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Conserved domains on  [gi|18404086|ref|NP_565839|]
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Tubulin/FtsZ family protein [Arabidopsis thaliana]

Protein Classification

cell division protein FtsZ( domain architecture ID 11415192)

cell division protein FtsZ assembles into a Z ring that provides the framework for the cell division apparatus

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
117-468 2.52e-158

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 452.26  E-value: 2.52e-158
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 117 NEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKE 196
Cdd:COG0206  10 LKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 197 VIEEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPND 276
Cdd:COG0206  88 EIREALEGADMVFItagmgggtgTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 277 KLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQS 356
Cdd:COG0206 168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 357 PLLDIG-IERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEGEGRtv 435
Cdd:COG0206 248 PLLEDVsISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEE-- 325
                       330       340       350
                ....*....|....*....|....*....|...
gi 18404086 436 qmvqadaasvgATRRPSSSFRESGSVEIPEFLK 468
Cdd:COG0206 326 -----------ETERPLEETEPAEDLDIPAFLR 347
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
117-468 2.52e-158

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 452.26  E-value: 2.52e-158
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 117 NEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKE 196
Cdd:COG0206  10 LKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 197 VIEEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPND 276
Cdd:COG0206  88 EIREALEGADMVFItagmgggtgTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 277 KLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQS 356
Cdd:COG0206 168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 357 PLLDIG-IERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEGEGRtv 435
Cdd:COG0206 248 PLLEDVsISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEE-- 325
                       330       340       350
                ....*....|....*....|....*....|...
gi 18404086 436 qmvqadaasvgATRRPSSSFRESGSVEIPEFLK 468
Cdd:COG0206 326 -----------ETERPLEETEPAEDLDIPAFLR 347
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
119-423 3.73e-147

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 422.19  E-value: 3.73e-147
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 119 ARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:cd02201   1 AKIKVIGVGGGGGNAVNRMIESGLEGVEFIAINTDAQALEKSKA--PNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEI 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 199 EEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:cd02201  79 KEALKGADMVFItagmgggtgTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPL 358
Cdd:cd02201 159 LEIVGKNLPLLEAFKKADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPL 238
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18404086 359 LDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATG 423
Cdd:cd02201 239 LEDDIKGAKGVLVNITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
115-431 1.81e-123

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 363.94  E-value: 1.81e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   115 NYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARES 194
Cdd:TIGR00065  14 PSNKAKIKVIGVGGGGNNTVNRMLEEGVEGVEFIAINTDAQHLKTTKA--DKKILIGKKLTRGLGAGGNPEIGRKAAEES 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   195 KEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIP 274
Cdd:TIGR00065  92 RDEIRKLLEGADMVFITAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   275 NDKLLTAVSQsTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGK---SRARDAAL 351
Cdd:TIGR00065 172 NDKLLEVVPN-LPLNDAFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVR 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   352 NAIQSPLLD-IGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEG 430
Cdd:TIGR00065 251 KALSSPLLDvDKISGAKGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGVKSQIFF 330

                  .
gi 18404086   431 E 431
Cdd:TIGR00065 331 G 331
PRK13018 PRK13018
cell division protein FtsZ; Provisional
105-428 1.61e-120

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 357.40  E-value: 1.61e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  105 EDFEEPSAPSNYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNP 184
Cdd:PRK13018  15 EKEEKKASDDDFGNPKIVVVGCGGAGNNTINRLYEIGIEGAETIAINTDAQHLAMIKA--DKKILIGKSLTRGLGAGGDP 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  185 EIGMNAARESKEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLR 264
Cdd:PRK13018  93 EVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLR 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  265 DNVDTLIVIPNDKLLTAVsQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKS 344
Cdd:PRK13018 173 EAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQN 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  345 RARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGF 424
Cdd:PRK13018 252 RAMEAVRAALANPLLDVDYRGAKGALVHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDMEGKVRVMVIMTGV 331

                 ....
gi 18404086  425 KRQE 428
Cdd:PRK13018 332 KSAQ 335
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
120-314 5.51e-62

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 200.02  E-value: 5.51e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086    120 RIKVIGVGGGGSNAVNRMIESemSGVEFWIVNTDIQAMRM-SPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:smart00864   1 KIKVFGVGGGGPNAVNVDLEP--GVIDGVRANTDAQALNPeSLA--SGKIQAGNNWTRGLGAGADPEVGREAAEESLDEI 76
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086    199 EEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:smart00864  77 REELEGADGVFITAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDAL 156
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 18404086    279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPG 314
Cdd:smart00864 157 LDICGRKLPLRPAFKDANDLLAQAVSGITDLIRFPG 192
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
331-425 1.54e-33

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 121.93  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   331 GSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPA 410
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLDVDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDPE 80
                          90
                  ....*....|....*
gi 18404086   411 LSGQVSITLIATGFK 425
Cdd:pfam12327  81 LEDEIRVTVVATGID 95
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
117-468 2.52e-158

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 452.26  E-value: 2.52e-158
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 117 NEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKE 196
Cdd:COG0206  10 LKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 197 VIEEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPND 276
Cdd:COG0206  88 EIREALEGADMVFItagmgggtgTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 277 KLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQS 356
Cdd:COG0206 168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 357 PLLDIG-IERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEGEGRtv 435
Cdd:COG0206 248 PLLEDVsISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEE-- 325
                       330       340       350
                ....*....|....*....|....*....|...
gi 18404086 436 qmvqadaasvgATRRPSSSFRESGSVEIPEFLK 468
Cdd:COG0206 326 -----------ETERPLEETEPAEDLDIPAFLR 347
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
119-423 3.73e-147

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 422.19  E-value: 3.73e-147
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 119 ARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:cd02201   1 AKIKVIGVGGGGGNAVNRMIESGLEGVEFIAINTDAQALEKSKA--PNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEI 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 199 EEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:cd02201  79 KEALKGADMVFItagmgggtgTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPL 358
Cdd:cd02201 159 LEIVGKNLPLLEAFKKADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPL 238
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18404086 359 LDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATG 423
Cdd:cd02201 239 LEDDIKGAKGVLVNITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
115-431 1.81e-123

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 363.94  E-value: 1.81e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   115 NYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARES 194
Cdd:TIGR00065  14 PSNKAKIKVIGVGGGGNNTVNRMLEEGVEGVEFIAINTDAQHLKTTKA--DKKILIGKKLTRGLGAGGNPEIGRKAAEES 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   195 KEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIP 274
Cdd:TIGR00065  92 RDEIRKLLEGADMVFITAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   275 NDKLLTAVSQsTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGK---SRARDAAL 351
Cdd:TIGR00065 172 NDKLLEVVPN-LPLNDAFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVR 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   352 NAIQSPLLD-IGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEG 430
Cdd:TIGR00065 251 KALSSPLLDvDKISGAKGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGVKSQIFF 330

                  .
gi 18404086   431 E 431
Cdd:TIGR00065 331 G 331
PRK13018 PRK13018
cell division protein FtsZ; Provisional
105-428 1.61e-120

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 357.40  E-value: 1.61e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  105 EDFEEPSAPSNYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNP 184
Cdd:PRK13018  15 EKEEKKASDDDFGNPKIVVVGCGGAGNNTINRLYEIGIEGAETIAINTDAQHLAMIKA--DKKILIGKSLTRGLGAGGDP 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  185 EIGMNAARESKEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLR 264
Cdd:PRK13018  93 EVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLR 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  265 DNVDTLIVIPNDKLLTAVsQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKS 344
Cdd:PRK13018 173 EAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQN 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086  345 RARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGF 424
Cdd:PRK13018 252 RAMEAVRAALANPLLDVDYRGAKGALVHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDMEGKVRVMVIMTGV 331

                 ....
gi 18404086  425 KRQE 428
Cdd:PRK13018 332 KSAQ 335
FtsZ_CetZ-like cd02191
Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is ...
119-423 5.83e-64

Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. CetZ-like proteins are related to tubulin and FtsZ and co-exists with FtsZ in many archaea. However, a recent study found that Cetz proteins (formerly annotated FtsZ type 2) are not required for cell division. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276960 [Multi-domain]  Cd Length: 308  Bit Score: 209.34  E-value: 5.83e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 119 ARIKVIGVGGGGSNAVNRM----IE-SEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARE 193
Cdd:cd02191   1 AKIVVIGVGQAGGNLASALqsfdREtGFGAGVETVAINTAAQDLKSLKA--KETLLIGQDRTNGHGVGGNPELGAQAAEE 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 194 SKEVIEEALYG---SDMVFVTAGMGGGTGTGAAPVIAGIAKAMGI-LTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDT 269
Cdd:cd02191  79 DQEEIMEALEGrveADMIFVTTGLGGGTGSGGAPVLAEALKKVYDvLTVAVVTLPFADEGALYMQNAGEGLRTLAEEADA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 270 LIVIPNDKLLTAVSqstPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKS-RARD 348
Cdd:cd02191 159 LILVDNEKLRSIGG---SLSEAYDAINEVLARRVGGLLEAIEATGLSVVDFADVKTVMNSGGMAMLGYGSADASInRARE 235
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18404086 349 AALNAIQSPLLDIGIERATGIVWNITGGSD-LTLFEVNAAAEVIYDLVDpTANLIFGAVVDPalSGQVSITLIATG 423
Cdd:cd02191 236 ATRRALRTPLLLPDASGADGALVVIAGEPDtLPLKEVERVRRWVEDETG-SATVRGGDVIDE--SGRLRVLVVLTG 308
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
120-314 5.51e-62

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 200.02  E-value: 5.51e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086    120 RIKVIGVGGGGSNAVNRMIESemSGVEFWIVNTDIQAMRM-SPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:smart00864   1 KIKVFGVGGGGPNAVNVDLEP--GVIDGVRANTDAQALNPeSLA--SGKIQAGNNWTRGLGAGADPEVGREAAEESLDEI 76
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086    199 EEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:smart00864  77 REELEGADGVFITAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDAL 156
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 18404086    279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPG 314
Cdd:smart00864 157 LDICGRKLPLRPAFKDANDLLAQAVSGITDLIRFPG 192
Tubulin_C smart00865
Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and ...
316-426 1.02e-37

Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.


Pssm-ID: 214868 [Multi-domain]  Cd Length: 120  Bit Score: 133.83  E-value: 1.02e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086    316 VNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLD-IGIERATGIVWNITGGSDLTLFEVNAAAEVIYDL 394
Cdd:smart00865   1 INVDFADVKTVMVPMGFAMMGIGPASGENRALEAAELAISSPLLEdSNIMGAKGVLVNITGGPDLTLKEVNEAMERIREK 80
                           90       100       110
                   ....*....|....*....|....*....|...
gi 18404086    395 VDPTANLIFGAVVDPALSG-QVSITLIATGFKR 426
Cdd:smart00865  81 ADPDAFIIWGPVIDEELGGdEIRVTVIATGIGS 113
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
331-425 1.54e-33

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 121.93  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   331 GSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPA 410
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLDVDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDPE 80
                          90
                  ....*....|....*
gi 18404086   411 LSGQVSITLIATGFK 425
Cdd:pfam12327  81 LEDEIRVTVVATGID 95
Tubulin pfam00091
Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma ...
131-279 3.94e-26

Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.


