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Conserved domains on  [gi|19073969|ref|NP_584575|]
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proteasome regulatory particle base subunit RPN2 [Encephalitozoon cuniculi GB-M1]

Protein Classification

26S proteasome non-ATPase regulatory subunit 1; 3-phosphoglycerate dehydrogenase family protein( domain architecture ID 11473818)

26S proteasome non-ATPase regulatory subunit 1 (PSMD1), also known as RPN2, is a non-ATPase subunit of the 19S regulatory complex of the 26S proteasome which plays a critical role in the recognition of ubiquitinated protein substrates by the proteasome and is involved in the ATP-dependent unfolding and translocation of these substrates into the proteasome core for degradation| 3-phosphoglycerate dehydrogenase family protein may catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate; also contains 26S proteasome regulatory subunit RPN2 C-terminal domain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RPN2 COG5116
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, ...
1-786 0e+00

26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 227446 [Multi-domain]  Cd Length: 926  Bit Score: 1201.69  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969   1 MQTIRILPNIRALLRDGRESEAIDVINAHVDVVAPHIKDDLRYIK------SSDPK--TSLCLSKIYFVLEDYQQAIEYA 72
Cdd:COG5116   3 MTTARILPALLAELRDGRESEALDVINAHVDQLWPEISDDLRYIEalydddSFDPRemAALCLSKVYYVLGEYQQAIEYA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969  73 LRAGD-LLVDDGSFYYTSIVY-------HMMDSADIGGD----DRIRDFVLKVIGAEDVDDSLIGYLFSIKAYGLLKEAL 140
Cdd:COG5116  83 LRAGDrFLVDDGSFYYETIVYksiemyvHMMDSAYIGGDkdiiDRILDFVLEVIGAKCVDDSEIGYLLGIAAEGLRLDII 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 141 VKYISDGNDCR---RLLDLLISLGEEEGCLKEIYGMLAEIGPGK-KPFIFYVIDAYFYLEDVEKVKALIERLVKEDILLC 216
Cdd:COG5116 163 EKYLSDGNDCDiinYLLDLAITLVEEEGFRKEILRMLAEIGPGKpKPDYFYVIKAVVYLNDAEKAKALIEKLVKENDLLL 242
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 217 YD-VAFYTEDNYSPEIE-------VA---DQRVMSILSGEFKKKILGAFLLEKNLTSFKFLE----SIAR--TRTHYLG- 278
Cdd:COG5116 243 YAqVAFDLEDSASQEILeilvtelVAqgyDQAVMSILSGEFTKKYLGAFLLEKNNTDFKFLNssksSLARkfSRFHYAVs 322
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 279 LANSLMNLGTSNDTLYRNNADIFGQSSEWAKFSEVASIGMIHLFNSNP-YEILKNYLPSEVS---QKEGGALMALGLIKA 354
Cdd:COG5116 323 LANSFMNLGTSNDSFYRNNLDWLGKASNWAKFTATASLGVIHLGNSNPgYEILKPYLPSEVAssrQKEGGALYALGLIKA 402
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 355 GtFSEEDTEYLL-YFLDTEDTLTPELAYGVCLGLGLINMGSANREILNKLKELSKVDRTLLVEASVYGMGMLGLNSWSVE 433
Cdd:COG5116 403 G-FGREDTEYLLeYFLDTEDELTPELAYGVCLGIGLINMGSANREIYEKLKELLKNDRALLGEAAVYGMGLLMLGTWSVE 481
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 434 LLEDLRTIAGETEFERVKRAVGISFSLVLMFSEEMFYDecnasngdfknYINELLYDKDSIMRANGVLSLGSAFVGTGRL 513
Cdd:COG5116 482 AIEDMRTYAGETQHERIKRGLGIGFALILYGRQEMADD-----------YINELLYDKDSILRYNGVFSLALAYVGTGNL 550
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 514 GVISTLLPY-INDGDDDVKRAAVIAIGLVCCDDRDLLVGTLEPLSENHNFFVRAAVAVVLGLFLSGTGDKVCTNILEALM 592
Cdd:COG5116 551 GVVSTLLHYaVSDGNDDVRRAAVIALGFVCCDDRDLLVGTVELLSESHNFHVRAGVAVALGIACAGTGDKVATDILEALM 630
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 593 YDTNSLVRQSACIGVGFITMQCNPELVPNYKRIIEKLNRLIVDKKESGAVELGAVLGRGLSEGGGRNIVFSVRNMSGITS 672
Cdd:COG5116 631 YDTNDFVRQSAMIAVGMILMQCNPELNPNVKRIIKKFNRVIVDKHESGLAKLGAVLAQGISEAGGRNVTISLRNATGILS 710
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 673 ADRIAGAVLFLHYWYWHPLISMVSLCALPTTV-----------FCFNEDLEEEEIEIP--------TSSRYNNLLICLPD 733
Cdd:COG5116 711 ADRIVGLVLFLQYWYWFPLIHFVSLSFLPTTVigirgsqaipkFCFNEDLEEEEFEYPrmyeeasgKSVRKVNTAVLSTT 790
                       810       820       830       840       850
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 19073969 734 IKKARRFKQKPKE----DKEIVIESPSVLTFGSRCTIKQREECGIDAPAILFVKKKK 786
Cdd:COG5116 791 IKAAARAKQKPKEkgpnDKEIKIESPSVETEGERCTIKQREEKGIDAPAILNVKKKK 847
 
