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Conserved domains on  [gi|24581764|ref|NP_608878|]
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hoepel2 [Drosophila melanogaster]

Protein Classification

ArsB/NhaD family transporter( domain architecture ID 10100037)

ArsB/NhaD family transporter translocates substrates such as sodium, arsenate, sulfate, and organic anions across membranes

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
P_permease cd01116
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ...
350-837 4.00e-153

Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.


:

Pssm-ID: 238536 [Multi-domain]  Cd Length: 413  Bit Score: 454.79  E-value: 4.00e-153
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 350 LLIFYALLVWELFERTFVAMICSILSV-TTLACFNdrPNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFE 428
Cdd:cd01116   1 FIITYALIIFEKVHRTVAALAGALWLViLGLATLS--PDLETIVSWVDWETLALLLGMMIIVSILSETGVFEYLAIWAVK 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 429 ISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTnh 508
Cdd:cd01116  79 ISKGRPWRLLLLLGLLTAFLSAFLDNVTTVLLMVPVTIRLCEVLGLNPVPVLISEVIAANIGGAATLIGDPPNIMIGS-- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 509 fivDNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYHNIDALRLNEPKEmselrremkvwqralnavascskdaqlvrgtl 588
Cdd:cd01116 157 ---AAGLTFNDFLLHMLPSVVLALVVTFILLYFLYRNILKAREEDVLA-------------------------------- 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 589 qakikqlkrtlrrlqkgvgstevytntLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHwrtLPLGWVALLGVIL 668
Cdd:cd01116 202 ---------------------------LAELEPKYPIKDKVLLLKSLTILTLVIIGFVLHSPLG---VSLGWIALLGALL 251
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 669 LLIILNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELTEHVILsvgksHRLAMAIFMILWMSALASSILD 748
Cdd:cd01116 252 LLLLADKLDFEDVLSRVEWDTLLFFAGLFVLVGGLEELGIIEWIAELLVGVIL-----GRIAVAVILILWISALLSAFID 326
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 749 SIPVAAIMVKLVTSLVAkpSLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYKLSFTRYLRTVFPMMLGQ 828
Cdd:cd01116 327 NIPVTATMIPIVKDLAS--QLGIPLLPLWWALALGACLGGNGTLIGASANVVAAGIAEQHGYKISFWEFLKVGFPIMLVS 404

                ....*....
gi 24581764 829 ITLMTVYLL 837
Cdd:cd01116 405 LILATVYLL 413
 
Name Accession Description Interval E-value
P_permease cd01116
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ...
350-837 4.00e-153

Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.


Pssm-ID: 238536 [Multi-domain]  Cd Length: 413  Bit Score: 454.79  E-value: 4.00e-153
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 350 LLIFYALLVWELFERTFVAMICSILSV-TTLACFNdrPNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFE 428
Cdd:cd01116   1 FIITYALIIFEKVHRTVAALAGALWLViLGLATLS--PDLETIVSWVDWETLALLLGMMIIVSILSETGVFEYLAIWAVK 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 429 ISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTnh 508
Cdd:cd01116  79 ISKGRPWRLLLLLGLLTAFLSAFLDNVTTVLLMVPVTIRLCEVLGLNPVPVLISEVIAANIGGAATLIGDPPNIMIGS-- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 509 fivDNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYHNIDALRLNEPKEmselrremkvwqralnavascskdaqlvrgtl 588
Cdd:cd01116 157 ---AAGLTFNDFLLHMLPSVVLALVVTFILLYFLYRNILKAREEDVLA-------------------------------- 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 589 qakikqlkrtlrrlqkgvgstevytntLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHwrtLPLGWVALLGVIL 668
Cdd:cd01116 202 ---------------------------LAELEPKYPIKDKVLLLKSLTILTLVIIGFVLHSPLG---VSLGWIALLGALL 251
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 669 LLIILNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELTEHVILsvgksHRLAMAIFMILWMSALASSILD 748
Cdd:cd01116 252 LLLLADKLDFEDVLSRVEWDTLLFFAGLFVLVGGLEELGIIEWIAELLVGVIL-----GRIAVAVILILWISALLSAFID 326
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 749 SIPVAAIMVKLVTSLVAkpSLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYKLSFTRYLRTVFPMMLGQ 828
Cdd:cd01116 327 NIPVTATMIPIVKDLAS--QLGIPLLPLWWALALGACLGGNGTLIGASANVVAAGIAEQHGYKISFWEFLKVGFPIMLVS 404

                ....*....
gi 24581764 829 ITLMTVYLL 837
Cdd:cd01116 405 LILATVYLL 413
ArsB COG1055
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];
344-841 2.17e-81

Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];


