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Conserved domains on  [gi|24762726|ref|NP_611962|]
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uncharacterized protein Dmel_CG3880 [Drosophila melanogaster]

Protein Classification

Suppressor_APC domain-containing protein( domain architecture ID 10568565)

Suppressor_APC domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Suppressor_APC pfam11414
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has ...
 234-314 5.09e-30

Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has a nuclear export activity as well as many different intracellular functions. The structure consists of three alpha-helices forming two separate antiparallel coiled coils.


:

Pssm-ID: 463275  Cd Length: 82  Bit Score: 110.81  E-value: 5.09e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24762726   234 DYNMLKRLKQLEEQRELLLFGLDGVEKARDWYMMQVLNVQEQIKYFGRLGTRFDQWSELQQERLNFQRARVFEANRSLQI 313
Cdd:pfam11414   1 DYNMLKRMKQLEQEKDVLLQGLEMVERARDWYQQQLQEVQERQKYLGANGTYFDYGSDAQQERLEFLLARIQEVNRCLGG 80


                  .
gi 24762726   314 L 314
Cdd:pfam11414  81 L 81
 
Name Accession Description Interval E-value
Suppressor_APC pfam11414
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has ...
 234-314 5.09e-30

Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has a nuclear export activity as well as many different intracellular functions. The structure consists of three alpha-helices forming two separate antiparallel coiled coils.


Pssm-ID: 463275  Cd Length: 82  Bit Score: 110.81  E-value: 5.09e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24762726   234 DYNMLKRLKQLEEQRELLLFGLDGVEKARDWYMMQVLNVQEQIKYFGRLGTRFDQWSELQQERLNFQRARVFEANRSLQI 313
Cdd:pfam11414   1 DYNMLKRMKQLEQEKDVLLQGLEMVERARDWYQQQLQEVQERQKYLGANGTYFDYGSDAQQERLEFLLARIQEVNRCLGG 80


                  .
gi 24762726   314 L 314
Cdd:pfam11414  81 L 81
 
Name Accession Description Interval E-value
Suppressor_APC pfam11414
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has ...
 234-314 5.09e-30

Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has a nuclear export activity as well as many different intracellular functions. The structure consists of three alpha-helices forming two separate antiparallel coiled coils.


Pssm-ID: 463275  Cd Length: 82  Bit Score: 110.81  E-value: 5.09e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24762726   234 DYNMLKRLKQLEEQRELLLFGLDGVEKARDWYMMQVLNVQEQIKYFGRLGTRFDQWSELQQERLNFQRARVFEANRSLQI 313
Cdd:pfam11414   1 DYNMLKRMKQLEQEKDVLLQGLEMVERARDWYQQQLQEVQERQKYLGANGTYFDYGSDAQQERLEFLLARIQEVNRCLGG 80


                  .
gi 24762726   314 L 314
Cdd:pfam11414  81 L 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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