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Conserved domains on  [gi|18401116|ref|NP_566546|]
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nitrile specifier protein 1 [Arabidopsis thaliana]

Protein Classification

Kelch domain-containing protein; kelch repeat and BTB domain-containing protein( domain architecture ID 11476525)

Kelch domain-containing protein is a protein that contains one or more kelch domains which play a role in a variety of cellular processes, including cell signaling, transcription regulation, and protein degradation.| kelch repeat and BTB (BR-C, ttk and bab)/POZ (Pox virus and Zinc finger) domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
 1-470 0e+00

nitrile-specifier protein


:

Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 1032.60  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116    1 MAQKLEAKGGEMGDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80
Cdd:PLN02193   1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116   81 REKVNDMTSEMITFLSIKTFKGKTSHPIEKRPGVKFVLHGGKIVGFHGRSTDVLHSLGAYVSLSSTIKLLGKWIKVEQKG 160
Cdd:PLN02193  81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQGGKIVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDAS 240
Cdd:PLN02193 161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSTPGDSLTARG 320
Cdd:PLN02193 241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRG 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAIGKHIVIFGGEIAMDPLAHVGPGQL 400
Cdd:PLN02193 321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQL 400

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  401 TDGTFALDTETLQWERLDKFGGEEETPSSRGWTASTTATIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02193 401 TDGTFALDTETLQWERLDKFGEEEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
 
Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
 1-470 0e+00

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 1032.60  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116    1 MAQKLEAKGGEMGDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80
Cdd:PLN02193   1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116   81 REKVNDMTSEMITFLSIKTFKGKTSHPIEKRPGVKFVLHGGKIVGFHGRSTDVLHSLGAYVSLSSTIKLLGKWIKVEQKG 160
Cdd:PLN02193  81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQGGKIVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDAS 240
Cdd:PLN02193 161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSTPGDSLTARG 320
Cdd:PLN02193 241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRG 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAIGKHIVIFGGEIAMDPLAHVGPGQL 400
Cdd:PLN02193 321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQL 400

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  401 TDGTFALDTETLQWERLDKFGGEEETPSSRGWTASTTATIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02193 401 TDGTFALDTETLQWERLDKFGEEEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 13-142 4.79e-56

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 182.48  E-value: 4.79e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116    13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYREKVNDMTSEM 91
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDyPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 18401116    92 ITFLSIKTFKGKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:pfam01419  81 ITSLTFKTNKGRTSPFFGTPSGTKFSLevKGKKIVGFHGRAGNALNALGAYFA 133
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 13-142 9.26e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 141.98  E-value: 9.26e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116     13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGsQVVVGDEHGKKTELGvEEFEIDADDYIVYVEGYREKVNDMTSemi 92
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKG-GKVWGDEHGGKGGTG-EEILLYPGEYITSVEGTYDKSGVITS--- 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 18401116     93 tfLSIKTFKGKTSHPIEKRPGVKFVLH---GGKIVGFHGR-STDVLHSLGAYVS 142
Cdd:smart00915  76 --LTFKTNKGRTSPFGGYEGGTKFVLEskeGKKIVGFHGRsSGDGLDSLGAYFS 127
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 13-142 7.68e-32

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 118.44  E-value: 7.68e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  13 GDVWDDGVY-ENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTElGVEEFEIDA-DDYIVYVEGYREKVNDmtSE 90
Cdd:cd09612   1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYpDEYITSVSGTYGPVSG--SN 77

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 18401116  91 MITFLSIKTFKgKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:cd09612  78 VITSLTFKTNK-RTYGPFGVESGTPFSLpvEGGKIVGFHGRSGDYLDAIGVYVS 130
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
163-443 4.12e-30