Pssm-ID: 440675 [Multi-domain]  Cd Length: 415  Bit Score: 267.76  E-value: 2.17e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 344 ILAGVILLIFYALLVWELFE--RTFVAMICSILSVTTLACfndrpNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDY 421
Cdd:COG1055   3 ILALAIFVLTYLLIILEPRGlnRAVAALLGAALLLLLGVV-----SLEDALEAIDWNTILFLLGMMIIVAILDESGFFEW 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 422 LAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPIS 501
Cdd:COG1055  78 LAIKLARRAKGSPRRLLWLLGLLTALLSAFLDNDTTALLLTPVVLAIARRLGLNPVPFLIAIVFAANIGGAATPIGNPTN 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 502 IIVSTNhfivdNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYhnidalrlnepkemselRREMKVwqralnavascskda 581
Cdd:COG1055 158 IMIASA-----GGLSFLDFLANLFPPSLVSLLVTLLVLYLLF-----------------RKELPA--------------- 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 582 qlvrgtlqakikqlkrtlrrlqkgvgstevytNTLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHwrtLPLGWV 661
Cdd:COG1055 201 --------------------------------APDLEDDPKEAIKDRRLLRISLLVLALLLVGFVLHSFLG---LPPALI 245
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 662 ALLGVILLLIIlNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELTEHVIlsvgkSHRLAMAIFMILWMSA 741
Cdd:COG1055 246 ALLGAAVLLLL-ARVDVREVLKKVDWSTLLFFIGLFVVVGGLENTGLLDLLAELLASLT-----GGNLLLAALLILWLSA 319
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 742 LASSILDSIPVAAIMVKLVTSLvakpSLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYKLSFTRYLRTV 821
Cdd:COG1055 320 ILSAVVDNVPLVAALLPLIPDL----GATGNPEPLWLALALGATLGGNLTPIGSAANVIVLGIAEKKGIKISFGEFLKVG 395
                       490       500
                ....*....|....*....|
gi 24581764 822 FPMMLGQITLMTVYLLVAHV 841
Cdd:COG1055 396 LPLTLLTLLIALLYLLLLYF 415
CitMHS pfam03600
Citrate transporter;
354-783 4.60e-65

Citrate transporter;


Pssm-ID: 460985 [Multi-domain]  Cd Length: 342  Bit Score: 221.42  E-value: 4.60e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   354 YALLVWELFERTFVAMICSILSVTTLAcfndrPNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFEISGGK 433
Cdd:pfam03600   1 YVLIITEKLPRDVVALLGAVLLVLLGV-----LTPEEALSGIDSPTILLLLGMMIIGAILERTGLFDRLALKLLRLAGGK 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   434 IWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTNHFIvdn 513
Cdd:pfam03600  76 PRRLLVALMLATALLSAFLSNDGTVLIMIPIVLALARRLGLPPSPLLIALAFAANIGGTATPIGDPPNIIIASALGL--- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   514 dvTFPTFVAHTFPGVILAVIQSC-VYLRLFYHNIDALRLNEPKEMSELRremkvwqralnavascskdaqlvrgtlqaki 592
Cdd:pfam03600 153 --SFGDFGFFMFPPVGVALLLVGlLPLLLIFRKLLPVRKEEEAELEELR------------------------------- 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   593 kqlkrtlrrlqkgvgstevytntldelkqKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHWRTLPLgwvallgvillLII 672
Cdd:pfam03600 200 -----------------------------KRAIKDKLLLAISALVLALVILGFLLLSVLALAGALL-----------LLL 239
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   673 LNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELtehvilsVGKSHRLAMAIFMILWMSALASSILDSIPV 752
Cdd:pfam03600 240 TGVLDPEEALKAVDWSTLLFFAGLFILVGALEKTGLADALADA-------LGGLSGLLVALALILWLSALLSAFISNVPT 312
                         410       420       430
                  ....*....|....*....|....*....|.
gi 24581764   753 AAIMVKLVTSLVAKPSLGlPLQPLVWALTLG 783
Cdd:pfam03600 313 AALMAPIIVGMAPAAGLG-DPDPLAWALAVG 342
PLN00136 PLN00136
silicon transporter; Provisional
389-814 2.91e-16

silicon transporter; Provisional


Pssm-ID: 215070 [Multi-domain]  Cd Length: 482  Bit Score: 82.35  E-value: 2.91e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  389 DEIIQWMDMELLTLLFCMMLLILILTETGVFDYLA-VFCFEISGGKiwPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIR 467
Cdd:PLN00136  55 DDAYASIDLPILGLLFATMVVGSYLKNAGMFKHLGrLLAWRSQGGR--DLLCRVCVVTALASALFTNDTCCVVLTEFVLE 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  468 LCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTNhfivdNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYHNid 547
Cdd:PLN00136 133 LAAERNLPAKPFLLALASSANIGSSATPIGNPQNLVIAFN-----SKITFPKFLLGILPAMLAGMAVNMVMLLCMYWK-- 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  548 alRLNEPKEMSELRREMKVWQRALNAVASCSkdaqlvrgtlqaKIKQLKRTLRRLQKGVGSTEVYTNTLDELKQKYPI-- 625
Cdd:PLN00136 206 --DLDGGAELSVDGKQMEAVEEGRSPASAKS------------TKQQSPALLQAGLNGDGNGDMSSMMSENISTKHPWfm 271
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  626 ----KNKTLLLQSagallFVIVCFFIQSVPHWRTLPLGWVALLGVILLLIILNRdDMEHLMHRIEWTTLLFFAAMFVMME 701
Cdd:PLN00136 272 qcteHRRKLFLKS-----FAYVVTVGMVVAYMVGLNMSWTAITTAIALVVVDFR-DAEPCLDTVSYSLLVFFSGMFITVS 345
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  702 CVERLGIFACISELTE--HVILSVGKSHRLAMaifMILWMSALASsildSIPVAAIM---VKLVTSLVAKPSLGLPLQPL 776
Cdd:PLN00136 346 GFNKTGLPGAIWNFMApySKVNSVGGISVLSV---IILLLSNLAS----NVPTVLLMgdeVAAAAALISPAAVTRSWLLL 418
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|.
gi 24581764  777 VWALTLgasmGGNGTLYGASANVIA---AGIAEQHGYKLSF 814
Cdd:PLN00136 419 AWVSTV----AGNLSLLGSAANLIVceqARRAPRNAYDLTF 455
 
