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Conserved domains on  [gi|18859287|ref|NP_571432|]
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parathyroid hormone/parathyroid hormone-related peptide receptor precursor [Danio rerio]

Protein Classification

hormone receptor( domain architecture ID 12039877)

hormone receptor is a class B G-protein coupled receptor (GPCR) for hormones and/or hormone-related peptides; contains a large N-terminal extracellular domain that plays a critical role in peptide hormone recognition; GPCRs transmit physiological signals from the outside of the cell to the inside via G proteins by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
141-430 0e+00

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


:

Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 594.23  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKS 220
Cdd:cd15984   1 FDRLYLIYTVGYSISLGSLTVAVLILGYFRRLHCTRNYIHMHLFLSFMLRAVSIFVKDAVLYSGSALEEMERITEEDLKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAPPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15984  81 ITEAPPADKAQFVGCKVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFTLFGWGLPAVFVTIWASVRATL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 380
Cdd:cd15984 161 ADTGCWDLSAGNLKWIIQVPILAAIVVNFILFINIVRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 18859287 381 MPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15984 241 MPYTEVSGILWQVQMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIKKSWSR 290
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
60-125 3.21e-24

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


:

Pssm-ID: 397086  Cd Length: 64  Bit Score: 95.51  E-value: 3.21e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18859287    60 EGSCLPEWDGILCWPEGVPGKMVSTSCPEYIYDFNHKGHAYRRCDLNGTWELASHnnktwANYSEC 125
Cdd:pfam02793   1 GLGCPRTWDGILCWPRTPAGETVEVPCPDYFSGFDPRGNASRNCTEDGTWSEHPP-----SNYSNC 61
 
Name Accession Description Interval E-value
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
141-430 0e+00

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 594.23  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKS 220
Cdd:cd15984   1 FDRLYLIYTVGYSISLGSLTVAVLILGYFRRLHCTRNYIHMHLFLSFMLRAVSIFVKDAVLYSGSALEEMERITEEDLKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAPPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15984  81 ITEAPPADKAQFVGCKVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFTLFGWGLPAVFVTIWASVRATL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 380
Cdd:cd15984 161 ADTGCWDLSAGNLKWIIQVPILAAIVVNFILFINIVRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 18859287 381 MPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15984 241 MPYTEVSGILWQVQMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIKKSWSR 290
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
141-409 3.81e-103

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 309.98  E-value: 3.81e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287   141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEmeritvedlks 220
Cdd:pfam00002   1 ALSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQDLDH----------- 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287   221 iteappankTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASV--RA 298
Cdd:pfam00002  70 ---------CSWVGCKVVAVFLHYFFLANFFWMLVEGLYLYTLLVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVdpKG 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287   299 TLADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRqQYRKLLKSTLVLMPLFGVHYI-- 376
Cdd:pfam00002 141 YGEDDGCWLSNENGLWWIIRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDLK-QYRRLAKSTLLLLPLLGITWVfg 219
                         250       260       270
                  ....*....|....*....|....*....|...
gi 18859287   377 VFMAMPYTevsgVLWQIQMHYEMLFNSVQGFFV 409
Cdd:pfam00002 220 LFAFNPEN----TLRVVFLYLFLILNSFQGFFV 248
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
60-125 3.21e-24

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 95.51  E-value: 3.21e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18859287    60 EGSCLPEWDGILCWPEGVPGKMVSTSCPEYIYDFNHKGHAYRRCDLNGTWELASHnnktwANYSEC 125
Cdd:pfam02793   1 GLGCPRTWDGILCWPRTPAGETVEVPCPDYFSGFDPRGNASRNCTEDGTWSEHPP-----SNYSNC 61
HormR smart00008
Domain present in hormone receptors;
59-125 3.20e-21

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 87.57  E-value: 3.20e-21
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18859287     59 SEGSCLPEWDGILCWPEGVPGKMVSTSCPEYIYDFNHKGHAYRRCDLNGTWELashnnkTWANYSEC 125
Cdd:smart00008   1 TDLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGFSYKTGASRNCTENGGWSP------PFPNYSNC 61
 
Name Accession Description Interval E-value
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
141-430 0e+00

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 594.23  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKS 220
Cdd:cd15984   1 FDRLYLIYTVGYSISLGSLTVAVLILGYFRRLHCTRNYIHMHLFLSFMLRAVSIFVKDAVLYSGSALEEMERITEEDLKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAPPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15984  81 ITEAPPADKAQFVGCKVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFTLFGWGLPAVFVTIWASVRATL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 380
Cdd:cd15984 161 ADTGCWDLSAGNLKWIIQVPILAAIVVNFILFINIVRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 18859287 381 MPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15984 241 MPYTEVSGILWQVQMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIKKSWSR 290
7tmB1_PTHR cd15265
parathyroid hormone receptors, member of the class B family of seven-transmembrane G ...
141-430 0e+00

parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to a G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. On the other hand, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. Moreover, the PTH3R is more closely related to the PTH1R than PTH2R. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. The PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320393 [Multi-domain]  Cd Length: 289  Bit Score: 577.02  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKS 220
Cdd:cd15265   1 FERLYLIYTVGYSISLVSLTVAVFILGYFRRLHCTRNYIHMHLFVSFMLRAVSIFVKDAVLYSGSGLDELERPSMEDLKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAPPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15265  81 IVEAPPVDKSQYVGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMAFFSDKKYLWGFTLIGWGFPAVFVIPWASVRATL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 380
Cdd:cd15265 161 ADTRCWDLSAGNYKWIYQVPILAAIVVNFILFLNIVRVLATKLRETNAGRCDTRQQYRKLAKSTLVLIPLFGVHYIVFMG 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 18859287 381 MPYTEVsGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15265 241 MPYTEV-GLLWQIRMHYELFFNSFQGFFVAIIYCFCNGEVQAEIKKRWER 289
7tmB1_PTH3R cd15983
parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G ...
141-430 1.34e-169

parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 3 receptor (PTH3R), one of the three subtypes of PTH receptor family, is found in chicken and fish, but it is absent in mammals. On the other hand, the PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH1R is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. Conversely, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320649 [Multi-domain]  Cd Length: 285  Bit Score: 480.96  E-value: 1.34e-169
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKS 220
Cdd:cd15983   1 FERLHLMYTIGYSISLAALLVAVCILCYFKRLHCTRNYIHIHLFASFICRAGSIFVKDAVLYSGTNEGEALDEKIEFGLS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 iteapPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15983  81 -----PGTRLQWVGCKVTVTLFLYFLATNHYWILVEGLYLHSLIFMAFLSDKNYLWALTIIGWGLPAVFVSVWASVRVSL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 380
Cdd:cd15983 156 ADTQCWDLSAGNLKWIYQVPILAAILVNFFLFLNIVRVLASKLWETNTGKLDPRQQYRKLLKSTLVLMPLFGVHYVLFMA 235
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 18859287 381 MPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15983 236 MPYTDVTGLLWQIQMHYEMLFNSSQGFFVAFIYCFCNGEVQAEIKKAWLR 285
7tmB1_PTH2R cd15982
parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G ...
141-430 1.80e-158

parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 2 receptor (PTH2R), one of the three subtypes of PTH receptor family, is found in mammals and fish, but not in chicken or frog. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39) but not by PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs. These results suggest that TIP-39 is a natural ligand for PTH2R. Conversely, PTH1R is activated by PTH and PTHrP, but not by TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320648 [Multi-domain]  Cd Length: 289  Bit Score: 452.85  E-value: 1.80e-158
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKS 220
Cdd:cd15982   1 FERLYIMYTVGYSISFSSLAVAIFIIGYFRRLHCTRNYIHMHLFVSFMLRAASIFVKDKVVHTHIGVKELDAVLMNDFQN 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAPPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15982  81 AVDAPPVDKSQYVGCKIAVVMFIYFLATNYYWILVEGLYLHSLIFVAFFSDTKYLWGFTLIGWGFPAVFVAAWAVVRATL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 380
Cdd:cd15982 161 ADARCWELSAGDIKWIYQAPILAAIGLNFILFLNTVRVLATKIWETNAVGYDTRKQYRKLAKSTLVLVLVFGVHYIVFVC 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 18859287 381 MPYTeVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15982 241 LPHT-FTGLGWEIRMHCELFFNSFQGFFVSIIYCYCNGEVQTEIKKTWTR 289
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
141-430 6.93e-116

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 343.82  E-value: 6.93e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSgsalqemeritveDLKS 220
Cdd:cd15041   1 LLVVYYIYLVGYSLSLVALLPAIVIFLYFRSLRCTRIRLHINLFLSFILRAVFWIIWDLLVVY-------------DRLT 67
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAPPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15041  68 SSGVETVLMQNPVGCKLLSVLKRYFKSANYFWMLCEGLYLHRLIVVAFFSEPSSLKLYYAIGWGLPLVIVVIWAIVRALL 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECW-DLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRcdtRQQYRKLLKSTLVLMPLFGVHYIVFM 379
Cdd:cd15041 148 SNESCWiSYNNGHYEWILYGPNLLALLVNLFFLINILRILLTKLRSHPNAE---PSNYRKAVKATLILIPLFGIQYLLTI 224
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 18859287 380 AMPYTEVSGvlWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15041 225 YRPPDGSEG--ELVYEYFNAILNSSQGFFVAVIYCFLNGEVQSELKRKWSR 273
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
141-409 3.81e-103

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 309.98  E-value: 3.81e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287   141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEmeritvedlks 220
Cdd:pfam00002   1 ALSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQDLDH----------- 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287   221 iteappankTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASV--RA 298
Cdd:pfam00002  70 ---------CSWVGCKVVAVFLHYFFLANFFWMLVEGLYLYTLLVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVdpKG 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287   299 TLADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRqQYRKLLKSTLVLMPLFGVHYI-- 376
Cdd:pfam00002 141 YGEDDGCWLSNENGLWWIIRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDLK-QYRRLAKSTLLLLPLLGITWVfg 219
                         250       260       270
                  ....*....|....*....|....*....|...
gi 18859287   377 VFMAMPYTevsgVLWQIQMHYEMLFNSVQGFFV 409
Cdd:pfam00002 220 LFAFNPEN----TLRVVFLYLFLILNSFQGFFV 248
7tmB1_PTH-R_related cd15272
invertebrate parathyroid hormone-related receptors, member of the class B family of ...
142-430 4.20e-100

invertebrate parathyroid hormone-related receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes parathyroid hormone (PTH)-related receptors found in invertebrates such as mollusks and annelid worms. The PTH family receptors are members of the B1 subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. The parathyroid hormone type 1 receptor (PTH1R) is found in all vertebrate species and is activated by two polypeptide ligands: parathyroid hormone (PTH), an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)- protein that in turn activates adenylyl cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple signaling pathways.