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 118.33  E-value: 4.12e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 163 PGLRCSHGIAQVGNKIYSFGGeFTPNQPIDKhLYVFDLETRTWSispATGDVPHLSCLGVRMVSVGSTLYVFGGRDA--- 239
Cdd:COG3055  10 PTPRSEAAAALLDGKVYVAGG-LSGGSASNS-FEVYDPATNTWS---ELAPLPGPPRHHAAAVAQDGKLYVFGGFTGanp 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 240 -SRQYNGFYSFDTTTNEWKLLTPVeegPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWfhcSTPGDSLTA 318
Cdd:COG3055  85 sSTPLNDVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTW---TQLAPLPTP 158

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 319 RGG-AGLEVVQGKVWVVYGFNGcevddvhyyDPVQDKWTQVETFgvrPSERSVFASAAIGKHIVIFGGEiamdplahvgp 397
Cdd:COG3055 159 RDHlAAAVLPDGKILVIGGRNG---------SGFSNTWTTLAPL---PTARAGHAAAVLGGKILVFGGE----------- 215

                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 18401116 398 GQLTDGTFALDTETLQWERLDkfggeeETPSSRGWTAstTATIDGK 443
Cdd:COG3055 216 SGFSDEVEAYDPATNTWTALG------ELPTPRHGHA--AVLTDGK 253
 
Name Accession Description Interval E-value
PLN02193 PLN02193
nitrile-specifier protein
 1-470 0e+00

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 1032.60  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116    1 MAQKLEAKGGEMGDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80
Cdd:PLN02193   1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116   81 REKVNDMTSEMITFLSIKTFKGKTSHPIEKRPGVKFVLHGGKIVGFHGRSTDVLHSLGAYVSLSSTIKLLGKWIKVEQKG 160
Cdd:PLN02193  81 REKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVLQGGKIVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDAS 240
Cdd:PLN02193 161 EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDAS 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSTPGDSLTARG 320
Cdd:PLN02193 241 RQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRG 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAIGKHIVIFGGEIAMDPLAHVGPGQL 400
Cdd:PLN02193 321 GAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQL 400

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  401 TDGTFALDTETLQWERLDKFGGEEETPSSRGWTASTTATIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02193 401 TDGTFALDTETLQWERLDKFGEEEETPSSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGIDSA 470
PLN02153 PLN02153
epithiospecifier protein
 149-470 3.36e-152

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 436.34  E-value: 3.36e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  149 LLGKWIKVEQKG-EGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSV 227
Cdd:PLN02153   5 LQGGWIKVEQKGgKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEE--GPTPRSFHSMAADEENVYVFGGVS------ATARLNTLDSY 299
Cdd:PLN02153  85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEegGPEARTFHSMASDENHVYVFGGVSkgglmkTPERFRTIEAY 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  300 NIVDKKWFHCSTPGDSLTARGGAGLEVVQGKVWVVYGF---------NGCEVDDVHYYDPVQDKWTQVETFGVRPSERSV 370
Cdd:PLN02153 165 NIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFatsilpggkSDYESNAVQFFDPASGKWTEVETTGAKPSARSV 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  371 FASAAIGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWErldKFGGEEETPSSRGWTASTTATIDGKKGLVMHG 450
Cdd:PLN02153 245 FAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWE---KLGECGEPAMPRGWTAYTTATVYGKNGLLMHG 321

                        330       340
                 ....*....|....*....|
gi 18401116  451 GKAPTNDRFDDLFFYGIDSA 470
Cdd:PLN02153 322 GKLPTNERTDDLYFYAVNSA 341
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 13-142 4.79e-56

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 182.48  E-value: 4.79e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116    13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYREKVNDMTSEM 91
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDyPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 18401116    92 ITFLSIKTFKGKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:pfam01419  81 ITSLTFKTNKGRTSPFFGTPSGTKFSLevKGKKIVGFHGRAGNALNALGAYFA 133
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 13-142 9.26e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 141.98  E-value: 9.26e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116     13 GDVWDDGVYENVRKVYVGQAQYGIAFVKFEYVNGsQVVVGDEHGKKTELGvEEFEIDADDYIVYVEGYREKVNDMTSemi 92
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKG-GKVWGDEHGGKGGTG-EEILLYPGEYITSVEGTYDKSGVITS--- 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 18401116     93 tfLSIKTFKGKTSHPIEKRPGVKFVLH---GGKIVGFHGR-STDVLHSLGAYVS 142
Cdd:smart00915  76 --LTFKTNKGRTSPFGGYEGGTKFVLEskeGKKIVGFHGRsSGDGLDSLGAYFS 127
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 13-142 7.68e-32

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 118.44  E-value: 7.68e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  13 GDVWDDGVY-ENVRKVYVGQAQYGIAFVKFEYVNGSQVVVGDEHGKKTElGVEEFEIDA-DDYIVYVEGYREKVNDmtSE 90
Cdd:cd09612   1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYpDEYITSVSGTYGPVSG--SN 77

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 18401116  91 MITFLSIKTFKgKTSHPIEKRPGVKFVL--HGGKIVGFHGRSTDVLHSLGAYVS 142
Cdd:cd09612  78 VITSLTFKTNK-RTYGPFGVESGTPFSLpvEGGKIVGFHGRSGDYLDAIGVYVS 130
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
163-443 4.12e-30

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 118.33  E-value: 4.12e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 163 PGLRCSHGIAQVGNKIYSFGGeFTPNQPIDKhLYVFDLETRTWSispATGDVPHLSCLGVRMVSVGSTLYVFGGRDA--- 239
Cdd:COG3055  10 PTPRSEAAAALLDGKVYVAGG-LSGGSASNS-FEVYDPATNTWS---ELAPLPGPPRHHAAAVAQDGKLYVFGGFTGanp 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 240 -SRQYNGFYSFDTTTNEWKLLTPVeegPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWfhcSTPGDSLTA 318
Cdd:COG3055  85 sSTPLNDVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTW---TQLAPLPTP 158

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 319 RGG-AGLEVVQGKVWVVYGFNGcevddvhyyDPVQDKWTQVETFgvrPSERSVFASAAIGKHIVIFGGEiamdplahvgp 397
Cdd:COG3055 159 RDHlAAAVLPDGKILVIGGRNG---------SGFSNTWTTLAPL---PTARAGHAAAVLGGKILVFGGE----------- 215

                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 18401116 398 GQLTDGTFALDTETLQWERLDkfggeeETPSSRGWTAstTATIDGK 443
Cdd:COG3055 216 SGFSDEVEAYDPATNTWTALG------ELPTPRHGHA--AVLTDGK 253
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
260-457 3.29e-16

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 78.66  E-value: 3.29e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 260 TPVEEGPTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWfhcsTPGDSL--TARGGAGLEVVQGKVWVVYGF 337
Cdd:COG3055   4 SSLPDLPTPRSEAAAALLDGKVYVAGGLSGGSASNSFEVYDPATNTW----SELAPLpgPPRHHAAAVAQDGKLYVFGGF 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 338 NGCE-----VDDVHYYDPVQDKWTQVETFgvrPSERSVFASAAIGKHIVIFGGEIAMDPLAHVgpgqltdgtFALDTETL 412
Cdd:COG3055  80 TGANpsstpLNDVYVYDPATNTWTKLAPM---PTPRGGATALLLDGKIYVVGGWDDGGNVAWV---------EVYDPATG 147

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18401116 413 QWERL-----------------DK---FGGEEETPSSRGWT---------ASTTATIDGKKGLVMHGGKAPTND 457
Cdd:COG3055 148 TWTQLaplptprdhlaaavlpdGKilvIGGRNGSGFSNTWTtlaplptarAGHAAAVLGGKILVFGGESGFSDE 221
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
151-334 2.65e-14

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 72.88  E-value: 2.65e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 151 GKWIKVeqkGEGPGLRCSHGIAQVGNKIYSFGGeFTPNQPIDKHlYVFDLETRTWS-ISPATGDVPHLSClgvrMVSVGS 229
Cdd:COG3055 100 NTWTKL---APMPTPRGGATALLLDGKIYVVGG-WDDGGNVAWV-EVYDPATGTWTqLAPLPTPRDHLAA----AVLPDG 170