Name Accession Description Interval E-value
P_permease cd01116
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ...
350-837 4.00e-153

Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.


Pssm-ID: 238536 [Multi-domain]  Cd Length: 413  Bit Score: 454.79  E-value: 4.00e-153
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 350 LLIFYALLVWELFERTFVAMICSILSV-TTLACFNdrPNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFE 428
Cdd:cd01116   1 FIITYALIIFEKVHRTVAALAGALWLViLGLATLS--PDLETIVSWVDWETLALLLGMMIIVSILSETGVFEYLAIWAVK 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 429 ISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTnh 508
Cdd:cd01116  79 ISKGRPWRLLLLLGLLTAFLSAFLDNVTTVLLMVPVTIRLCEVLGLNPVPVLISEVIAANIGGAATLIGDPPNIMIGS-- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 509 fivDNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYHNIDALRLNEPKEmselrremkvwqralnavascskdaqlvrgtl 588
Cdd:cd01116 157 ---AAGLTFNDFLLHMLPSVVLALVVTFILLYFLYRNILKAREEDVLA-------------------------------- 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 589 qakikqlkrtlrrlqkgvgstevytntLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHwrtLPLGWVALLGVIL 668
Cdd:cd01116 202 ---------------------------LAELEPKYPIKDKVLLLKSLTILTLVIIGFVLHSPLG---VSLGWIALLGALL 251
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 669 LLIILNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELTEHVILsvgksHRLAMAIFMILWMSALASSILD 748
Cdd:cd01116 252 LLLLADKLDFEDVLSRVEWDTLLFFAGLFVLVGGLEELGIIEWIAELLVGVIL-----GRIAVAVILILWISALLSAFID 326
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 749 SIPVAAIMVKLVTSLVAkpSLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYKLSFTRYLRTVFPMMLGQ 828
Cdd:cd01116 327 NIPVTATMIPIVKDLAS--QLGIPLLPLWWALALGACLGGNGTLIGASANVVAAGIAEQHGYKISFWEFLKVGFPIMLVS 404

                ....*....
gi 24581764 829 ITLMTVYLL 837
Cdd:cd01116 405 LILATVYLL 413
ArsB_NhaD_permease cd00625
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ...
354-836 7.89e-85

Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.


Pssm-ID: 238344 [Multi-domain]  Cd Length: 396  Bit Score: 276.44  E-value: 7.89e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 354 YALLVWELFERTFVAMICSILSVTTLAcfndrPNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFEISGGK 433
Cdd:cd00625   1 YVLIRPEKLPRAVVALLGAVLLVLLGV-----VSPKEALSAIDWETILLLFGMMILSAALEETGLFDRLAAKLARASKGS 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 434 IWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTNhfivdN 513
Cdd:cd00625  76 RRLLLLLMLLTAALSAFFSNDATAVLLTPIVLALLRKLGLSPPVPLLLALAFAANIGGAATPIGNPPNLIIASL-----S 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 514 DVTFPTFVAHTFPGVILAVIQSCVYLRLFYHNIDALRLNEPKEMselrremkvwqralnavascskdaqlvrgtlqakik 593
Cdd:cd00625 151 GLGFLDFLAFMAPPALGLLLLLLGLLYLLFRKKLLLPDEDKLTV------------------------------------ 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 594 qlkrtlrrlqkgvgstevytntLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHWRTLPLGWVALLGVIllliil 673
Cdd:cd00625 195 ----------------------LAEPLPARPLLKKFLLLALLLLLLFVLLFFFLIPLGLIALLGALLLLLLLVR------ 246
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 674 nRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELTEHVIlsvgkSHRLAMAIFMILWMSALASSILDSIPVA 753
Cdd:cd00625 247 -GLDPEEVLKSVDWGTLLFFAGLFVLVGALESTGLLEWLAELLVALV-----GLPPLAALLLIGLLSALLSNFISNVPTV 320
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 754 AIMVKLVTSLVakpslglPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYKLSFTRYLRTVFPMMLGQITLMT 833
Cdd:cd00625 321 ALLLPIAASLA-------PPEPAWLALALGSTLGGNLTLIGSLANLIPLGAAENAGVGISFGEFLKVGLPLTLLSLVVSL 393

                ...
gi 24581764 834 VYL 836
Cdd:cd00625 394 LYL 396
ArsB COG1055
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];
344-841 2.17e-81

Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];


