NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|30697420|ref|NP_568927|]
View 

electron transporter, putative (Protein of unknown function, DUF547) [Arabidopsis thaliana]

Protein Classification

leucine-zipper of ternary complex factor MIP1 family protein( domain architecture ID 10627546)

leucine-zipper of ternary complex factor MIP1 family protein similar to Antirrhinum majus ternary complex factor MIP1, subunit of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation; also contains a DUF547 domain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 474-597 1.62e-46

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


:

Pssm-ID: 461427  Cd Length: 119  Bit Score: 160.44  E-value: 1.62e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30697420   474 HQQKLAFWINMFNACVMHGYLQHGVPKTAERLQSLvYNKATMNVGGKNISAHTIEHCILRKSTSStmtqDRHEEMIIRKL 553
Cdd:pfam04784   1 REEKLAFWINLYNALTIHAILYPGIPPSPWKRRSL-FDKAAYNIGGHKYSLDDIEHGILRGNPSN----LKKPFGDPRRK 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 30697420   554 YGVEATDPNITFALSCGTRSSPAVRIYTGEGVTTELEKSKLEYL 597
Cdd:pfam04784  76 YALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAREFL 119
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 72-153 2.45e-17

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


:

Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 77.21  E-value: 2.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30697420    72 GQQKKEEIEKEVWMLREMLDQEEKTREILEQVqkHQLPSSSSSLTLPASLPPKMKELITELSIVEGEISRLEIQISHLQI 151
Cdd:pfam14389   2 LNEKRSSLEQEVEQLQEQLQDEEDLRRALEKA--LSNSPDGSLPSLSSLLPPKAKELLAEIAVLEAEVARLEQKLLSLYR 79


                  ..
gi 30697420   152 NL 153
Cdd:pfam14389  80 KL 81
 
Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 474-597 1.62e-46

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


Pssm-ID: 461427  Cd Length: 119  Bit Score: 160.44  E-value: 1.62e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30697420   474 HQQKLAFWINMFNACVMHGYLQHGVPKTAERLQSLvYNKATMNVGGKNISAHTIEHCILRKSTSStmtqDRHEEMIIRKL 553
Cdd:pfam04784   1 REEKLAFWINLYNALTIHAILYPGIPPSPWKRRSL-FDKAAYNIGGHKYSLDDIEHGILRGNPSN----LKKPFGDPRRK 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 30697420   554 YGVEATDPNITFALSCGTRSSPAVRIYTGEGVTTELEKSKLEYL 597
Cdd:pfam04784  76 YALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAREFL 119
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 72-153 2.45e-17

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 77.21  E-value: 2.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30697420    72 GQQKKEEIEKEVWMLREMLDQEEKTREILEQVqkHQLPSSSSSLTLPASLPPKMKELITELSIVEGEISRLEIQISHLQI 151
Cdd:pfam14389   2 LNEKRSSLEQEVEQLQEQLQDEEDLRRALEKA--LSNSPDGSLPSLSSLLPPKAKELLAEIAVLEAEVARLEQKLLSLYR 79


                  ..
gi 30697420   152 NL 153
Cdd:pfam14389  80 KL 81
 
Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 474-597 1.62e-46

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


Pssm-ID: 461427  Cd Length: 119  Bit Score: 160.44  E-value: 1.62e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30697420   474 HQQKLAFWINMFNACVMHGYLQHGVPKTAERLQSLvYNKATMNVGGKNISAHTIEHCILRKSTSStmtqDRHEEMIIRKL 553
Cdd:pfam04784   1 REEKLAFWINLYNALTIHAILYPGIPPSPWKRRSL-FDKAAYNIGGHKYSLDDIEHGILRGNPSN----LKKPFGDPRRK 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 30697420   554 YGVEATDPNITFALSCGTRSSPAVRIYTGEGVTTELEKSKLEYL 597
Cdd:pfam04784  76 YALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAREFL 119
Lzipper-MIP1 pfam14389
Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus ...
 72-153 2.45e-17

Leucine-zipper of ternary complex factor MIP1; This leucine-zipper is towards the N-terminus of MIP1 proteins. These proteins, here largely from plants, are subunits of the TORC2 (rictor-mTOR) protein complex controlling cell growth and proliferation. The leucine-zipper is likely to be the region that interacts with plant MADS-box factors,


Pssm-ID: 464163 [Multi-domain]  Cd Length: 82  Bit Score: 77.21  E-value: 2.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30697420    72 GQQKKEEIEKEVWMLREMLDQEEKTREILEQVqkHQLPSSSSSLTLPASLPPKMKELITELSIVEGEISRLEIQISHLQI 151
Cdd:pfam14389   2 LNEKRSSLEQEVEQLQEQLQDEEDLRRALEKA--LSNSPDGSLPSLSSLLPPKAKELLAEIAVLEAEVARLEQKLLSLYR 79


                  ..
gi 30697420   152 NL 153
Cdd:pfam14389  80 KL 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH