NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|19115912|ref|NP_595000|]
View 

amino acid transmembrane transporter Isp5 [Schizosaccharomyces pombe]

Protein Classification

APC family permease( domain architecture ID 1903533)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0055085|GO:0022857
TCDB:  2.A.3

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
AA_permease_2 super family cl45918
Amino acid permease;
80-549 5.29e-164

Amino acid permease;


The actual alignment was detected with superfamily member TIGR00913:

Pssm-ID: 459263  Cd Length: 478  Bit Score: 476.01  E-value: 5.29e-164
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912    80 KRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFP-INGSFHTYGTRFIHP 158
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   159 SWGFTLGWNYLASFLATYPLELITASICLQFWIN-INSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFII 237
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDkVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   238 CGIVIDCGGVRtdHRGYIGATIFRK-NAFIHG-----FHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVF 311
Cdd:TIGR00913 161 LSIILNCGGGP--NHGYIGFRYWHDpGAFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTF 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   312 IRVSLFYILALFVVSLLISGRDERL---TTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHS 388
Cdd:TIGR00913 239 WRILVFYILTLFLIGFLVPYNDPRLlssSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYA 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   389 MAEQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGK 468
Cdd:TIGR00913 319 LAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGR 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   469 SYDEVGYHSPFGIYGACYGAFIIILVFITEFYVSIFPIGasPDAGAFFQSYLCFPVVVIVFIAHALITRQKF-RKLSEID 547
Cdd:TIGR00913 399 SLDELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPVK--FSAKSFFEAYLSLPIFIALYIGHKVYKRDKLiIKLDDID 476

                  ..
gi 19115912   548 LD 549
Cdd:TIGR00913 477 LD 478
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
80-549 5.29e-164

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 476.01  E-value: 5.29e-164
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912    80 KRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFP-INGSFHTYGTRFIHP 158
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   159 SWGFTLGWNYLASFLATYPLELITASICLQFWIN-INSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFII 237
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDkVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   238 CGIVIDCGGVRtdHRGYIGATIFRK-NAFIHG-----FHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVF 311
Cdd:TIGR00913 161 LSIILNCGGGP--NHGYIGFRYWHDpGAFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTF 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   312 IRVSLFYILALFVVSLLISGRDERL---TTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHS 388
Cdd:TIGR00913 239 WRILVFYILTLFLIGFLVPYNDPRLlssSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYA 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   389 MAEQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGK 468
Cdd:TIGR00913 319 LAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGR 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   469 SYDEVGYHSPFGIYGACYGAFIIILVFITEFYVSIFPIGasPDAGAFFQSYLCFPVVVIVFIAHALITRQKF-RKLSEID 547
Cdd:TIGR00913 399 SLDELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPVK--FSAKSFFEAYLSLPIFIALYIGHKVYKRDKLiIKLDDID 476

                  ..
gi 19115912   548 LD 549
Cdd:TIGR00913 477 LD 478
AA_permease pfam00324
Amino acid permease;
87-543 1.32e-142

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 420.96  E-value: 1.32e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912    87 HIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSWGFTLGW 166
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   167 NYLASFLATYPLELITASICLQFWININS----GIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFIICGIVI 242
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPDipylWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   243 DCGGVRTDHRG--YIGATIFrKNAFIHGF-HGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVSLFYI 319
Cdd:pfam00324 161 LSGGNPNDGAIfrYLGDNGG-KNNFPPGFgKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   320 LALFVVSLLISGRDERLTTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAEQGHAPKWF 399
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   400 KYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKSYDEVGYHSPF 479
Cdd:pfam00324 320 KKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAPL 399
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19115912   480 GIYGACYGAFIIILVFITEFYVSIFPIGASP---DAGAFFQSYLCFPVVVIVFIAHALITRQKFRKL 543
Cdd:pfam00324 400 GPLGVILGLAAIIIILIIQFLYAFLPVPGGPknwGAGSFAAAYLIVLLFLIILIGVKLHVKNWKPQL 466
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
70-550 2.63e-127