Pssm-ID: 440675 [Multi-domain]  Cd Length: 415  Bit Score: 267.76  E-value: 2.17e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 344 ILAGVILLIFYALLVWELFE--RTFVAMICSILSVTTLACfndrpNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDY 421
Cdd:COG1055   3 ILALAIFVLTYLLIILEPRGlnRAVAALLGAALLLLLGVV-----SLEDALEAIDWNTILFLLGMMIIVAILDESGFFEW 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 422 LAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPIS 501
Cdd:COG1055  78 LAIKLARRAKGSPRRLLWLLGLLTALLSAFLDNDTTALLLTPVVLAIARRLGLNPVPFLIAIVFAANIGGAATPIGNPTN 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 502 IIVSTNhfivdNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYhnidalrlnepkemselRREMKVwqralnavascskda 581
Cdd:COG1055 158 IMIASA-----GGLSFLDFLANLFPPSLVSLLVTLLVLYLLF-----------------RKELPA--------------- 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 582 qlvrgtlqakikqlkrtlrrlqkgvgstevytNTLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHwrtLPLGWV 661
Cdd:COG1055 201 --------------------------------APDLEDDPKEAIKDRRLLRISLLVLALLLVGFVLHSFLG---LPPALI 245
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 662 ALLGVILLLIIlNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELTEHVIlsvgkSHRLAMAIFMILWMSA 741
Cdd:COG1055 246 ALLGAAVLLLL-ARVDVREVLKKVDWSTLLFFIGLFVVVGGLENTGLLDLLAELLASLT-----GGNLLLAALLILWLSA 319
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 742 LASSILDSIPVAAIMVKLVTSLvakpSLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYKLSFTRYLRTV 821
Cdd:COG1055 320 ILSAVVDNVPLVAALLPLIPDL----GATGNPEPLWLALALGATLGGNLTPIGSAANVIVLGIAEKKGIKISFGEFLKVG 395
                       490       500
                ....*....|....*....|
gi 24581764 822 FPMMLGQITLMTVYLLVAHV 841
Cdd:COG1055 396 LPLTLLTLLIALLYLLLLYF 415
CitMHS pfam03600
Citrate transporter;
354-783 4.60e-65

Citrate transporter;


Pssm-ID: 460985 [Multi-domain]  Cd Length: 342  Bit Score: 221.42  E-value: 4.60e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   354 YALLVWELFERTFVAMICSILSVTTLAcfndrPNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFEISGGK 433
Cdd:pfam03600   1 YVLIITEKLPRDVVALLGAVLLVLLGV-----LTPEEALSGIDSPTILLLLGMMIIGAILERTGLFDRLALKLLRLAGGK 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   434 IWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTNHFIvdn 513
Cdd:pfam03600  76 PRRLLVALMLATALLSAFLSNDGTVLIMIPIVLALARRLGLPPSPLLIALAFAANIGGTATPIGDPPNIIIASALGL--- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   514 dvTFPTFVAHTFPGVILAVIQSC-VYLRLFYHNIDALRLNEPKEMSELRremkvwqralnavascskdaqlvrgtlqaki 592
Cdd:pfam03600 153 --SFGDFGFFMFPPVGVALLLVGlLPLLLIFRKLLPVRKEEEAELEELR------------------------------- 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   593 kqlkrtlrrlqkgvgstevytntldelkqKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHWRTLPLgwvallgvillLII 672
Cdd:pfam03600 200 -----------------------------KRAIKDKLLLAISALVLALVILGFLLLSVLALAGALL-----------LLL 239
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   673 LNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELtehvilsVGKSHRLAMAIFMILWMSALASSILDSIPV 752
Cdd:pfam03600 240 TGVLDPEEALKAVDWSTLLFFAGLFILVGALEKTGLADALADA-------LGGLSGLLVALALILWLSALLSAFISNVPT 312
                         410       420       430
                  ....*....|....*....|....*....|.
gi 24581764   753 AAIMVKLVTSLVAKPSLGlPLQPLVWALTLG 783
Cdd:pfam03600 313 AALMAPIIVGMAPAAGLG-DPDPLAWALAVG 342
YbiR_permease cd01117
Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to ...
364-838 1.53e-32

Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.


Pssm-ID: 238537 [Multi-domain]  Cd Length: 384  Bit Score: 130.48  E-value: 1.53e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 364 RTFVAMICSILSVttlaCFNDrPNMDEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFEiSGGKIWPMIYSLCL 443
Cdd:cd01117  13 RWAIALLGAALML----LFGV-ISLEDAPAAIDLDTIILLFGLMVVSAALELSGFFDALGSRILV-KAGSPRRLLFLLVL 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 444 VTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTNHFIvdndvTFPTFVAH 523
Cdd:cd01117  87 LSGILSALLTNDTACLVFTPIVLELARVAGLPPIPLLLALATAANIGSAATPIGNPQNLLIASESGI-----SFPFFLAA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 524 TFPGVILA-VIQSCVYLRLFyhNIDALRLNEPKEmSELRREMKVWQRAlnavascskdaqlvrgtlqakikqlkrtlrrl 602
Cdd:cd01117 162 MAPLALLGlLLLLILLLVLF--PGELKGLPLDKA-TKEEGVGARKLAV-------------------------------- 206
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 603 qkgvgstevytntldelkqkypiknKTLLLqsagaLLFVIVCFFIQSVPHwrtlpLGWVALLGVILLLIILNRDDMEHLm 682
Cdd:cd01117 207 -------------------------KLLVL-----ILLLLVAFLALLGVI-----PLWTAALVAAVLLLLTRLKPRRVL- 250
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 683 HRIEWTTLLFFAAMFVMMECVERLGIFACISELtehvilsvgksHRLAMAIFMILWMSALASSILDSIPVAAIMVKLVTS 762
Cdd:cd01117 251 KKVDWGLLLFFAGLFILVGGFAQGLPLEGLSRL-----------LPLLDSVLSLFLVSIGLSQLISNVPAVLLLLPFLPS 319
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24581764 763 LVAKPSLglplqplvwALTLGASMGGNGTLYGASANVIAAGIAEQHGYKLSFTRYLRTVFPMMLgqITLMTVYLLV 838
Cdd:cd01117 320 ADEKDWL---------LLAAGSTIAGNLTLLGSAANLIVAEAAERRGVRLSFGEFLKYGVPLTL--LTAAIGILWL 384
PLN00136 PLN00136
silicon transporter; Provisional
389-814 2.91e-16

silicon transporter; Provisional


Pssm-ID: 215070 [Multi-domain]  Cd Length: 482  Bit Score: 82.35  E-value: 2.91e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  389 DEIIQWMDMELLTLLFCMMLLILILTETGVFDYLA-VFCFEISGGKiwPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIR 467
Cdd:PLN00136  55 DDAYASIDLPILGLLFATMVVGSYLKNAGMFKHLGrLLAWRSQGGR--DLLCRVCVVTALASALFTNDTCCVVLTEFVLE 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  468 LCEVMQLDPLPVVMGIIVHANIGGALTPIGDPISIIVSTNhfivdNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYHNid 547
Cdd:PLN00136 133 LAAERNLPAKPFLLALASSANIGSSATPIGNPQNLVIAFN-----SKITFPKFLLGILPAMLAGMAVNMVMLLCMYWK-- 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  548 alRLNEPKEMSELRREMKVWQRALNAVASCSkdaqlvrgtlqaKIKQLKRTLRRLQKGVGSTEVYTNTLDELKQKYPI-- 625
Cdd:PLN00136 206 --DLDGGAELSVDGKQMEAVEEGRSPASAKS------------TKQQSPALLQAGLNGDGNGDMSSMMSENISTKHPWfm 271
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  626 ----KNKTLLLQSagallFVIVCFFIQSVPHWRTLPLGWVALLGVILLLIILNRdDMEHLMHRIEWTTLLFFAAMFVMME 701
Cdd:PLN00136 272 qcteHRRKLFLKS-----FAYVVTVGMVVAYMVGLNMSWTAITTAIALVVVDFR-DAEPCLDTVSYSLLVFFSGMFITVS 345
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764  702 CVERLGIFACISELTE--HVILSVGKSHRLAMaifMILWMSALASsildSIPVAAIM---VKLVTSLVAKPSLGLPLQPL 776
Cdd:PLN00136 346 GFNKTGLPGAIWNFMApySKVNSVGGISVLSV---IILLLSNLAS----NVPTVLLMgdeVAAAAALISPAAVTRSWLLL 418
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|.
gi 24581764  777 VWALTLgasmGGNGTLYGASANVIA---AGIAEQHGYKLSF 814
Cdd:PLN00136 419 AWVSTV----AGNLSLLGSAANLIVceqARRAPRNAYDLTF 455
CitT COG0471
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
404-845 1.01e-15

Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];


Pssm-ID: 440239 [Multi-domain]  Cd Length: 369  Bit Score: 79.81  E-value: 1.01e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 404 FCMMLLILILTETGVFDYLAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLD-----PLP 478
Cdd:COG0471   1 LGGFVLAAALEKTGLGRRIALLLLKRFGGSPLRLLLGLMLATALLSAFISNTARAAMMLPIALSIAAALGSEkrskfGSA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 479 VVMGIIVHANIGGALTPIGDPISIIVSTnhFIVDN---DVTFPTFVAHTFPGVILAVIQSCVYLRLFYhnidalrlnePK 555
Cdd:COG0471  81 LLLPIAFAASIGGMGTLIGTPPNLIAAG--LLEEAtgiPISFFEWMLVGLPVALVGLLLLWLVLYRLL----------PP 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 556 EMSELRREMKVWQRALNAVASCSKDAQLVRGTLQAKIkqlkrtlrrlqkGVGSTEVYTntldelkqKYPIknktlllqSA 635
Cdd:COG0471 149 EIKEVPGSKEVIREELAELGPLSRREKIALAIFALTV------------LLWITGSLH--------GIPI--------AV 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 636 GALLFVIVCFFIQSVphwrtlplgwvallgvillliilnrdDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISEL 715
Cdd:COG0471 201 VALLGAVLLLLTGVL--------------------------TWKDAYKSIPWGVLLLFGGGLALGAALEKTGLAAWLADA 254
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 716 tehvILSVGKSHRLAMAIFMILWMSALASSILDSIPVAAIMVKLVTSLVAkpSLGLPLQPLVWALTLGASMGGNgTLYGA 795
Cdd:COG0471 255 ----LLPLLGGLSPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQ--ALGVNPLPLALAVAFAASCAFL-LPVGT 327
                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|
gi 24581764 796 SANVIAAGIaeqhGYkLSFTRYLRTVFPMMlgqITLMTVYLLVAHVVFEW 845
Cdd:COG0471 328 PPNAIVYGS----GY-YKFKDFLKVGLPLN---LIGLVVLLLLGPLWWPL 369
ArsB_NhaD_permease cd00625
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ...
685-838 1.70e-14

Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.


Pssm-ID: 238344 [Multi-domain]  Cd Length: 396  Bit Score: 76.13  E-value: 1.70e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 685 IEWTTLLFFAAMFVMMECVERLGIFACISelteHVILSVGKSHRLAMAIFMILwmSALASSILDSIPVAAIMVKLVTsLV 764
Cdd:cd00625  37 IDWETILLLFGMMILSAALEETGLFDRLA----AKLARASKGSRRLLLLLMLL--TAALSAFFSNDATAVLLTPIVL-AL 109
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 24581764 765 AKPSLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAeqhgyKLSFTRYLRTVFPMMLGQITLMTVYLLV 838
Cdd:cd00625 110 LRKLGLSPPVPLLLALAFAANIGGAATPIGNPPNLIIASLS-----GLGFLDFLAFMAPPALGLLLLLLGLLYL 178
ArsB_permease cd01118
Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in ...
403-826 3.42e-14

Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in eubacteria and archaea. A typical ArsB permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump (ArsAB). The ArsAB complex is similar in many ways to ATP-binding cassette transporters, which have two groups of six transmembrane-spanning helical segments and two nucleotide-binding domains. The ArsB proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life.


Pssm-ID: 238538 [Multi-domain]  Cd Length: 416  Bit Score: 75.38  E-value: 3.42e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 403 LFCMMLLILILTETGVFDYLAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDP---LPV 479
Cdd:cd01118  58 LIGVILLSLLLDEEGFFEWVAALAARWARGSGRKLFTLIVLLGAAVTAFFANDGTALILTPIVIALLRALGAKKnrtLPF 137
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 480 VMGIIVHANIGGALTPIGDPISIIVSTNHfivdnDVTFPTFVAHTFPGVILAVIQSCVYLRLFYHNIDALRLNEpkemse 559
Cdd:cd01118 138 LYACAFIADAASLPLPISNLVNIVTAGYF-----GIGFTEYAALMFLPSIVSILATYVVLYLFFRRALPKRLET------ 206
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 560 lrremkvwqRALNAVASCSKDAQLVRgtlqakikqlkrtlrrlqkgvgstevytntldelkqkypiknktlllQSAGALL 639
Cdd:cd01118 207 ---------ASVKKPSLAIKDPLLFG-----------------------------------------------LAWTLLV 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 640 FVIVCFFIQSVPHWRTLPLGWVALLGVILLLIILNRDDMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELtehv 719
Cdd:cd01118 231 LLVVSAFGVDILLIPPSFIAGVLALIFLLLARRGGAINPLKVLKEAPWGVLLFSLGLYVVVFGLKNAGLTAILADL---- 306
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 720 iLSVGKSHRLAMAIFMILWMSALASSILDSIPVAAIMVKLVTSLVAKPSLglplqplVWALTLGASMGGNGTLYGASANV 799
Cdd:cd01118 307 -LNWLVSQGLLAAILGVGLLAAFLSNVMNNLPAVLIGALALAAGHAPEAL-------VYANLIGVDLGPKLTPIGSLATL 378
                       410       420
                ....*....|....*....|....*..
gi 24581764 800 IAAGIAEQHGYKLSFTRYLRTVFPMML 826
Cdd:cd01118 379 LWLHVLRRKGIRVSWGYYLKVGLIVTP 405
SLC13_permease cd01115
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ...
349-505 2.05e-12

Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.


Pssm-ID: 238535 [Multi-domain]  Cd Length: 382  Bit Score: 69.92  E-value: 2.05e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 349 ILLIFYALL-VWELFERTFVAMICSILSVTT--------LACFNDRPNMdeiiqwmdmelltLLFCMMLLILILTETGVF 419
Cdd:cd01115   2 AILVFAAVLfVTEALPLDVTALLVPVLLVLLgvvppkeaFSGFSDPAVI-------------LFLAGFILGAALTRTGLA 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 420 DYLAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIGDP 499
Cdd:cd01115  69 KRIATKLLKRAGKGERRLLLLLMLVTAFLSAFMSNTATVAIMLPVALGLAAKLDISPSRLLMPLAFAASIGGMLTLIGTP 148

                ....*.
gi 24581764 500 ISIIVS 505
Cdd:cd01115 149 PNLVAS 154
CitMHS pfam03600
Citrate transporter;
653-836 2.30e-12

Citrate transporter;


