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Conserved domains on  [gi|442624097|ref|NP_611292|]
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uncharacterized protein Dmel_CG5756, isoform C [Drosophila melanogaster]

Protein Classification

chitin binding peritrophin-A domain-containing protein( domain architecture ID 10482828)

chitin binding peritrophin-A domain-containing protein similar to Blomia tropicalis major allergen Blo t 12 and Caenorhabditis elegans chondroitin proteoglycan 1

Gene Ontology:  GO:0008061
PubMed:  33744410|9651363

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 70-126 2.47e-08

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


:

Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 51.26  E-value: 2.47e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 442624097    70 CKGRHEGYYADvESRCQAFRICAHtarsPQGFGFLCPNGTLFSQKNFVCDWYRN-VNC 126
Cdd:pfam01607    1 CAGKEDGYYAD-PGDCSKYYVCSN----GEAVEFTCPNGLVFDPTLGICDYPDNvVDC 53
 
Name Accession Description Interval E-value
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 70-126 2.47e-08

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 51.26  E-value: 2.47e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 442624097    70 CKGRHEGYYADvESRCQAFRICAHtarsPQGFGFLCPNGTLFSQKNFVCDWYRN-VNC 126
Cdd:pfam01607    1 CAGKEDGYYAD-PGDCSKYYVCSN----GEAVEFTCPNGLVFDPTLGICDYPDNvVDC 53
ChtBD2 smart00494
Chitin-binding domain type 2;
68-120 4.93e-05

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 42.05  E-value: 4.93e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 442624097     68 FVCKGRHEGYYADvESRCQAFRICAHTarspQGFGFLCPNGTLFSQKNFVCDW 120
Cdd:smart00494    1 NECPGRGDGLYPH-PTDCSKYYQCSNG----RPIVGSCPAGLVFNPATQTCDW 48
 
Name Accession Description Interval E-value
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 70-126 2.47e-08

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 51.26  E-value: 2.47e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 442624097    70 CKGRHEGYYADvESRCQAFRICAHtarsPQGFGFLCPNGTLFSQKNFVCDWYRN-VNC 126
Cdd:pfam01607    1 CAGKEDGYYAD-PGDCSKYYVCSN----GEAVEFTCPNGLVFDPTLGICDYPDNvVDC 53
ChtBD2 smart00494
Chitin-binding domain type 2;
68-120 4.93e-05

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 42.05  E-value: 4.93e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 442624097     68 FVCKGRHEGYYADvESRCQAFRICAHTarspQGFGFLCPNGTLFSQKNFVCDW 120
Cdd:smart00494    1 NECPGRGDGLYPH-PTDCSKYYQCSNG----RPIVGSCPAGLVFNPATQTCDW 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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