Pssm-ID: 459669 [Multi-domain]  Cd Length: 190  Bit Score: 104.61  E-value: 3.94e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   131 SNAVNRMIE---------------SEMSGVEFW----IVNTDIQAMRMSPV-LPDNRLQIGKELTRGLGAGGNPEIGMNA 190
Cdd:pfam00091  12 NNIGNALWEllclehgidslnvffSESGSVEFIprslAIDTDPQALNEIKAgFNPNKILLGKEGTGGNGAGGYPEIGREA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086   191 ARESKEVIEEALYGSDM---VFVTAGMGGGTGTGAAPVIAGIAKAM--GILTVGIATTPFSF-EGRRRTVQAQEGLASLR 264
Cdd:pfam00091  92 AEESLEEIRKEVEGCDMlqgFFITASLGGGTGSGAAPVIAEILKELypGALTVAVVTFPFGFsEGVVRPYNAILGLKELI 171
                         170
                  ....*....|....*
gi 18404086   265 DNVDTLIVIPNDKLL 279
Cdd:pfam00091 172 EHSDSVIVIDNDALY 186
Tubulin_FtsZ_Cetz-like cd00286
Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, ...
144-423 5.02e-14

Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, gamma-, delta-, epsilon, and zeta-tubulins as well as FtsZ and CetZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts. A recent study found that CetZ proteins, formerly annotated FtsZ type 2, are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276954 [Multi-domain]  Cd Length: 332  Bit Score: 72.83  E-value: 5.02e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 144 GVEFW----IVNT---DIQAMRMSPVL----PDNRLQIGKeltrGLGAGGNPEIGMNAA-RESKEVIEEAL-------YG 204
Cdd:cd00286  15 GAAFWeqavLVDLepaVLDELLSGPLRqlfhPENIILIQK----YHGAGNNWAKGHSVAgEEYQEEILDAIrkeveecDE 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 205 SDMVFVTAGMGGGTGTGAAPVIAGIAKAM--GILTVGIATTPFSFEGRR-RTVQAQEGLASLRDNVDTLIVIPNDKLLTA 281
Cdd:cd00286  91 LQGFFITHSLGGGTGSGLGPLLAERLKDEypNRLVVTFSILPGPDEGVIvYPYNAALTLKTLTEHADCLLLVDNEALYDI 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 282 VSQST-PVTEAFNLADDILRQGVRGISDIITIPGLVNVDF---ADVRAIMANAGSSLMGIGTATGKS-------RARDAA 350
Cdd:cd00286 171 CPRPLhIDAPAYDHINELVAQRLGSLTEALRFEGSLNVDLrelAENLVPLPRGHFLMLGYAPLDSATsatprslRVKELT 250
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 351 LNAIQSPLLDIG----IERATGIVWNITGGSDLTLFEVNAAAEVIYD-----LVDPTANLIFGAVVDPALSGQVSITLIA 421
Cdd:cd00286 251 RRAFLPANLLVGcdpdHGEAIAALLVIRGPPDLSSKEVERAIARVKEtlghlFSWSPAGVKTGISPKPPAEGEVSVLALL 330

                ..
gi 18404086 422 TG 423
Cdd:cd00286 331 NS 332
CetZ_tubulin-like cd02202
Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct ...
150-341 2.47e-09

Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct tubulin/FtsZ family. The crystal structures of CetZ contain the FtsZ/tubulin superfamily fold and its family members have mosaic of tubulin-like and FtsZ-like amino acid residues. However, a recent study found that CetZ proteins (formerly annotated FtsZ type 2) are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276962 [Multi-domain]  Cd Length: 357  Bit Score: 58.79  E-value: 2.47e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 150 VNTDIQA-MRMSPVLPDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVIEEAL-----YGSDMVFVTAGMGGGTGTGAA 223
Cdd:cd02202  37 VNTDRADlSGLDHIPEERRILIGDTETGGHGVGGDNELGAEVAEEDIDELLRALdtapfSEADAFLVVAGLGGGTGSGAA 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18404086 224 PVIAGIAKAMGILTV-GIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKLLTAvsqSTPVTEAFNLADDILRQG 302
Cdd:cd02202 117 PVLAEELKERYDKPVyALGVLPAAEEGGRYALNAARSLRSLVELADAVILFDNDAWRRS---GESIAEAYDRINEEIAER 193
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 18404086 303 VR-----GISDIITIPGLVNVDFADVRAIMANAGssLMGIGTAT 341
Cdd:cd02202 194 LGallaaGEVDAPKSVGESVLDASDIINTLSGGG--VATIGYAS 235
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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