Pssm-ID: 460985 [Multi-domain]  Cd Length: 342  Bit Score: 69.26  E-value: 2.30e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   653 WRTLPLGWVALLGVILLLIILNRDDMEHLMHrIEWTTLLFFAAMFVMMECVERLGIFACISelteHVILSVGKSHRLAMa 732
Cdd:pfam03600   6 TEKLPRDVVALLGAVLLVLLGVLTPEEALSG-IDSPTILLLLGMMIIGAILERTGLFDRLA----LKLLRLAGGKPRRL- 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   733 IFMILWMSALASSILDSIPVAAIMVKLVTSLVAKpsLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYKL 812
Cdd:pfam03600  80 LVALMLATALLSAFLSNDGTVLIMIPIVLALARR--LGLPPSPLLIALAFAANIGGTATPIGDPPNIIIASALGLSFGDF 157
                         170       180
                  ....*....|....*....|....
gi 24581764   813 SFTRYLRTVFPMMLGQITLMTVYL 836
Cdd:pfam03600 158 GFFMFPPVGVALLLVGLLPLLLIF 181
ArsB COG1055
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];
321-544 1.49e-11

Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];


Pssm-ID: 440675 [Multi-domain]  Cd Length: 415  Bit Score: 67.46  E-value: 1.49e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 321 DVEVDLAIVLNYNPLIVNARTGSILAGVILLIFYALLVWELF--ERTFVAMIC-SILSVTTlacfndRPNMDEIIQWMDM 397
Cdd:COG1055 197 ELPAAPDLEDDPKEAIKDRRLLRISLLVLALLLVGFVLHSFLglPPALIALLGaAVLLLLA------RVDVREVLKKVDW 270
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 398 ELLTLLFCMMLLILILTETGVFDYLAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPL 477
Cdd:COG1055 271 STLLFFIGLFVVVGGLENTGLLDLLAELLASLTGGNLLLAALLILWLSAILSAVVDNVPLVAALLPLIPDLGATGNPEPL 350
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 24581764 478 pvVMGIIVHANIGGALTPIGDPISIIVSTNHFIVDNDVTFPTFVAHTFPGVILAVIQSCVYLRLFYH 544
Cdd:COG1055 351 --WLALALGATLGGNLTPIGSAANVIVLGIAEKKGIKISFGEFLKVGLPLTLLTLLIALLYLLLLYF 415
ArsB_NhaD_permease cd00625
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ...
314-539 2.54e-11

Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.


Pssm-ID: 238344 [Multi-domain]  Cd Length: 396  Bit Score: 66.50  E-value: 2.54e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 314 FRLHIYSDVEVDLAIVLNYNPLIVNARTGSILAGVILLIFyALLVWELFERTFVAMICSILSVTTLACFNDRPNMDEIIQ 393
Cdd:cd00625 180 FRKKLLLPDEDKLTVLAEPLPARPLLKKFLLLALLLLLLF-VLLFFFLIPLGLIALLGALLLLLLLVRGLDPEEVLKSVD 258
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 394 WmdmELLTLLFCMMLLILILTETGVFDYLAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIrlcevmQ 473
Cdd:cd00625 259 W---GTLLFFAGLFVLVGALESTGLLEWLAELLVALVGLPPLAALLLIGLLSALLSNFISNVPTVALLLPIAA------S 329
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 474 LDPLPVVMGIIVH-ANIGGALTPIG---DPISIIVSTNHFIvdnDVTFPTFVAHTFPGVILAVIQSCVYL 539
Cdd:cd00625 330 LAPPEPAWLALALgSTLGGNLTLIGslaNLIPLGAAENAGV---GISFGEFLKVGLPLTLLSLVVSLLYL 396
SLC13_permease cd01115
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ...
688-838 5.24e-11

Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.


Pssm-ID: 238535 [Multi-domain]  Cd Length: 382  Bit Score: 65.30  E-value: 5.24e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 688 TTLLFFAAMFVMMECVERLGIFACISElteHVILSVGKSHRLAMAIFMIlwMSALASSILDSIPVAAIMVKLVTSLVAKp 767
Cdd:cd01115  47 PAVILFLAGFILGAALTRTGLAKRIAT---KLLKRAGKGERRLLLLLML--VTAFLSAFMSNTATVAIMLPVALGLAAK- 120
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24581764 768 sLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAEQHGYK-LSFTRYLRTVFPMMLgqitLMTVYLLV 838
Cdd:cd01115 121 -LDISPSRLLMPLAFAASIGGMLTLIGTPPNLVASGYLESLGGQgFSFFEFTPIGLPLLI----IGLLYLWF 187
CitT COG0471
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
340-504 4.66e-10

Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];


Pssm-ID: 440239 [Multi-domain]  Cd Length: 369  Bit Score: 62.48  E-value: 4.66e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 340 RTGSILAGVILL-IFYALLVWELferTFVAMI-CSILSVTTLAcfndrpNMDEIIQWMDMELLTLLFCMMLLILILTETG 417
Cdd:COG0471 176 IALAIFALTVLLwITGSLHGIPI---AVVALLgAVLLLLTGVL------TWKDAYKSIPWGVLLLFGGGLALGAALEKTG 246
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 418 VFDYLAVFCFEISGGK-IWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVhANIGGALTPI 496
Cdd:COG0471 247 LAAWLADALLPLLGGLsPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQALGVNPLPLALAVAF-AASCAFLLPV 325

                ....*...
gi 24581764 497 GDPISIIV 504
Cdd:COG0471 326 GTPPNAIV 333
P_permease cd01116
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ...
340-539 3.01e-08

Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.


Pssm-ID: 238536 [Multi-domain]  Cd Length: 413  Bit Score: 56.88  E-value: 3.01e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 340 RTGSILAGVILLIFYALLVWelFERTFVAMicsiLSVTTLACFNDRPNMDEIIQwmDMELLTLLFCMMLLILI--LTETG 417
Cdd:cd01116 219 KSLTILTLVIIGFVLHSPLG--VSLGWIAL----LGALLLLLLADKLDFEDVLS--RVEWDTLLFFAGLFVLVggLEELG 290
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 418 VFDYLAVFCFEISGGKIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHANIGGALTPIG 497
Cdd:cd01116 291 IIEWIAELLVGVILGRIAVAVILILWISALLSAFIDNIPVTATMIPIVKDLASQLGIPLLPLWWALALGACLGGNGTLIG 370
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 24581764 498 DPISIIV---STNHFIvdnDVTFPTFVAHTFPGVILAVIQSCVYL 539
Cdd:cd01116 371 ASANVVAagiAEQHGY---KISFWEFLKVGFPIMLVSLILATVYL 412
P_permease cd01116
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ...
677-845 7.14e-07

Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.


Pssm-ID: 238536 [Multi-domain]  Cd Length: 413  Bit Score: 52.64  E-value: 7.14e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 677 DMEHLMHRIEWTTLLFFAAMFVMMECVERLGIFACISELTehVILSVGKSHRLamaIFMILWMSALASSILDSIPVAAIM 756
Cdd:cd01116  37 DLETIVSWVDWETLALLLGMMIIVSILSETGVFEYLAIWA--VKISKGRPWRL---LLLLGLLTAFLSAFLDNVTTVLLM 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 757 VKLVTSLVakPSLGLPLQPLVWALTLGASMGGNGTLYGASANVIAAGIAeqhgyKLSFTRYLRTVFPMMLgqitlmtVYL 836
Cdd:cd01116 112 VPVTIRLC--EVLGLNPVPVLISEVIAANIGGAATLIGDPPNIMIGSAA-----GLTFNDFLLHMLPSVV-------LAL 177

                ....*....
gi 24581764 837 LVAHVVFEW 845
Cdd:cd01116 178 VVTFILLYF 186
CitMHS pfam03600
Citrate transporter;
326-483 8.62e-07

Citrate transporter;


Pssm-ID: 460985 [Multi-domain]  Cd Length: 342  Bit Score: 51.93  E-value: 8.62e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   326 LAIVLNYNPLIVNARTGSILAGVILLIFYALLVWELFerTFVAMICSILSVTTLACFNDRPNMDEIIQWMDMELLTLLFC 405
Cdd:pfam03600 185 LPVRKEEEAELEELRKRAIKDKLLLAISALVLALVIL--GFLLLSVLALAGALLLLLTGVLDPEEALKAVDWSTLLFFAG 262
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764   406 MMLLILILTETGVFDYLAVFCFEISGgkIWPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQ---LDPLPVVMG 482
Cdd:pfam03600 263 LFILVGALEKTGLADALADALGGLSG--LLVALALILWLSALLSAFISNVPTAALMAPIIVGMAPAAGlgdPDPLAWALA 340

                  .
gi 24581764   483 I 483
Cdd:pfam03600 341 V 341
SLC13_permease cd01115
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ...
342-543 1.01e-05

Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.


Pssm-ID: 238535 [Multi-domain]  Cd Length: 382  Bit Score: 48.74  E-value: 1.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 342 GSILAGVILLIFYALLVWELFERTFVAM-----ICSILSVTTLAC-------FNDRPNMDEIIQWMDMELLTLLFCMMLL 409
Cdd:cd01115 174 GLPLLIIGLLYLWFIFRLAVLIITIVLLaalaaITGLLPVSVAIAigaivlvFGGVLLTKEDYKSIDWGIIFLFAGGIPL 253
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24581764 410 ILILTETGVFDYLAVFCFEISGGKIWPMI-YSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMGIIVHAN 488
Cdd:cd01115 254 GKALESSGAAALIAEALISLLGGLPPFAIlLLLCLLTLVLTNFISNTATAVLLAPIALSIALSLGLPPEALLLAVAIGAS 333
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*
gi 24581764 489 IgGALTPIGDPISIIVstnhfIVDNDVTFPTFVAHTFPGVILAVIQSCVYLRLFY 543
Cdd:cd01115 334 C-AFMLPVGTPPNAIV-----LGPGGYKFSDFAKVGLPLSILSLVVSVTMIPLIW 382
PLN00137 PLN00137
NHAD transporter family protein; Provisional
443-498 1.28e-03

NHAD transporter family protein; Provisional


Pssm-ID: 215071  Cd Length: 424  Bit Score: 41.99  E-value: 1.28e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 24581764  443 LVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLDPLPVVMgIIVHANIGGALTPIGD 498
Cdd:PLN00137 109 FITFFLSSILDNLTTTIVMVSLLRKLVPPSEYRKLLGAV-VVVAANAGGAWTPIGD 163
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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