Name Accession Description Interval E-value
RPN2 COG5116
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, ...
1-786 0e+00

26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227446 [Multi-domain]  Cd Length: 926  Bit Score: 1201.69  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969   1 MQTIRILPNIRALLRDGRESEAIDVINAHVDVVAPHIKDDLRYIK------SSDPK--TSLCLSKIYFVLEDYQQAIEYA 72
Cdd:COG5116   3 MTTARILPALLAELRDGRESEALDVINAHVDQLWPEISDDLRYIEalydddSFDPRemAALCLSKVYYVLGEYQQAIEYA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969  73 LRAGD-LLVDDGSFYYTSIVY-------HMMDSADIGGD----DRIRDFVLKVIGAEDVDDSLIGYLFSIKAYGLLKEAL 140
Cdd:COG5116  83 LRAGDrFLVDDGSFYYETIVYksiemyvHMMDSAYIGGDkdiiDRILDFVLEVIGAKCVDDSEIGYLLGIAAEGLRLDII 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 141 VKYISDGNDCR---RLLDLLISLGEEEGCLKEIYGMLAEIGPGK-KPFIFYVIDAYFYLEDVEKVKALIERLVKEDILLC 216
Cdd:COG5116 163 EKYLSDGNDCDiinYLLDLAITLVEEEGFRKEILRMLAEIGPGKpKPDYFYVIKAVVYLNDAEKAKALIEKLVKENDLLL 242
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 217 YD-VAFYTEDNYSPEIE-------VA---DQRVMSILSGEFKKKILGAFLLEKNLTSFKFLE----SIAR--TRTHYLG- 278
Cdd:COG5116 243 YAqVAFDLEDSASQEILeilvtelVAqgyDQAVMSILSGEFTKKYLGAFLLEKNNTDFKFLNssksSLARkfSRFHYAVs 322
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 279 LANSLMNLGTSNDTLYRNNADIFGQSSEWAKFSEVASIGMIHLFNSNP-YEILKNYLPSEVS---QKEGGALMALGLIKA 354
Cdd:COG5116 323 LANSFMNLGTSNDSFYRNNLDWLGKASNWAKFTATASLGVIHLGNSNPgYEILKPYLPSEVAssrQKEGGALYALGLIKA 402
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 355 GtFSEEDTEYLL-YFLDTEDTLTPELAYGVCLGLGLINMGSANREILNKLKELSKVDRTLLVEASVYGMGMLGLNSWSVE 433
Cdd:COG5116 403 G-FGREDTEYLLeYFLDTEDELTPELAYGVCLGIGLINMGSANREIYEKLKELLKNDRALLGEAAVYGMGLLMLGTWSVE 481
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 434 LLEDLRTIAGETEFERVKRAVGISFSLVLMFSEEMFYDecnasngdfknYINELLYDKDSIMRANGVLSLGSAFVGTGRL 513
Cdd:COG5116 482 AIEDMRTYAGETQHERIKRGLGIGFALILYGRQEMADD-----------YINELLYDKDSILRYNGVFSLALAYVGTGNL 550
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 514 GVISTLLPY-INDGDDDVKRAAVIAIGLVCCDDRDLLVGTLEPLSENHNFFVRAAVAVVLGLFLSGTGDKVCTNILEALM 592
Cdd:COG5116 551 GVVSTLLHYaVSDGNDDVRRAAVIALGFVCCDDRDLLVGTVELLSESHNFHVRAGVAVALGIACAGTGDKVATDILEALM 630
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 593 YDTNSLVRQSACIGVGFITMQCNPELVPNYKRIIEKLNRLIVDKKESGAVELGAVLGRGLSEGGGRNIVFSVRNMSGITS 672
Cdd:COG5116 631 YDTNDFVRQSAMIAVGMILMQCNPELNPNVKRIIKKFNRVIVDKHESGLAKLGAVLAQGISEAGGRNVTISLRNATGILS 710
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 673 ADRIAGAVLFLHYWYWHPLISMVSLCALPTTV-----------FCFNEDLEEEEIEIP--------TSSRYNNLLICLPD 733
Cdd:COG5116 711 ADRIVGLVLFLQYWYWFPLIHFVSLSFLPTTVigirgsqaipkFCFNEDLEEEEFEYPrmyeeasgKSVRKVNTAVLSTT 790
                       810       820       830       840       850
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 19073969 734 IKKARRFKQKPKE----DKEIVIESPSVLTFGSRCTIKQREECGIDAPAILFVKKKK 786
Cdd:COG5116 791 IKAAARAKQKPKEkgpnDKEIKIESPSVETEGERCTIKQREEKGIDAPAILNVKKKK 847
HEAT_2 pfam13646
HEAT repeats; This family includes multiple HEAT repeats.
484-573 1.99e-03