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 381.44  E-value: 2.63e-127
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  70 PPEDGKPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFH 149
Cdd:COG0833   1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 150 TYGTRFIHPSWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLK 228
Cdd:COG0833  81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFpDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 229 VMAMVGFIICGIVIdCGGVRTDHrGYIGATIFRKNA-FIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAV 307
Cdd:COG0833 161 VITVIAFIIVGLLM-IFGIIGGH-APGFSNFTTGDGpFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAI 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 308 KQVFIRVSLFYILALFVVSLLISGRDERLTTlsataaSPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLH 387
Cdd:COG0833 239 RQVFWRILLFYILAIFVIAALIPYTDAGVAE------SPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLW 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 388 SMAEQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQG 467
Cdd:COG0833 313 SLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQG 392
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 468 KSYDEVGYHSPFGIYGAcYGAFIIILVFItefyvsifpIGASPDAGAFFQSYLCFPVVVIVFIAHALITRQKFRKLSEID 547
Cdd:COG0833 393 GDLEDLKYKAPLFPFGP-IFAFILCLIVI---------IGQAFDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMD 462

                ...
gi 19115912 548 LDT 550
Cdd:COG0833 463 LSP 465
PRK10836 PRK10836
lysine transporter; Provisional
75-554 4.21e-80

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 260.14  E-value: 4.21e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   75 KPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTR 154
Cdd:PRK10836   9 EAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQN 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  155 FIHPSWGFTLGWNYLASFLATYPLELITASICLQFWININSG-IWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMV 233
Cdd:PRK10836  89 YVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGwIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVI 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  234 GFIICGIVIDCGGVR-TDHRGYIGATIfRKNAFIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFI 312
Cdd:PRK10836 169 VFIIVGVLMIIGIFKgAEPAGWSNWTI-GDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFW 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  313 RVSLFYILALFVVSLLISGRDERL--TTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMA 390
Cdd:PRK10836 248 RILLFYVFAILIISLIIPYTDPSLlrNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLA 327
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  391 EQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKSY 470
Cdd:PRK10836 328 CDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDL 407
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  471 DEVGYHSPFGIYGACYGAFIIILVFITEFYVSIfpIGASPDAGAFFQSYLCFPVVVIVFIAHALITRQKFRKLSEIDLDT 550
Cdd:PRK10836 408 NDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAF--LKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQ 485

                 ....
gi 19115912  551 GFSK 554
Cdd:PRK10836 486 NDKK 489
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
80-549 5.29e-164

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 476.01  E-value: 5.29e-164
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912    80 KRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFP-INGSFHTYGTRFIHP 158
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   159 SWGFTLGWNYLASFLATYPLELITASICLQFWIN-INSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFII 237
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDkVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   238 CGIVIDCGGVRtdHRGYIGATIFRK-NAFIHG-----FHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVF 311
Cdd:TIGR00913 161 LSIILNCGGGP--NHGYIGFRYWHDpGAFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTF 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   312 IRVSLFYILALFVVSLLISGRDERL---TTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHS 388
Cdd:TIGR00913 239 WRILVFYILTLFLIGFLVPYNDPRLlssSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYA 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   389 MAEQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGK 468
Cdd:TIGR00913 319 LAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGR 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   469 SYDEVGYHSPFGIYGACYGAFIIILVFITEFYVSIFPIGasPDAGAFFQSYLCFPVVVIVFIAHALITRQKF-RKLSEID 547
Cdd:TIGR00913 399 SLDELPYKSQTGPYGSYYALFFNILILIAQGYVAFAPVK--FSAKSFFEAYLSLPIFIALYIGHKVYKRDKLiIKLDDID 476

                  ..
gi 19115912   548 LD 549
Cdd:TIGR00913 477 LD 478
AA_permease pfam00324
Amino acid permease;
87-543 1.32e-142

