFSYVITDLIYPNDKMMDMFMTHEADSAYSYNSFFDVHPMSHYVEGEKDIM--GVFDIISYKRGACVIKMFHHA 433
Cdd:TIGR02411 307 NEGWTVYLERRIIGRLYGEKTRHFSALIGWGDLQESVKTLGETPEFTKLVVDLKDNDpdDAFSSVPYEKGFNFLFYLEQL 386
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784   434 F-RQKLFVRGISHFLEKYRYSVANELNLFDALHselqddEYFSHQPWASRIREI-MLSWTHSEWLPilVVTRNYE----N 507
Cdd:TIGR02411 387 LgGPAEFDPFLRHYFKKFAYKSLDTYQFKDALY------EYFKDKKKVDKLDAVdWETWLYSPGMP--PVKPNFDttlaD 458
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|
gi 24648784   508 NTITFTQRSVHMKDELWwiPINFATTQSPNFEDTQVDMFM 547
Cdd:TIGR02411 459 ECYALADRWVDAAKADD--LSSFNAKDIKDFSSHQLVLFL 496
M1_APN_like cd09604
Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains ...
231-474 1.14e-16

Peptidase M1 family similar to aminopeptidase N catalytic domain; This family contains bacterial M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341067 [Multi-domain]  Cd Length: 440  Bit Score: 83.86  E-value: 1.14e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 231 AFVIS-DFGSISETYRGITQSIYTSPTSKEKGQVALKNAVRTVAALEDYFGvSYPLPKLDhVALKKNYGAAMENWGLITY 309
Cdd:cd09604 205 AWAASpDFVVDAATVDGVTVNVYYLPENAEAAERALEYAKDALEFFSEKFG-PYPYPELD-VVQGPFGGGGMEYPGLVFI 282
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 310 kdvnllkNISSDGQKRKLDLITqNHEIAHQWFGNLVSPEWWTYTWMNEGFATYFSYVITDLIYPNDKMMDMFMTHEADSA 389
Cdd:cd09604 283 -------GSRLYDPKRSLEGVV-VHEIAHQWFYGIVGNDERREPWLDEGLATYAESLYLEEKYGKEAADELLGRRYYRAY 354
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 390 YSYNSFFDVHPMSHYVEGEKDimgvfDIISYKRGAcvikMFHHAFRQKL----FVRGISHFLEKYRYSVANELNLFDAL- 464
Cdd:cd09604 355 ARGPGGPINLPLDTFPDGSYY-----SNAVYSKGA----LFLEELREELgdeaFDKALREYYRRYKFKHPTPEDFFRTAe 425
                       250
                ....*....|.
gi 24648784 465 -HSELQDDEYF 474
Cdd:cd09604 426 eVSGKDLDWFF 436
M1_APN cd09600
Peptidase M1 family, including aminopeptidase N catalytic domain; This model represents the ...
67-450 5.27e-10

Peptidase M1 family, including aminopeptidase N catalytic domain; This model represents the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. It includes bacterial-type alanyl aminopeptidases as well as PfA-M1 aminopeptidase (Plasmodium falciparum-type). APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.