Pssm-ID: 320400 [Multi-domain]  Cd Length: 285  Bit Score: 303.54  E-value: 4.20e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 142 DRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALqemERITVEDLKSI 221
Cdd:cd15272   2 PSIRLMYNIGYGLSLVSLLIAVIIMLYFKKLHCPRNTIHINLFVSFILRAVLSFIKENLLVQGVGF---PGDVYYDSNGV 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 222 TEAPPanKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLA 301
Cdd:cd15272  79 IEFKD--EGSHWECKLFFTMFNYILGANYMWIFVEGLYLHMLIFVAVFSENSRVKWYILLGWLSPLLFVLPWVFVRATLE 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 302 DTECWD--LSAGNLkWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDtRQQYRKLLKSTLVLMPLFGVHYIVFM 379
Cdd:cd15272 157 DTLCWNtnTNKGYF-WIIRGPIVISIAINFLFFINIVRVLFTKLKASNTQESR-PFRYRKLAKSTLVLIPLFGVHYMVFV 234
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 18859287 380 AMPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15272 235 VLPDSMSSDEAELVWLYFEMFFNSFQGFIVALLFCFLNGEVQSEIKKKWQR 285
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
141-430 8.15e-100

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 302.43  E-value: 8.15e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSalqemeritvedlkS 220
Cdd:cd15930   1 YLTVKIIYTVGYSLSLTSLTTAMIILCLFRKLHCTRNYIHMNLFVSFILRAIAVFIKDAVLFSSE--------------D 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAPPANktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15930  67 VDHCFVST----VGCKASMVFFQYCVMANFFWLLVEGLYLHTLLVISFFSERRYFWWYVLIGWGAPTVFVTVWIVARLYF 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGN-LKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTrQQYRKLLKSTLVLMPLFGVHYIVFM 379
Cdd:cd15930 143 EDTGCWDINDESpYWWIIKGPILISILVNFVLFINIIRILLQKLRSPDIGGNES-SQYKRLARSTLLLIPLFGIHYIVFA 221
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 18859287 380 AMPytevSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15930 222 FFP----ENISLGIRLYFELCLGSFQGFVVAVLYCFLNGEVQAEIKRKWRS 268
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
141-428 6.79e-98

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 297.41  E-value: 6.79e-98
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVedlks 220
Cdd:cd15271   1 FSTVKLLYTVGYGTSLTSLITAVLIFCTFRKLHCTRNYIHINLFVSFILRALAVFIKDAVLFADESVDHCTMSTV----- 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 iteappanktqfiGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15271  76 -------------ACKAAVTFFQFCVLANFFWLLVEGMYLQTLLLLTFTSDRKYFWWYILIGWGAPSVTVTVWVLTRLQY 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTrQQYRKLLKSTLVLMPLFGVHYIVFMA 380
Cdd:cd15271 143 DNRGCWDDLESRIWWIIKTPILLSVFVNFLIFINVIRILVQKLKSPDVGGNDT-SHYMRLAKSTLLLIPLFGVHYVVFAF 221
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 18859287 381 MPytEVSGVlwQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAW 428
Cdd:cd15271 222 FP--EHVGV--EARLYFELVLGSFQGFIVALLYCFLNGEVQAEIKKRL 265
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
141-430 2.46e-96

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 293.57  E-value: 2.46e-96
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGsalqemERITVEDLKS 220
Cdd:cd15275   1 FMYLKTMYTVGYSVSLVSLAIALAILCSFRRLHCTRNYIHMQLFLSFILRAISIFIKDAVLFSS------EDDNHCDIYT 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 iteappanktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15275  75 ------------VGCKVAMVFSNYCIMANYSWLLVEGLYLHSLLSISFFSERKHLWWYIALGWGSPLIFIISWAIARYLH 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSA-GNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTrQQYRKLLKSTLVLMPLFGVHYIVFM 379
Cdd:cd15275 143 ENEGCWDTRRnAWIWWIIRGPVILSIFVNFILFLNILRILMRKLRAPDMRGNEF-SQYKRLAKSTLLLIPLFGLHYILFA 221
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 18859287 380 AMPYtEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15275 222 FFPE-DVSSGTMEIWLFFELALGSFQGFVVAVLYCFLNGEVQLEIQRKWRR 271
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
148-430 1.04e-93

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 286.75  E-value: 1.04e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 148 YTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYsgsalqemERITVEDLKsiteappa 227
Cdd:cd15269   8 YTIGHSLSLISLTAAMIILCLFRKLHCTRNYIHMHLFMSFILRAIAVFIKDAVLF--------ESGEEDHCS-------- 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 228 nkTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTECWD 307
Cdd:cd15269  72 --VASVGCKAAMVFFQYCIMANFFWLLVEGLYLHTLLAVSFFSERKYFWWYILIGWGAPSVFITAWSVARIYFEDVGCWD 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 308 -LSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTrQQYRKLLKSTLVLMPLFGVHYIVFMAMPytev 386
Cdd:cd15269 150 tIIESLLWWIIKTPILVSILVNFILFICIIRILVQKLHSPDIGRNES-SQYSRLAKSTLLLIPLFGIHYIMFAFFP---- 224
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 18859287 387 SGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15269 225 DNFKAEVKLVFELILGSFQGFVVAVLYCFLNGEVQAELKRKWRR 268
7tmB1_GlucagonR-like cd15929
glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G ...
143-430 6.88e-93

glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents the glucagon receptor family of G protein-coupled receptors, which includes glucagon receptor (GCGR), glucagon-like peptide-1 receptor (GLP1R), GLP2R, and closely related receptors. These receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341353 [Multi-domain]  Cd Length: 279  Bit Score: 285.10  E-value: 6.88e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 143 RLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVL---YSGSALQEMERITVEDLK 219
Cdd:cd15929   3 SLQVMYTVGYSLSLAALVLALAILLGLRKLHCTRNYIHANLFASFILRALSVLVKDALLprrYSQKGDQDLWSTLLSNQA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 220 SiteappanktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRAT 299
Cdd:cd15929  83 S------------LGCRVAQVLMQYCVAANYYWLLVEGLYLHTLLVLAVFSERSIFRLYLLLGWGAPVLFVVPWGIVKYL 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 300 LADTECWDLSaGNLK--WIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRqqYRkLLKSTLVLMPLFGVHYIV 377
Cdd:cd15929 151 YENTGCWTRN-DNMAywWIIRLPILLAILINFFIFVRILKILVSKLRANQMCKTDYK--FR-LAKSTLTLIPLLGVHEVV 226
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 18859287 378 FMAMPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15929 227 FAFVTDEQARGTLRFIKLFFELFLSSFQGLLVAVLYCFANKEVQSELRKKWHR 279
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
141-430 1.21e-87

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 270.90  E-value: 1.21e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEdlks 220
Cdd:cd15270   1 FSTVKIIYTVGYSISIVSLCVAVAILVAFRRLHCPRNYIHIQLFFTFILKAIAVFIKDAALFQEDDTDHCSMSTVL---- 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 iteappanktqfigCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15270  77 --------------CKVSVVFCHYCVMTNFFWLLVEAVYLNCLLASSFPRGKRYFWWLVLLGWGLPTLCTGTWILCKLYF 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGN-LKWIVQIPILTAIVVNFLLFLNIIRVLATKLrETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFM 379
Cdd:cd15270 143 EDTECWDINNDSpYWWIIKGPIVISVGVNFLLFLNIIRILLKKL-DPRQINFNNSAQYRRLSKSTLLLIPLFGTHYIIFN 221
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 18859287 380 AMP-YTEVsgvlwQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15270 222 FLPdYAGL-----GIRLYLELCLGSFQGFIVAVLYCFLNQEVQTEISRKWYG 268
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
147-428 1.04e-85

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 266.28  E-value: 1.04e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 147 IYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMEritvedlksiteapp 226
Cdd:cd15986   7 IYTLGHSVSLIALTTGSTILCLFRKLHCTRNYIHLNLFFSFILRAISVLVKDDILYSSSNTEHCT--------------- 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 227 aNKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIfMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTECW 306
Cdd:cd15986  72 -VPPSLIGCKVSLVILQYCIMANFYWLLVEGLYLHTLL-VVIFSENRHFIVYLLIGWGIPTVFIIAWIVARIYLEDTGCW 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 307 DLSAGNL-KWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDtRQQYRKLLKSTLVLMPLFGVHYIVFMAMPYTE 385
Cdd:cd15986 150 DTNDHSVpWWVIRIPIIISIILNFILFISIIRILLQKLRSPDVGGND-QSQYKRLAKSTLLLIPLFGVHYIVFVYFPDSS 228
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 18859287 386 VSgvlwQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAW 428
Cdd:cd15986 229 SS----NYQIFFELCLGSFQGLVVAILYCFLNSEVQGELKRKW 267
7tmB1_NPR_B7_insect-like cd15273
insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of ...
146-430 1.40e-84

insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from invertebrates. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320401 [Multi-domain]  Cd Length: 285  Bit Score: 263.85  E-value: 1.40e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 146 LIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALqemeritvedLKSITEAP 225
Cdd:cd15273   6 GISQIGYIVSLITLIIAFAIFLSFKKLHCARNKLHMHLFASFILRAFMTLLKDSLFIDGLGL----------LADIVERN 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 226 PANKTQFI------GCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRAT 299
Cdd:cd15273  76 GGGNEVIAnigsnwVCKAITSLWQYFIIANYSWILMEGLYLHNLIFLALFSDENNIILYILLGWGLPLIFVVPWIVARIL 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 300 LADTECWDL-SAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRcdtRQQYRKLLKSTLVLMPLFGVHYIVF 378
Cdd:cd15273 156 FENSLCWTTnSNLLNFLIIRIPIMISVLINFILFLNIVRVLLVKLRSSVNED---SRRYKKWAKSTLVLVPLFGVHYTIF 232
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 18859287 379 MAMPYTEVSGVLWQ-IQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15273 233 LILSYLDDTNEAVElIWLFCDQLFASFQGFFVALLYCFLNGEVRAEIQRKWRR 285
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
144-430 1.05e-82

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 258.91  E-value: 1.05e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVL---YSGSALQEMERITVEDLKS 220
Cdd:cd15266   4 LQLIYTIGYSLSLISLSLALLILLLLRKLHCTRNYIHMNLFASFILRALAVLIKDIVLystYSKRPDDETGWISYLSEES 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITeappanktqfiGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15266  84 ST-----------SCRVAQVFMHYFVGANYFWLLVEGLYLHTLLVTAVLSERRLLKKYMLIGWGTPVLFVVPWGVAKILL 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSaGNLK--WIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgrCDTRQQYRkLLKSTLVLMPLFGVHYIVF 378
Cdd:cd15266 153 ENTGCWGRN-ENMGiwWIIRGPILLCITVNFYIFLKILKLLLSKLKAQQM--RFTDYKYR-LARSTLVLIPLLGIHEVVF 228
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 18859287 379 MAMPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15266 229 SFITDEQVEGFSRHIRLFIQLTLSSFQGFLVAVLYCFANGEVKAELKKRWQL 280
7tmB1_PACAP-R1 cd15987
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B ...
147-428 2.82e-75

pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.


Pssm-ID: 320653 [Multi-domain]  Cd Length: 268  Bit Score: 239.10  E-value: 2.82e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 147 IYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEdlksiteapp 226
Cdd:cd15987   7 LYTVGYSTSLVSLTTAMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIKDGVLYAEQDSDHCFVSTVE---------- 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 227 anktqfigCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTECW 306
Cdd:cd15987  77 --------CKAVMVFFHYCVMSNYFWLFIEGLYLFTLLVETFFPERRYFYWYTIIGWGTPTICVTVWAVLRLHFDDTGCW 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 307 DLSAGN-LKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTrQQYRKLLKSTLVLMPLFGVHYIVFMAMPyTE 385
Cdd:cd15987 149 DMNDNTaLWWVIKGPVVGSIMINFVLFIGIIIILVQKLQSPDIGGNES-SIYLRLARSTLLLIPLFGIHYTVFAFSP-EN 226
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 18859287 386 VSGvlwQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAW 428
Cdd:cd15987 227 VSK---RERLVFELGLGSFQGFVVAVLYCFLNGEVQSEIKRKW 266
7tmB1_GlucagonR-like_1 cd15985
uncharacterized group of glucagon receptor-like proteins, member of the class B family of ...
146-428 3.00e-73

uncharacterized group of glucagon receptor-like proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This group consists of uncharacterized proteins with similarity to members of the glucagon receptor family of G protein-coupled receptors, which include glucagon receptor (GCGR), and glucagon-like peptide-1 receptor (GLP1R), and GLP2R. The glucagon receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320651 [Multi-domain]  Cd Length: 280  Bit Score: 234.44  E-value: 3.00e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 146 LIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKSITEAp 225
Cdd:cd15985   6 MLYTVGYTLSLLTLVSALLILTSIRKLHCTRNYIHANLFASFILRAVSVIVKDTLLERRWGREIMRVADWGELLSHKAA- 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 226 panktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTEC 305
Cdd:cd15985  85 -------IGCRMAQVVMQYCILANHYWFFVEAVYLYKLLIGAVFSEKNYYLLYLYLGWGTPVLFVVPWMLAKYLKENKEC 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 306 WDLSAgNLK--WIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQqyrKLLKSTLVLMPLFGVHYIVFMAMPY 383
Cdd:cd15985 158 WALNE-NMAywWIIRIPILLASLINLLIFMRILKVILSKLRANQKGYADYKL---RLAKATLTLIPLFGIHEVVFIFATD 233
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 18859287 384 TEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAW 428
Cdd:cd15985 234 EQTTGILRYIKVFFTLFLNSFQGFLVAVLYCFANKEVKSELLKKW 278
7tmB1_GCGR cd15267
glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled ...
141-430 1.46e-71

glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon receptor (GCGR) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon-like peptide-1 receptor (GLP1R) and GLP2R. GCGR is activated by glucagon, which is derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320395 [Multi-domain]  Cd Length: 281  Bit Score: 230.09  E-value: 1.46e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 141 FDRLYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVL---YSGSALQEMERITVED 217
Cdd:cd15267   3 YSSFQVMYTVGYSLSLGALLLALAILGGFSKLHCMRNAIHMNLFASFILKASSVLVIDGLLrtrYSQKIEDDLSSTWLSD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 218 lksiteappankTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVR 297
Cdd:cd15267  83 ------------EAVAGCRVAAVFMQYGIVANYCWLLVEGIYLHNLLVLAVFPERSYFSLYLCIGWGAPALFVVPWVVVK 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 298 ATLADTECWDLSAG-NLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRqqyRKLLKSTLVLMPLFGVHYI 376
Cdd:cd15267 151 CLYENVQCWTSNDNmGFWWILRFPVFLAILINFFIFVRIIQILVSKLRARQMHYTDYK---FRLAKSTLTLIPLLGIHEV 227
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 18859287 377 VFMAMPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15267 228 VFAFVTDEHAQGTLRSAKLFFDLFLSSFQGLLVAVLYCFLNKEVQSELRRRWHR 281
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
146-430 2.89e-69

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 223.45  E-value: 2.89e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 146 LIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVkdvvlysgsalqeMERITVEDLKSITEAP 225
Cdd:cd15264   6 IIYYLGFSISLVALAVALIIFLYFRSLRCLRNNIHCNLIVTFILRNVTWFI-------------MQNTLTEIHHQSNQWV 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 226 panktqfigCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTEC 305
Cdd:cd15264  73 ---------CRLIVTVYNYFQVTNFFWMFVEGLYLHTMIVWAYSADKIRFWYYIVIGWCIPCPFVLAWAIVKLLYENEHC 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 306 W--DLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgrcDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMPy 383
Cdd:cd15264 144 WlpKSENSYYDYIYQGPILLVLLINFIFLFNIVWVLITKLRASNT---LETIQYRKAVKATLVLLPLLGITYMLFFINP- 219
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 18859287 384 tEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15264 220 -GDDKTSRLVFIYFNTFLQSFQGLFVAVFYCFLNGEVRSAIRKKFSR 265
7tmB1_GLP1R cd15268
glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G ...
144-430 9.22e-69

glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-1 receptor (GLP1R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor and GLP2R. GLP1R is activated by glucagon-like peptide 1 (GLP1), which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341342 [Multi-domain]  Cd Length: 279  Bit Score: 222.52  E-value: 9.22e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVL---YSGSALQEmeriTVEDLKS 220
Cdd:cd15268   4 LYIIYTVGYALSFSALVIASAILLGFRHLHCTRNYIHLNLFASFILRALSVFIKDAALkwmYSTAAQQH----QWDGLLS 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 ITEAppanktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15268  80 YQDS--------LSCRLVFLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQRIFRLYLSIGWGVPLLFVIPWGIVKYLY 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKW-IVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgrCDTRQQYRkLLKSTLVLMPLFGVHYIVFM 379
Cdd:cd15268 152 EDEGCWTRNSNMNYWlIIRLPILFAIGVNFLIFIRVICIVVSKLKANLM--CKTDIKCR-LAKSTLTLIPLLGTHEVIFA 228
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 18859287 380 AMPYTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15268 229 FVMDEHARGTLRFVKLFTELSFTSFQGLMVAILYCFVNNEVQMEFRKSWER 279
7tmB1_calcitonin_R cd15274
calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
144-430 4.95e-63

calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors for calcitonin (CT) and calcitonin gene-related peptides (CGRPs). Calcitonin, a 32-amino acid peptide hormone, is involved in calcium metabolism in many mammalian species and acts to reduce blood calcium levels and directly inhibits bone resorption by acting on osteoclast. Thus, CT acts as an antagonist to parathyroid hormone and is commonly used in the treatment of bone disorders. The CT receptor is predominantly found in osteoclasts, kidney, and brain, and is primarily coupled to stimulatory G(s) protein, which leads to activation of adenylate cyclase, thereby increasing cAMP production. CGRP, a member of the calcitonin family of peptides, is a potent vasodilator and may contribute to migraine. It is expressed in the peripheral and central nervous system and exists in two forms in humans (alpha-CGRP and beta-CGRP). CGRP meditates its physiological effects through calcitonin receptor-like receptor (CRLR) and receptor activity-modifying protein 1 (RAMP1), a single transmembrane domain protein. Thus, the CRLR/RAMP1 complex serves as a functional CGRP receptor. On the other hand, the CRLR/RAMP2 and CRLR/RAMP3 complexes function as adrenomedullin-specific receptors. The CT and CGRP receptors belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide.


Pssm-ID: 341343 [Multi-domain]  Cd Length: 274  Bit Score: 207.32  E-value: 4.95e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAIsifvkdvvlysgsalqemerITVEDLKSITE 223
Cdd:cd15274   4 LYYLAIVGHSLSIATLLISLGIFFFFRSLSCQRVTLHKNLFLSYILNSI--------------------IIIIHLVAVVP 63
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 APPANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADT 303
Cdd:cd15274  64 NGELVARNPVSCKILHFIHQYMMGCNYFWMLCEGIYLHTLIVVAVFAEKQRLMWYYLLGWGFPLIPTTIHAITRAVYYND 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 304 ECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCdtrQQYRKLLKSTLVLMPLFGVHYIVFMAMPY 383
Cdd:cd15274 144 NCWLSSETHLLYIIHGPIMAALVVNFFFLLNIVRVLVTKLRETHEAES---HMYLKAVKATLILVPLLGIQFVLFPWRPS 220
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 18859287 384 TEVSGVLWQIQMHYEMLFnsvQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15274 221 GKILGKIYDYVMHSLIHF---QGFFVATIFCFCNGEVQATLKRQWNQ 264
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
147-430 2.72e-62

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 205.20  E-value: 2.72e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 147 IYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAIS--IFVKDVVLYSGSALQemeritvedlksitea 224
Cdd:cd15260   7 VYIGGYSVSLIALIISLAIFFSFRSLRCTRITIHMNLFISFALNNLLwiVWYKLVVDNPEVLLE---------------- 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 225 ppaNKtqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATL-ADT 303
Cdd:cd15260  71 ---NP---IWCQALHVLLQYFMVCNYFWMFCEGLYLHTVLVVAFISEKSLMRWFIAIGWGVPLVITAIYAGVRASLpDDT 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 304 E-CWdLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRcdTRQQYRKLLKSTLVLMPLFGVHYIVFMAMP 382
Cdd:cd15260 145 ErCW-MEESSYQWILIVPVVLSLLINLIFLINIVRVLLTKLRATSPNP--APAGLRKAVRATLILIPLLGLQFLLIPFRP 221
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 18859287 383 ytEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15260 222 --EPGAPLETIYQYVSALLTSLQGLCVAVLFCFCNGEVIAAIKRKWRR 267
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
144-424 2.46e-59

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 197.05  E-value: 2.46e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSgsalqemeritvedlksite 223
Cdd:cd13952   4 LSIITYIGCSLSLVGLLLTIITYLLFPKLRNLRGKILINLCLSLLLAQLLFLIGQLLTSS-------------------- 63
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appankTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFF-SDRKYLWGFTLIGWGVPAMFVTIWASVRATLAD 302
Cdd:cd13952  64 ------DRPVLCKALAILLHYFLLASFFWMLVEAFDLYRTFVKVFGsSERRRFLKYSLYGWGLPLLIVIITAIVDFSLYG 137
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 303 TE-------CWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNagRCDTRQQYRKLLKSTLVLMPLFGVHY 375
Cdd:cd13952 138 PSpgyggeyCWLSNGNALLWAFYGPVLLILLVNLVFFILTVRILLRKLRETP--KQSERKSDRKQLRAYLKLFPLMGLTW 215
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 18859287 376 IVFMAMPYTEVSGVLWQIqmhyEMLFNSVQGFFVAIIYCFCNGEVQAEI 424
Cdd:cd13952 216 IFGILAPFVGGSLVFWYL----FDILNSLQGFFIFLIFCLKNKEVRRLL 260
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
146-430 5.55e-55

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 186.04  E-value: 5.55e-55
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 146 LIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQemeritvedlksiteap 225
Cdd:cd15263   6 TIYFIGYSLSLVALSLALWIFLYFKDLRCLRNTIHTNLMFTYILADLTWILTLTLQVSIGEDQ----------------- 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 226 panktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRA---TLAD 302
Cdd:cd15263  69 -------KSCIILVVLLHYFHLTNFFWMFVEGLYLYMLVVETFSGENIKLRVYAFIGWGIPAVVIVIWAIVKAlapTAPN 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 303 TE---------CWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCdtrQQYRKLLKSTLVLMPLFGV 373
Cdd:cd15263 142 TAldpngllkhCPWMAEHIVDWIFQGPAILVLAVNLVFLVRIMWVLITKLRSANTVET---QQYRKAAKALLVLIPLLGI 218
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 18859287 374 HYIVFMAMPYTEVSGVLWQiqmHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15263 219 TYILVIAGPTEGIAANIFE---YVRAVLLSTQGFTVALFYCFLNTEVRNTLRHHFER 272
7tmB1_PDFR cd15261
The pigment dispersing factor receptor, member of the class B seven-transmembrane G ...
150-430 6.64e-51

The pigment dispersing factor receptor, member of the class B seven-transmembrane G protein-coupled receptors; The pigment dispersing factor receptor (PDFR) is a G protein-coupled receptor that binds the circadian clock neuropeptide PDF, a functional ortholog of the mammalian vasoactive intestinal peptide (VIP), on the pacemaker neurons. The PDFR is implicated in regulating flight circuit development and in modulating acute flight In Drosophila melanogaster. The PDFR activation stimulates adenylate cyclase, thereby increasing cAMP levels in many different pacemakers, and the receptor signaling has been shown to regulate behavioral circadian rhythms and geotaxis in Drosophila. The PDFR belongs to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. . These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. They play key roles in hormone homeostasis in mammals and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression).


Pssm-ID: 320389 [Multi-domain]  Cd Length: 282  Bit Score: 175.63  E-value: 6.64e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 150 VGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISifvkDVVLYSGSAlqemerITVEDLKSITEAPPANK 229
Cdd:cd15261  10 VGLCLSLVSLIISLFIFSYFRTLRNHRTRIHKNLFLAILLQVII----RLVLYIDQA------ITRSRGSHTNAATTEGR 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 230 TQF---IGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTE-C 305
Cdd:cd15261  80 TINstpILCEGFYVLLEYAKTVMFMWMFIEGLYLHNIIVVSVFSGKPNYLFYYILGWGIPIVHTSAWAIVTLIKMKVNrC 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 306 WdlSAGNLK---WIVQIPILTAIVVNFLLFLNIIRVLATKLRETNagrCDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMP 382
Cdd:cd15261 160 W--FGYYLTpyyWILEGPRLAVILINLFFLLNIIRVLVSKLRESH---SREIEQVRKAVKAAIVLLPLLGITNILQMIPP 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 18859287 383 YTEVSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15261 235 PLTSVIVGFAVWSYSTHFLTSFQGFFVALIYCFLNGEVKNVLKKFWRR 282
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
146-430 2.73e-49

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 170.89  E-value: 2.73e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 146 LIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKdvvlysgsalqemeritvedlkSITEAP 225
Cdd:cd15445   6 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLITAFILRNATWFVV----------------------QLTMSP 63
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 226 PANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTEC 305
Cdd:cd15445  64 EVHQSNVVWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDKLRKWMFICIGWCIPFPIIVAWAIGKLYYDNEKC 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 306 WDLSAGNL--KWIVQIPILTAIVVNFLLFLNIIRVLATKLRetnAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMP- 382
Cdd:cd15445 144 WFGKRAGVytDYIYQGPMILVLLINFIFLFNIVRILMTKLR---ASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPg 220
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 18859287 383 YTEVSGVLWqiqMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15445 221 EDEISRIVF---IYFNSFLESFQGFFVSVFYCFLNSEVRSAVRKRWHR 265
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
146-430 2.05e-46

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 163.21  E-value: 2.05e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 146 LIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSgsalqemeritvedlksiteap 225
Cdd:cd15446   6 IINYLGHCISVGALVVAFLLFLCLRSIRCLRNIIHWNLITTFILRNVMWFLLQMIDHN---------------------- 63
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 226 pANKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTEC 305
Cdd:cd15446  64 -IHESNEVWCRCITTIYNYFVVTNFFWMFVEGCYLHTAIVMTYSTDKLRKWVFLFIGWCIPCPIIVAWAIGKLYYENEQC 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 306 W--DLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRetnAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMP- 382
Cdd:cd15446 143 WfgKEPGKYIDYIYQGPVILVLLINFVFLFNIVRILMTKLR---ASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPg 219
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 18859287 383 YTEVSGVLWqiqMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15446 220 EDDISQIVF---IYFNSFLQSFQGFFVSVFYCFLNGEVRSAARKRWHR 264
7tmB1_NPR_B3_insect-like cd15262
insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of ...
145-430 3.27e-44

insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of hormone receptors; member of the class B secretin-like seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Bombyx mori (silk worm) and its closely related proteins from arthropods. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320390 [Multi-domain]  Cd Length: 270  Bit Score: 157.61  E-value: 3.27e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 145 YLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSgSALQEMERITVEDLKSItea 224
Cdd:cd15262   5 YRFHVAALSVSVVTSLPAVFIFYSYKRLRITRVILHRNLLISIIIRNILVIISKVFVIL-DALTSSGDDTVMNQNAV--- 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 225 ppanktqfiGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFF--SDRKYLWGftlIGWGVPAMFVTIWASVRATLAD 302
Cdd:cd15262  81 ---------VCRLLSIFERAARNAVFACMFVEGFYLHRLIVAVFAekSSIRFLYV---IGAVLPLFPVIIWAIIRALHND 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 303 TECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNagrcdTRQQYRKLLKSTLVLMPLFGVHYIVFMAMP 382
Cdd:cd15262 149 HSCWVVDIEGVQWVLDTPRLFILLVNTVLLVDIIRVLVTKLRNTE-----ENSQTKSTTRATLFLVPLFGLHFVITAYRP 223
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 18859287 383 YTEvSGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15262 224 STD-DCDWEDIYYYANYLIEGLQGFLVAILFCYINKEVHYLIKNTYRK 270
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
150-428 5.42e-26

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 106.89  E-value: 5.42e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 150 VGYSISLGSLMVATVILGYFRRLHC-TRNYIHMHLflsfmlrAISIFVKDVVLYSGsalqemerITVEDLKsiteappan 228
Cdd:cd15040  10 IGCGLSLLGLLLTIITYILFRKLRKrKPTKILLNL-------CLALLLANLLFLFG--------INSTDNP--------- 65
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 229 ktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTF-FSDRKYLWGFTLIGWGVPAMFVTIWASVRATL---ADTE 304
Cdd:cd15040  66 ----VLCTAVAALLHYFLLASFMWMLVEALLLYLRLVKVFgTYPRHFILKYALIGWGLPLIIVIITLAVDPDSygnSSGY 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 305 CWdLSAGN-LKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgrcDTRQQYRKLLKSTLVLMPLFGVHYIvFMAMPY 383
Cdd:cd15040 142 CW-LSNGNgLYYAFLGPVLLIILVNLVIFVLVLRKLLRLSAKRNK---KKRKKTKAQLRAAVSLFFLLGLTWI-FGILAI 216
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 18859287 384 TEVSGVLWQIQMhyemLFNSVQGFFVAIIYCFCNGEVQaeikKAW 428
Cdd:cd15040 217 FGARVVFQYLFA----IFNSLQGFFIFIFHCLRNKEVR----KAW 253
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
144-422 2.92e-24

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 101.64  E-value: 2.92e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFvkdvvlysgsalqemeritvedlksITE 223
Cdd:cd15933   4 LSIISYIGCGISIACLALTLIIFLVLRVLSSDRFQIHKNLCVALLLAQILLL-------------------------AGE 58
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 APPANKTqfiGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFF--SDRKYlwgFTLIGWGVPAMFVTIWASVRATLA 301
Cdd:cd15933  59 WAEGNKV---ACKVVAILLHFFFMAAFSWMLVEGLHLYLMIVKVFNykSKMRY---YYFIGWGLPAIIVAISLAILFDDY 132
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 302 DTE--CWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIvFM 379
Cdd:cd15933 133 GSPnvCWLSLDDGLIWAFVGPVIFIITVNTVILILVVKITVSLSTNDAKKSQGTLAQIKSTAKASVVLLPILGLTWL-FG 211
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 18859287 380 AMPYTEVSgvlwqIQMHYemLF---NSVQGFFVAIIYCFCNGEVQA 422
Cdd:cd15933 212 VLVVNSQT-----IVFQY--IFvilNSLQGLMIFLFHCVLNSEVRS 250
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
60-125 3.21e-24

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 95.51  E-value: 3.21e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18859287    60 EGSCLPEWDGILCWPEGVPGKMVSTSCPEYIYDFNHKGHAYRRCDLNGTWELASHnnktwANYSEC 125
Cdd:pfam02793   1 GLGCPRTWDGILCWPRTPAGETVEVPCPDYFSGFDPRGNASRNCTEDGTWSEHPP-----SNYSNC 61
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
144-426 4.21e-22

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 95.79  E-value: 4.21e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSfmlraisIFVKDVVLYSGSALQEmeritvedlksite 223
Cdd:cd15440   4 LTFITYIGCIISIVCLLLAFITFTCFRNLQCDRNTIHKNLCLC-------LLIAEIVFLLGIDQTE-------------- 62
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appaNKTQfigCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADT 303
Cdd:cd15440  63 ----NRTL---CGVIAGLLHYFFLAAFSWMLLEGFQLYVMLVEVFEPEKSRIKWYYLFGYGLPALIVAVSAGVDPTGYGT 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 304 E--CWDLSAGNLKWIVQIPILTAIVVNFL-LFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVfma 380
Cdd:cd15440 136 EdhCWLSTENGFIWSFVGPVIVVLLANLVfLGMAIYVMCRHSSRSASKKDASKLKNIRGWLKGSIVLVVLLGLTWTF--- 212
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 18859287 381 mpytevsGVLWQIQ----MHYemLF---NSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15440 213 -------GLLFINQesivMAY--IFtilNSLQGLFIFIFHCVLNEKVRKELRR 256
HormR smart00008
Domain present in hormone receptors;
59-125 3.20e-21

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 87.57  E-value: 3.20e-21
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18859287     59 SEGSCLPEWDGILCWPEGVPGKMVSTSCPEYIYDFNHKGHAYRRCDLNGTWELashnnkTWANYSEC 125
Cdd:smart00008   1 TDLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGFSYKTGASRNCTENGGWSP------PFPNYSNC 61
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
144-426 6.42e-19

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 86.63  E-value: 6.42e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGsalqemeritvedlksite 223
Cdd:cd15439   4 LTVITYVGLIISLLCLFLAILTFLLCRSIRNTSTSLHLQL-------SLCLFLADLLFLVG------------------- 57
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appANKTQF-IGCKV-AVTLFLYFLATnYYWILVEGLYLH----SLIFMTFFSDRKYL-WGFTLIGWGVPAMFVTIWASV 296
Cdd:cd15439  58 ---IDRTDNkVLCSIiAGFLHYLFLAC-FAWMFLEAVHLFltvrNLKVVNYFSSHRFKkRFMYPVGYGLPAVIVAISAAV 133
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 297 RATLADTE--CWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgRCDTRQQYRKLLKSTLVLMPLFGVH 374
Cdd:cd15439 134 NPQGYGTPkhCWLSMEKGFIWSFLGPVCVIIVINLVLFCLTLWILREKLSSLNA-EVSTLKNTRLLTFKAIAQLFILGCT 212
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 18859287 375 YIV--FMAMPYTEVSGVLWQIqmhyemlFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15439 213 WILglFQVGPVATVMAYLFTI-------TNSLQGVFIFLVHCLLNRQVREEYRR 259
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
147-425 7.36e-17

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 80.35  E-value: 7.36e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 147 IYTVGYSISLGSLMVATVILGYFRRLHCTRNY-IHMHLFLSFmlraiSIFVKDVVLysgsalqemeritvedLKSITEAP 225
Cdd:cd15256   7 ITYVGCSLSIFCLAITLVTFAVLSSVSTIRNQrYHIHANLSF-----AVLVAQILL----------------LISFRFEP 65
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 226 PAnktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMF--VTIWASVRATLADT 303
Cdd:cd15256  66 GT-----LPCKIMAILLHFFFLSAFAWMLVEGLHLYSMVIKVFGSEESKHFYYYGIGWGSPLLIciISLTSALDSYGESD 140
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 304 ECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTrQQYRKLLKSTLVLMPLFGVHYIvFMAMPY 383
Cdd:cd15256 141 NCWLSLENGAIWAFVAPALFVIVVNIGILIAVTRVISRISADNYKVHGDA-NAFKLTAKAVAVLLPILGSSWV-FGVLAV 218
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 18859287 384 TEVSGVLwqiqMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIK 425
Cdd:cd15256 219 NTHALVF----QYMFAIFNSLQGFFIFLFHCLLNSEVRAAFK 256
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
150-430 3.71e-16

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 78.45  E-value: 3.71e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 150 VGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGsalqeMERitvedlksiteappaNK 229
Cdd:cd15441  10 IGIGISLVLLVIAFLVLSCLRGLQSNSNSIHKNL-------VACLLLAELLFLLG-----INQ---------------TE 62
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 230 TQFIgCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADTE--CWD 307
Cdd:cd15441  63 NLFP-CKLIAILLHYFYLSAFSWLLVESLHLYRMLTEPRDINHGHMRFYYLLGYGIPAIIVGLSVGLRPDGYGNPdfCWL 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 308 LSAGNLKWIVQIPILTAIVVNFLLFlniIRVLATKLRETNAGRcdTRQQYRKLLKSTLVLMPLFGVhyivfmampyTEVS 387
Cdd:cd15441 142 SVNETLIWSFAGPIAFVIVITLIIF---ILALRASCTLKRHVL--EKASVRTDLRSSFLLLPLLGA----------TWVF 206
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 18859287 388 GVLwQIQMHYEML------FNSVQGFFVAIIYCFCNGEVQAEIKKAWNR 430
Cdd:cd15441 207 GLL-AVNEDSELLhylfagLNFLQGLFIFLFYCIFNKKVRRELKNALLR 254
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
144-426 2.57e-15

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 75.95  E-value: 2.57e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGSAlqemeritvedlksite 223
Cdd:cd15438   4 LTLITKVGLSVSLFCLFLCILTFLFCRSIRGTRNTIHLHL-------CLSLFLAHLIFLLGIN----------------- 59
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appaNKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASVRATLADT 303
Cdd:cd15438  60 ----NTNNQVACAVVAGLLHYFFLAAFCWMSLEGVELYLMVVQVFNTQSLKKRYLLLIGYGVPLVIVAISAAVNSKGYGT 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 304 E--CWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgRCDTRQQYRKLLKSTLVLMPLFGVHYI--VFM 379
Cdd:cd15438 136 QrhCWLSLERGFLWSFLGPVCLIILVNAIIFVITVWKLAEKFSSINP-DMEKLRKIRALTITAIAQLCILGCTWIfgFFQ 214
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 18859287 380 AMPYTEVSGVLWQIqmhyemlFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15438 215 FSDSTLVMSYLFTI-------LNSLQGLFIFLLHCLLSKQVREEYSR 254
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
144-426 9.65e-13

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 68.30  E-value: 9.65e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGSAlqemeritvedlksite 223
Cdd:cd15252   4 LTRITQVGIIISLVCLAICIFTFWFFRGLQSDRTTIHKNL-------CISLFLAELVFLIGIN----------------- 59
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appaNKTQFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASV--RATLA 301
Cdd:cd15252  60 ----TTTNKIFCSVIAGLLHYFFLAAFAWMFIEGIQLYLMLVEVFENEGSRHKNFYIFGYGSPAVIVGVSAALgyRYYGT 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 302 DTECWDLSAGNLKWIVQIPILTAIVVNfLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIvFMAM 381
Cdd:cd15252 136 TKVCWLSTENYFIWSFIGPATLIILLN-LIFLGVAIYKMFRHTAGLKPEVSCLENIRSWARGAIALLFLLGLTWI-FGVL 213
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 18859287 382 PYTEVSGVLwqiqMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15252 214 HINHASVVM----AYLFTVSNSLQGMFIFLFHCVLSRKVRKEYYK 254
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
144-426 3.78e-12

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 66.48  E-value: 3.78e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGsalqemeritvedlksite 223
Cdd:cd16007   4 LSVITWVGIVISLVCLAICISTFCFLRGLQTDRNTIHKNL-------CINLFLAELLFLIG------------------- 57
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appANKTQF-IGCKVAVTLFLYFLATNYYWILVEGLYLHSL---IFMTFFSDRKYlwgFTLIGWGVPAMFVTIWASV--R 297
Cdd:cd16007  58 ---IDKTQYqIACPIFAGLLHFFFLAAFSWLCLEGVQLYLMlveVFESEYSRKKY---YYLCGYCFPALVVGISAAIdyR 131
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 298 ATLADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIR--VLATKLRETNAGRCDTRQQYRKLLKSTLVLMPL---FG 372
Cdd:cd16007 132 SYGTEKACWLRVDNYFIWSFIGPVSFVIVVNLVFLMVTLHkmIRSSSVLKPDSSRLDNIKSWALGAITLLFLLGLtwaFG 211
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 18859287 373 VHYI----VFMAMPYTevsgvlwqiqmhyemLFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd16007 212 LLFInkesVVMAYLFT---------------TFNAFQGMFIFIFHCALQKKVHKEYSK 254
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
144-426 3.95e-12

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 66.38  E-value: 3.95e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGSALQEMEritvedlksite 223
Cdd:cd15931   4 LEWINRVGVIVSLFCLGLAIFTFLLCRWIPKINTTAHLHL-------CLCLSMSHTLFLAGIEYVENE------------ 64
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appanktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTF----FSDR--KYLWgFTLIGWGVPAMFVTIWASV- 296
Cdd:cd15931  65 ---------LACTVMAGLLHYLFLASFVWMLLEALQLHLLVRRLTkvqvIQRDglPRPL-LCLIGYGVPFLIVGVSALVy 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 297 -RATLADTECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgRCDTRQQYRKLLKSTLVLMPLFGVHY 375
Cdd:cd15931 135 sDGYGEAKMCWLSQERGFNWSFLGPVIAIIGINWILFCATLWCLRQTLSNMNS-DISQLKDTRLLTFKAVAQLFILGCTW 213
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 18859287 376 I--VFMAMPYTEVSGVLWQIqmhyemlFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15931 214 VlgLFQTNPVALVFQYLFTI-------LNSLQGAFLFLVHCLLNKEVREEYIK 259
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
144-423 7.23e-12

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 65.90  E-value: 7.23e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLhcTRNY---IHMHLFLSFMLRAISIFVKdvvlySGSALQEMERitvedlks 220
Cdd:cd15258   4 LTFISYVGCGISAIFLAITILTYIAFRKL--RRDYpskIHMNLCAALLLLNLAFLLS-----SWIASFGSDG-------- 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 221 iteappanktqfiGCKVAVTLFLYFLATNYYWILVEGLYLHSL---IFMTFFsdRKYLWGFTLIGWGVPAMFVTIWASVR 297
Cdd:cd15258  69 -------------LCIAVAVALHYFLLACLTWMGLEAFHLYLLlvkVFNTYI--RRYILKLCLVGWGLPALLVTLVLSVR 133
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 298 ATLADTeCWDLSAGNLK-----WIVQIPILTAIVVNF--LLFLNIIRVLATKL----RETNAGRCDTRQQYRKLLKSTLV 366
Cdd:cd15258 134 SDNYGP-ITIPNGEGFQndsfcWIRDPVVFYITVVGYfgLTFLFNMVMLATVLvqicRLREKAQATPRKRALHDLLTLLG 212
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 18859287 367 LMPLFGVHY-IVFMAMpytevsGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAE 423
Cdd:cd15258 213 LTFLLGLTWgLAFFAW------GPFNLPFLYLFAIFNSLQGFFIFIWYCSMKENVRKQ 264
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
237-426 2.36e-11

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 64.10  E-value: 2.36e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 237 VAVTLFLYFLATnYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMF--VTIWASVRATLADTECWDLSAGNLK 314
Cdd:cd15255  70 VTALLHLFFLAA-FSWMLVEGLLLWSKVVAVNMSEDRRMKFYYVTGWGLPVVIvaVTLATSFNKYVADQHCWLNVQTDII 148
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 315 WIVQIPILTAIVVNFLLFLNIIRVLATKLRETN---AGRCDTRQQYRKLL----KSTLVLMPLFGVhyivfmampyTEVS 387
Cdd:cd15255 149 WAFVGPVLFVLTVNTFVLFRVVMVTVSSARRRAkmlTPSSDLEKQIGIQIwataKPVLVLLPVLGL----------TWLC 218
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 18859287 388 GVLWQIQMHYEMLF---NSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15255 219 GVLVHLSDVWAYVFitlNSFQGLYIFLVYAIYNSEVRNAIQR 260
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
144-426 1.05e-10

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 62.12  E-value: 1.05e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFlsfmlraISIFVKDVVLYSGsalqemeritvedlksite 223
Cdd:cd15436   4 LFVITWVGIVISLVCLLICIFTFCFFRGLQTDRNTIHKNLC-------INLFIAELLFLIG------------------- 57
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appANKTQF-IGCKVAVTLFLYFLATNYYWILVEGLYLHSL---IFMTFFSDRKYlwgFTLIGWGVPAMFVTIWASV--R 297
Cdd:cd15436  58 ---INRTQYtIACPIFAGLLHFFFLAAFCWLCLEGVQLYLLlveVFESEYSRRKY---FYLCGYSFPALVVAVSAAIdyR 131
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 298 ATLADTECWDLSAGNLKWIVQIPILTAIVVNfLLFLNII---RVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPL---F 371
Cdd:cd15436 132 SYGTEKACWLRVDNYFIWSFIGPVTFVITLN-LVFLVITlhkMVSHSDLLKPDSSRLDNIKSWALGAIALLFLLGLtwsF 210
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 18859287 372 GVHYI----VFMAMPYTevsgvlwqiqmhyemLFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15436 211 GLMFIneesVVMAYLFT---------------IFNAFQGVFIFIFHCALQKKVRKEYSK 254
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
237-426 2.43e-10

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 61.31  E-value: 2.43e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 237 VAVTLFLYF--LATnYYWILVEGLYL-HSLIFMTF-FSDRKYLWGFTLIGWGVPAMF----VTIWASVRATLADTECWDL 308
Cdd:cd15253  76 LAAAFLCHFfyLAT-FFWMLVQALMLfHQLLFVFHqLAKRSVLPLMVTLGYLCPLLIaaatVAYYYPKRQYLHEGACWLN 154
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 309 SAGNLKWIVQIPILTAIVVNFL-LFLNIIRVLATKLRETNagRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMPYTEVS 387
Cdd:cd15253 155 GESGAIYAFSIPVLAIVLVNLLvLFVVLMKLMRPSVSEGP--PPEERKALLSIFKALLVLTPVFGLTWGLGVATLTGESS 232
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 18859287 388 GVlwqiqMHYEM-LFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15253 233 QV-----SHYGFaILNAFQGVFILLFGCLMDKKVREALLK 267
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
144-425 4.39e-10

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 60.40  E-value: 4.39e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRlHCTRNYI-HM-HLFLSFMlrAISIFVKDVVLYSGSALQemeritvedlksi 221
Cdd:cd15932   4 LDYITYVGLGISILSLVLCLIIEALVWK-SVTKNKTsYMrHVCLVNI--ALSLLIADIWFIIGAAIS------------- 67
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 222 teappaNKTQFIGCKVAVTLFLYF--LATnYYWILVEGLYLHSLIFMTFFSDRKYLW---GFTLiGWGVPAMF--VTIWA 294
Cdd:cd15932  68 ------TPPNPSPACTAATFFIHFfyLAL-FFWMLTLGLLLFYRLVLVFHDMSKSTMmaiAFSL-GYGCPLIIaiITVAA 139
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 295 SV--RATLADTECW---DLSAGNLKWIvqIPILTAIVVNFLlflnIIRVLATKLRETNAGRCDTRQQYRKLL---KSTLV 366
Cdd:cd15932 140 TApqGGYTRKGVCWlnwDKTKALLAFV--IPALAIVVVNFI----ILIVVIFKLLRPSVGERPSKDEKNALVqigKSVAI 213
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 367 LMPLFGVHYIVFMAMPYTEVSGVLwqiqmHYEM-LFNSVQGFFVAIIYCFCNGEVQAEIK 425
Cdd:cd15932 214 LTPLLGLTWGFGLGTMIDPKSLAF-----HIIFaILNSFQGFFILVFGTLLDSKVREALL 268
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
144-417 5.74e-10

