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Conserved domains on  [gi|20128893|ref|NP_569953|]
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uncharacterized protein Dmel_CG14817, isoform A [Drosophila melanogaster]

Protein Classification

MRP-63 domain-containing protein( domain architecture ID 10633175)

MRP-63 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MRP-63 pfam14978
Mitochondrial ribosome protein 63; This family of proteins is present in the intact 55S ...
 14-105 1.30e-28

Mitochondrial ribosome protein 63; This family of proteins is present in the intact 55S subunit of the mitochondrial ribosome. It is not known if it belongs to the 28S or to the 39S subunit.


:

Pssm-ID: 434363  Cd Length: 90  Bit Score: 98.87  E-value: 1.30e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20128893    14 PGHIFRGKRRLVKPVSQRAMDTLTHEYERQEQVMLLLRHPYLTMEQSFGHAKELQKREKLvARWTDEQTlRKMKPHVTIE 93
Cdd:pfam14978   1 PGKQWIGKHRRVRPVSLQMKRNLIRRLEIEEENMYWLSRPYLTKEQESGHAKELRKQEKW-EKIKDEQR-AKFPPHVTIA 78

                          90
                  ....*....|..
gi 20128893    94 ERLNQLKIKEAW 105
Cdd:pfam14978  79 DRLDHLNVTKKW 90
 
Name Accession Description Interval E-value
MRP-63 pfam14978
Mitochondrial ribosome protein 63; This family of proteins is present in the intact 55S ...
 14-105 1.30e-28

Mitochondrial ribosome protein 63; This family of proteins is present in the intact 55S subunit of the mitochondrial ribosome. It is not known if it belongs to the 28S or to the 39S subunit.


Pssm-ID: 434363  Cd Length: 90  Bit Score: 98.87  E-value: 1.30e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20128893    14 PGHIFRGKRRLVKPVSQRAMDTLTHEYERQEQVMLLLRHPYLTMEQSFGHAKELQKREKLvARWTDEQTlRKMKPHVTIE 93
Cdd:pfam14978   1 PGKQWIGKHRRVRPVSLQMKRNLIRRLEIEEENMYWLSRPYLTKEQESGHAKELRKQEKW-EKIKDEQR-AKFPPHVTIA 78

                          90
                  ....*....|..
gi 20128893    94 ERLNQLKIKEAW 105
Cdd:pfam14978  79 DRLDHLNVTKKW 90
 
Name Accession Description Interval E-value
MRP-63 pfam14978
Mitochondrial ribosome protein 63; This family of proteins is present in the intact 55S ...
 14-105 1.30e-28

Mitochondrial ribosome protein 63; This family of proteins is present in the intact 55S subunit of the mitochondrial ribosome. It is not known if it belongs to the 28S or to the 39S subunit.


Pssm-ID: 434363  Cd Length: 90  Bit Score: 98.87  E-value: 1.30e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20128893    14 PGHIFRGKRRLVKPVSQRAMDTLTHEYERQEQVMLLLRHPYLTMEQSFGHAKELQKREKLvARWTDEQTlRKMKPHVTIE 93
Cdd:pfam14978   1 PGKQWIGKHRRVRPVSLQMKRNLIRRLEIEEENMYWLSRPYLTKEQESGHAKELRKQEKW-EKIKDEQR-AKFPPHVTIA 78

                          90
                  ....*....|..
gi 20128893    94 ERLNQLKIKEAW 105
Cdd:pfam14978  79 DRLDHLNVTKKW 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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