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 230 TLYVFGGRDASRQYNGFysfdtttnewkllTPVEEGPTPRSFHSMAADEENVYVFGGVSATarLNTLDSYNIVDKKWfhc 309
Cdd:COG3055 171 KILVIGGRNGSGFSNTW-------------TTLAPLPTARAGHAAAVLGGKILVFGGESGF--SDEVEAYDPATNTW--- 232

                       170       180
                ....*....|....*....|....*
gi 18401116 310 STPGDSLTARGGAGLEVVQGKVWVV 334
Cdd:COG3055 233 TALGELPTPRHGHAAVLTDGKVYVI 257
PHA03098 PHA03098
kelch-like protein; Provisional
 166-306 2.06e-09

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 59.78  E-value: 2.06e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  166 RCSHGIAQVGNKIYSFGGEFTpNQPIDKHLYVFDLETRTWSISPATgDVPHLsclGVRMVSVGSTLYVFGGR---DASRQ 242
Cdd:PHA03098 380 RYNPCVVNVNNLIYVIGGISK-NDELLKTVECFSLNTNKWSKGSPL-PISHY---GGCAIYHDGKIYVIGGIsyiDNIKV 454

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18401116  243 YNGFYSFDTTTNEWKLLTPVEegpTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKW 306
Cdd:PHA03098 455 YNIVESYNPVTNKWTELSSLN---FPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNTW 515
PHA03098 PHA03098
kelch-like protein; Provisional
 151-385 2.39e-09

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 59.40  E-value: 2.39e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  151 GKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVF-----DLETRTWSISpatgDVPHLSCLGVrmV 225
Cdd:PHA03098 218 KKKKIVFNKRCIKIIYSKKYNLNKILPRSSTFGSIIYIHITMSIFTYNyitnySPLSEINTII----DIHYVYCFGS--V 291

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  226 SVGSTLYVFGGRDASRQ-YNGFYSFDTTTNEWKLLTPVEegpTPRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDK 304
Cdd:PHA03098 292 VLNNVIYFIGGMNKNNLsVNSVVSYDTKTKSWNKVPELI---YPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGES 368

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  305 KWfhcSTPGDSLTARGGAGLEVVQGKVWVVYGF--NGCEVDDVHYYDPVQDKWTQVEtfgvrPSERSVFASAAIGKH--I 380
Cdd:PHA03098 369 KW---REEPPLIFPRYNPCVVNVNNLIYVIGGIskNDELLKTVECFSLNTNKWSKGS-----PLPISHYGGCAIYHDgkI 440


                 ....*
gi 18401116  381 VIFGG 385
Cdd:PHA03098 441 YVIGG 445
Kelch_3 pfam13415
Galactose oxidase, central domain;
228-277 5.03e-09

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 51.91  E-value: 5.03e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 18401116   228 GSTLYVFGGRDASRQ--YNGFYSFDTTTNEWKlltPVEEGPTPRSFHSMAAD 277
Cdd:pfam13415   1 GDKLYIFGGLGFDGQtrLNDLYVYDLDTNTWT---QIGDLPPPRSGHSATYI 49
PHA03098 PHA03098
kelch-like protein; Provisional
 166-356 5.95e-09

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 58.24  E-value: 5.95e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  166 RCSHGIAQVGNKIYSFGGEFTPNQPIDKhLYVFDLETRTWsispatGDVPHL----SCLGVrmVSVGSTLYVFGGRDASR 241
Cdd:PHA03098 285 VYCFGSVVLNNVIYFIGGMNKNNLSVNS-VVSYDTKTKSW------NKVPELiyprKNPGV--TVFNNRIYVIGGIYNSI 355