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 420.96  E-value: 1.32e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912    87 HIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSWGFTLGW 166
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   167 NYLASFLATYPLELITASICLQFWININS----GIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFIICGIVI 242
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPDipylWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   243 DCGGVRTDHRG--YIGATIFrKNAFIHGF-HGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVSLFYI 319
Cdd:pfam00324 161 LSGGNPNDGAIfrYLGDNGG-KNNFPPGFgKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   320 LALFVVSLLISGRDERLTTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAEQGHAPKWF 399
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   400 KYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKSYDEVGYHSPF 479
Cdd:pfam00324 320 KKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAPL 399
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19115912   480 GIYGACYGAFIIILVFITEFYVSIFPIGASP---DAGAFFQSYLCFPVVVIVFIAHALITRQKFRKL 543
Cdd:pfam00324 400 GPLGVILGLAAIIIILIIQFLYAFLPVPGGPknwGAGSFAAAYLIVLLFLIILIGVKLHVKNWKPQL 466
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
70-550 2.63e-127

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 381.44  E-value: 2.63e-127
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  70 PPEDGKPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFH 149
Cdd:COG0833   1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 150 TYGTRFIHPSWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLK 228
Cdd:COG0833  81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFpDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 229 VMAMVGFIICGIVIdCGGVRTDHrGYIGATIFRKNA-FIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAV 307
Cdd:COG0833 161 VITVIAFIIVGLLM-IFGIIGGH-APGFSNFTTGDGpFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAI 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 308 KQVFIRVSLFYILALFVVSLLISGRDERLTTlsataaSPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLH 387
Cdd:COG0833 239 RQVFWRILLFYILAIFVIAALIPYTDAGVAE------SPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLW 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 388 SMAEQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQG 467
Cdd:COG0833 313 SLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQG 392
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 468 KSYDEVGYHSPFGIYGAcYGAFIIILVFItefyvsifpIGASPDAGAFFQSYLCFPVVVIVFIAHALITRQKFRKLSEID 547
Cdd:COG0833 393 GDLEDLKYKAPLFPFGP-IFAFILCLIVI---------IGQAFDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMD 462

                ...
gi 19115912 548 LDT 550
Cdd:COG0833 463 LSP 465
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
70-539 6.27e-97

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 303.19  E-value: 6.27e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  70 PPEDGKPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAaSVLICYSLVGSMVLMTVYSLGELAVAFPINGSFH 149
Cdd:COG1113   4 SAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGP-AVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 150 TYGTRFIHPSWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLK 228
Cdd:COG1113  83 DYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFpDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 229 VMAMVGFIICGIVIDCGGVRTDHRGYIGATIFRKNA--FIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKA 306
Cdd:COG1113 163 VVAIVAFIVVGLLLIFFGFGLPGGPPAGLSNLWDHGgfFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKA 242
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 307 VKQVFIRVSLFYILALFVVSLLISgrderlTTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTL 386
Cdd:COG1113 243 INSVIWRILLFYVGSLFVILALVP------WNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRML 316
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 387 HSMAEQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQ 466
Cdd:COG1113 317 YSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPRE 396
                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19115912 467 GKsyDEVGYHSPFGIYGACYGAFIIILVFITEFYvsifpigaspDAGAFFQSYLCFPVVVIVFIAHALITRQK 539
Cdd:COG1113 397 GA--AALKFKMPGFPYTSYLTLAFLAAVLVLMAF----------DPDTRIALIVGPVWLALLVVGYFLVRRRR 457
PRK10836 PRK10836
lysine transporter; Provisional
75-554 4.21e-80

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 260.14  E-value: 4.21e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   75 KPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTR 154
Cdd:PRK10836   9 EAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQN 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  155 FIHPSWGFTLGWNYLASFLATYPLELITASICLQFWININSG-IWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMV 233
Cdd:PRK10836  89 YVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGwIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVI 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  234 GFIICGIVIDCGGVR-TDHRGYIGATIfRKNAFIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFI 312
Cdd:PRK10836 169 VFIIVGVLMIIGIFKgAEPAGWSNWTI-GDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFW 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  313 RVSLFYILALFVVSLLISGRDERL--TTLSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMA 390
Cdd:PRK10836 248 RILLFYVFAILIISLIIPYTDPSLlrNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLA 327
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  391 EQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKSY 470
Cdd:PRK10836 328 CDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDL 407
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  471 DEVGYHSPFGIYGACYGAFIIILVFITEFYVSIfpIGASPDAGAFFQSYLCFPVVVIVFIAHALITRQKFRKLSEIDLDT 550
Cdd:PRK10836 408 NDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAF--LKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQ 485