HEAT repeats; This family includes multiple HEAT repeats.


Pssm-ID: 433376 [Multi-domain]  Cd Length: 88  Bit Score: 38.09  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969   484 INELLYDKDSIMRANGVLSLGSAfvgtGRLGVISTLLPYINDGDDDVKRAAVIAIGLVccDDRDLLVGTLEPLSENHNFF 563
Cdd:pfam13646   5 LQALLRDPDPEVRAAAIRALGRI----GDPEAVPALLELLKDEDPAVRRAAAEALGKI--GDPEALPALLELLRDDDDDV 78
                          90
                  ....*....|
gi 19073969   564 VRAAVAVVLG 573
Cdd:pfam13646  79 VRAAAAEALA 88
 
Name Accession Description Interval E-value
RPN2 COG5116
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, ...
1-786 0e+00

26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227446 [Multi-domain]  Cd Length: 926  Bit Score: 1201.69  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969   1 MQTIRILPNIRALLRDGRESEAIDVINAHVDVVAPHIKDDLRYIK------SSDPK--TSLCLSKIYFVLEDYQQAIEYA 72
Cdd:COG5116   3 MTTARILPALLAELRDGRESEALDVINAHVDQLWPEISDDLRYIEalydddSFDPRemAALCLSKVYYVLGEYQQAIEYA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969  73 LRAGD-LLVDDGSFYYTSIVY-------HMMDSADIGGD----DRIRDFVLKVIGAEDVDDSLIGYLFSIKAYGLLKEAL 140
Cdd:COG5116  83 LRAGDrFLVDDGSFYYETIVYksiemyvHMMDSAYIGGDkdiiDRILDFVLEVIGAKCVDDSEIGYLLGIAAEGLRLDII 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 141 VKYISDGNDCR---RLLDLLISLGEEEGCLKEIYGMLAEIGPGK-KPFIFYVIDAYFYLEDVEKVKALIERLVKEDILLC 216
Cdd:COG5116 163 EKYLSDGNDCDiinYLLDLAITLVEEEGFRKEILRMLAEIGPGKpKPDYFYVIKAVVYLNDAEKAKALIEKLVKENDLLL 242
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 217 YD-VAFYTEDNYSPEIE-------VA---DQRVMSILSGEFKKKILGAFLLEKNLTSFKFLE----SIAR--TRTHYLG- 278
Cdd:COG5116 243 YAqVAFDLEDSASQEILeilvtelVAqgyDQAVMSILSGEFTKKYLGAFLLEKNNTDFKFLNssksSLARkfSRFHYAVs 322
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 279 LANSLMNLGTSNDTLYRNNADIFGQSSEWAKFSEVASIGMIHLFNSNP-YEILKNYLPSEVS---QKEGGALMALGLIKA 354
Cdd:COG5116 323 LANSFMNLGTSNDSFYRNNLDWLGKASNWAKFTATASLGVIHLGNSNPgYEILKPYLPSEVAssrQKEGGALYALGLIKA 402
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 355 GtFSEEDTEYLL-YFLDTEDTLTPELAYGVCLGLGLINMGSANREILNKLKELSKVDRTLLVEASVYGMGMLGLNSWSVE 433
Cdd:COG5116 403 G-FGREDTEYLLeYFLDTEDELTPELAYGVCLGIGLINMGSANREIYEKLKELLKNDRALLGEAAVYGMGLLMLGTWSVE 481
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 434 LLEDLRTIAGETEFERVKRAVGISFSLVLMFSEEMFYDecnasngdfknYINELLYDKDSIMRANGVLSLGSAFVGTGRL 513
Cdd:COG5116 482 AIEDMRTYAGETQHERIKRGLGIGFALILYGRQEMADD-----------YINELLYDKDSILRYNGVFSLALAYVGTGNL 550
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 514 GVISTLLPY-INDGDDDVKRAAVIAIGLVCCDDRDLLVGTLEPLSENHNFFVRAAVAVVLGLFLSGTGDKVCTNILEALM 592
Cdd:COG5116 551 GVVSTLLHYaVSDGNDDVRRAAVIALGFVCCDDRDLLVGTVELLSESHNFHVRAGVAVALGIACAGTGDKVATDILEALM 630
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 593 YDTNSLVRQSACIGVGFITMQCNPELVPNYKRIIEKLNRLIVDKKESGAVELGAVLGRGLSEGGGRNIVFSVRNMSGITS 672
Cdd:COG5116 631 YDTNDFVRQSAMIAVGMILMQCNPELNPNVKRIIKKFNRVIVDKHESGLAKLGAVLAQGISEAGGRNVTISLRNATGILS 710
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 673 ADRIAGAVLFLHYWYWHPLISMVSLCALPTTV-----------FCFNEDLEEEEIEIP--------TSSRYNNLLICLPD 733
Cdd:COG5116 711 ADRIVGLVLFLQYWYWFPLIHFVSLSFLPTTVigirgsqaipkFCFNEDLEEEEFEYPrmyeeasgKSVRKVNTAVLSTT 790
                       810       820       830       840       850
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 19073969 734 IKKARRFKQKPKE----DKEIVIESPSVLTFGSRCTIKQREECGIDAPAILFVKKKK 786
Cdd:COG5116 791 IKAAARAKQKPKEkgpnDKEIKIESPSVETEGERCTIKQREEKGIDAPAILNVKKKK 847
RPN1 COG5110
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, ...
232-536 5.02e-11

26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227441 [Multi-domain]  Cd Length: 881  Bit Score: 66.49  E-value: 5.02e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 232 EVADQRVMSILSGEFKKKILGAFLLEKNLTSFKFLESIARTRTHY------------------LGLANSLMNLGTSNDTL 293
Cdd:COG5110 301 EASDEEEKDILSNGYLSDHFRYLGKELNLDKPKVPEDILKGHLKYdkdtrqlagigsanqnlaMGFVNDPINLGYENDSL 380
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 294 YRNNADIFGQSSEWAKFSEVASIGMIHLFNSNP-YEILKNYLPSEVSQKEGGALMALGLIKAGTFSEEDTEYLLY--FLD 370
Cdd:COG5110 381 IPLDDEWIYKCKVPGLISAFASIGVIESWNSDKgLETLDKYLYADESYRKAGALLGIGLSGLRVFEERPPALALLsnYLQ 460
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 371 TEDTltpELAYGVCLGLGLINMGSANREILNKLKELSkVDRTLLVEASVYGMGMLGLnSWSVELLEDLRTIAGETEFERV 450
Cdd:COG5110 461 SSSS---KHVIAAILGLGAAFSGTQAEEVLELLQPIM-FSTDSPIEVVFFASLTLGS-VFVGTCNGDLTSLILQTFVERG 535
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 451 KRAVGISFSLVLMFSEEMFYDECNASNGDFKNYINELlydKDSIMRANGVLSLGSAFVGTGRLGVISTLLPYIN--DGDD 528
Cdd:COG5110 536 KIESETQWFRFLALGLASLFYGRKDQVDDVEETIMAI---EGALSKHEEILVKGCQYVGTGDVLVIQSLLHVKDefTGDT 612

                ....*...
gi 19073969 529 DVKRAAVI 536
Cdd:COG5110 613 LKNEEALI 620
HEAT COG1413
HEAT repeat [General function prediction only];
486-603 5.39e-07

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 49.63  E-value: 5.39e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 486 ELLYDKDSIMRANGVLSLGSafvgTGRLGVISTLLPYINDGDDDVKRAAVIAIGLVCCDDrdlLVGTLEPLSENHNFFVR 565
Cdd:COG1413  23 AALADEDPDVRAAAARALGR----LGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPE---AVPALIAALKDEDPEVR 95
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 19073969 566 AAVAVVLGLFlsgtGDKVCTNILEALMYDTNSLVRQSA 603
Cdd:COG1413  96 RAAAEALGRL----GDPAAVPALLEALKDPDWEVRRAA 129
HEAT COG1413
HEAT repeat [General function prediction only];
496-620 5.71e-07

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 49.24  E-value: 5.71e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 496 RANGVLSLGSAfvgtGRLGVISTLLPYINDGDDDVKRAAVIAIGLVCCDDrdlLVGTLEPLSENHNFFVRAAVAVVLGLF 575
Cdd:COG1413   2 RRAAARALGRL----GDPAAVPALIAALADEDPDVRAAAARALGRLGDPR---AVPALLEALKDPDPEVRAAAAEALGRI 74
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 19073969 576 lsgtGDKVCTNILEALMYDTNSLVRQSACIGVGFITmqcNPELVP 620
Cdd:COG1413  75 ----GDPEAVPALIAALKDEDPEVRRAAAEALGRLG---DPAAVP 112
HEAT COG1413
HEAT repeat [General function prediction only];
483-573 6.90e-06

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 46.16  E-value: 6.90e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969 483 YINELLYDKDSIMRANGVLSLGSafvgTGRLGVISTLLPYINDGDDDVKRAAVIAIGLVccdDRDLLVGTLEPLSENHNF 562
Cdd:COG1413  51 ALLEALKDPDPEVRAAAAEALGR----IGDPEAVPALIAALKDEDPEVRRAAAEALGRL---GDPAAVPALLEALKDPDW 123
                        90
                ....*....|.
gi 19073969 563 FVRAAVAVVLG 573
Cdd:COG1413 124 EVRRAAARALG 134
HEAT_2 pfam13646
HEAT repeats; This family includes multiple HEAT repeats.
484-573 1.99e-03

HEAT repeats; This family includes multiple HEAT repeats.


Pssm-ID: 433376 [Multi-domain]  Cd Length: 88  Bit Score: 38.09  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19073969   484 INELLYDKDSIMRANGVLSLGSAfvgtGRLGVISTLLPYINDGDDDVKRAAVIAIGLVccDDRDLLVGTLEPLSENHNFF 563
Cdd:pfam13646   5 LQALLRDPDPEVRAAAIRALGRI----GDPEAVPALLELLKDEDPAVRRAAAEALGKI--GDPEALPALLELLRDDDDDV 78
                          90
                  ....*....|
gi 19073969   564 VRAAVAVVLG 573
Cdd:pfam13646  79 VRAAAAEALA 88
PC_rep pfam01851
Proteasome/cyclosome repeat;
498-532 8.09e-03

Proteasome/cyclosome repeat;


Pssm-ID: 460361 [Multi-domain]  Cd Length: 35  Bit Score: 34.70  E-value: 8.09e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 19073969   498 NGVLSLGSAFVGTGRLGVISTLLPYINDGDDDVKR 532
Cdd:pfam01851   1 GAALALGLIHAGSGNEEALDLLLPYLSDTSAESRA 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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