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Conserved domains on  [gi|18413888|ref|NP_567395|]
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Gamma interferon responsive lysosomal thiol (GILT) reductase family protein [Arabidopsis thaliana]

Protein Classification

GILT family protein( domain architecture ID 10505223)

gamma interferon inducible lysosomal thiol reductase (GILT) family protein similar to Homo sapiens GILT that is a lysosomal thiol reductase which can reduce protein disulfide bonds

EC:  1.8.-.-
Gene Ontology:  GO:0016671
PubMed:  10852914

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GILT pfam03227
Gamma interferon inducible lysosomal thiol reductase (GILT); This family includes the two ...
 43-137 2.18e-37

Gamma interferon inducible lysosomal thiol reductase (GILT); This family includes the two characterized human gamma-interferon-inducible lysosomal thiol reductase (GILT) sequences: Swiss:P13284 and Swiss:Q9UL08. It also contains several other eukaryotic putative proteins with similarity to GILT. The aligned region contains three conserved cysteine residues. In addition, the two GILT sequences possess a C-X(2)-C motif that is shared by some of the other sequences in the family. This motif is thought to be associated with disulphide bond reduction.


:

Pssm-ID: 460853  Cd Length: 102  Bit Score: 126.29  E-value: 2.18e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18413888    43 LYYESLCPYCQNFIVDDLGKIFDSDLLKITDLKLVPFGNAHISNN---LTITCQHGEEECKLNALEACGIRTLPDPKLQY 119
Cdd:pfam03227   2 VYYESLCPDSRRFITQQLLPTYRLKLQDIMDLTLVPFGKAKVNSSgsgWGFTCQHGPEECLGNKLQACAIKLLPDQDQAL 81

                          90       100
                  ....*....|....*....|.
gi 18413888   120 KFIRCVEKD---TNEWESCVK 137
Cdd:pfam03227  82 PFIACMESSndpDEAAEKCAE 102
 
Name Accession Description Interval E-value
GILT pfam03227
Gamma interferon inducible lysosomal thiol reductase (GILT); This family includes the two ...
 43-137 2.18e-37

Gamma interferon inducible lysosomal thiol reductase (GILT); This family includes the two characterized human gamma-interferon-inducible lysosomal thiol reductase (GILT) sequences: Swiss:P13284 and Swiss:Q9UL08. It also contains several other eukaryotic putative proteins with similarity to GILT. The aligned region contains three conserved cysteine residues. In addition, the two GILT sequences possess a C-X(2)-C motif that is shared by some of the other sequences in the family. This motif is thought to be associated with disulphide bond reduction.


Pssm-ID: 460853  Cd Length: 102  Bit Score: 126.29  E-value: 2.18e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18413888    43 LYYESLCPYCQNFIVDDLGKIFDSDLLKITDLKLVPFGNAHISNN---LTITCQHGEEECKLNALEACGIRTLPDPKLQY 119
Cdd:pfam03227   2 VYYESLCPDSRRFITQQLLPTYRLKLQDIMDLTLVPFGKAKVNSSgsgWGFTCQHGPEECLGNKLQACAIKLLPDQDQAL 81

                          90       100
                  ....*....|....*....|.
gi 18413888   120 KFIRCVEKD---TNEWESCVK 137
Cdd:pfam03227  82 PFIACMESSndpDEAAEKCAE 102
 
Name Accession Description Interval E-value
GILT pfam03227
Gamma interferon inducible lysosomal thiol reductase (GILT); This family includes the two ...
 43-137 2.18e-37

Gamma interferon inducible lysosomal thiol reductase (GILT); This family includes the two characterized human gamma-interferon-inducible lysosomal thiol reductase (GILT) sequences: Swiss:P13284 and Swiss:Q9UL08. It also contains several other eukaryotic putative proteins with similarity to GILT. The aligned region contains three conserved cysteine residues. In addition, the two GILT sequences possess a C-X(2)-C motif that is shared by some of the other sequences in the family. This motif is thought to be associated with disulphide bond reduction.


Pssm-ID: 460853  Cd Length: 102  Bit Score: 126.29  E-value: 2.18e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18413888    43 LYYESLCPYCQNFIVDDLGKIFDSDLLKITDLKLVPFGNAHISNN---LTITCQHGEEECKLNALEACGIRTLPDPKLQY 119
Cdd:pfam03227   2 VYYESLCPDSRRFITQQLLPTYRLKLQDIMDLTLVPFGKAKVNSSgsgWGFTCQHGPEECLGNKLQACAIKLLPDQDQAL 81

                          90       100
                  ....*....|....*....|.
gi 18413888   120 KFIRCVEKD---TNEWESCVK 137
Cdd:pfam03227  82 PFIACMESSndpDEAAEKCAE 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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