                 ....
gi 19115912  551 GFSK 554
Cdd:PRK10836 486 NDKK 489
PRK11387 PRK11387
S-methylmethionine permease;
71-545 3.43e-55

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 193.53  E-value: 3.43e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   71 PEDGKPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYsLVGSMVLMTVY-SLGELAVAFPINGSFH 149
Cdd:PRK11387   4 PTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAY-LIGALVVYLVMqCLGELSVAMPETGAFH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  150 TYGTRFIHPSWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLK 228
Cdd:PRK11387  83 VYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFpQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  229 VMAMVGFIICGividcggvrtdhrgyiGATIFR-------------KNAFIHGF--HGFCSVFSTAA---FSYAGTEYIG 290
Cdd:PRK11387 163 VVTILAFIVLG----------------GAAIFGfipmqdgspapglRNLTAEGWfpHGGLPILMTMVavnFAFSGTELIG 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  291 IAASETKNPAKAFPKAVKQVFIRVSLFYILALFVVSLLISGRDerlttlSATAASPFILALMDAKIRGLPHVLNAVILIS 370
Cdd:PRK11387 227 IAAGETENPAKVIPVAIRTTIARLVIFFVGTVLVLAALIPMQQ------AGVEKSPFVLVFEKVGIPYAADIFNFVILTA 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  371 VLTAANGITYTGSRTLHSMAEQGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWL 450
Cdd:PRK11387 301 ILSAANSGLYASGRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWL 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  451 SINVSYIIYRLAFKKQGKSYDEVGYHSPFGIYGACYGaFIIILVFItefyvsifpIGASPDAGAFFQSYLCFPVVVIVFI 530
Cdd:PRK11387 381 SICASHFMFRRRHLRDGKALSELAYRAPWYPLTPILG-FVLCLLAC---------VGLAFDPSQRIALWCGIPFVALCYG 450
                        490
                 ....*....|....*
gi 19115912  531 AHALITRQKFRKLSE 545
Cdd:PRK11387 451 AYYLTQRLKRNMTQE 465
PRK10249 PRK10249
phenylalanine transporter; Provisional
79-496 1.28e-53

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 189.04  E-value: 1.28e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   79 LKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAAsVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHP 158
Cdd:PRK10249  19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPA-VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGP 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  159 SWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFII 237
Cdd:PRK10249  98 FAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFpDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIG 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  238 CGIVIDCGGVRTDHRGYigATIFRKNAFIH-GFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVSL 316
Cdd:PRK10249 178 FGLWLLFSGHGGEKASI--DNLWRYGGFFAtGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILL 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  317 FYILALFVVSLLISGRDERlttlsaTAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAEQGHAP 396
Cdd:PRK10249 256 FYIGSLVVLLALYPWVEVK------SNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAP 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  397 KWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKSYDEVGYH 476
Cdd:PRK10249 330 KFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALL 409
                        410       420
                 ....*....|....*....|
gi 19115912  477 SPFGIYgACYGAFIIILVFI 496
Cdd:PRK10249 410 YPFGNY-LCIAFLGMILLLM 428
PRK10238 PRK10238
aromatic amino acid transporter AroP;
77-467 7.33e-50

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 179.00  E-value: 7.33e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   77 QKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAAsVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFI 156
Cdd:PRK10238   8 EQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPG-IILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYW 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  157 HPSWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGF 235
Cdd:PRK10238  87 GSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYpEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAM 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  236 IICG---IVIDCGGVRTDHRgyigaTIFRKNAFI-HGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVF 311
Cdd:PRK10238 167 IIFGgwlLFSGNGGPQATVS-----NLWDQGGFLpHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVI 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  312 IRVSLFYILALFVVSLLISgrderLTTLSATAaSPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAE 391
Cdd:PRK10238 242 YRILIFYIGSLAVLLSLMP-----WTRVTADT-SPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQ 315
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19115912  392 QGHAPKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQG 467
Cdd:PRK10238 316 QGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG 391
proY PRK10580
putative proline-specific permease; Provisional
78-511 2.17e-43