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  242 QYNGFYSFDTTTNEWKLLTPVEEgptPRSFHSMAADEENVYVFGGVSAT-ARLNTLDSYNIVDKKWFHCSTPGDSLTarg 320
Cdd:PHA03098 356 SLNTVESWKPGESKWREEPPLIF---PRYNPCVVNVNNLIYVIGGISKNdELLKTVECFSLNTNKWSKGSPLPISHY--- 429

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 18401116  321 GAGLEVVQGKVWVVYGF----NGCEVDDVHYYDPVQDKWT 356
Cdd:PHA03098 430 GGCAIYHDGKIYVIGGIsyidNIKVYNIVESYNPVTNKWT 469
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 318-358 1.53e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 44.91  E-value: 1.53e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 18401116   318 ARGGAGLEVVQGKVWVVYGFNG-CEVDDVHYYDPVQDKWTQV 358
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGnQSLNSVEVYDPETNTWSKL 42
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 219-261 7.87e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 42.98  E-value: 7.87e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 18401116   219 CLGVRMVSVGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTP 261
Cdd:pfam01344   2 RSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPS 44
Kelch_6 pfam13964
Kelch motif;
166-206 1.74e-05

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 41.94  E-value: 1.74e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 18401116   166 RCSHGIAQVGNKIYSFGGEFTPNQPIDKhLYVFDLETRTWS 206
Cdd:pfam13964   2 RTFHSVVSVGGYIYVFGGYTNASPALNK-LEVYNPLTKSWE 41
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 166-209 4.18e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 40.67  E-value: 4.18e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 18401116   166 RCSHGIAQVGNKIYSFGGeFTPNQPIDKhLYVFDLETRTWSISP 209
Cdd:pfam01344   2 RSGAGVVVVGGKIYVIGG-FDGNQSLNS-VEVYDPETNTWSKLP 43
Kelch_4 pfam13418
Galactose oxidase, central domain;
166-210 4.40e-05

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 40.67  E-value: 4.40e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 18401116   166 RCSHGIAQVGN-KIYSFGGEFTPNQPIDkHLYVFDLETRTWSISPA 210
Cdd:pfam13418   2 RAYHTSTSIPDdTIYLFGGEGEDGTLLS-DLWVFDLSTNEWTRLGS 46
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 268-306 6.44e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 40.29  E-value: 6.44e-05
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 18401116   268 PRSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKW 306
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTW 39
PRK14131 PRK14131
N-acetylneuraminate epimerase;
224-417 9.06e-05

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 44.62  E-value: 9.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  224 MVSVGSTLYVFGG-----RDASRQ-YNGFYSFDTTTNEW-KLLTpveegPTPRSF---HSMAADEENVYVFGGVSatarL 293
Cdd:PRK14131  80 AAFIDGKLYVFGGigktnSEGSPQvFDDVYKYDPKTNSWqKLDT-----RSPVGLaghVAVSLHNGKAYITGGVN----K 150

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  294 NTLDSY----NIVDKKwfhcSTPGDSLTARggaglevVQGKVWVVYGFNgcevDDVHYYDPVQDKWtqvETFGVRP-SER 368
Cdd:PRK14131 151 NIFDGYfedlAAAGKD----KTPKDKINDA-------YFDKKPEDYFFN----KEVLSYDPSTNQW---KNAGESPfLGT 212

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 18401116  369 SVFASAAIGKHIVIFGGEIAmdplahvgPGQLTDGTFALDT--ETLQWERL 417
Cdd:PRK14131 213 AGSAVVIKGNKLWLINGEIK--------PGLRTDAVKQGKFtgNNLKWQKL 255
Kelch_6 pfam13964
Kelch motif;
268-310 1.69e-04

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 39.24  E-value: 1.69e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 18401116   268 PRSFHSMAADEENVYVFGG-VSATARLNTLDSYNIVDKKWFHCS 310
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVFGGyTNASPALNKLEVYNPLTKSWEELP 44
Kelch smart00612
Kelch domain;
231-276 2.56e-04

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 38.69  E-value: 2.56e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 18401116    231 LYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVeegPTPRSFHSMAA 276
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSM---PTPRSGHGVAV 44
Kelch_6 pfam13964
Kelch motif;
224-269 3.64e-04

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 38.09  E-value: 3.64e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 18401116   224 MVSVGSTLYVFGGR-DASRQYNGFYSFDTTTNEWKLLTPVeegPTPR 269
Cdd:pfam13964   7 VVSVGGYIYVFGGYtNASPALNKLEVYNPLTKSWEELPPL---PTPR 50
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
155-256 6.89e-04

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 41.29  E-value: 6.89e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116 155 KVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIdkhlYVFDLETRTWSispATGDVPHlSCLGVRMVSVGSTLYVF 234
Cdd:COG3055 186 TWTTLAPLPTARAGHAAAVLGGKILVFGGESGFSDEV----EAYDPATNTWT---ALGELPT-PRHGHAAVLTDGKVYVI 257

                        90       100
                ....*....|....*....|..
gi 18401116 235 GGRDAsrqyNGFYSFDTTTNEW 256
Cdd:COG3055 258 GGETK----PGVRTPLVTSAEV 275
PRK14131 PRK14131
N-acetylneuraminate epimerase;
275-385 1.73e-03

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 40.38  E-value: 1.73e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18401116  275 AADEENVYVFGGVSATA--RLNTLDSynivDKKWFHCST-PGdslTARGGAGLEVVQGKVWVVYGFNGCE-------VDD 344
Cdd:PRK14131  35 AIDNNTVYVGLGSAGTSwyKLDLNAP----SKGWTKIAAfPG---GPREQAVAAFIDGKLYVFGGIGKTNsegspqvFDD 107

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 18401116  345 VHYYDPVQDKWTQVETfgvRPSERSVFASAAI--GKHIVIFGG 385
Cdd:PRK14131 108 VYKYDPKTNSWQKLDT---RSPVGLAGHVAVSlhNGKAYITGG 147
Kelch_2 pfam07646
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 166-210 2.45e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 462220 [Multi-domain]  Cd Length: 47  Bit Score: 35.77  E-value: 2.45e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 18401116   166 RCSHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPA 210
Cdd:pfam07646   2 RYPHASSVPGGKLYVVGGSDGLGDLSSSDVLVYDPETNVWTEVPR 46
Kelch smart00612
Kelch domain;
281-329 3.34e-03

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 35.61  E-value: 3.34e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 18401116    281 VYVFGGVSATARLNTLDSYNIVDKKWfhcsTPGDSL-TARGGAGLEVVQG 329
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKW----TPLPSMpTPRSGHGVAVING 47
Kelch_4 pfam13418
Galactose oxidase, central domain;
268-306 3.69e-03

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 35.28  E-value: 3.69e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 18401116   268 PRSFHSMAADEEN-VYVFGG-VSATARLNTLDSYNIVDKKW 306
Cdd:pfam13418   1 PRAYHTSTSIPDDtIYLFGGeGEDGTLLSDLWVFDLSTNEW 41
Kelch_4 pfam13418
Galactose oxidase, central domain;
224-262 8.37e-03

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 34.51  E-value: 8.37e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 18401116   224 MVSVGS-TLYVFGGRDASRQ-YNGFYSFDTTTNEWKLLTPV 262
Cdd:pfam13418   7 STSIPDdTIYLFGGEGEDGTlLSDLWVFDLSTNEWTRLGSL 47
Kelch_5 pfam13854
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 266-299 9.10e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 433528 [Multi-domain]  Cd Length: 41  Bit Score: 34.08  E-value: 9.10e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 18401116   266 PTPRSFHSMAADEENVYVFGGVSATARLNTLDSY 299
Cdd:pfam13854   1 PVPRYGHCAVTVGDYIYLYGGYTGGEGQPSDDVY 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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