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Conserved domains on  [gi|19920958|ref|NP_609239|]
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mitochondrial ribosomal protein L51 [Drosophila melanogaster]

Protein Classification

MRP-L51 domain-containing protein( domain architecture ID 10563004)

MRP-L51 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MRP-L51 pfam10244
Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S ...
 75-168 3.85e-50

Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S mitochondrial ribosome. It has otherwise been referred to as bMRP-64. The exact function of this family is not known.


:

Pssm-ID: 463021  Cd Length: 93  Bit Score: 156.28  E-value: 3.85e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19920958    75 MPVYRPKNAWSKKRALFGQNDYIDILGNDRLHPVKVLYSLPSWLRGVSGNEYQVLLRKRKLLEKsKYPIARPTKWREMEK 154
Cdd:pfam10244   1 MPKYKPKDRWTEKRALFGQNDYIDILGDGKLHPKDLLYNVPSWLRGVKGNELQRLLRKRKMVGE-TYPRMRPTKWHNLNK 79

                          90
                  ....*....|....
gi 19920958   155 RILYLYKFLNRKTK 168
Cdd:pfam10244  80 RIRYLYKRLNRKTK 93
 
Name Accession Description Interval E-value
MRP-L51 pfam10244
Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S ...
 75-168 3.85e-50

Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S mitochondrial ribosome. It has otherwise been referred to as bMRP-64. The exact function of this family is not known.


Pssm-ID: 463021  Cd Length: 93  Bit Score: 156.28  E-value: 3.85e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19920958    75 MPVYRPKNAWSKKRALFGQNDYIDILGNDRLHPVKVLYSLPSWLRGVSGNEYQVLLRKRKLLEKsKYPIARPTKWREMEK 154
Cdd:pfam10244   1 MPKYKPKDRWTEKRALFGQNDYIDILGDGKLHPKDLLYNVPSWLRGVKGNELQRLLRKRKMVGE-TYPRMRPTKWHNLNK 79

                          90
                  ....*....|....
gi 19920958   155 RILYLYKFLNRKTK 168
Cdd:pfam10244  80 RIRYLYKRLNRKTK 93
 
Name Accession Description Interval E-value
MRP-L51 pfam10244
Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S ...
 75-168 3.85e-50

Mitochondrial ribosomal subunit; MRP-L51 is a family of small proteins from the intact 55 S mitochondrial ribosome. It has otherwise been referred to as bMRP-64. The exact function of this family is not known.


Pssm-ID: 463021  Cd Length: 93  Bit Score: 156.28  E-value: 3.85e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19920958    75 MPVYRPKNAWSKKRALFGQNDYIDILGNDRLHPVKVLYSLPSWLRGVSGNEYQVLLRKRKLLEKsKYPIARPTKWREMEK 154
Cdd:pfam10244   1 MPKYKPKDRWTEKRALFGQNDYIDILGDGKLHPKDLLYNVPSWLRGVKGNELQRLLRKRKMVGE-TYPRMRPTKWHNLNK 79

                          90
                  ....*....|....
gi 19920958   155 RILYLYKFLNRKTK 168
Cdd:pfam10244  80 RIRYLYKRLNRKTK 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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