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 161.14  E-value: 2.17e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   78 KLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAaSVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIH 157
Cdd:PRK10580   6 KLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  158 PSWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFI 236
Cdd:PRK10580  85 PLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFpTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMI 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  237 ICGIVIDCGGVRTDHRGYIGATIFRKNAFI-HGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVS 315
Cdd:PRK10580 165 VAGIGIIIWGIGNGGQPTGIHNLWSNGGFFsNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRIL 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  316 LFYILALFVVSLLISGRDerlttlSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAEQGHA 395
Cdd:PRK10580 245 VFYVGTLFVIMSIYPWNQ------VGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSA 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  396 PKWFKYVDREGRP---LLAMAFVLCFGA-LGYIcesaQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKSyd 471
Cdd:PRK10580 319 PKIFSKTSRRGIPwvtVLVMTTALLFAVyLNYI----MPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK-- 392
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 19115912  472 EVGYHSPFGIYGACYGafIIILVFItefyvsIFPIGASPD 511
Cdd:PRK10580 393 ALKFKVPGGVATTIGG--LIFLVFI------IGLIGYHPD 424
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
72-507 5.35e-42

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 156.60  E-value: 5.35e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  72 EDGKPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAAsVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTY 151
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA-AILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 152 GTRFIHPSWGFTLGWNYLASFLATYPLELITASICLQFWININSGIWIT-VFIALLCFVNMFGVRGYGEVEFFVSSLKVM 230
Cdd:COG0531  81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIAlVLILLLTLLNLRGVKESAKVNNILTVLKLL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 231 AMVGFIICGIVidcggvrtdhrGYIGATIFRKNAFIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQV 310
Cdd:COG0531 161 VLLLFIVVGLF-----------AFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILS 229
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 311 FIRVSLFYILALFVVSLLISGRDErlttlsATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMA 390
Cdd:COG0531 230 LLIVGVLYILVSLALTGVVPYDEL------AASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMA 303
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912 391 EQGHAPKWFKYV-DREGRPLLAMAFVLCFGALGYICesaqSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKs 469
Cdd:COG0531 304 RDGLLPKVFAKVhPRFGTPVNAILLTGVIALLLLLL----GAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPR- 378
                       410       420       430
                ....*....|....*....|....*....|....*...
gi 19115912 470 ydevGYHSPFGIYGACYGAFIIILVFITEFYVSIFPIG 507
Cdd:COG0531 379 ----PFRVPLPLIPILGILLCLFLLYLLGPGALLIGLV 412
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
71-497 5.73e-42

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 157.20  E-value: 5.73e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   71 PEDGKPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAaSVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHT 150
Cdd:PRK11049  10 DQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGP-SIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSD 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  151 YGTRFIHPSWGFTLGWNYLASFLATYPLELITASICLQFWINiNSGIWITVF--IALLCFVNMFGVRGYGEVEFFVSSLK 228
Cdd:PRK11049  89 FASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFP-DLSDWVASLavVLLLLSLNLATVKMFGEMEFWFAMIK 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  229 VMAMVGFIICGIVIdcggVRTDHRGYIGATIFRKN------AFIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKA 302
Cdd:PRK11049 168 IVAIVALIVVGLVM----VAMHFQSPTGVEASFAHlwndggMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKS 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  303 FPKAVKQVFIRVSLFYILALFVVSLLISGRDerlttlSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTG 382
Cdd:PRK11049 244 LPRAINSIPIRIIMFYVFALIVIMSVTPWSS------VVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFST 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  383 SRTLHSMAEQGHAPKWFKYVDREGRP---LLAMAFVLCFGA-LGYICESAQsdTVFDWLLSISNLATLFVWLSINVSYII 458
Cdd:PRK11049 318 SRMLFGLAQEGVAPKAFAKLSKRAVPakgLTFSCICLLGGVvLLYVNPSVI--GAFTLVTTVSAILFMFVWTIILCSYLV 395
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|.
gi 19115912  459 YRlafKKQGKSYDEVGYHSPFGIY--GACYGAFIIILVFIT 497
Cdd:PRK11049 396 YR---KQRPHLHEKSIYKMPLGKLmcWVCMAFFAFVLVLLT 433
PRK10746 PRK10746
putative transport protein YifK; Provisional
75-470 2.13e-38

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 147.27  E-value: 2.13e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   75 KPQKLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAaSVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTR 154
Cdd:PRK10746   4 NKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  155 FIHPSWGFTLGWNYLASFLATYPLELITASICLQFWI-NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMV 233
Cdd:PRK10746  83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFpEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTII 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  234 GFIICGIVIDCGGVrTDHRGYIGATIFRKNA--FIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVF 311
Cdd:PRK10746 163 VMIVIGLGVIFFGF-GNGGQSIGFSNLTEHGgfFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVL 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  312 IRVSLFYILALFVVSLLISGRDerlttlSATAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAE 391
Cdd:PRK10746 242 WRILIFYVGAIFVIVTIFPWNE------IGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAK 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  392 QGHAPKWFKYVDREGRPLLAMAF-VLCF---GALGYICESAQSdtVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQG 467
Cdd:PRK10746 316 NRQLPAAMAKVSRHGVPVAGVAVsILILlvgSCLNYIIPNPQR--VFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAI 393

                 ...
gi 19115912  468 KSY 470
Cdd:PRK10746 394 ASH 396
PRK10197 PRK10197
GABA permease;
101-467 3.52e-37

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 143.61  E-value: 3.52e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  101 VWVGSKNTLREGGAAsVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSWGFTLGWNYLASFLATYPLEL 180
Cdd:PRK10197  12 LFVGSSVAIAEAGPA-VLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  181 ITASICLQFWINiNSGIWITVFIALLCFV--NMFGVRGYGEVEFFVSSLKVMAMVGFIICGIV--------IDCGGVRT- 249
Cdd:PRK10197  91 NIAAMILHSWVP-GIPIWLFSLVITLALTgsNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVaisgfypyAEVSGISRl 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  250 -DHRGYIGatifrknafiHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVSLFYILALFVVSLL 328
Cdd:PRK10197 170 wDSGGFMP----------NGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVAL 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  329 ISGRDERLTTLSATAASPFILALMDAKIrglphVLNAVILISVLTAANGITYTGSRTLHSMAEQGHAPKWFKYVDREGRP 408
Cdd:PRK10197 240 IPWNMPGLKAVGSYRSVLELLNIPHAKL-----IMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP 314
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 19115912  409 LLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQG 467
Cdd:PRK10197 315 YVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEG 373
PRK15049 PRK15049
L-asparagine permease;
81-504 2.81e-29

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 121.65  E-value: 2.81e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   81 RTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLIcYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSW 160
Cdd:PRK15049  28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKA 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  161 GFTLGWNYLASFLATYPLELITASICLQFWI---NINSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFII 237
Cdd:PRK15049 107 AYVAGWMYFINWAMTGIVDITAVALYMHYWGafgGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLV 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  238 CGIVIDCGGVRTDHRGyIGATIFRKNA--FIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVS 315
Cdd:PRK15049 187 VGTVFLGSGQPLDGNT-TGFHLITDNGgfFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIG 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  316 LFYILALFVVSLLISGRDERlttlsaTAASPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAEQGHA 395
Cdd:PRK15049 266 LFYVGSVVLLVMLLPWSAYQ------AGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSA 339
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  396 PKWFKYVDREGRPLLAMAFVLCFGALGYICESAQSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFkKQGKSYDevgy 475
Cdd:PRK15049 340 PSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAI-KEGKAAD---- 414
                        410       420
                 ....*....|....*....|....*....
gi 19115912  476 hSPFGIYGACYGAFIIILVFITEFYVSIF 504
Cdd:PRK15049 415 -VSFKLPGAPFTSWLTLLFLLSVLVLMAF 442
AA_permease_2 pfam13520
Amino acid permease;
112-496 2.73e-27