Pssm-ID: 341063 [Multi-domain]  Cd Length: 434  Bit Score: 62.92  E-value: 5.27e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784  67 QSTNEIVLHAKNLTDIQITVH-RLMAEGSEIVDDLTHTLH--PTAALL----IIHPIENYQafeegqqyrLEILYTAima 139
Cdd:cd09600  38 GEGAPLVLDGEDLELLSVKIDgKPLSPSDYTLDEEGLTIKnvPDRFVLeievRINPAANTS---------LEGLYKS--- 105
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 140 srpAGLYYmdyrdeennhtvyvaaTQCEPTYGRLI--FPcyDEPGFKSNFSIKITHGSSHSAI--SNmpvKEVLAHGDLK 215
Cdd:cd09600 106 ---GGILC----------------TQCEAEGFRRItyFP--DRPDVMSKFTVTIEADKEKYPVllSN---GNLIEEGELP 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 216 T----TSFHTTPPISTYLVAFVISDFGSISETY-----RGITQSIYTSPTSKEKGQVA---LKNAVRTVaalEDYFGVSY 283
Cdd:cd09600 162 NgrhfAVWEDPFPKPSYLFALVAGDLGSVEDTFttksgRKVKLRIYVEPGNEDKCHHAmesLKKAMKWD---EERFGLEY 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 284 PLPKLDHVALKK-NYGAaMENWGLITYKDVNLL--KNISSDGqkrklDLI----TQNHEIAHQWFGNLVSPEWWTYTWMN 356
Cdd:cd09600 239 DLDLFNIVAVDDfNMGA-MENKGLNIFNSKYVLadPETATDA-----DYEriesVIAHEYFHNWTGNRVTCRDWFQLSLK 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24648784 357 EGFATY----FSYvitDLIYPNDKMMDmfmtheaDSAYSYNSFF--DVHPMSH------YVEgekdiMGVF-DIISYKRG 423
Cdd:cd09600 313 EGLTVFrdqeFSA---DMNSRAVKRIE-------DVRRLRSAQFpeDAGPMAHpirpdsYIE-----INNFyTVTVYEKG 377
                       410       420
                ....*....|....*....|....*..
gi 24648784 424 ACVIKMFHHAFRQKLFVRGISHFLEKY 450
Cdd:cd09600 378 AEVIRMLHTLLGEEGFRKGMDLYFERH 404
GluZincin cd09594
Gluzincin Peptidase family (thermolysin-like proteinases, TLPs) which includes peptidases M1, ...
296-367 8.65e-03

Gluzincin Peptidase family (thermolysin-like proteinases, TLPs) which includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins); The Gluzincin family (thermolysin-like peptidases or TLPs) includes several zinc-dependent metallopeptidases such as M1, M2, M3, M4, M13, M32, M36 peptidases (MEROPS classification), which contain the HEXXH motif as part of their active site. Peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The M1 family includes aminopeptidase N (APN) and leukotriene A4 hydrolase (LTA4H). APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity such that the two activities occupy different, but overlapping sites. The M3_like peptidases include the M2_ACE, M3 or neurolysin-like family (subfamilies M3B_PepF and M3A) and M32_Taq peptidases. The M2 peptidase angiotensin converting enzyme (ACE, EC 3.4.15.1) catalyzes the conversion of decapeptide angiotensin I to the potent vasopressor octapeptide angiotensin II. ACE is a key component of the renin-angiotensin system that regulates blood pressure, thus ACE inhibitors are important for the treatment of hypertension. M3A includes thimet oligopeptidase (TOP; endopeptidase 3.4.24.15), neurolysin (3.4.24.16), and the mitochondrial intermediate peptidase; and M3B includes oligopeptidase F. The M32 family includes eukaryotic enzymes from protozoa Trypanosoma cruzi, a causative agent of Chagas' disease, and from Leishmania major, a parasite that causes leishmaniasis, making these enzymes attractive targets for drug development. The M4 family includes secreted protease thermolysin (EC 3.4.24.27), pseudolysin, aureolysin, and neutral protease as well as bacillolysin (EC 3.4.24.28) that degrade extracellular proteins and peptides for bacterial nutrition, especially prior to sporulation. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing as well as in production of the artificial sweetener aspartame. The M13 family includes neprilysin (EC 3.4.24.11) and endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), which fulfill a broad range of physiological roles due to the greater variation in the S2' subsite allowing substrate specificity and are prime therapeutic targets for selective inhibition. The peptidase M36 fungalysin family includes endopeptidases from pathogenic fungi. Fungalysin hydrolyzes extracellular matrix proteins such as elastin and keratin. Aspergillus fumigatus causes the pulmonary disease aspergillosis by invading the lungs of immuno-compromised animals and secreting fungalysin that possibly breaks down proteinaceous structural barriers.


Pssm-ID: 341057 [Multi-domain]  Cd Length: 105  Bit Score: 37.08  E-value: 8.65e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24648784 296 NYGAAMENWGLITYKDVNLLKNISSDGqkrklDLITqnHEIAHQWFGNLVSPEW-WTYTWMNEGFATYFSYVI 367
Cdd:cd09594  40 NAYNAMWIPSTNIFYGAGILDTLSGTI-----DVLA--HELTHAFTGQFSNLMYsWSSGWLNEGISDYFGGLV 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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