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Conserved domains on  [gi|18412649|ref|NP_567140|]
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Chalcone-flavanone isomerase family protein [Arabidopsis thaliana]

Protein Classification

chalcone isomerase domain-containing protein; chalcone isomerase family protein( domain architecture ID 10011018)

chalcone isomerase domain-containing protein, similar to fungal altered inheritance of mitochondria proteins 18 and 46| chalcone isomerase family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03174 PLN03174
Chalcone-flavanone isomerase-related; Provisional
 1-278 5.43e-176

Chalcone-flavanone isomerase-related; Provisional


:

Pssm-ID: 215613  Cd Length: 278  Bit Score: 486.28  E-value: 5.43e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649    1 MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAiaaSRNPSHPILEWAFSSHRSSLSPWGSITLADES--- 77
Cdd:PLN03174   1 MVSLRFPFSFSQPPRAPSFFAAAAAVAAAAAAAAAAAAAIAA---SRNPPHPFLQNALNFHNSSSPPWASISLADPSpps 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   78 VVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEAD 157
Cdd:PLN03174  78 VVESKTGVSFPAEIGDSRRLLGVGLRKKSILGLKNIDVYAFGVYADDDDLKKLLGEKYGKLSASELKGNKEFIDDLMEAD 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649  158 IKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVAIEGNH 237
Cdd:PLN03174 158 IKMTVRLQIVYGKLSIRSVRSAFEESVGSRLQKFGGSDNKELLQSFTSLFKDEYKIPKGSVIDLSREPGHVLRTTIDGKE 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 18412649  238 VGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASLAFD 278
Cdd:PLN03174 238 VGSIQSKLLCRSILDLYIGEDPFDKNAKEDIEENLASLLQD 278
 
Name Accession Description Interval E-value
PLN03174 PLN03174
Chalcone-flavanone isomerase-related; Provisional
 1-278 5.43e-176

Chalcone-flavanone isomerase-related; Provisional


Pssm-ID: 215613  Cd Length: 278  Bit Score: 486.28  E-value: 5.43e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649    1 MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAiaaSRNPSHPILEWAFSSHRSSLSPWGSITLADES--- 77
Cdd:PLN03174   1 MVSLRFPFSFSQPPRAPSFFAAAAAVAAAAAAAAAAAAAIAA---SRNPPHPFLQNALNFHNSSSPPWASISLADPSpps 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   78 VVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEAD 157
Cdd:PLN03174  78 VVESKTGVSFPAEIGDSRRLLGVGLRKKSILGLKNIDVYAFGVYADDDDLKKLLGEKYGKLSASELKGNKEFIDDLMEAD 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649  158 IKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVAIEGNH 237
Cdd:PLN03174 158 IKMTVRLQIVYGKLSIRSVRSAFEESVGSRLQKFGGSDNKELLQSFTSLFKDEYKIPKGSVIDLSREPGHVLRTTIDGKE 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 18412649  238 VGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASLAFD 278
Cdd:PLN03174 238 VGSIQSKLLCRSILDLYIGEDPFDKNAKEDIEENLASLLQD 278
Chalcone_2 pfam16035
Chalcone isomerase like;
96-268 4.91e-14

Chalcone isomerase like;


Pssm-ID: 435089  Cd Length: 203  Bit Score: 69.15  E-value: 4.91e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649    96 RLLGVGLRKKSLLGLKnidVYAFGVYADCDDVKKL---VGDKYANLPASEIRGNKS-----------------FMDDLME 155
Cdd:pfam16035   4 TLLGLGVRTVSFLSIK---VYVVGIYIATSDIAKLqkvLNSTYLSKNFIDTDLVKSekenlkkalldpekseeLIENLLD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   156 ADIKMTIRLQIVYgKLNIRSVRNAFQESVGNRLKKFGGSDNDEL---LQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVA 232
Cdd:pfam16035  81 SGIRTAARIVPVR-NTDFGHLRDGFVRAILARPKAKYEYDDEEFgegLKEFKSLFPRKGSVPKGDELLLERDANGSLSVS 159

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 18412649   233 IEGN------HVGSVKSHLLCRSILDLYI-GEEPFDKNAREDF 268
Cdd:pfam16035 160 YDGKkkkeveKLGTVEDPRVSRLLFLQYLsGKKPLSEPARKSV 202
 
Name Accession Description Interval E-value
PLN03174 PLN03174
Chalcone-flavanone isomerase-related; Provisional
 1-278 5.43e-176

Chalcone-flavanone isomerase-related; Provisional


Pssm-ID: 215613  Cd Length: 278  Bit Score: 486.28  E-value: 5.43e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649    1 MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAiaaSRNPSHPILEWAFSSHRSSLSPWGSITLADES--- 77
Cdd:PLN03174   1 MVSLRFPFSFSQPPRAPSFFAAAAAVAAAAAAAAAAAAAIAA---SRNPPHPFLQNALNFHNSSSPPWASISLADPSpps 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   78 VVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEAD 157
Cdd:PLN03174  78 VVESKTGVSFPAEIGDSRRLLGVGLRKKSILGLKNIDVYAFGVYADDDDLKKLLGEKYGKLSASELKGNKEFIDDLMEAD 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649  158 IKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVAIEGNH 237
Cdd:PLN03174 158 IKMTVRLQIVYGKLSIRSVRSAFEESVGSRLQKFGGSDNKELLQSFTSLFKDEYKIPKGSVIDLSREPGHVLRTTIDGKE 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 18412649  238 VGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASLAFD 278
Cdd:PLN03174 238 VGSIQSKLLCRSILDLYIGEDPFDKNAKEDIEENLASLLQD 278
PLN03175 PLN03175
hypothetical protein; Provisional
 76-275 9.38e-43

hypothetical protein; Provisional


Pssm-ID: 178719  Cd Length: 415  Bit Score: 150.70  E-value: 9.38e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   76 ESVVEPKTGFSFPA------SIGDSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSF 149
Cdd:PLN03175 206 RDAVEPRTGIEFPMlldennSSLTSEVLVGTGSRTMKIIRIKSLKVYAFGFYVHPNSVCEKLGPKYASVPASELKKCPDF 285

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649  150 MDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVL 229
Cdd:PLN03175 286 YEDLLREDIVMTVRLVVNYNGLKINTVRDAFEKSLRNRLQKMNPNTDYNCLKTFGSFFTEDIPIPAGTKIDFRRTSDGQL 365

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 18412649  230 SVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASL 275
Cdd:PLN03175 366 ITEIGGNQIGAVRSKDLCRAFFDMYIGDVPVSEQTKEEIGQNVAGI 411
Chalcone_2 pfam16035
Chalcone isomerase like;
96-268 4.91e-14

Chalcone isomerase like;


Pssm-ID: 435089  Cd Length: 203  Bit Score: 69.15  E-value: 4.91e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649    96 RLLGVGLRKKSLLGLKnidVYAFGVYADCDDVKKL---VGDKYANLPASEIRGNKS-----------------FMDDLME 155
Cdd:pfam16035   4 TLLGLGVRTVSFLSIK---VYVVGIYIATSDIAKLqkvLNSTYLSKNFIDTDLVKSekenlkkalldpekseeLIENLLD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   156 ADIKMTIRLQIVYgKLNIRSVRNAFQESVGNRLKKFGGSDNDEL---LQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVA 232
Cdd:pfam16035  81 SGIRTAARIVPVR-NTDFGHLRDGFVRAILARPKAKYEYDDEEFgegLKEFKSLFPRKGSVPKGDELLLERDANGSLSVS 159

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 18412649   233 IEGN------HVGSVKSHLLCRSILDLYI-GEEPFDKNAREDF 268
Cdd:pfam16035 160 YDGKkkkeveKLGTVEDPRVSRLLFLQYLsGKKPLSEPARKSV 202
Chalcone_3 pfam16036
Chalcone isomerase-like; Chalcone_3 is a family of largely bacterial members.
 84-269 5.63e-08

Chalcone isomerase-like; Chalcone_3 is a family of largely bacterial members.


Pssm-ID: 435090  Cd Length: 165  Bit Score: 51.42  E-value: 5.63e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649    84 GFSFPASI---GDSRRLLGVGLRKKsllglKNIDVYAFGVYadcddvkklvgdkyanLPASeirgnKSFMDDLMEADiKM 160
Cdd:pfam16036   6 GVKLPDTVtvgGKELVLNGAGLRSK-----FFFKVYVAGLY----------------LPEK-----STDAQAILAAP-GK 58

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   161 TIRLQIVYGKLNIRSVRNA----FQESVGNRLKKFggsdnDELLQSFTSLFKDEYKipRNSTIDLTKDPGHVLSVAIEGN 236
Cdd:pfam16036  59 AIRLHILSRDVDSDKLKDAftegFENNTGGELASL-----KPRIDRFKAAFAAEVK--KGDVFTLDYLPGTGTVVYKNGK 131

                         170       180       190
                  ....*....|....*....|....*....|...
gi 18412649   237 HVGSVKSHLLCRSILDLYIGEEPFDKNAREDFL 269
Cdd:pfam16036 132 PLGTIPGEDFAKALLGIWLGEKPADDSLKDGLL 164
PLN02804 PLN02804
chalcone isomerase
 84-258 4.74e-05

chalcone isomerase


Pssm-ID: 178401  Cd Length: 206  Bit Score: 43.26  E-value: 4.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649   84 GFSFPASIGDSRRLLgvglrkkSLLGLKNIDV---------YAFGVYADCDDVKKLvgDKYANLPASEIRGNKSFMDDLM 154
Cdd:PLN02804   8 DIPFPPQITTSSKPL-------SLLGHGITDIeihflqikfTAIGVYLEPSVKGHL--QSWKGKPGSELAEDDDFFQALI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18412649  155 EADIKMTIRLQIVYGKLNIRsVRNAFQESVGNRL---KKFgGSDNDELLQSFTSLFKDEYkIPRNSTI--DLTKDPGHV- 228
Cdd:PLN02804  79 QAPVEKLIRIVVIKEIKGSQ-YGVQLESSVRDRLaedDKY-EEEEEEALEKVVEFFQSKY-FKKNSIItyHFPATSGIVe 155

                        170       180       190
                 ....*....|....*....|....*....|..
gi 18412649  229 LSVAIEGNHVGS--VKSHLLCRSILDLYIGEE 258
Cdd:PLN02804 156 ISFSTEGKEESKltVENANVVEMIQKWYLGGE 187
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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