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 114.71  E-value: 2.73e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   112 GGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSWGFTLGWNYLASFLATYPLELITASICLQFWI 191
Cdd:pfam13520  28 GGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYVLGLASSASVAASYLLSAL 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   192 NINSGIW-------ITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFIICgividCGGVRTDHRGYIGATIFRKNA 264
Cdd:pfam13520 108 GPDLVPTtwltygiAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIII-----LGLVTADGGGFNLLSGEWHTF 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   265 FIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNpaKAFPKAVKQVFIRVSLFYILALFVVsLLISGRDErlTTLSATAA 344
Cdd:pfam13520 183 FPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILVNIAF-FGVVPDDE--IALSSGLG 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   345 SPFILALMDAKIRGLPHVLNAVILISVLTAANGITYTGSRTLHSMAEQGHAP--KWFKYVDREGRPLLAMAFVLCFGALG 422
Cdd:pfam13520 258 QVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKVNKFGSPIRAIILTAILSLIL 337
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 19115912   423 YICESAqSDTVFDWLLSISNLATLFVWLSINVSYIIYRLAFKKQGKSYdevgYHSPFGIYGACYGAFIIILVFI 496
Cdd:pfam13520 338 LLLFLL-SPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIP----GRWPVAIFGILFSLFLIVALFF 406
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
78-460 7.65e-11

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 64.84  E-value: 7.65e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912    78 KLKRTLTARHIQMIGIGGAIGTGVWVGSKNTLREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIH 157
Cdd:TIGR00906  25 KMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVG 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   158 PSWGFTLGWNYLASFL----------ATYPLELITASICLQFWININSG---------IWITVFIALLCFVNMFGVRGYG 218
Cdd:TIGR00906 105 ELWAFITGWNLILEYVigtaavarswSAYFDELLNKQIGQFRRTYFKLNydglaeypdFFAVCLILLLAVLLSFGVKESA 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   219 EVEFFVSSLKVMAMVGFIICGIvidcggVRTDHRGYIGATIFRKNAFI-HGFHGFCSVFSTAAFSYAGTEYIGIAASETK 297
Cdd:TIGR00906 185 WVNKIFTAINILVLLFVIIAGF------TKADVANWSITEEKGAGGFMpYGFTGVLSGAATCFFAFIGFDAIATTGEEVK 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   298 NPAKAFPKAVKQVFIRVSLFYILALFVVSLLISGR--DERlttlsataaSPFILALMDAKIRGLPHVLNAVILISVLTAA 375
Cdd:TIGR00906 259 NPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYllDPD---------APFPVAFEYVGWDPAKYIVAVGALCGMSTSL 329
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   376 NGITYTGSRTLHSMAEQGHAPKWFKYV-DREGRPLLAmafVLCFGALgyiceSAQSDTVFDW-----LLSISnlaTLFVW 449
Cdd:TIGR00906 330 LGGMFPLPRVIYAMARDGLLFKWLAQInSKTKTPINA---TVVSGAI-----AALMAFLFDLkalvdLLSIG---TLLAY 398
                         410
                  ....*....|.
gi 19115912   450 LSINVSYIIYR 460
Cdd:TIGR00906 399 SLVAACVLILR 409
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
101-396 5.76e-09