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 60.13  E-value: 5.74e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMEritvedlksite 223
Cdd:cd14964   1 TTIILSLLTCLGLLGNLLVLLSLVRLRKRPRSTRLLLASLAACDLLASLVVLVLFFLLGLTEASSRPQ------------ 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appanktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLI-----FMTFFSDRKYLWgFTLIGWGVPAMFVTIW----- 293
Cdd:cd14964  69 ---------ALCYLIYLLWYGANLASIWTTLVLTYHRYFALcgplkYTRLSSPGKTRV-IILGCWGVSLLLSIPPlvgkg 138
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 294 ASVRATLADTEC--WDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLF 371
Cdd:cd14964 139 AIPRYNTLTGSCylICTTIYLTWGFLLVSFLLPLVAFLVIFSRIVLRLRRRVRAIRSAASLNTDKNLKATKSLLILVITF 218
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 18859287 372 gvhYIVFMAMPYTEVSGVLWQIQMH------YEMLFNSVQGFFVAIIYCFCN 417
Cdd:cd14964 219 ---LLCWLPFSIVFILHALVAAGQGlnllsiLANLLAVLASTLNPFIYCLGN 267
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
144-426 9.03e-10

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 59.57  E-value: 9.03e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGsalqemeritvedlksite 223
Cdd:cd16005   4 LDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNL-------CISLFVAELLFLIG------------------- 57
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appANKT-QFIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIWASV--RATL 300
Cdd:cd16005  58 ---INRTdQPIACAVFAALLHFFFLAAFTWMFLEGVQLYIMLVEVFESEHSRRKYFYLVGYGMPALIVAVSAAVdyRSYG 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAGNLKWIVQIPILTAIVVNfLLFLNIirVLATKLRETNAGRCDT--RQQYRKLLKSTLVLMPLFGVHYIvf 378
Cdd:cd16005 135 TDKVCWLRLDTYFIWSFIGPATLIIMLN-VIFLGI--ALYKMFHHTAILKPESgcLDNIKSWVIGAIALLCLLGLTWA-- 209
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 18859287 379 MAMPYTEVSGVlwqIQMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd16005 210 FGLMYINESTV---IMAYLFTIFNSLQGMFIFIFHCVLQKKVRKEYGK 254
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
144-428 2.25e-09

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 58.39  E-value: 2.25e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGsalqemeritvedlksite 223
Cdd:cd16006   4 LTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNL-------CINLFIAEFIFLIG------------------- 57
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appANKTQF-IGCKVAVTLFLYFLATNYYWILVEGLYLHSL---IFMTFFSDRKYlwgFTLIGWGVPAMFVTIWASV--R 297
Cdd:cd16006  58 ---IDKTEYkIACPIFAGLLHFFFLAAFAWMCLEGVQLYLMlveVFESEYSRKKY---YYVAGYLFPATVVGVSAAIdyK 131
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 298 ATLADTECWDLSAGNLKWIVQIPILTAIVVNFLLflnIIRVLATKLRETNAGRCDTRQ--QYRKLLKSTLVLMPLFGVHY 375
Cdd:cd16006 132 SYGTEKACWLRVDNYFIWSFIGPVTFIILLNLIF---LVITLCKMVKHSNTLKPDSSRleNIKSWVLGAFALLCLLGLTW 208
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 18859287 376 iVFMAMPYTEVSGVLwqiqMHYEMLFNSVQGFFVAIIYCFCNGEVQAEIKKAW 428
Cdd:cd16006 209 -SFGLLFINEETIVM----AYLFTIFNAFQGMFIFIFHCALQKKVRKEYSKCF 256
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
144-425 4.16e-08

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 54.47  E-value: 4.16e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGSALQEmeritvedlksite 223
Cdd:cd15991   4 LKIITYTTVSLSLVALLITFILLVLIRTLRSNLHSIHKNL-------VAALFFSELIFLIGINQTE-------------- 62
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 224 appankTQFIgCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIwasvrATLADT 303
Cdd:cd15991  63 ------NPFV-CTVVAILLHYFYMSTFAWMFVEGLHIYRMLTEVRNINTGHMRFYYVVGWGIPAIITGL-----AVGLDP 130
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 304 E-------CWDLSAGNLKWIVQIPILTAIVVNFLLFlniirVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYI 376
Cdd:cd15991 131 QgygnpdfCWLSVQDTLIWSFAGPIGIVVIINTVIF-----VLAAKASCGRRQRYFEKSGVISMLRTAFLLLLLISATWL 205
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 18859287 377 VFMAMPYTEVsgvlwqIQMHYEM-LFNSVQGFFVAIIYCFCNGEVQAEIK 425
Cdd:cd15991 206 LGLMAVNSDT------LSFHYLFaIFSCLQGIFIFFFHCIFNKEVRKHLK 249
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
234-430 9.72e-08

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 53.29  E-value: 9.72e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 234 GCKVAVTLFL-YFLATNYYWILVEGLYLHSLIFMTFFSD-RKYLWGFTLIGWGVPAMFVTIWASVRATL----------- 300
Cdd:cd15444  69 GLCISVAVFLhYFLLVSFTWMGLEAFHMYLALVKVFNTYiRKYILKFCIVGWGVPAVVVAIVLAVSKDNyglgsygkspn 148
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 --ADTECWDlsagNLKWIVQIPILTAIVVNFLLFLNIIRVLATKL------RETNAGRCDTRQQYRKLLKSTLVLMPLFG 372
Cdd:cd15444 149 gsTDDFCWI----NNNIVFYITVVGYFCVIFLLNISMFIVVLVQLcrikkqKQLGAQRKTSLQDLRSVAGITFLLGITWG 224
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 18859287 373 VHYIVFmampytevsGVLWQIQMHYEMLFNSVQGFFVAIIYCFcngeVQAEIKKAWNR 430
Cdd:cd15444 225 FAFFAW---------GPVNLAFMYLFAIFNTLQGFFIFIFYCV----AKENVRKQWRR 269
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
231-427 2.43e-07

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 52.15  E-value: 2.43e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 231 QFIgCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIwasvrATLADTE------ 304
Cdd:cd15993  64 QFL-CTVVAILLHYFFLSTFAWLFVQGLHIYRMQTEARNVNFGAMRFYYAIGWGVPAIITGL-----AVGLDPEgygnpd 137
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 305 -CWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLatklretnagrCDTRQqyrKLLKSTLVLMPLFGvHYIVFMAMPY 383
Cdd:cd15993 138 fCWISIHDKLVWSFAGPIVVVIVMNGVMFLLVARMS-----------CSPGQ---KETKKTSVLMTLRS-SFLLLLLISA 202
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 18859287 384 TEVSGVLW----QIQMHY-EMLFNSVQGFFVAIIYCFCNGEVQAEIKKA 427
Cdd:cd15993 203 TWLFGLLAvnnsVLAFHYlHAILCCLQGLAVLLLFCVLNEEVQEAWKLA 251
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
237-421 3.09e-07

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 51.97  E-value: 3.09e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 237 VAVTLFlYFLATNYYWILVEGLYLHsLIFMTFFSD--RKYLWGFTLIGWGVPAMFVTIWASVRATLADTECWDLSAG--- 311
Cdd:cd15997  73 VAAFLH-YFLLASFTWMGLEAVHMY-FALVKVFNIyiPNYILKFCIAGWGIPAVVVALVLAINKDFYGNELSSDSLHpst 150
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 312 NLKWIVQIPILTAIVVNF--LLFLNIIRVLATKLRETNAGRCDTRQQYRKL-----LKSTLVLMPLFGVHYI-VFMAMpy 383
Cdd:cd15997 151 PFCWIQDDVVFYISVVAYfcLIFLCNISMFITVLIQIRSMKAKKPSRNWKQgflhdLKSVASLTFLLGLTWGfAFFAW-- 228
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 18859287 384 tevsGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQ 421
Cdd:cd15997 229 ----GPVRIFFLYLFSICNTLQGFFIFVFHCLMKENVR 262
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
235-425 3.54e-07

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 51.49  E-value: 3.54e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 235 CKVAVTLFLYFLATNYYWILVEGlYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTI---WASVRATLADTECWDLSAG 311
Cdd:cd15251  68 CTMTAAFLHFFFLSSFCWVLTEA-WQSYMAVTGRMRTRLIRKRFLCLGWGLPALVVAVsvgFTRTKGYGTSSYCWLSLEG 146
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 312 NLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRET-NAGRCdtrqqyrklLKSTLVLMPLFGVHYI-VFMAMpyTEVSGV 389
Cdd:cd15251 147 GLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGISdNAMAS---------LWSSCVVLPLLALTWMsAVLAM--TDRRSV 215
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 18859287 390 LWQIQMhyeMLFNSVQGFFVAIIYCFCNGEVQAEIK 425
Cdd:cd15251 216 LFQILF---AVFDSLQGFVIVMVHCILRREVQDAVK 248
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
147-423 8.28e-07

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 50.64  E-value: 8.28e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 147 IYTVGYSISLGSLMVATVILGYFRRLHCTRNYIHMHLflsfmlrAISIFVKDVVLYSGSALQemeritvedlksiteapp 226
Cdd:cd15437   7 ITQLGIIISLICLSMCIFTFWFFSEIQSTRTTIHKNL-------CCSLFLAELIFLIGINMN------------------ 61
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 227 ANKtqfIGCKVAVTLFLYFLATNYYWILVEGLYLHsLIFMTFFSDRKYLW-GFTLIGWGVPAMFVTIWASV--RATLADT 303
Cdd:cd15437  62 ANK---LFCSIIAGLLHYFFLAAFAWMCIEGIHLY-LIVVGVIYNKGFLHkNFYIFGYGSPAVVVGISAALgyKYYGTTK 137
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 304 ECWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLatkLRETNAGRCDTR--QQYRKLLKSTLVLMPLFGVHYI--VFM 379
Cdd:cd15437 138 VCWLSTENNFIWSFIGPACLIILVNLLAFGVIIYKV---FRHTAMLKPEVScyENIRSCARGALALLFLLGATWIfgVLH 214
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 18859287 380 AMPYTEVSGVLWQIqmhyemlFNSVQGFFVAIIYCFCNGEVQAE 423
Cdd:cd15437 215 VVYGSVVTAYLFTI-------SNAFQGMFIFIFLCVLSRKIQEE 251
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
144-426 4.63e-06

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 48.72  E-value: 4.63e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMVATVILGYFRRLHCTRN-------YIHMHLFLSFMLRAISIFVKDVVLYSGSalqemERITVE 216
Cdd:cd15257   4 LDIISTIGCVLSIAGLVITIIFHLHTRKLRKSSVtwvllnlCSSLLLFNIIFTSGVENTNNDYEISTVP-----DRETNT 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 217 DLKSITEAPPANKTqfigCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGF-TLIGWGVPAMFV--TIW 293
Cdd:cd15257  79 VLLSEEYVEPDTDV----CTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKPLPEMFILQaSAIGWGIPAVVVaiTLG 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 294 ASVRATLADTE----------CWdLSA--------GNLKWIVQIPILTAIVVNFLLFlniIRVLATKLRETNAGRCDTRQ 355
Cdd:cd15257 155 ATYRFPTSLPVftrtyrqeefCW-LAAldknfdikKPLLWGFLLPVGLILITNVILF---IMTSQKVLKKNNKKLTTKKR 230
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18859287 356 QYRKLLKSTLVLMPLFGVHYIV--FMAMPYTEVSGVLWQIQmhyeMLFNSVQGFFVAIIYCFCNGEVQAEIKK 426
Cdd:cd15257 231 SYMKKIYITVSVAVVFGITWILgyLMLVNNDLSKLVFSYIF----CITNTTQGVQIFILYTWRTPEFRKLVSK 299
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
235-425 7.39e-06

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 48.03  E-value: 7.39e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 235 CKVAVTLFLYFLATNYYWILVEGL--YLHSLIFMTFFSDRKYlwgFTLIGWGVPAMFVTI---WASVRATLADTECWDLS 309
Cdd:cd15988  68 CTMTAAFLHFFFLSSFCWVLTEAWqsYLAVIGRMRTRLVRKR---FLCLGWGLPALVVAVsvgFTRTKGYGTASYCWLSL 144
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 310 AGNLKWIVQIPILTAIVVNFLLFLNIIRVLAT------KLRETNAG-----------RCD-------------TRQQYRK 359
Cdd:cd15988 145 EGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMSrdgisdKSKKQRAGseaepcsslllKCSkcgvvssaamssaTASSAMA 224
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18859287 360 LLKSTLVLMPLFGVHYI-VFMAMpyTEVSGVLWQIQMhyeMLFNSVQGFFVAIIYCFCNGEVQAEIK 425
Cdd:cd15988 225 SLWSSCVVLPLLALTWMsAVLAM--TDRRSILFQVLF---AVFNSVQGFVIITVHCFLRREVQDVVK 286
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
237-430 8.91e-06

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 47.57  E-value: 8.91e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 237 VAVTLFL-YFLATNYYWILVEGLYLHSLIFMTFFSD-RKYLWGFTLIGWGVPAMFVTIWASVRATLA------------- 301
Cdd:cd15996  71 ITVAVLLhFFLLATFTWMGLEAIHMYIALVKVFNTYiRRYILKFCIIGWGLPALIVSIVLASTNDNYgygyygkdkdgqg 150
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 302 -DTECWDLSagnlKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAGRCD--TRQQYRKLLKSTLVLMPLFGVHY-IV 377
Cdd:cd15996 151 gDEFCWIKN----PVVFYVTCAAYFGIMFLMNVAMFIVVMVQICGRNGKRSNrtLREEILRNLRSVVSLTFLLGMTWgFA 226
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 18859287 378 FMAMpytevsGVLWQIQMHYEMLFNSVQGFFVAIIYCFCNGEVQaeikKAWNR 430
Cdd:cd15996 227 FFAW------GPVNLAFMYLFTIFNSLQGLFIFVFHCALKENVQ----KQWRR 269
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
235-425 1.58e-05

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 46.52  E-value: 1.58e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 235 CKVAVTLFLYFLATNYYWILVEGlYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTIwaSVRATLAD-----TECWDLS 309
Cdd:cd15990  71 CTLVAAFLHFFFLSSFCWVLTEA-WQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAI--SVGFTKAKgygtvNYCWLSL 147
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 310 AGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNAgrcDTRQQYRKLLKSTLVLMPLFGVHYIVfMAMPYTEVSGV 389
Cdd:cd15990 148 EGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKDGITDK---KLKERAGASLWSSCVVLPLLALTWMS-AVLAITDRRSA 223
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 18859287 390 LWQIQMhyeMLFNSVQGFFVAIIYCFCNGEVQAEIK 425
Cdd:cd15990 224 LFQILF---AVFDSLEGFVIVMVHCILRREVQDAVK 256
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
142-428 2.07e-05

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 46.45  E-value: 2.07e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 142 DRLYLIYTVGYSISLGSLMVATVILGYFRRLhctRNyIHMHLFLSFMlraISIFVKDVVLYSGSALQEMeritvedlksi 221
Cdd:cd15039   2 SILGILTLIGLIISLVFLLLTLAVYALLPEL---RN-LHGKCLMCLV---LSLFVAYLLLLIGQLLSSG----------- 63
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 222 teappanktQFIGCKVAVTLFLYFLATNYYWILVEGLYLH-----SLIFMTFFSDRKYLWGFTLIGWGVPAMFVTI---- 292
Cdd:cd15039  64 ---------DSTLCVALGILLHFFFLAAFFWLNVMSFDIWrtfrgKRSSSSRSKERKRFLRYSLYAWGVPLLLVAVtiiv 134
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 293 -----WASVRATLADTECWdLSAGNLKWI-VQIPILTAIVVNFLLFL---NIIRVLATKLRETNAGRCDTRQQYRKLLKS 363
Cdd:cd15039 135 dfspnTDSLRPGYGEGSCW-ISNPWALLLyFYGPVALLLLFNIILFIltaIRIRKVKKETAKVQSRLRSDKQRFRLYLKL 213
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18859287 364 TlVLMplfGVHYIVFMAMPYTEVSGVLWQIQmhyeMLFNSVQGFFVAIIYCfCNGEVQAEIKKAW 428
Cdd:cd15039 214 F-VIM---GVTWILEIISWFVGGSSVLWYIF----DILNGLQGVFIFLIFV-CKRRVLRLLKKKI 269
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
144-414 1.18e-04

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 43.98  E-value: 1.18e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 144 LYLIYTVGYSISLGSLMvATVILGYFRRLHCTRN--YIHMHLFLSFMLRAISIFVKDVVLYSGSAlqemeritvedlksi 221
Cdd:cd15443   4 LTYISIVGCSISAAASL-LTILLHFFSRKQPKDSttRIHMNLLGSLFLLNGSFLLSPPLATSQST--------------- 67
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 222 teappanktqfIGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMTFFSD-RKYLWGFTLIGWGVPAMFVTIWASVRATL 300
Cdd:cd15443  68 -----------WLCRAAAALLHYSLLCCLTWMAIEGFHLYLLLVKVYNIYiRRYVLKLCVLGWGLPALIVLLVLIFKREA 136
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 301 ADTECWDLSAG----NLKWIVQIPILTAIVVNF----LLFLNIIRVLATK-LRETNAGRCDTRQQYRKLLKSTLVLMPLF 371
Cdd:cd15443 137 YGPHTIPTGTGyqnaSMCWITSSKVHYVLVLGYagltSLFNLVVLAWVVRmLRRLRSRKQELGERARRDWVTVLGLTCLL 216
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 18859287 372 GVHYIV-FMAMpytevsGVLWQIQMHYEMLFNSVQGFFVAIIYC 414
Cdd:cd15443 217 GTTWALaFFSF------GVFLIPQLFLFTIINSLYGFFICLWYC 254
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
235-415 4.02e-04

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 42.48  E-value: 4.02e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 235 CKVAVTLFLYFLATNYYWILVEGLYLHSL---IFMTFFsdRKYLWGFTLIGWGVPAMFVTIWASVRA----TLADTE--- 304
Cdd:cd15442  74 CKALGGVTHYFLLCCFTWMAIEAFHLYLLaikVFNTYI--HHYFAKLCLVGWGFPALVVTITGSINSygayTIMDMAnrt 151
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 305 ----CWDLSAGNLkwIVQIPILTAIVVNFLLFLNIIRVLATK---LRETNAGRcdTRQQYRKLLKSTLVLMPLFGVHY-I 376
Cdd:cd15442 152 tlhlCWINSKHLT--VHYITVCGYFGLTFLFNTVVLGLVAWKifhLQSATAGK--EKCQAWKGGLTVLGLSCLLGVTWgL 227
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 18859287 377 VFMAMPYTEVSGVlwqiqmHYEMLFNSVQGFFVAIIYCF 415
Cdd:cd15442 228 AFFTYGSMSVPTV------YIFALLNSLQGLFIFIWFVI 260
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
235-421 2.12e-03

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 40.44  E-value: 2.12e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 235 CKVAVTLFLYFLATNYYWILVEGlYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMFVTI---WASVRATLADTECWDLSAG 311
Cdd:cd15989  70 CTMTTAFLHFFFLASFCWVLTEA-WQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVAIsmgFTKAKGYGTPHYCWLSLEG 148
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 312 NLKWIVQIP----ILTAIVVNFLLFLNIIR---VLATKLRE-----------------------TNAGRCDTRQQYRKLL 361
Cdd:cd15989 149 GLLYAFVGPaaavVLVNMVIGILVFNKLVSrdgILDKKLKHragqmsephsgltlkcakcgvvsTTALSATTASNAMASL 228
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859287 362 KSTLVLMPLFGVHYIVfMAMPYTEVSGVLWQIQMhyeMLFNSVQGFFVAIIYCFCNGEVQ 421
Cdd:cd15989 229 WSSCVVLPLLALTWMS-AVLAMTDKRSILFQILF---AVFDSLQGFVIVMVHCILRREVQ 284
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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