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 58.61  E-value: 5.76e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   101 VWVGSKNTLREGGAASV-LICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSWGFTLGWNYLASFL--ATYP 177
Cdd:TIGR00911  62 IFVSPKGVLKNAGSVGLaLIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVIRpgSQAV 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   178 LELITASICLQ------FWININSGIWITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFIICGIVIDCGGVRTDH 251
Cdd:TIGR00911 142 NALNFAIYILTpvfpdcEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVESL 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   252 RgyigatifRKNAFiHGFH----GFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVSLFYILALFVVSL 327
Cdd:TIGR00911 222 N--------PKNAF-EGTEtsagGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFT 292
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19115912   328 LISgrDERLTTLSATAASPFILALMDAKIrglphVLNAVILISVLTAANGITYTGSRTLHSMAEQGHAP 396
Cdd:TIGR00911 293 VLS--PEELLASLAVAVDFGERLLGVMSW-----AMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLP 354
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
109-495 2.04e-07

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 53.60  E-value: 2.04e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   109 LREGGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSW----GFTLGWNYLASFLATYPLELITAS 184
Cdd:TIGR00907  41 LSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPRQmpfaSWMTGWFNLAGQVAGTASTDLSVA 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   185 ICLQFWININSGIW---------ITVFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFI-ICGIVIDCGGVRTDHRGY 254
Cdd:TIGR00907 121 QLILGIVSLTTPGReyiptrwhiFGIMIGIHLIHALINSLPTKWLPRITSSAAYWSLLGFLtICITLLACKSPKFNDGKF 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   255 IGATIFRKNAFIHGFhGFCSVFSTAAFSYAGTEYIGIA--ASETKNPAKAFPKAVKQ---VFIRVSLFYILALFVV---- 325
Cdd:TIGR00907 201 VFTNFNNSTGGWKPG-GFAFLLGLLNPAWSMTGYDGTAhmAEEIENPEVVGPRAIIGavaIGIVTGFCFNIVLFFSmgdi 279
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   326 SLLISgrderlTTLSATAASPFILALmdAKIRGLPHVLNAVILISVLTAANGITyTGSRTLHSMAEQGHAPK---WFKYV 402
Cdd:TIGR00907 280 DSLIS------STTGQPIAQIFYNAL--GNKAGAIFLLCLILVTSFFCAITCMT-ANSRMIYAFSRDGGLPFsplWSRVN 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912   403 DREGRPLLA----MAFVLCFGALGYicesaQSDTVFDWLLSISNLAtlfvwlsINVSY---IIYRLAFKKQG--KSYDEV 473
Cdd:TIGR00907 351 PRTQVPLNAvwlsAVWIILIGLLGL-----GSSTAFQAIFSVCTVA-------LDVSYvipIICKLAKGRNTiaPGPFWL 418
                         410       420
                  ....*....|....*....|...
gi 19115912   474 GYHSPF-GIYGACYGAFIIILVF 495
Cdd:TIGR00907 419 GKYGFFvNAVAVAWTVFSSVLFS 441
frlA PRK11357
amino acid permease;
113-403 4.51e-04

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 42.92  E-value: 4.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  113 GAASVLICYSLVGSMVL---MTVYSlgELAVAFPINGSFHTYGTRFIHPSWGFTLGWnylASFLATYPLEL----ITASI 185
Cdd:PRK11357  40 GTPWLTVLAFVIGGLIVipqMCVYA--ELSTAYPENGADYVYLKNAGSRPLAFLSGW---ASFWANDAPSLsimaLAIVS 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  186 CLQFWININSGIWITVFIALLCF---VNMFGVRGYGEVEFFVSSLKVMAMVGFIICGIVIDCGGVrtdhrgyIGATIFRK 262
Cdd:PRK11357 115 NLGFLTPIDPLLGKFIAAGLIIAfmlLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAEN-------FAAPTTTA 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19115912  263 NAFIHGFHGFCSVFSTAAFSYAGTEYIGIAASETKNPAKAFPKAVKQVFIRVSLFYILalfvVSLLISGrderLTTLSAT 342
Cdd:PRK11357 188 IGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTL----LALVISG----LMPFDKL 259
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19115912  343 AASPFILALMDAKIRGLPHVLNAVI----LISVLTAANGITYTGSRTLHSMAEQGHAPKWFKYVD 403
Cdd:PRK11357 260 ANSETPISDALTWIPALGSTAGIFVaitaMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVH 324
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH